Metagenome / Metatranscriptome Family F097299

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097299
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	64 residues
Representative Sequence	MHTEITFVDGKAADFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGANVAAIYTY
Number of Associated Samples	84
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.55 %
% of genes near scaffold ends (potentially truncated)	40.38 %
% of genes from short scaffolds (< 2000 bps)	78.85 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.308 % of family members)
Environment Ontology (ENVO)	Unclassified (32.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.346 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.26% β-sheet: 47.83% Coil/Unstructured: 48.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
e.60.1.1: Thermophilic metalloprotease (M29)	d2ayia1	2ayi	0.60979
b.38.1.2: Pleiotropic translational regulator Hfq	d2ylba_	2ylb	0.60242
c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains	d3dk9a2	3dk9	0.59086
d.131.1.2: DNA polymerase processivity factor	d1dmla1	1dml	0.58038
b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP	d4f7ua_	4f7u	0.57724

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00456	Transketolase_N	45.19
PF02627	CMD	7.69
PF00067	p450	6.73
PF02779	Transket_pyr	3.85
PF06348	DUF1059	1.92
PF09754	PAC2	1.92
PF08327	AHSA1	1.92
PF00574	CLP_protease	1.92
PF12730	ABC2_membrane_4	0.96
PF10400	Vir_act_alpha_C	0.96
PF13424	TPR_12	0.96
PF00005	ABC_tran	0.96
PF12840	HTH_20	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	45.19
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	45.19
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	7.69
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	7.69
COG2124	Cytochrome P450	Defense mechanisms [V]	6.73
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.85
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	3.85
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.62 %
Unclassified	root	N/A	40.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.62 %
Unclassified	root	N/A	40.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.62 %
Unclassified	root	N/A	40.38 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.38 %
Unclassified	root	N/A	40.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.42 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.92 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.96 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.96 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.96 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.96 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.96 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.85 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_162869	Not Available	1171	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0625740	Not Available	782	Open in IMG/M
3300000956\|JGI10216J12902_100909255	Not Available	968	Open in IMG/M
3300004114\|Ga0062593_100444117	Not Available	1179	Open in IMG/M
3300004114\|Ga0062593_102087229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300004156\|Ga0062589_100887058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	819	Open in IMG/M
3300004463\|Ga0063356_100304448	All Organisms → cellular organisms → Bacteria	1979	Open in IMG/M
3300004463\|Ga0063356_105918275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300004479\|Ga0062595_100378104	Not Available	1002	Open in IMG/M
3300005162\|Ga0066814_10048189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300005164\|Ga0066815_10005140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1414	Open in IMG/M
3300005166\|Ga0066674_10166716	Not Available	1043	Open in IMG/M
3300005171\|Ga0066677_10091339	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300005172\|Ga0066683_10100370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1756	Open in IMG/M
