Metagenome / Metatranscriptome Family F097411

Basic Information
Family ID	F097411
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	58 residues
Representative Sequence	VPESGRIEGMSWCRHFDRPIDHRLVKEDRPACIEERNGCGNCPESTYRVRRLPDR
Number of Associated Samples	67
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (99.038 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (50.962 % of family members)
Environment Ontology (ENVO)	Unclassified (96.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (59.615 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 14.55% Coil/Unstructured: 85.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01402	RHH_1	8.74
PF09853	DUF2080	2.91
PF00805	Pentapeptide	0.97
PF08275	Toprim_N	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.97
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.97

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
All Organisms	root	All Organisms	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
cellular organisms	root	All Organisms → cellular organisms	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.04 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Scaffold	Taxonomy	Length	IMG/M Link
3300027510\|Ga0209537_1011999	All Organisms → cellular organisms → Archaea	5057	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	96.15%
Environmental	Environmental	3.85%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	58.65%
Bioreactor	Engineered → Bioreactor	17.31%
Biotransformation	Engineered → Biotransformation	9.62%
Solid Waste	Engineered → Solid Waste	7.69%
Aquatic	Environmental → Aquatic	3.85%
Unclassified	Engineered → Unclassified	1.92%
Built Environment	Engineered → Built Environment	0.96%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	58.65%
Anaerobic	Engineered → Bioreactor → Anaerobic	17.31%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	8.65%
Landfill	Engineered → Solid Waste → Landfill	4.81%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Grass	Engineered → Solid Waste → Grass	2.88%
Unclassified	Engineered → Unclassified → Unclassified	1.92%
Marine	Environmental → Aquatic → Marine	0.96%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	0.96%
Unclassified	Engineered → Biotransformation → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	58.65%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	17.31%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	8.65%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	4.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.88%
Composting	Engineered → Solid Waste → Grass → Composting	2.88%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	1.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.96%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	0.96%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	58.65%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	17.31%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	8.65%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	4.81%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	2.88%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	1.92%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.96%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	50.96%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	17.31%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	8.65%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	4.81%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	2.88%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	2.88%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	2.88%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	1.92%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	1.92%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	1.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.96%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.96%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	0.96%
