NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F097302

Metagenome / Metatranscriptome Family F097302

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097302
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 106 residues
Representative Sequence MPTVITRSSVTAVRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEVRFGDDLQRAIHEIADSTNRELAERLADLLESAPPALAGRLAAAPRFSDLG
Number of Associated Samples 86
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.73 %
% of genes near scaffold ends (potentially truncated) 39.42 %
% of genes from short scaffolds (< 2000 bps) 93.27 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (50.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(44.231 % of family members)
Environment Ontology (ENVO) Unclassified
(34.615 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.654 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.89%    β-sheet: 7.14%    Coil/Unstructured: 41.96%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF07992Pyr_redox_2 43.27
PF06253MTTB 16.35
PF01266DAO 4.81
PF13450NAD_binding_8 1.92
PF00293NUDIX 0.96
PF13521AAA_28 0.96
PF00107ADH_zinc_N 0.96
PF11106YjbE 0.96
PF02922CBM_48 0.96
PF16576HlyD_D23 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG5598Trimethylamine:corrinoid methyltransferaseCoenzyme transport and metabolism [H] 16.35


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.00 %
UnclassifiedrootN/A50.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_102272736Not Available2054Open in IMG/M
3300000956|JGI10216J12902_104921843All Organisms → cellular organisms → Bacteria1799Open in IMG/M
3300000956|JGI10216J12902_124585109Not Available1216Open in IMG/M
3300004114|Ga0062593_100163880All Organisms → cellular organisms → Bacteria1710Open in IMG/M
3300004114|Ga0062593_100762024All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300004156|Ga0062589_102886962All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes indistinctus502Open in IMG/M
3300004157|Ga0062590_100974736Not Available803Open in IMG/M
3300004157|Ga0062590_102245741All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300004157|Ga0062590_102841782All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300004479|Ga0062595_102098322Not Available550Open in IMG/M
3300004480|Ga0062592_101213657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia706Open in IMG/M
3300004480|Ga0062592_101412740Not Available663Open in IMG/M
3300004643|Ga0062591_101433010All Organisms → cellular organisms → Bacteria → Acidobacteria687Open in IMG/M
3300005356|Ga0070674_101447514Not Available616Open in IMG/M
3300005456|Ga0070678_101213494All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300005543|Ga0070672_100286012Not Available1395Open in IMG/M
3300005618|Ga0068864_100038646All Organisms → cellular organisms → Bacteria4077Open in IMG/M
3300005719|Ga0068861_100918730Not Available830Open in IMG/M
3300006574|Ga0074056_11556701Not Available572Open in IMG/M
3300009098|Ga0105245_11310646All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha773Open in IMG/M
3300009176|Ga0105242_12559571Not Available559Open in IMG/M
3300009553|Ga0105249_10481499Not Available1284Open in IMG/M
3300009553|Ga0105249_13279572Not Available521Open in IMG/M
3300009789|Ga0126307_10088188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2451Open in IMG/M
3300009840|Ga0126313_10180518All Organisms → cellular organisms → Bacteria1612Open in IMG/M
3300010036|Ga0126305_10300108Not Available1043Open in IMG/M
3300010037|Ga0126304_10454264Not Available858Open in IMG/M
3300010166|Ga0126306_10563453Not Available905Open in IMG/M
3300010371|Ga0134125_12479578Not Available564Open in IMG/M
3300010375|Ga0105239_13200599Not Available533Open in IMG/M
3300010397|Ga0134124_10086054All Organisms → cellular organisms → Bacteria → Proteobacteria2711Open in IMG/M
3300010397|Ga0134124_10855269Not Available913Open in IMG/M
3300011400|Ga0137312_1004037Not Available1561Open in IMG/M
3300011444|Ga0137463_1352547Not Available528Open in IMG/M
3300012212|Ga0150985_110244027All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300012469|Ga0150984_100514759All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300012469|Ga0150984_116704983Not Available644Open in IMG/M
3300012901|Ga0157288_10015210Not Available1374Open in IMG/M
3300012901|Ga0157288_10389700Not Available517Open in IMG/M
3300012903|Ga0157289_10368279All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300012907|Ga0157283_10159937All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300012907|Ga0157283_10213514Not Available617Open in IMG/M
3300012909|Ga0157290_10483175Not Available502Open in IMG/M
3300012910|Ga0157308_10053154All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300012913|Ga0157298_10364527Not Available537Open in IMG/M
3300012916|Ga0157310_10227014All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae694Open in IMG/M
3300012951|Ga0164300_10424984Not Available738Open in IMG/M
3300012955|Ga0164298_10275790Not Available1028Open in IMG/M
3300012958|Ga0164299_10093861Not Available1541Open in IMG/M
3300012961|Ga0164302_11384993Not Available573Open in IMG/M
3300012985|Ga0164308_10689451All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300012986|Ga0164304_10303939All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300012987|Ga0164307_11031341Not Available671Open in IMG/M
3300012988|Ga0164306_10523783All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha916Open in IMG/M
3300012989|Ga0164305_10188108All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300013296|Ga0157374_10455036All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300013308|Ga0157375_12805538Not Available582Open in IMG/M
3300014325|Ga0163163_11184547All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300015077|Ga0173483_11002175Not Available501Open in IMG/M
3300015200|Ga0173480_10372601All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300015200|Ga0173480_10871930Not Available582Open in IMG/M
3300015371|Ga0132258_12451758All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300017695|Ga0180121_10362720Not Available558Open in IMG/M
3300017965|Ga0190266_11059091All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300018066|Ga0184617_1220842Not Available566Open in IMG/M
3300018465|Ga0190269_11595686Not Available544Open in IMG/M
3300018469|Ga0190270_10868217Not Available916Open in IMG/M
3300018476|Ga0190274_12363114All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300019257|Ga0180115_1082065All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300019361|Ga0173482_10718825All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300019362|Ga0173479_10218469Not Available817Open in IMG/M
3300020003|Ga0193739_1169707Not Available510Open in IMG/M
3300020005|Ga0193697_1035780All Organisms → cellular organisms → Bacteria1242Open in IMG/M
3300020016|Ga0193696_1133052Not Available624Open in IMG/M
3300022756|Ga0222622_10253413All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300022883|Ga0247786_1047131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces868Open in IMG/M
3300024055|Ga0247794_10135974Not Available758Open in IMG/M
3300025923|Ga0207681_10447847Not Available1050Open in IMG/M
3300025937|Ga0207669_11560558Not Available563Open in IMG/M
3300025940|Ga0207691_10292290Not Available1401Open in IMG/M
3300025961|Ga0207712_11483458Not Available607Open in IMG/M
3300026041|Ga0207639_11841269Not Available566Open in IMG/M
3300026121|Ga0207683_11008426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii773Open in IMG/M
3300026121|Ga0207683_11210055All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300027876|Ga0209974_10114068All Organisms → cellular organisms → Bacteria → Acidobacteria953Open in IMG/M
3300028708|Ga0307295_10032228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1317Open in IMG/M
3300028754|Ga0307297_10213284All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300028768|Ga0307280_10036718All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300028768|Ga0307280_10108726All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300028802|Ga0307503_10155076All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha1044Open in IMG/M
3300028803|Ga0307281_10009757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2654Open in IMG/M
3300028803|Ga0307281_10010198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2604Open in IMG/M
3300028814|Ga0307302_10158187All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300028819|Ga0307296_10422499Not Available729Open in IMG/M
3300028819|Ga0307296_10516054All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300028876|Ga0307286_10145195All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300028876|Ga0307286_10212268Not Available704Open in IMG/M
3300030990|Ga0308178_1074296All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300031081|Ga0308185_1047765Not Available547Open in IMG/M
3300031226|Ga0307497_10611963All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300031854|Ga0310904_10360115All Organisms → cellular organisms → Bacteria → Acidobacteria941Open in IMG/M
3300032075|Ga0310890_10787703All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae752Open in IMG/M
3300032211|Ga0310896_10863722Not Available522Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil44.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil9.62%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.88%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.92%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.96%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.96%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011400Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019257Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031081Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10227273623300000956SoilVTTARISAGEASEVERNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAESANRQLAERLADLLDSAPPALAGRLAAAPRFSDLG*
JGI10216J12902_10492184323300000956SoilMPTVITTRSSVTTVRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEVRFGDDLQRAIQEIADSADRELAHRLTDLLDSAPPALAGRLAAAPRFSDLG*
JGI10216J12902_12458510933300000956SoilVTTMRISAGEASEVTRNLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLTRAIQEIAEMADRELAERLTDLLESAPPALAGRLAAAPRFSDLG*
Ga0062593_10016388023300004114SoilMPTVITRSSVTAVTISAGEASEVKRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG*
Ga0062593_10076202423300004114SoilRISAGDASEVERNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAETANRQLAERLADLLDTAPPALAGRLAAAPRFSDLG*
Ga0062589_10288696213300004156SoilMPTVITRSSVTTVRISPTEPSEVSRSLHAAYARERIEEVLRAVVEDALSPSRVDVLPWHDDVRFGDDLQRAIQEIADSADRELAERLADLLETAPPALAGRLAAAP
Ga0062590_10097473613300004157SoilMPTVITTRSSVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0062590_10224574113300004157SoilVTAVTISAGEASEVKRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG*
Ga0062590_10284178213300004157SoilVTTVRISTGEASEVERNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAETANRQLAERLADLLDSAPPALAGRLAAAPRFSDLG*
Ga0062595_10209832213300004479SoilMPTVITRSSATIVRISAGDASEVERNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAETANRQLAERLADLLDTAPPALAG
Ga0062592_10121365723300004480SoilVTAVRISAGEASEVRRSLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDQVPFERDLHCVIQEIADTADRQLAERLTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0062592_10141274013300004480SoilVTAVRISAGEAAEVRRNLQAAYARDRIEEVIRAVVEDALSPSRVDVLPWHDEAHFERDLHHVIQEIADTADRELAERLTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0062591_10143301023300004643SoilERNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAETANRQLAERLADLLDTAPPALAGRLAAAPRFSDLG*
Ga0070674_10144751423300005356Miscanthus RhizosphereVTAVRISAGEASEVRRSLQAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEVPFERDLHLVIQEIAETADRQLAERLTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0070678_10121349413300005456Miscanthus RhizosphereVTAVRISAGEASEVTRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG*
Ga0070672_10028601213300005543Miscanthus RhizosphereASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0068864_10003864643300005618Switchgrass RhizosphereVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0068861_10091873023300005719Switchgrass RhizosphereVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDS
Ga0074056_1155670123300006574SoilMPTVITRSSVTAVQISAGEASEVRRSLQAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEIHFERDLHLVIQEIADTADRQLAERLTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0105245_1131064613300009098Miscanthus RhizosphereRRNLQAAYARDRIEEVIRAVVEDALSPSRVDVLPWHDEAHFERDLHHVIQEIADTADRELAERLTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0105242_1255957113300009176Miscanthus RhizosphereMPTVITRSSVTAVQISAGEASEVRRSLQAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEVPFERDLHLVIQEIAETADRQLAERLTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0105249_1048149923300009553Switchgrass RhizosphereMPTVITTRSSVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSD
Ga0105249_1327957223300009553Switchgrass RhizosphereMPTVITRSSVTAVRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEVRFGDDLQRAIHEIADSTNRELAERLADLLESAPPALAGRLAAAPRFSDLG*
Ga0126307_1008818823300009789Serpentine SoilMTAMRISVGEAPQIARGLHAAYARERIEEVIRAVVEDALMPCPADVVPWHDEVRFGDDLQRAIHEIAEMTNDRLAERLTDLLESAPPVLAGRLAAAPRFSDLG*
Ga0126313_1018051823300009840Serpentine SoilMPTMTTRSVTAVRISVGEAPQITRGLHAAYARERIEEVIRAVVEDALMPCPADVVPWHDEVRFGDDLQRAIHEIAEMTNDRLAERLTDLLESAPPVLAGRLAAAPRFSDLG*
Ga0126305_1030010823300010036Serpentine SoilVTAVRISVGEAPQITRGLHAAYARERIEEVIRAVVEDALMPCPADVVPWHDEVRFGDDLQRAIHEIAEMTNDRLAERLTDLLESAPPVLAGRLAAAPRFSDLG*
Ga0126304_1045426423300010037Serpentine SoilMPTMTTRSMTAMRISVGEAPQITRGLHAAYARERIEEVIRAVVEDALMPCPADVVPWHDEVRFGDDLQRAIHEIAEMTNDRLAERLTDLLESAPPVLAGRLAAAPRFSDLG*
Ga0126306_1056345313300010166Serpentine SoilMTAMRISVGEAPQITRGLHAAYARERIEEVIRAVVEDALMPCPADVVPWHDEVRFGDDLQRAIHEIAEMTNDRLAERLTDLLESAPPVLAGRLAAAPRFSDLG*
Ga0134125_1247957813300010371Terrestrial SoilMPTVITRSSVTAVRISAGEASEVKRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG*
Ga0105239_1320059913300010375Corn RhizosphereMPTVMTRSSATAIRISAGDPSEVRRNLQAAYARDRIAEVVRAVVEDALSPSRVDVLPWHDEVRFERDLHLVIEEIADTADRQLAERLTDLLDTAPPALAGRLAAAPRFSDLG
Ga0134124_1008605423300010397Terrestrial SoilMPTVMTRSSATAIRISAGDPSEVRRNLQAAYARDRIAEVVRAVVEDALSPSRVDVLPWHDEVRFERDLHLVIEEIADTADRQLAERLTDLLDTAPPALAGRLAAAPRFSDLG*
Ga0134124_1085526913300010397Terrestrial SoilMPTVITRSSVTAVRISAGEASEVRRSLQAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEVPFERDLHLVIQEIADTADRQLAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0137312_100403713300011400SoilMPTVITRSSLTTVRISAGESSEVTRSLQAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLHRAIREIADTANRQLAESLTDLLESAPPALAGRLAAAPRFSDLG*
Ga0137463_135254713300011444SoilMRRTGGTGWFDADCDHEAVSDGGGVSAGEASEVTRSLHAAYARERIEEVIRAVVEDALSPSRVDVLPWHDEAHFERDLHLVIQEIADTADRQLAERLTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0150985_11024402713300012212Avena Fatua RhizosphereMPTVITRSSATAVRVSTGESPEVTRSLHAAFARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAESTNSELAERLADLLESAPPALAGRLAAAPRFSDLG*
Ga0150984_10051475923300012469Avena Fatua RhizosphereMPTVITRSSATAVRVSAGESPEVTRSLHAAFARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAESTNSELAERLADLLESAPPALAGRLAAAPRFSDLG*
Ga0150984_11670498313300012469Avena Fatua RhizosphereMPTVITRPSATAFPISPGEASELRRSLHAAYARQRIEEVIRAVAEDALSPSRLDVFPWHDQTGFEDDLTRAIEEIAEVVDHELAVRLSDLLESAPPVLAERLAAAPRFTDLG*
Ga0157288_1001521023300012901SoilMPTVMTRSSATAIRISAGDPSEVRRNLQAAYARDRIAEVVRAVVEDALSPSRVDVLPWHDEVRFERDLHLVIEEIADTADRQLAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0157288_1038970013300012901SoilMPTVITRTSVTAVRISAGEASEVKRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTLAIQEIAEGANRQLAERLTDLLE
Ga0157289_1036827923300012903SoilMPTVITRSSATIVRISAGDASEVERNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAETANRQLAERLADLLDTAPPALAGRLAAAPRFSDLG*
Ga0157283_1015993723300012907SoilMPTVITRSSVTAVRISAGEASEVRRSLQAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDQVPFERDLHCVIQEIADTADRQLAERLTDLLESAPPTLAGRLAAAPRFMDHA*
Ga0157283_1021351423300012907SoilMPTVITTRSSVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADLADRELAERLTDLLDS
Ga0157290_1048317513300012909SoilMPTVITRSSVTAVRISAGEASEVTRSLQAAYARQRIEEVIRAVVEDALSPSRVDVLPWHDEIRFEDDLTRAIQEIADGANRQLAERLTDLLETAPPALAGRLAAAPRF
Ga0157308_1005315413300012910SoilRISAGEAAEVRRNLQAAYARDRIEEVIRAVVEDALSPSRVDVLPWHDEAHFERDLHHVIQEIADTADRELAERSTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0157298_1036452713300012913SoilMPTVITRSSVTAVRISAGEASEVRRSLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDQVPFERDLHCVIQEIADTADRQLAERLTDLLESAPPTLAGRLAAAPRFS
Ga0157310_1022701423300012916SoilVRISAGEASEVRRSLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEAHFERDLHHVIQEIADTADRELAERLTDLLESAPPTLAGRLAAAPRFSDLG*
Ga0164300_1042498423300012951SoilMPTVITTRSSVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDDVRFGDDLGRAIHEIAASADRELTERLTDLPDSAPPALAGRLA
Ga0164298_1027579013300012955SoilMPTVITTRSSVTTVRISAREESEVTRSLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEARFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0164299_1009386123300012958SoilMPTVITTRSSVTTVRISAREESEVTRSLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDDVRFGDDLERAIQEIADSADRELTERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0164302_1138499313300012961SoilMPTVITRSSVTAVRISAGVESEVTLNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDDARFGDDLQRAIHEIADSTNRELAERLADLLESAPPTLAGRLAAAPRFS
Ga0164308_1068945123300012985SoilMPTVITTRSSVTTVRISAGEASEVTRSLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERTIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0164304_1030393923300012986SoilVTTVRISAREESEVTRSLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDDVPFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0164307_1103134113300012987SoilMPTVITRSSVTAVRISAGEESEVTRNLHAAYSRERIEEVIRAVVEDALRPARVDVLPWHDDARVGDDLQRAIHVIADSANRELAERLADLLESAPPTLAGRLAAAPRFSDLG*
Ga0164306_1052378313300012988SoilTRSLHAAYSRERIKDVVRAVVEDALSPSRVDVLPWHDDVRFGDDLERAIQEIADSADRELTERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0164305_1018810823300012989SoilMPTVITTRSSVTTVRISAREESEVTRSLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERTIQEIADSADRELTERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0157374_1045503623300013296Miscanthus RhizosphereMPTVITRSSVTAIRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDDARFGDDLERAIHEIADSTNRQLAERIADLLESAPPTLAGRLAAAPRFSDLG*
Ga0157375_1280553813300013308Miscanthus RhizosphereMPTVITTRSSVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLIDSAPPALAGRLAAAPRFSDLG*
Ga0163163_1118454723300014325Switchgrass RhizosphereMPTVITRSSVTAIRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDDARFGDDLERAIHEIADSTNRQLAERIADLLESAPPALAGRLAAAPRFSDLG*
Ga0173483_1100217513300015077SoilMPTVITRTSVTAVRISAGEASEVTRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAG
Ga0173480_1037260123300015200SoilMPTVITRSSVTAVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG*
Ga0173480_1087193013300015200SoilTVMTRSSATAIRISAGDPSEVRRNLQAAYARDRIAEVVRAVVEDALSPSRVDVLPWHDEVRFERDLHLVIEEIADTADRQLAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0173480_1095112013300015200SoilMPTVITRSSVTAVRISAGEAAEVRRNLQAAYARDRIEEVIRAVVEDALSPSRVDVLPWHDEAHFERDLHHVIQEIADTADRELAERLTDL
Ga0132258_1245175823300015371Arabidopsis RhizosphereMPTVITTRSSVTTVRISAGEASEVTRSLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEVRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG*
Ga0180121_1036272013300017695Polar Desert SandEASEVTRSLQAAYARDRIEDVIRAVVEDALNPCPVDVLPWHDEISFGDDLQRAIQEIAESTNRQLAERLTDLLETAPPALAGRLAAAPRFSDLG
Ga0190266_1105909113300017965SoilAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAETTNRQLAERLADLLDSAPPALAGRLAAAPRFSDLG
Ga0184617_122084213300018066Groundwater SedimentMPTVITRSSATAIRVSAGEASEVTRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAESTDTQLAERLADLLESAPPALAGRL
Ga0190269_1159568623300018465SoilISAGESSEVTRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIADGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG
Ga0190270_1086821723300018469SoilVTAVRISAGESSEVTRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIADGANRQLAERLTDLLETAPPGLAGRLAAAPRFSDLG
Ga0190274_1236311413300018476SoilTRTSVTAVRISAGEASEVTRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG
Ga0180115_108206523300019257Groundwater SedimentGERGGSMPTVITRSPATTVRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAETTNRQLAERLADLLDSAPPALAGRLAAAPRFSDLG
Ga0173482_1071882513300019361SoilCGGPGERGGSMPTVITRSSVTAVRISAGEASEVRRSLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDQVPFERDLHCVIQEIADTADRQLAERLTDLLESAPPTLAGRLAAAPRFSDLG
Ga0173479_1021846923300019362SoilMPTVMTRSSATAIRISAGDPSEVRRNLQAAYARDRIAEVVRAVVEDALSPSRVDVLPWHDEVRFERDLHLVIEEIADTADRQLAERLTDLLDSAPPALAGRLAAAPRFSDLG
Ga0193739_116970713300020003SoilVTSVRISAGEASEVTRSLRAAYARDRIEEVVRAVVEDALSPSRVDVLPWHDEIRFEDDLTRAIQEIADTANRQLAERLTDLLESAPPALAGRLAAAPRFSDLG
Ga0193697_103578023300020005SoilMPTVMTRSSATTVRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAETANRQLAERLADLLDSAPPALAGRLAAAPRFSDLG
Ga0193696_113305223300020016SoilMPTVMTRSSATTVRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAETANGQLAERLADLLDSAPPALA
Ga0222622_1025341323300022756Groundwater SedimentMPTVITRSSATAIRVSAGEASEVTRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAETADRQLAERLADLLESAPPALAGRLAAAPRFSDLG
Ga0247786_104713123300022883SoilVTAVRISAGEASEVRRSLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDQVPFERDLHCVIQEIADTADRQLAERLTDLLESAPPTLAGRLAAAPRFSDLG
Ga0247794_1013597423300024055SoilMPTVMTRSSATAIRISAGDPSEVRRNLQAAYARDRIAEVVRAVVEDALSPSRVDVLPWHDEVRFERDLHLVIEEIADTADRQLAERLTDLL
Ga0207681_1044784723300025923Switchgrass RhizosphereVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG
Ga0207669_1156055813300025937Miscanthus RhizosphereMPTVITRSSVTAVRISAGEASEVRRSLQAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEVPFERDLHLVIQEIAETADRQLAERLTDLLESAPPTLAGRLAAAPRFSDLG
Ga0207691_1029229023300025940Miscanthus RhizosphereASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG
Ga0207712_1148345823300025961Switchgrass RhizosphereMPTVITRSSVTAVRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEVRFGDDLQRAIHEIADSTNRELAERLADLLESAPPALAGRLAAAPRFSDLG
Ga0207639_1184126913300026041Corn RhizosphereMPTVITTRSSVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG
Ga0207683_1100842623300026121Miscanthus RhizosphereRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG
Ga0207683_1121005513300026121Miscanthus RhizosphereVTAVRISAGEASEVTRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG
Ga0209974_1011406823300027876Arabidopsis Thaliana RhizosphereVTAVRLSAGEASEVTRSLQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRELAERLTDLLETAPPALAGRLAAAPRFSDLG
Ga0307295_1003222823300028708SoilMPTVITRSSATAIRISAGEASEVTRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAETADRQLAERLADLLESAPPALAGRLAAAPRFSDLG
Ga0307297_1021328413300028754SoilTAGEASEVTRSQQAAYARQRIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG
Ga0307280_1003671823300028768SoilVTAVRISAGEASAVTRNLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDDARFGDDLQRAIHEIADSTNQELAERLADLLESAPPTLAGRLAAAPRFSDLG
Ga0307280_1010872623300028768SoilGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDDARFGDDLQRAIHEIADSTNQELAERLADLLESAPPTLAGRLAAAPRFSDLG
Ga0307503_1015507623300028802SoilVTAVRISAGEASEVRRNLQAAYARDRIEEVIRAVVEDALSPSRVDVLPWHDEIRFGDDLQRAIHEIADSTNRELAERLADLLESAPPALAGRLAAAPRFSDLG
Ga0307281_1000975733300028803SoilMPTVITRSSATAIRVSLGEASDVARSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLHRAIQEIAESADRQLAERLADLLESAPPALAGRLAAAPRFSDLG
Ga0307281_1001019813300028803SoilVTTVRISAGEASEVTRNLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAETADRQLAERLADLLDSAPPALAGRLAAAPRFSDLG
Ga0307302_1015818723300028814SoilVTAVRISAGEASEVTRSLHAAYARDRIEEVIRAVVEDALSPSRVDVLPWHDEISFEDDLTRAIQEIADTANRQLAERLTDLLETAPPALAGRLAAAPRFSDLG
Ga0307296_1042249923300028819SoilMPTVITRSSATAVRVSAGEASEVTRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAETADRQLAERLADLLESAPPALAG
Ga0307296_1051605423300028819SoilMPTVITRSSETTVRISAGEASEVTRSLHAAYSRERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIHEIAETADRQLAERLADLLESAPPALAGRLAAAPRFSDLG
Ga0307286_1014519523300028876SoilMPTVITRSSATAVRISAGEASEVTRNLHAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEIPFGDDLQRAIQEIADSADRQLTERLADLLETAPPALAGRLAAAPRFSDLG
Ga0307286_1021226813300028876SoilMPTVITRSSATAIRVSAGEASEVTRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFEDDLTRAIQEIAEGANRQLAERLTDLLETA
Ga0308178_107429623300030990SoilMPTVITRSSATAIRISAGEASEVTRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRAIQEIAESTDTQLAERLADLLESAPPALAGRLAAAPRFSDLG
Ga0308185_104776513300031081SoilMPTVITRSSATAVRVSAGEASEVTRSLHAAYARERIEEVIRAVVEDALSPSRIDVLPWHDEIRFGDDLQRTIQEIAESTDTQLAERLADLLESAPPALAGRLAAAPRFSDLG
Ga0307497_1061196313300031226SoilGPARGCGGPGERGGSMPTVITRSSVTAVRISAGEASEVRRSLQAAYSRERIEEVIRAVVEDALSPSRVDVLPWHDEAHFERDLHLVIQEIADTADHQLAERLTDLLESAPPTLAGRLAAAPRFSDLG
Ga0310904_1036011523300031854SoilVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEVRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG
Ga0310890_1078770323300032075SoilISSGEASEVTRSLHAAYSRERITEVVRAVVEDALSPSRVDVLPWHDEVRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLAAAPRFSDLG
Ga0310896_1086372213300032211SoilMPTVITTRSSVTTVRISAGEASEVERNLHAAYSRERIKEVVRAVVEDALSPSRVDVLPWHDEIRFGDDLERAIQEIADSADRELAERLTDLLDSAPPALAGRLA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.