3300005175\|Ga0066673_10451588	Not Available	756	Open in IMG/M
3300005332\|Ga0066388_100037696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4707	Open in IMG/M
3300005332\|Ga0066388_100163826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2816	Open in IMG/M
3300005332\|Ga0066388_100334364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2161	Open in IMG/M
3300005332\|Ga0066388_102633635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	916	Open in IMG/M
3300005338\|Ga0068868_100444391	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005445\|Ga0070708_100091223	All Organisms → cellular organisms → Bacteria	2774	Open in IMG/M
3300005450\|Ga0066682_10204151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1267	Open in IMG/M
3300005467\|Ga0070706_100109038	All Organisms → cellular organisms → Bacteria	2576	Open in IMG/M
3300005468\|Ga0070707_100119590	All Organisms → cellular organisms → Bacteria	2557	Open in IMG/M
3300005468\|Ga0070707_100404648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1325	Open in IMG/M
3300005575\|Ga0066702_10326751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	934	Open in IMG/M
3300005586\|Ga0066691_10132007	Not Available	1426	Open in IMG/M
3300005615\|Ga0070702_101069826	Not Available	643	Open in IMG/M
3300005764\|Ga0066903_100017183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7468	Open in IMG/M
3300005764\|Ga0066903_100426025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2201	Open in IMG/M
3300005764\|Ga0066903_100495809	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300006031\|Ga0066651_10107125	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300006034\|Ga0066656_10001145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11381	Open in IMG/M
3300006034\|Ga0066656_10113399	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300006046\|Ga0066652_100001574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11946	Open in IMG/M
3300006046\|Ga0066652_100228915	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300006046\|Ga0066652_100532719	Not Available	1097	Open in IMG/M
3300006575\|Ga0074053_11130423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300006796\|Ga0066665_10436055	All Organisms → cellular organisms → Bacteria → Proteobacteria	1082	Open in IMG/M
3300006797\|Ga0066659_10063368	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300006797\|Ga0066659_10188566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1500	Open in IMG/M
3300006852\|Ga0075433_10596506	Not Available	970	Open in IMG/M
3300006852\|Ga0075433_10940361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	753	Open in IMG/M
3300006904\|Ga0075424_102268764	Not Available	571	Open in IMG/M
3300009012\|Ga0066710_100064493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4652	Open in IMG/M
3300009012\|Ga0066710_100237251	All Organisms → cellular organisms → Bacteria	2628	Open in IMG/M
3300009012\|Ga0066710_101047432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1260	Open in IMG/M
3300009012\|Ga0066710_103336265	Not Available	612	Open in IMG/M
3300009012\|Ga0066710_104871789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300009137\|Ga0066709_100193315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2663	Open in IMG/M
3300009137\|Ga0066709_104176011	Not Available	526	Open in IMG/M
3300009147\|Ga0114129_13291709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300010130\|Ga0127493_1022377	Not Available	542	Open in IMG/M
3300010336\|Ga0134071_10766149	Not Available	514	Open in IMG/M
3300010362\|Ga0126377_13064127	Not Available	540	Open in IMG/M
3300010398\|Ga0126383_11925275	Not Available	679	Open in IMG/M
3300011000\|Ga0138513_100040898	Not Available	692	Open in IMG/M
3300012201\|Ga0137365_10170341	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300012207\|Ga0137381_10540639	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012208\|Ga0137376_11398843	Not Available	590	Open in IMG/M