Biogas Reactor	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor	0.96%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered	Open in IMG/M
3300002837	Biogas reactor microbial communities from SLU, Sweden, that are enriched on cellulose - Sample No3 60kmer	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300003667	Lithgow State Coal Mine Metagenomic Study (LSCM 3 Late (Sample 2))	Environmental	Open in IMG/M
3300006360	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Val_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006389	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006398	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006940	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_H2B_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300009121	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.A IDBA	Engineered	Open in IMG/M
3300009360	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.B IBDA	Engineered	Open in IMG/M
3300009362	Syntrophic microbial communities from biogas reactors - R1.C13.But.A IBDA	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009642	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009652	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA	Engineered	Open in IMG/M
3300009656	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300009664	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG2_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009675	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG	Engineered	Open in IMG/M
3300009685	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009688	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaG	Engineered	Open in IMG/M
3300009707	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG	Engineered	Open in IMG/M
3300009708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU001_MetaG	Engineered	Open in IMG/M
3300009780	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010344	AD_JPASca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010347	AD_JPHGca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300012881	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300019203	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNTR2_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025629	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025638	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025677	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025859	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025861	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026198	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026250	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026290	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028564 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant18	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028626	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Phe	Engineered	Open in IMG/M
3300028629	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Leu	Engineered	Open in IMG/M
3300028644	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Asn	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Meso_11958451	2209111018	Solid Waste From Bioreactor	CRHFDRAIDYRLVKEDRPACIEERHGCAGCPESNIPGASGPDR
Meso_4518751	2209111018	Solid Waste From Bioreactor	MSWCRHFDRAIDYRLVKEDRPACIEERHGCAGCPESTYRVRRVPDH
Meso_9894963	2209111018	Solid Waste From Bioreactor	VPESDRIEGMSWCRHFDRAIDHRLVKEDRPACIEERNGCAGCPESTYRVHR
Draft_109894963	3300001975	Biogas Fermenter	VPESDRIEGMSWCRHFDRAIDHRLVKEDRPACIEERNGCAGCPESTYRVHR*
Draft_111958451	3300001975	Biogas Fermenter	SGCRHFDRAIDYRLVKEDRPACIEERHGCAGCPESNIPGASGPDR*
JGI24707J26582_101912671	3300002163	Biogas Fermentantion	MPETEGMSWCRRFDRPIDHRLVKEDRPACIEERNGCGNCPESTYRVHR
JGI24708J26588_100760123	3300002164	Biogas Fermentantion	MPETEGMSWCRRFDRPIDHRLVKEDRPACIEERNGCGNCPESTYRVHRVTDR*
JGI24712J26585_101870333	3300002168	Biogas Fermentantion	MPETEGMSWCRHFDRAIDYRLVKIDRPACIEERNGCGNCPESTYRVHRV
JGI24711J26586_101015443	3300002170	Biogas Fermentantion	MPETEGMSWCRHFDRAIDYRLVKIDRPACIEERNGCGXCPESTYRVHRVTDR*
JGI24711J26586_101691631	3300002170	Biogas Fermentantion	RLAAVEAWGVVMNRVPESGRIEGMSWCXHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRVPDR*
JGI24709J26583_101641653	3300002173	Biogas Fermentantion	MPETEGMSWCRHFDRAIDCRLVKIDRPPCIEERHGCAG
JGI24710J26742_100653914	3300002174	Biogas Fermentantion	VPESDRIEGMSWCRHFDRAIDHRLVKEDRPACIEERNGCAGCPESTYRVHRVTDR*
JGI24710J26742_101724131	3300002174	Biogas Fermentantion	HFDRAIDYRLVKEDRPACIEERHGCAGCPESTYRVHRVTDR*
bg3kmer60_10981593	3300002837	Biogas Reactor	MPETEGMSWCRHFDRAIDCRLVKIDRPPCIEERHGCAGCPESTYRVH
draft_104440192	3300002898	Biogas Fermenter	MPETEGMSWCRHFDRAIDYRLVKIDRPACIEERNGCGNCPESTYRVRRGPDR*
draft_105141351	3300002898	Biogas Fermenter	VPESGRIEGMSWCRRFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVHRVTDR*
LSCM3L_10228341	3300003667	Coalbed Water	AVEVWGVVMNRVPESGHIEGVSWCRHFDRPIDHHLVKEDRPACIEERHGCGNCPESTYRVRRGPDR*
LSCM3L_10228342	3300003667	Coalbed Water	MPETEGMSWCRHFDRAIDYRLVKEDRPACIEERNGCAGCPESTYRVRRGPDR*
Ga0079079_10345002	3300006360	Anaerobic Digestor Sludge	AAICEVFPGDPERVHLATVRVMEVVLSRVPPSGLEGCAWCRHFDRAIDCRLVKEDRPPCIAKHNGCGNCPESTYRVHRLPDR*
Ga0079064_10659881	3300006389	Anaerobic Digestor Sludge	EVFPGDPERVHLATVRVMEVVLSRVPPSGLEGCAWCRHFDRAIDCRLVKEDRPPCIAKHNGCGNCPESTYRVHRLPDR*
Ga0079067_10468731	3300006398	Anaerobic Digestor Sludge	WCLHFDRPIDHRLVKEDRPACIEERNGCAGCPESTYRVRRLPDR*
Ga0079067_10595612	3300006398	Anaerobic Digestor Sludge	MEVVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVHRVTDR*
Ga0075464_105878721	3300006805	Aqueous	EVVLSRVPPSGLEGCAWCLHFDRPIDHHLVKEDRPACIEERHGCAGCPESTYRVHRVPDR
Ga0079099_10458732	3300006940	Anaerobic Digestor Sludge	RPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR*
Ga0118671_11210291	3300009121	Anaerobic Wastewater Sludge	RVHLATVRVMEVVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVRRGPDR*
Ga0118672_10738981	3300009360	Anaerobic Wastewater Sludge	DRIEGVSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVHRVTDR*
Ga0118672_10766371	3300009360	Anaerobic Wastewater Sludge	DRIEGVSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRVPDH*
Ga0118673_11074401	3300009362	Anaerobic Wastewater Sludge	IDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR*
Ga0118673_11638611	3300009362	Anaerobic Wastewater Sludge	HFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVHRVTDR*
Ga0123327_11220613	3300009607	Anaerobic Biogas Reactor	MPETEGMSWCRHFDRAIDCRLVKIDRPPCIEERHGCGNCPES
Ga0123327_12817011	3300009607	Anaerobic Biogas Reactor	AWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVRRGPDR*
Ga0123331_11537581	3300009642	Anaerobic Biogas Reactor	EVFPGDPERVHLATVRVMEVVLSRVPPSGRIEGMSWCRHFDRPIDHHLVKEDRPACIEERNGCADCPESTYRVHRVTDR*
Ga0123331_11583721	3300009642	Anaerobic Biogas Reactor	AVEAWGVVMNRVPESGRVEGASWCRHFDRPIDHHLVKEDRPACIEERHGCAGCPESTYRVRRGPDR*
Ga0123331_12183091	3300009642	Anaerobic Biogas Reactor	RAIDCRLVKEDRPPCIAKHNGCGNCPESTYRVHRVTDR*
Ga0123326_10776722	3300009647	Anaerobic Biogas Reactor	MPETEGMSWCRHFDRAIDYRLVKIDRPPCIEECNGCGNCPECGYQVSRSG*
Ga0123326_11300882	3300009647	Anaerobic Biogas Reactor	IEGMSWCRHFDRAIDYRLVKEDRPACIEERHGCGNCPESTYRVRRGPDR*
Ga0123326_12191841	3300009647	Anaerobic Biogas Reactor	ATVRVMEVVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVRRGPDR*
Ga0123330_12212881	3300009652	Anaerobic Biogas Reactor	AWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVRRLPDR*
Ga0123330_12549701	3300009652	Anaerobic Biogas Reactor	WCRHFDRPIDHHLVKEDRPACIEERNGCADCPESTYRVHRVTDR*
Ga0123329_12807771	3300009656	Anaerobic Biogas Reactor	IEGMSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRGPDR*
Ga0116188_12492961	3300009658	Anaerobic Digestor Sludge	ESDRVRLAAVEVWGVVMNRVPESGRIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR*
Ga0123328_10993072	3300009659	Anaerobic Biogas Reactor	RHFDRAIDCRLVKIDRPPCIEERHGCAGCPESTYRVQRVTDR*
Ga0123328_12134231	3300009659	Anaerobic Biogas Reactor	FDRPIDHHLVKEDRPACIEERHGCAGCPESTYRVRRGPDR*
Ga0123328_13806391	3300009659	Anaerobic Biogas Reactor	IPVPESGRIEGMSWCRHFDRAIDCRLVKIDRPPCIEERHGCAGCPESTYRVRRGPDH*
Ga0116146_11059673	3300009664	Anaerobic Digestor Sludge	MEVVLSRVPPSGLEGCAWCLHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR*
Ga0116148_10890571	3300009669	Anaerobic Digestor Sludge	MPETEGMSWCLHFDRAIDCRLVKIDRPPCIEERHGCAGCPESTYRVRRVPDR*
Ga0116148_13297081	3300009669	Anaerobic Digestor Sludge	EVFPGDPERVHLATVRVMEVVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVQRVTDR*
Ga0116148_14349751	3300009669	Anaerobic Digestor Sludge	MEVVLSRVPPSGLEGCAWCLHFDRPIDHHLVKEDRPACIEERHGCGNCPESTYRVRRGPDR*
Ga0116183_12472513	3300009670	Anaerobic Digestor Sludge	LATVRVMEVVLSRVPPSGRIEGMSWCRHFDRAIDCRLVKIDRPPCIEECNGCGNCPECGYQVSRSG*
Ga0116149_12097131	3300009675	Anaerobic Digestor Sludge	MPETEGMSWCLHFDRAIDCRLVKIDRPPCIEERHGCGNCPESTYRVHRVTDR*
Ga0116149_14176471	3300009675	Anaerobic Digestor Sludge	RVPESGRIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR*
Ga0116149_14551601	3300009675	Anaerobic Digestor Sludge	HLATVRVMEVVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVQRVTDR*
Ga0116142_101394033	3300009685	Anaerobic Digestor Sludge	VSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR*
Ga0116142_103896481	3300009685	Anaerobic Digestor Sludge	FDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVQRVTDR*
Ga0116144_104881461	3300009687	Anaerobic Digestor Sludge	EVFPGESDRVRLAAVEVWGVVMNRVPESGRIEGVSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRVPDR*
Ga0116144_105188581	3300009687	Anaerobic Digestor Sludge	RVPPSGRIEGMSWCRHFDRAIDCRLVKEDRPACIEERHGCAGCPESTYRVQRVTDR*
Ga0116176_105616801	3300009688	Anaerobic Digestor Sludge	PESGRIEGMSWCLHFDRPIDHRLVKEDRPACIEERNGCAGCPESTYRVRRLPDR*
Ga0116195_10895721	3300009707	Anaerobic Digestor Sludge	GVVMNRVPESGRIEGVSWCRHFDRPIDHHLVKEDRPACIEEHHGCAGCPESTYRVRRVPDR*
Ga0116194_11146872	3300009708	Anaerobic Digestor Sludge	WGVVMNRVPESGRVEGASWCRHFDRPIDHHLVKEDRPACIEEHHGCAGCPESTYRVRRVPDR*
Ga0116156_106053421	3300009780	Anaerobic Digestor Sludge	VEVWGVVMNRVPESGRIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR*
Ga0116250_102706981	3300010340	Anaerobic Digestor Sludge	VPESGRIEGMSWCRHFDRPIDHRLVKEDRPACIEERNGCGNCPESTYRVRRLPDR*
Ga0116243_106376591	3300010344	Anaerobic Digestor Sludge	LAAVEVWGVVMNRVPESGRIEGVSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVKGVPDR*
Ga0116243_107161932	3300010344	Anaerobic Digestor Sludge	ERVHLATVRVMEVVLSRVPESGRIEGMSWCRHFDRPIDHHLVKIDRPPCIEERHGCAGCPESTYRVRRGPDR*
Ga0116243_107777052	3300010344	Anaerobic Digestor Sludge	WCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRGPDR*
Ga0116243_109026931	3300010344	Anaerobic Digestor Sludge	EAAICEVFPGDPERVHLATVRVMEVVLSRVPESGRIEGMSWCLHFDRPIDHRLVKEDRPACIEERHGCGNCPESTYRVHRVTDR*
Ga0116239_102939602	3300010346	Anaerobic Digestor Sludge	VRLAAVEVWGVVMNRVPESGHIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR*
Ga0116239_104142182	3300010346	Anaerobic Digestor Sludge	PGDPERVHLATVRVMEVVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVHRVTDR*
Ga0116239_107950601	3300010346	Anaerobic Digestor Sludge	MPETEGMSWCRRFDRPIDHRLVKEDRPACIEERHGCGNCPESTYRVHRVTDR*
Ga0116239_108157131	3300010346	Anaerobic Digestor Sludge	PGDPERVHLATVRVMEVVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVQRVTDR*
Ga0116239_108926311	3300010346	Anaerobic Digestor Sludge	GLEGCAWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRGPDR*
Ga0116238_100569674	3300010347	Anaerobic Digestor Sludge	MPETEGMSWCRHFDRAIDYRLVKIDRPPCIEERHGCAGCPESTYRVHRATDR*
Ga0116248_107286171	3300010351	Anaerobic Digestor Sludge	IDCRLVKIDRPPCIEERHGCAGCPESTYRVRRVPDR*
Ga0116237_100678543	3300010356	Anaerobic Digestor Sludge	EGCAWCLHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR*
Ga0116237_102442521	3300010356	Anaerobic Digestor Sludge	VFPDAPDRVRLAAVEVWGVVMNRVPESGHIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR*
Ga0116249_100719731	3300010357	Anaerobic Digestor Sludge	IEGVSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR*
Ga0116249_103529873	3300010357	Anaerobic Digestor Sludge	VVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERNGCAGCPESTYRVRRLPDR*
Ga0079063_10101771	3300012881	Anaerobic Digestor Sludge	SGLEGCAWCLHFDRPIDHRLVKEDRPACIEERHGCGNCPESTYRVHRVTDR*
Ga0172377_112596211	3300014206	Landfill Leachate	IREVFPGEPDRVRLAAVKVWGIVMSRVPASDRIEGMSWCRHFDRAIDYRLVKIDRPPCIEERNGCGNCPESTYRVHRVTDR*
Ga0172377_114668911	3300014206	Landfill Leachate	AVKVWGIVMSRVPASDRIEGVSWCRHFDRPIDHRLVKEDRPACIEERNGCAGCPESTYRVRRGSGR*
Ga0172382_111319031	3300015214	Landfill Leachate	LSRVPPSGLEGCAWCRHFDRPIDHRLVKEDRPACIEERHGCAGCPESTYRVHRVTDR*
Ga0179955_11303731	3300019203	Anaerobic Digestor Sludge	RVMEVVLSRVPESGRIEGMSWCLHFDRAIDCRLVKIDRPPCIEERHGCAGCPESTYRVHRVTDR
Ga0208693_10186771	3300025618	Anaerobic Digestor Sludge	MPESVRVEGVPWCRHFDRAIDYRLVKEDRPACIEERNGCGNCPESTYRVKGVPDR
Ga0208824_10561502	3300025629	Anaerobic Digestor Sludge	VFPGESDRVRLAAVEVWGVVMNRVPPSGLEGCAWCLHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR
Ga0208198_10159898	3300025638	Anaerobic Digestor Sludge	MPETEGMSWCRHFDRAIDYRLVKIDRPPCIEERHGCAGCPESTYRVHRATDR
Ga0208823_10509182	3300025657	Anaerobic Digestor Sludge	EGMSWCRHFDRPIDHRLVKEDRPACIEERNGCGNCPESTYRVRRLPDR
Ga0209719_10221076	3300025677	Anaerobic Digestor Sludge	MPETEGMSWCRHFDRAIDYRLVKIDRPPCIEECNGCGNCPECGYQVSRSG
Ga0209719_11110163	3300025677	Anaerobic Digestor Sludge	MPETEGMSWCLHFDRPIDHRLVKEDRPACIEERNGCGNCPESTYRV
Ga0209719_11518451	3300025677	Anaerobic Digestor Sludge	GDPERVHLATVRVMEVVLSRVPESGRIEGMSWCLHFDRPIDHRLVKEDRPACIEERHGCGNCPESTYRVHRVTDR
Ga0209718_11792191	3300025682	Anaerobic Digestor Sludge	IEGVSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR
Ga0208564_11375881	3300025683	Anaerobic Digestor Sludge	HFDRPIDHRLVKEDRPACIEERNGCGNCPESTYRVRRLPDR
Ga0208564_11663181	3300025683	Anaerobic Digestor Sludge	PESGRIEGMSWCRHFDRPIDHRLVKEDRPACIEERNGCGNCPESTYRVRRLPDR
Ga0209606_10517694	3300025730	Anaerobic Digestor Sludge	PGDPERAHLATVRVMEVVLSRVPESGRIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR
Ga0209096_12444361	3300025859	Anaerobic Digestor Sludge	FPDAPDRVRLAAVEVWGVVMNRVPESGHIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR
Ga0209605_12837681	3300025861	Anaerobic Digestor Sludge	PGESDRVRLAAVEVWGIVMSRVPASDRIEGVSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR
Ga0209313_10772601	3300026198	Anaerobic Biogas Reactor	GDPERVHLATVRVMEVVLSRVPPSGLEGCAWCRHFDRAIDCRLVKEDRPPCIAKHNGCGNCPESTYRVHRLPDR
Ga0209612_11413261	3300026250	Anaerobic Biogas Reactor	LATVRVMEVVLSRVPPSGRIEGMSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRGPDR
Ga0209510_11686332	3300026290	Anaerobic Biogas Reactor	DAIRGVFPDAPDRVRLAAVEVWGVVMNRVPESGHIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRGPDR
Ga0209723_12976101	3300026311	Anaerobic Biogas Reactor	EEAFPGDDRVRAAAVKVWGIIMSRVPASDRIEGVSWCLHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR
Ga0209537_10119995	3300027510	Biogas Fermentantion	MPETEGMSWCRHFDRAIDYRLVKIDRPPCIEERHGCAGCPESTCRVHRVTDR
(restricted) Ga0255344_13321021	3300028564	Wastewater	GCAWCLHFDRPIDHRLVKEDRPPCIEERHGCAGCPESTYRVHRVTDR
Ga0265294_101296671	3300028602	Groundwater	RVRAAAVKVWGIVMSRVPASDRIEGVSWCRHFDRPIDHHLVKEDRPACIEERNGCGNCPESTYRVRRLPDR
Ga0302244_10836221	3300028626	Activated Sludge	VFPDAPDRVRLAAVEVWGVVMNRVPESGHIEGVSWCRHFDRPIDHHLVKEDRPACIEEHNGCGNCPESTYRVRRVPDR
Ga0302248_10815051	3300028629	Activated Sludge	GDPERVHLATVRVMEVVLSRVPPSGLEGCAWCLHFDRPIDHRLVKEDRPACIEERNGCAGCPESTYRVRRLPDR
Ga0302238_11406181	3300028644	Activated Sludge	HFDRPIDHRLVKEDRPACIEERHGCGNCPESTYRVRRGPDR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097411

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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