3300012210\|Ga0137378_10371510	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300012351\|Ga0137386_11214916	Not Available	527	Open in IMG/M
3300012396\|Ga0134057_1188632	Not Available	513	Open in IMG/M
3300012398\|Ga0134051_1362041	Not Available	582	Open in IMG/M
3300012403\|Ga0134049_1344049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300012915\|Ga0157302_10423500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300012951\|Ga0164300_10307593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300012977\|Ga0134087_10101373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1206	Open in IMG/M
3300012989\|Ga0164305_10051148	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300014157\|Ga0134078_10195046	Not Available	823	Open in IMG/M
3300017966\|Ga0187776_11150276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300017966\|Ga0187776_11309590	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300018051\|Ga0184620_10018999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300018071\|Ga0184618_10227467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300018431\|Ga0066655_10102548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1607	Open in IMG/M
3300018433\|Ga0066667_11093249	Not Available	690	Open in IMG/M
3300018468\|Ga0066662_10112921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1960	Open in IMG/M
3300019279\|Ga0184642_1599488	Not Available	609	Open in IMG/M
3300019361\|Ga0173482_10661448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300019867\|Ga0193704_1046598	Not Available	854	Open in IMG/M
3300022195\|Ga0222625_1360119	Not Available	619	Open in IMG/M
3300025906\|Ga0207699_10805254	Not Available	691	Open in IMG/M
3300025910\|Ga0207684_10445638	Not Available	1112	Open in IMG/M
3300025918\|Ga0207662_10564350	Not Available	789	Open in IMG/M
3300025922\|Ga0207646_10330285	Not Available	1378	Open in IMG/M
3300026075\|Ga0207708_11027917	Not Available	717	Open in IMG/M
3300026342\|Ga0209057_1198760	Not Available	571	Open in IMG/M
3300026540\|Ga0209376_1032318	All Organisms → cellular organisms → Bacteria	3258	Open in IMG/M
3300027873\|Ga0209814_10116344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1139	Open in IMG/M
3300028717\|Ga0307298_10000606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8000	Open in IMG/M
3300028784\|Ga0307282_10342877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300028793\|Ga0307299_10104279	Not Available	1060	Open in IMG/M
3300028799\|Ga0307284_10317484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300028810\|Ga0307294_10012179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2154	Open in IMG/M
3300028812\|Ga0247825_11360408	Not Available	520	Open in IMG/M
3300028878\|Ga0307278_10041322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2098	Open in IMG/M
3300028878\|Ga0307278_10379064	Not Available	622	Open in IMG/M
3300028884\|Ga0307308_10356669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300030990\|Ga0308178_1160240	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	524	Open in IMG/M
3300031114\|Ga0308187_10397429	Not Available	544	Open in IMG/M
3300031199\|Ga0307495_10201683	Not Available	547	Open in IMG/M
3300031421\|Ga0308194_10180952	Not Available	670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.31%
Host-Associated	Host-Associated	7.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.46%
Plants	Host-Associated → Plants	7.69%
Aquatic	Environmental → Aquatic	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%
Freshwater	Environmental → Aquatic → Freshwater	1.92%
Sediment	Environmental → Aquatic → Sediment	1.92%
Peat	Environmental → Terrestrial → Peat	1.92%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.38%
Loam	Environmental → Terrestrial → Soil → Loam	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02714120	2199352025	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY
ICChiseqgaiiDRAFT_06257402	3300000033	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY*
JGI10216J12902_1009092552	3300000956	Soil	WAGLGDGMKTEIEFIDGKTTTFDESANVKMTPLGVEILQQDAAEQVRVLFPWARIERVTQRGANVAAVYTY*
Ga0062593_1004441172	3300004114	Soil	MHSEITFIDGETVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0062593_1020872292	3300004114	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREAEDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0062589_1008870582	3300004156	Soil	MKTDIAFIDGKTASFDETADVKMTPHGIEILQRDQDEQVRVLFPWARIESVTQRGANVSAVYTY*
Ga0063356_1003044484	3300004463	Arabidopsis Thaliana Rhizosphere	GLRLGGQMHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0063356_1059182751	3300004463	Arabidopsis Thaliana Rhizosphere	VKTDISFIDGKSASFDETVDVKMTPLGVEIVQRDQDEQVRVLFPWGRIESVTQRGTNVSAVYTY*
Ga0062595_1003781041	3300004479	Soil	MHTEITFIDGKATTFDETADVKMTPHGVEILQREADEQVRVLFPWARIDRVTQRGANVAAVYTY*
Ga0066814_100481892	3300005162	Soil	MKTEITFVDGKAVAFDETADVKMTPLGVEILERDADDQVRVIFPWARIERVTQRGANVAAIYTY*
Ga0066815_100051403	3300005164	Soil	SEITFIDGKTVNFDETADVKMTPHGVEVLQREAEDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0066674_101667161	3300005166	Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0066677_100913393	3300005171	Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0066683_101003703	3300005172	Soil	MKTDIAFIDGKTASFDETADVKMTPHGIEILQRDRDEQVRVLFPWARIESVTQRGANVAAIYTY*
Ga0066673_104515881	3300005175	Soil	GTTLSRSLREGRMHTEITFVDGKAADFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0066388_1000376962	3300005332	Tropical Forest Soil	MRTDIAFIDGKTATFDETANVKMTPLGVEILQREEDEQVRVLFPWARIESVTQRGANVSAVYTY*
Ga0066388_1001638264	3300005332	Tropical Forest Soil	MKTEIWFVGGDSTSFDETADVKMTPLGVEVLEREDQEQIRVLFPWARIEKVTQRGANVAAIYTY*
Ga0066388_1003343643	3300005332	Tropical Forest Soil	VKTEISFVDGKTASFDETSDVKMTPLGVEILQRDQDEQVRVLFPWARIESVTQRGANVSAVYTY*
Ga0066388_1026336352	3300005332	Tropical Forest Soil	MRTDIAFVDGKTQTFDETADVKMTPLGVEIIQRDGGEQVRVLFPWARIESVTQRGANVSAVYTY*
Ga0068868_1004443913	3300005338	Miscanthus Rhizosphere	SEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0070708_1000912233	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKTDISFIDGKTATFDESADVKMTPLGVEILQRDQNEQIRVLFPWARIESVTQRGANVSAIYTY*
Ga0066682_102041513	3300005450	Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYT
Ga0070706_1001090381	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SFIDGKTATFDESADVKMTPLGVEILQRDQDEQIRVLFPWARIESVTQRGANVSAIYTY*
Ga0070707_1001195905	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TDISFIDGKTATFDESADVKMTPLGVEILQRDQDEQIRVLFPWARIESVTQRGANVSAIYTY*
Ga0070707_1004046482	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MHTEITFVDGKATTFDETADVKMTPHGVEVLQREADEQVRVLFPWARIDRVTQRGANVAAVYTY*
Ga0066702_103267512	3300005575	Soil	MHTEITFVDGKAADFDETADVKMTAHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0066691_101320071	3300005586	Soil	MHTEITFVDGEAADFDETADVKMTPHGVEVLQREGDEQIRVLFPWARIDRVTQRGINVAAIYTY*
Ga0070702_1010698261	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GRMHTEITFVDGKAADFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0066903_1000171838	3300005764	Tropical Forest Soil	MRTDIAFIDGKTSTFDESANVKMTPLGVEILQQEGAEQIRVLFPWARIESVTQRGANVAAVYTY*
Ga0066903_1004260254	3300005764	Tropical Forest Soil	VKTEISFVDGKTASFDETSDVKMTPLGVEILQRDQGEQVRVLFPWARIESVTQRGANVSAVYTY*
Ga0066903_1004958093	3300005764	Tropical Forest Soil	MKTEIEFIDGKSTTFDETANVKMTPLGVEILQQDGAEQVRVLFPWARIESVTQRGANVAAVYTY*
Ga0066651_101071253	3300006031	Soil	MHSEITFIDGKTVDFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0066656_100011452	3300006034	Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINAAAIYTY*
Ga0066656_101133992	3300006034	Soil	MRTDITFIDGKTTTFDETADVKMTALGVEILQRDQDEQIRVLFPWARIDRVTQRGANVSAVYTY*
Ga0066652_1000015747	3300006046	Soil	MHSEITFIDGKTVDFDETADVKMTPLGVEVLQREAEDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0066652_1002289152	3300006046	Soil	MHTEITFVDGKAVNFDETADVKMTPHGVEILQREANEQVRVLFPWARIDRVTQRGANVAAVYTY*
Ga0066652_1005327191	3300006046	Soil	MRTDIMFIDGKTSTFDETTEVKMTPLGVEILQRDRDEQVRVLFPWARIESVTQRGANVSAVYTY*
Ga0074053_111304231	3300006575	Soil	MKTEITFVDGKAVAFDETADVKMTPLGVEILERDADDQVRVIFPWARIERVT
Ga0066665_104360551	3300006796	Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAA
Ga0066659_100633681	3300006797	Soil	MHTEITFVDGEAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0066659_101885661	3300006797	Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAA
Ga0075433_105965061	3300006852	Populus Rhizosphere	MHTEITFIDGKATTFDETADVKMTPHGVEVLQREADEQVRVLFPWARIDRVT
Ga0075433_109403611	3300006852	Populus Rhizosphere	MKTDIAFIDGKTASFDETADVKMTPHGIEILQRDQDEQVRVLFPWARIESVTQRGANVSAIYTY*
Ga0075424_1022687642	3300006904	Populus Rhizosphere	MKTDIAFIDGKTASFDETADVKMTPHGIEILQRDQDQQVRVLFPWARIESVTQRGANVAAVYTY*
Ga0066710_1000644932	3300009012	Grasslands Soil	MHTEITFVDGKAVNFDETADVKMTPHGVEILQREANEQVRVLFPWARIDRVTQRGANVAAVYTY
Ga0066710_1002372511	3300009012	Grasslands Soil	GGRMHTEITFLDGKAVTFDETADVKMTPHGLEVLQREGDEQVRVLFPWARIDRVTQRGANVAAIYTY
Ga0066710_1010474322	3300009012	Grasslands Soil	MKTDIAFIDGKTASFDETADVKMTPHGIEILQRDRDEQVRVLFPWARIESVTQRGANVAAIYTY
Ga0066710_1033362652	3300009012	Grasslands Soil	MHTEITFLDGKAVTFDETADVKMTPHGLEVLQREGDEQIRVLFPWARIDRVTQRGVNVAAIYTY
Ga0066710_1048717891	3300009012	Grasslands Soil	MKTDVRFIDGKLMTFDEATDVKMTPHGVEVLQRDGDEQIRILLPWARIESVTQSGANVAAVYTY
Ga0066709_1001933151	3300009137	Grasslands Soil	GGRMHTEITFLDGKAVTFDETADVKMTPHGLEVLQREGDEQIRVLFPWARIDRVTQRGVNVAAIYTY*
Ga0066709_1041760112	3300009137	Grasslands Soil	MHTEITFLDGKAVTFDETADVKMTPHGLEVLQREGDEQVRVLFPWARIDRVTQRGANVAAIYTY*
Ga0114129_132917092	3300009147	Populus Rhizosphere	MHTEITFIDGKATTFDETADVKMTPHGVEVLQREADEQVRVLFPWARIDRVTQRGTNVAAVYTY*
Ga0127493_10223771	3300010130	Grasslands Soil	GGGMRTDITFIDGKTTTFDETADVKMTALGVEILQRDQDEQIRVLFPWARIDRVTQRGANVSAVYTY*
Ga0134071_107661491	3300010336	Grasslands Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0126377_130641272	3300010362	Tropical Forest Soil	MRTDIAFIDGKTETFDETADVKMTPLGVEIIQRDGAEQVRVLFPWARIESVTQRGANVSAVYTY*
Ga0126383_119252751	3300010398	Tropical Forest Soil	KTDIAFIDGKTSTFDESANVKMTPLGVEILQQNGTEQIRVLFPWARIESVTQRGANVAAVYTY*
Ga0138513_1000408982	3300011000	Soil	MHSEITFIDGKTVDFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGA
Ga0137365_101703412	3300012201	Vadose Zone Soil	MHTEITFVDGKAAEFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0137381_105406392	3300012207	Vadose Zone Soil	MHTEITFVDGKAAEFDETADVKMTPHGVEVLQREGDEQIRVLFPWARIDRVTQRGINVAAIYTY*
Ga0137376_113988432	3300012208	Vadose Zone Soil	MHTEITFVDGKAADFDDTADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0137378_103715101	3300012210	Vadose Zone Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGANVAAIYTY*
Ga0137386_112149161	3300012351	Vadose Zone Soil	TTLGPSPWEGRMHTEITFVDGKAAEFDETADVKMTPHGVEVLQREGDEQIRVLFPWARIDRVTQRGINVAAIYTY*
Ga0134057_11886322	3300012396	Grasslands Soil	KTDVRFIDGKLMTFDEATDVKMTPHGVEVLQRDGDEQIRILFPWARIESVTQSGANVAAVYTY*
Ga0134051_13620411	3300012398	Grasslands Soil	GGQMHTEITFVDGKAVNFDETADVKMTPHGVEVLHRDADEHVRVLFPWARIDRVTQRGANVAAIYTY*
Ga0134049_13440492	3300012403	Grasslands Soil	MHTEITFVDGKAVNFDETADVKMTPHGVEVLHRDADEHVRVLFPWARIDRVTQRGANVAAIYTY*
Ga0157302_104235002	3300012915	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGANVAAIYTY*
Ga0164300_103075932	3300012951	Soil	MHSEITFIDGKTVNFDETADVKMTAHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0134087_101013731	3300012977	Grasslands Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQHGINV
Ga0164305_100511481	3300012989	Soil	EITFIDGKTVNFDETADVKMTAHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY*
Ga0134078_101950461	3300014157	Grasslands Soil	KAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY*
Ga0187776_111502762	3300017966	Tropical Peatland	VKTEITFVGGETVAFDESSDVKMAPLGVEVLQREGEEQVRVLFPWGRIEKVTQRGSNVSAIYTYS
Ga0187776_113095901	3300017966	Tropical Peatland	DRREGLMKTEISFIGGETATFDESSEVKMTPLGVEVLQREADEQVRVLFPWARIEKVTQRGSNIAAIYTY
Ga0184620_100189993	3300018051	Groundwater Sediment	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIY
Ga0184618_102274672	3300018071	Groundwater Sediment	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFQWARIDRVTQRGANVAAIYTY
Ga0066655_101025484	3300018431	Grasslands Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY
Ga0066667_110932492	3300018433	Grasslands Soil	LPLGGRMHTEITFLDGKAVTFDETADVKMTPHGLEVLQREGDEQVRVLFPWARIDRVTQRGANVAAIYTY
Ga0066662_101129213	3300018468	Grasslands Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAAIYTY
Ga0184642_15994882	3300019279	Groundwater Sediment	GQMHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0173482_106614482	3300019361	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREAEDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0193704_10465981	3300019867	Soil	MHSEITFIDGKTVDFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0222625_13601191	3300022195	Groundwater Sediment	QMHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0207699_108052542	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MHTEITFVDGKATTFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0207684_104456381	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKTDISFIDGKTATFDESADVKMTPLGVEILQRDQDEQIRVLFPWARIESVTQ
Ga0207662_105643502	3300025918	Switchgrass Rhizosphere	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY
Ga0207646_103302853	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHTEITFVDGKATTFDETADVKMTPHGVEVLQREADEQVRVLFPWARIDRVTQRGANVAAVYTY
Ga0207708_110279172	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	HTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY
Ga0209057_11987601	3300026342	Soil	KMHTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVAAIYTY
Ga0209376_10323183	3300026540	Soil	MHTEITFVDGKAADFDETADVKMTPHGVEVLQRDGDEQVRVLFPWARIDRVTQRGINVVAIYTY
Ga0209814_101163442	3300027873	Populus Rhizosphere	MKTDIAFIDGKTASFDETADVKMTPHGIEILQRDQDEQVRVLFPWARIESVTQRGANVSAVYTY
Ga0307298_1000060611	3300028717	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQLG
Ga0307282_103428771	3300028784	Soil	MAFPLGGWMHTEITFIDGEAVKFDDTADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAAIYTY
Ga0307299_101042791	3300028793	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAA
Ga0307284_103174841	3300028799	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQ
Ga0307294_100121794	3300028810	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANV
Ga0247825_113604082	3300028812	Soil	MHSEITFIDGTTVNFDETADVKMTPHGVEVLQREAEDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0307278_100413222	3300028878	Soil	MRTEITFVDGKAVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0307278_103790641	3300028878	Soil	KGCCRVKTDISFIDGKTASFDETAEVKMTPLGVEIVHRSADEQVRVLFPWGRIESVTQRGANVSAVYTY
Ga0307308_103566692	3300028884	Soil	MAFPLGGWMHTEITFIDGEAVNFDETADVKMTPHGVEVLQREGDEQVRVLFPWARIDRVTQRGINVAAIYTY
Ga0308178_11602402	3300030990	Soil	GGQMHSEITFIDGKTVNFDETADVKMTPHGVEVLQREAEDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0308187_103974292	3300031114	Soil	HSEITFIDGKTVNFDETADVKMTPHGVEVLQREADDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0307495_102016831	3300031199	Soil	MHSEITFIDGKTVNFDETADVKMTPHGVEVLQREAEDQVRILFPWARIDRVTQRG
Ga0308194_101809522	3300031421	Soil	MHSEITFIDGKTVDFDETADVKMTPHGVEVLQREAEDQVRILFPWARIDRVTQRGANVAAIYTY
Ga0326729_10197313	3300033432	Peat Soil	VAVQTEVTFVGGEATVFDDTAEVKMTAFGIEVFQREGEEQVRVLFPWARIEKVTQRGTNVTAIYTYS
Ga0326723_0022864_645_851	3300034090	Peat Soil	VVAVQTEVTFVGGEATVFDDTAEVKMTAFGIEVFQREGEEQVRVLFPWARIEKVTQRGTNVTAIYTYS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097299

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences