Metagenome / Metatranscriptome Family F097278

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097278
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	78 residues
Representative Sequence	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIEALESKGPSTHGL
Number of Associated Samples	99
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	51.46 %
% of genes near scaffold ends (potentially truncated)	50.96 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.808 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (16.346 % of family members)
Environment Ontology (ENVO)	Unclassified (35.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.385 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.58% β-sheet: 0.00% Coil/Unstructured: 89.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02371	Transposase_20	33.65
PF13586	DDE_Tnp_1_2	0.96
PF01548	DEDD_Tnp_IS110	0.96
PF00206	Lyase_1	0.96
PF02566	OsmC	0.96
PF13358	DDE_3	0.96
PF00589	Phage_integrase	0.96
PF04800	NDUS4	0.96
PF13700	DUF4158	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	34.62
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.96
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
All Organisms	root	All Organisms	45.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
cellular organisms	root	All Organisms → cellular organisms	45.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	33.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	25.96 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	5.77 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.96 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	25.96 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	2.88 %
Telmatospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum	0.96 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	25.96 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.96 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.96 %
unclassified Telmatospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum	0.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.81 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	25.96 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.96 %
Telmatospirillum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum → Telmatospirillum sp.	0.96 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10172475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1459	Open in IMG/M
3300001661\|JGI12053J15887_10077277	All Organisms → cellular organisms → Bacteria → Proteobacteria	1838	Open in IMG/M
3300002245\|JGIcombinedJ26739_100217766	All Organisms → cellular organisms → Bacteria → Proteobacteria	1802	Open in IMG/M
3300004081\|Ga0063454_101123590	Not Available	644	Open in IMG/M
3300004152\|Ga0062386_100644079	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300004153\|Ga0063455_100188404	Not Available	1004	Open in IMG/M
3300005541\|Ga0070733_10139946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1566	Open in IMG/M
3300005544\|Ga0070686_101309980	Not Available	605	Open in IMG/M
3300005602\|Ga0070762_10885808	Not Available	608	Open in IMG/M
3300005950\|Ga0066787_10169302	Not Available	504	Open in IMG/M
3300005995\|Ga0066790_10510616	Not Available	514	Open in IMG/M
3300006050\|Ga0075028_100595705	Not Available	656	Open in IMG/M
3300006604\|Ga0074060_11684689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	703	Open in IMG/M
3300009518\|Ga0116128_1042196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1466	Open in IMG/M
3300009549\|Ga0116137_1123990	Not Available	734	Open in IMG/M
3300009623\|Ga0116133_1028496	Not Available	1380	Open in IMG/M
3300009624\|Ga0116105_1131607	Not Available	650	Open in IMG/M
3300009631\|Ga0116115_1105995	Not Available	720	Open in IMG/M
3300009636\|Ga0116112_1023209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	2068	Open in IMG/M
3300009644\|Ga0116121_1015589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	2454	Open in IMG/M
3300009646\|Ga0116132_1022557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	2215	Open in IMG/M
3300009649\|Ga0105855_1233747	Not Available	563	Open in IMG/M
3300009784\|Ga0123357_10992363	Not Available	524	Open in IMG/M
3300010048\|Ga0126373_13014694	Not Available	525	Open in IMG/M
3300010049\|Ga0123356_13493391	Not Available	545	Open in IMG/M
3300010341\|Ga0074045_11068266	Not Available	505	Open in IMG/M
3300010379\|Ga0136449_103155277	Not Available	638	Open in IMG/M
3300012212\|Ga0150985_119572053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300012683\|Ga0137398_10617474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	750	Open in IMG/M
3300014158\|Ga0181521_10170766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1224	Open in IMG/M
3300014159\|Ga0181530_10103281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1700	Open in IMG/M
3300014489\|Ga0182018_10019855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4460	Open in IMG/M
3300014495\|Ga0182015_10509987	Not Available	768	Open in IMG/M
3300014501\|Ga0182024_11481772	Not Available	776	Open in IMG/M
3300016730\|Ga0181515_1012119	Not Available	570	Open in IMG/M
3300017929\|Ga0187849_1388105	Not Available	511	Open in IMG/M
3300017931\|Ga0187877_1043470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	2109	Open in IMG/M
3300017935\|Ga0187848_10055613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1890	Open in IMG/M
3300017938\|Ga0187854_10041245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	2358	Open in IMG/M
3300017941\|Ga0187850_10040208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2481	Open in IMG/M
3300017946\|Ga0187879_10397512	Not Available	764	Open in IMG/M
3300018009\|Ga0187884_10088520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1367	Open in IMG/M
3300018013\|Ga0187873_1184179	Not Available	787	Open in IMG/M
3300018015\|Ga0187866_1211740	Not Available	713	Open in IMG/M
3300018017\|Ga0187872_10052482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	2174	Open in IMG/M
3300018018\|Ga0187886_1070727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1530	Open in IMG/M
3300018022\|Ga0187864_10136869	Not Available	1226	Open in IMG/M
3300018035\|Ga0187875_10148501	Not Available	1312	Open in IMG/M
3300018038\|Ga0187855_10477477	Not Available	726	Open in IMG/M
3300018040\|Ga0187862_10041902	Not Available	3378	Open in IMG/M
3300018044\|Ga0187890_10090016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1789	Open in IMG/M
3300021404\|Ga0210389_11493577	Not Available	514	Open in IMG/M
3300025454\|Ga0208039_1013412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1888	Open in IMG/M
3300025459\|Ga0208689_1025890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1487	Open in IMG/M
3300025463\|Ga0208193_1026987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1459	Open in IMG/M
3300025473\|Ga0208190_1014607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1913	Open in IMG/M
3300025480\|Ga0208688_1081640	Not Available	642	Open in IMG/M
3300025500\|Ga0208686_1018660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1816	Open in IMG/M
3300025625\|Ga0208219_1082370	Not Available	748	Open in IMG/M
3300025930\|Ga0207701_10737334	Not Available	833	Open in IMG/M
3300026220\|Ga0209855_1039346	Not Available	823	Open in IMG/M
3300026555\|Ga0179593_1225535	All Organisms → cellular organisms → Bacteria → Proteobacteria	3298	Open in IMG/M
3300026823\|Ga0207759_112699	Not Available	667	Open in IMG/M
3300027043\|Ga0207800_1051571	Not Available	552	Open in IMG/M
3300027629\|Ga0209422_1015816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1865	Open in IMG/M
3300027678\|Ga0209011_1209048	Not Available	529	Open in IMG/M
3300027729\|Ga0209248_10210010	Not Available	573	Open in IMG/M
3300027745\|Ga0209908_10110385	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300027767\|Ga0209655_10068971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1176	Open in IMG/M
3300027768\|Ga0209772_10014293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	2204	Open in IMG/M
3300027795\|Ga0209139_10122107	Not Available	919	Open in IMG/M
3300027895\|Ga0209624_10183982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1386	Open in IMG/M
3300027908\|Ga0209006_11398853	Not Available	535	Open in IMG/M
3300028381\|Ga0268264_12249097	Not Available	553	Open in IMG/M
3300028574\|Ga0302153_10295009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	554	Open in IMG/M
3300028795\|Ga0302227_10227832	Not Available	715	Open in IMG/M
3300029943\|Ga0311340_11613467	Not Available	503	Open in IMG/M
3300029944\|Ga0311352_10203090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1688	Open in IMG/M
3300029999\|Ga0311339_10765084	Not Available	935	Open in IMG/M
3300030503\|Ga0311370_11950297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	589	Open in IMG/M
3300030524\|Ga0311357_10991987	Not Available	740	Open in IMG/M
3300030617\|Ga0311356_11148886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	717	Open in IMG/M
3300030618\|Ga0311354_11929617	Not Available	510	Open in IMG/M
3300030646\|Ga0302316_10325438	Not Available	620	Open in IMG/M
3300030760\|Ga0265762_1060174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300031057\|Ga0170834_107512036	Not Available	531	Open in IMG/M
3300031231\|Ga0170824_105219442	Not Available	939	Open in IMG/M
3300031231\|Ga0170824_118196955	Not Available	528	Open in IMG/M
3300031231\|Ga0170824_124922915	Not Available	558	Open in IMG/M
3300031234\|Ga0302325_10926014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum → Telmatospirillum sp.	1205	Open in IMG/M
3300031234\|Ga0302325_13162724	Not Available	527	Open in IMG/M
3300031236\|Ga0302324_100743772	Not Available	1375	Open in IMG/M
3300031236\|Ga0302324_101395063	Not Available	918	Open in IMG/M
3300031452\|Ga0272422_1025498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3899	Open in IMG/M
3300031708\|Ga0310686_109190117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1544	Open in IMG/M
3300031715\|Ga0307476_10105448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1994	Open in IMG/M
3300031771\|Ga0318546_11162614	Not Available	542	Open in IMG/M
3300032001\|Ga0306922_10441177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1392	Open in IMG/M
3300032515\|Ga0348332_11833621	Not Available	972	Open in IMG/M
3300032898\|Ga0335072_10294711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1823	Open in IMG/M
3300033402\|Ga0326728_10248998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1696	Open in IMG/M
3300034163\|Ga0370515_0048366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	1879	Open in IMG/M
3300034163\|Ga0370515_0115106	Not Available	1158	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.65%
Aquatic	Environmental → Aquatic	37.50%
Arthropoda	Host-Associated → Arthropoda	1.92%
Plants	Host-Associated → Plants	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.31%
Freshwater	Environmental → Aquatic → Freshwater	36.54%
Peat	Environmental → Terrestrial → Peat	14.42%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.96%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	36.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	17.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	23.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.92%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	13.46%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.85%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026220	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031452	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand nord	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101724751	3300001593	Forest Soil	MKELNEMTIGRTDDPENPLTPMALEAAKLFGAGSRNPSGPADMMPRRKAEHMIAIDLPVRILTFSLASEGPSTH
JGI12053J15887_100772771	3300001661	Forest Soil	MKELNEMTIGRTDDPENPISVPAFEVAKLFGAGSRTPSGPADKVPRRQAGHMLAIDPPVRILIEALASEGLSTHAR*
JGIcombinedJ26739_1002177663	3300002245	Forest Soil	MKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRIPSGPADMVPRRQAGHMLAIDPPVKILFEALASKGPSTH
Ga0063454_1011235902	3300004081	Soil	VKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRNPSGPADMVPRQQAGHMLAIDPPVKILNEALASKGPSTHAKARRV*
Ga0062386_1006440791	3300004152	Bog Forest Soil	MKELNEMTIGRADDPENPFSVPASEAAKLFGAGSRIPSGPADMVPRRQAAHMLAIDPPVKILNEALASKGPSTHAR*
Ga0063455_1001884042	3300004153	Soil	VKELNEMTIGRTDDSENPFRVSAFEAAGLFGTGSRTPSGPADMMPRQQAEHMIAIDPLVRILTSSLESKGPSTHDSKWWDSIAEHA*
Ga0070733_101399463	3300005541	Surface Soil	MKELNEMTIGRTDDPENPFRVPAFEAAGLWGWIAEPIWAAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSNKTLGLEVSELSEIESGA*
Ga0070686_1013099802	3300005544	Switchgrass Rhizosphere	MKELNEMTIGRTDDPENPSCVTALQAASLFGTGSRTPSGPAAVCRVNQAGHMIAIDPTRQNSCWALASKGPSTHDTGGGASA
Ga0070762_108858082	3300005602	Soil	MKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRIPSGPADMVPRRQAGHMLAIDPPVKILFEALASKGPSTHAR*
Ga0066787_101693021	3300005950	Soil	MEEQNEMTIGRTEDPKTPSPPMAFEAAGLFGTGSRTPSGPAACAPRQQAGHMIAVELVVRLLDFSLAS
Ga0066790_105106161	3300005995	Soil	MEEQNEMTIGRTEDPKTPSPPMAFEAAGLFGTGSRTPSGPAACAPRQQAGHMIAVELVVRLLDFSLASKGPSTHGGRRRAK
Ga0075028_1005957052	3300006050	Watersheds	MGHDDAHHGPLALNRALMDAGMKELNEMTIGRTDDPENPARVTAFEAACLFGIGSRTPSGLAVIAPRQQAGHMIAIDPPVEYLILSLASKGPST
Ga0074060_116846891	3300006604	Soil	VKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRTPSGPADMMPRQQAAHMLAIDPPVRILIEALASEGPSTHAR*
Ga0116128_10421963	3300009518	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDF*
Ga0116137_11239901	3300009549	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDTKAHTINP*
Ga0116133_10284962	3300009623	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDSKGLSRQEGSYEDAPHLRPSP*
Ga0116105_11316071	3300009624	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDSQGT*
Ga0116115_11059952	3300009631	Peatland	MKELNEMTIGRTDDPENPLEPVALEVIGLFGAGSRIPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDPKVQQADP*
Ga0116112_10232094	3300009636	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDS*
Ga0116121_10155894	3300009644	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTHDSKPRSSSALASAGALIE*
Ga0116132_10225573	3300009646	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQGLLDPGDIVRLWTYL*
Ga0105855_12337471	3300009649	Permafrost Soil	MKELNEMTIGRTDDPENPFRVSAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAIDPPVRILSSALESKEPSTQDSQGLAARL
Ga0105856_13166072	3300009662	Permafrost Soil	MEEQNEMTIGRTEDPKTPSPPMAFEAAGLFGTGSRTPSGPAACAPRQQAGHMIAVELVVRLL
Ga0123357_109923631	3300009784	Termite Gut	VRELNEMTIGRTEDPENPFHRKASEVSGLFGTGSRNPSGPAVIVPREQAGHMHAVDPRVSFLVTAL
Ga0126373_130146941	3300010048	Tropical Forest Soil	VRELIEMTIGRTEDPENPAVPSAFEVDVLFGTGSRNPSGSAVIAPRQQAEHMDAVDPHVILRVDALEPSGPFHIRGTS*
Ga0123356_134933912	3300010049	Termite Gut	VRELNEMTIGRTEDPENPVVPSAFEVDVLFGTGSRNPSGPAVMRPHQQAGHMNAVDPDAKFLVDALE
Ga0074045_110682661	3300010341	Bog Forest Soil	DRQQPVTPEPRVDAGVKELNEMTIGRTDDPGIPLGAKACEAASGFGTGSRTPSGPAVMALRRQAGHMIAIDPPVRFLIFSLAPKGPSTHAPTRLQSAAAAA*
Ga0136449_1031552771	3300010379	Peatlands Soil	MTIGRTDDPENPLSVSAVEAAGLFGIGLRTPSGPAAMTPRQKAGHMIAIDPPVRFLTFPLASRGPSTHGTEGRLDWMAPDRSVWTGR
Ga0150985_1195720532	3300012212	Avena Fatua Rhizosphere	VKELNEMTIGRTDDSENPFRVSAFEAAGLFGTGSRTPSGPAGMMPRQQAEHMIAIDPLVRILTSSLESKGPSTHDSKS*
Ga0137398_106174742	3300012683	Vadose Zone Soil	VDAGVQELTEMTIGRIDDPENPLKPVAIEVVGLFGIGSRIPSGPAVIVPRQQAEHMIAIDPPVRLLNFALASEGPSTHER*
Ga0181521_101707661	3300014158	Bog	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTHDSLD*
Ga0181530_101032811	3300014159	Bog	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDTKV
Ga0182018_100198553	3300014489	Palsa	MKELNEMTIGRTDDPENPLSVSAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAIDPPVRILNEALESKGPSTQDT*
Ga0182015_105099872	3300014495	Palsa	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIEALESKGPSTHGL*
Ga0182024_114817722	3300014501	Permafrost	MKELNEMTIGRTDDPENPVRVPAFEADGLFGTGSRNPSGPAVMTPRQQAGHMIAIDPPVRILNEALESKGPSTQDSKVGKRRTV*
Ga0181515_10121192	3300016730	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFK
Ga0187849_13881051	3300017929	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDSKGLSRQEGSYEDA
Ga0187877_10434704	3300017931	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDS
Ga0187848_100556132	3300017935	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTHDSLD
Ga0187854_100412452	3300017938	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDF
Ga0187850_100402084	3300017941	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQGP
Ga0187879_103975123	3300017946	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPST
Ga0187884_100885201	3300018009	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVKILIEALASEGPSTHTLSGQRLEHRTNLP
Ga0187873_11841793	3300018013	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDSQAVWR
Ga0187866_12117402	3300018015	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEF
Ga0187872_100524821	3300018017	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDTKAHTINP
Ga0187886_10707273	3300018018	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQ
Ga0187864_101368691	3300018022	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDSKGLSRQEGSYEDAPHLRPSP
Ga0187875_101485011	3300018035	Peatland	MPGVQELTEMTIGRIGDPKSPLEPVAPEAARLFGTGSRIPSGPAVMMPRQQAEHMIAIDPPVRILFEAL
Ga0187855_104774772	3300018038	Peatland	VKELNEMTIGRTDDPEIPIYVPAFEAAKVFGTGSRIPSGPADIVPRQQAGHMLAIDPHVRILIEALASEGPSTHAR
Ga0187862_100419025	3300018040	Peatland	VGAGMKELNEMTIGRTDDPENPFRVSAFKAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVKILTFALEPKGPSTQGL
Ga0187890_100900161	3300018044	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQD
Ga0210389_114935771	3300021404	Soil	LEARVDAGMRELKEMTIGRTDDPENPVSVPAFEAAKLFGAGSRIPSGPADMMPRRQAGHMLAIDTPVRILFEALASKGSSTHAR
Ga0208039_10134124	3300025454	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPS
Ga0208689_10258903	3300025459	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIET
Ga0208193_10269871	3300025463	Peatland	MKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRIPSGPADMVPRRQAGHMLAIDPPVKILFEALASK
Ga0208190_10146071	3300025473	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTHTL
Ga0208688_10816401	3300025480	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLE
Ga0208686_10186601	3300025500	Peatland	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTHT
Ga0208219_10823702	3300025625	Arctic Peat Soil	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEPKGPSTQDS
Ga0207701_107373342	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRIPSGPADMVPRRQAAHMLAIDPPVKILNEALASEGPSTHAR
Ga0209855_10393461	3300026220	Permafrost Soil	MEEQNEMTIGRTEDPKTPSPPMAFEAAGLFGTGSRTPSGPAACAPRQQAGHMIAVELVVRLLDFSLASKGPSTHGGRRRAEQRQIPTVI
Ga0179593_12255351	3300026555	Vadose Zone Soil	DAGVKELNEMTTGRIGDPENPLRSKAVKAARMFGTGSRIPSGPADMMPRQQAEHMIAIDPPVRLLNFALASEGPSTHERG
Ga0207759_1126992	3300026823	Tropical Forest Soil	MTIGRTDDPENPISVPAFEAAKLFGTGSRTPSGPADMVPRQQAGHMLAIDTPVRILVGALASEGPSTHAASTG
Ga0207800_10515711	3300027043	Tropical Forest Soil	MTIGRTDDPENPISVPAFEAAKLFGTGSRTPSGPADMVPRQQAGHMLAIDTPVRILLEALASEGP
Ga0209422_10158161	3300027629	Forest Soil	MKELNEMTIGRTDDPENPLTPMALEAAKLFGAGSRNPSGPADMMPRRKAEHMIAIDLPVRILTFSLASEGPSTHG
Ga0209011_12090482	3300027678	Forest Soil	MKELNEMTIGRTDDPENPLTPMALEAAKLFGAGSRNPSGPADMMPRRKAEHMIAIDLPVRILTF
Ga0209248_102100101	3300027729	Bog Forest Soil	MIGHSRSLSEPRVDAGVKELTEMTIGRIDDPEIPLKPVALEVVGLFGTGSRIPSGPAVVVPRQQAEHMIAIDPPVRILFEALEPKGPSTHGSTLRCA
Ga0209908_101103852	3300027745	Thawing Permafrost	MKELNEMTIGRTDDPENPLSVSAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAIDPPVRILNEALESKGPSTQDT
Ga0209655_100689711	3300027767	Bog Forest Soil	PEACVDAGVKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRIPSGPADMVPRRQAAHMLAIDPPVKILIEALASEGPSTHTLSRQGYASRPRH
Ga0209772_100142934	3300027768	Bog Forest Soil	MKELNEMTIGRTDDPENPLSVPAFEAAKLFGAGSRIPSGPADMVPRRQAAHMLAIEPPVKILIEALASEGPSTH
Ga0209139_101221071	3300027795	Bog Forest Soil	MKELNEMTIGRTDDPENPLSVPAFEAAKLFGAGSRIPSGPADMVPRRQAAHMLAIEPPVKILIEALASEGPSTHAR
Ga0209624_101839821	3300027895	Forest Soil	MKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRIPSGPADMVPRRQAGHMLAIDPPVKILFEALASKGPSTHER
Ga0209006_113988531	3300027908	Forest Soil	VGVGMKELNEMTIGRTDDPENPLAFEAAGLFGAGTRNPSGPAVMMPRQQAGHMIAIDPPVRILIEALESKGPSTQDT
Ga0268264_122490972	3300028381	Switchgrass Rhizosphere	MKELNEMTIGRTDDPENPLSVSAFEAAGLFGAGSRNPSGPAVMLPRQQAGHMIAIDPPVRILTSALES
Ga0302153_102950091	3300028574	Bog	PPEPRVDAGVKELNEMTIGRTHDSENPFSVPAFEAAKLFGTGSRTPSGPADMVPRQQAGHMIAIDPSVRILFDALASEGPSTHAR
Ga0302227_102278322	3300028795	Palsa	MTIGRTDDPENPSRTAAFEAASLFGAGSRIPSGPAAMLPRQQAGHMTAIDPIVGVLDFSLASQGPSTHGAAG
Ga0311340_116134672	3300029943	Palsa	MTIGRTDDLENPSRATAFEAASLFGAGSRIPSGPAAMLPRQQAGHMTAIDPIVGFLDFSLASKGPSTHALANAGADPCRC
Ga0311352_102030903	3300029944	Palsa	MKKLNEMTIGRTDDPENPISVPAFEVAKLFGAGSRTPSGPADMVPRRQAGHMLAIDPSVRILIEALASEGPSTHAR
Ga0311339_107650843	3300029999	Palsa	MCVGAGMKELNEMTIGRTDDPENPFSVSAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAIDPTVRILTFALESKGPSTQDSE
Ga0311370_119502972	3300030503	Palsa	VDARVQELTEMTIGRIDDPENPLEPVALEVIGLFGAGSRIPSGPAVMMPRQQAEHMIAIDPPVRILFEALEPKGPSPHGSISE
Ga0311357_109919872	3300030524	Palsa	VKELNEMTIGRTDDPENPFRAPAFKAELLFGAGSRNPSGPADMRRVTKAGHMIAIDLPVRYLT
Ga0311356_111488862	3300030617	Palsa	VDARVQELTEMTIGRTDDPENPLEPVALEVIGLFGAGSRIPSGPAVMMPRQPAEHMIAIDPPVRILFEALEPKGPSPHGSISE
Ga0311354_119296172	3300030618	Palsa	MKELNEMTIGRTDDPENPSLATAFKAASLFGCGSRTPSGPADMRRVTKAGHMIAIDLPVRYLTFSLASKGPSTHGTEGGGLCVDSESVTAE
Ga0302316_103254382	3300030646	Palsa	MKKLNEMTIGRTDDPENPISVPAFEVAKLFGAGSRTPSGPADMVPRRQAGHMLAIDPSVRILIEALASEGPSTHA
Ga0265762_10601742	3300030760	Soil	MKELNEMTIGRTDDPENPISVPAFEAAKLFGAGSRIPSGPADMVPRRQAGHMLAIDPPVKILFEALASKGPSTHAR
Ga0170834_1075120361	3300031057	Forest Soil	MKELHEMTIGRTDDPENPISAPAFEAAKLFGAGSRIPSGPADIVPRQQAGHMLAIDMTVRILVEALASEG
Ga0170824_1052194422	3300031231	Forest Soil	MKELHEMTIGRTDDPENPISAPAFEAAKLFGAGSRIPSGPADIVPRQQAGHMLAIDMTVRILVEALASKGPSTHAR
Ga0170824_1181969551	3300031231	Forest Soil	MKELNEMTIGRTDDPENLFSVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAIDPPVRILTFALESEGPSTQDTEASREKLPPELP
Ga0170824_1249229151	3300031231	Forest Soil	MKELNEMTIGRSDNPENPLTPLAVEAAKLFGAGSRNPSGPADMMPRRKAEHMIAIDLPVRILTFSLASEGPSTHAPSHEPLGRRLPCWRA
Ga0302325_109260142	3300031234	Palsa	MCVGAGMKELNEMTIGRTDDPENPFSVSAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILNEALESKGPSTQDSKQFRLQLGAGL
Ga0302325_131627241	3300031234	Palsa	MTIDRIDDPENPFTVSAFEAAGLFGTGSRTPSGPAVMPPRQQAGHMIAIDPPVRFLISSLASKGPSTQALRGLGPR
Ga0302324_1007437723	3300031236	Palsa	MTIGRTDDPENPSRTAAFEAASLFGAGSRIPSGPAAMLPRQQAGHMTAIDPIVGVLDSSLASKGPSTHVLG
Ga0302324_1013950633	3300031236	Palsa	MKELNEMTIGRTDDPENPFRVPAFEVAGLFGAGSRNPSGPAVMMPRQQAGHMIAIDPPVRILTFALESKGPSTQDS
Ga0272422_10254985	3300031452	Rock	VDAGAQELTEMTIGRIDDPESPLEPVALEAAGLFGTRSRIPFGPAVMVPRRKAEHMIAIDPPVRILFEALEPKGPSTHGSTSPCGSSI
Ga0310686_1091901173	3300031708	Soil	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDSKDSGG
Ga0307476_101054481	3300031715	Hardwood Forest Soil	VKELNEMTIGRNDDPENPISVPALEVAKLFGTGSRIPSGPADVVPRQQAGHMLAVDPPVKILVDALEPKGPSTHTLSRQG
Ga0318546_111626141	3300031771	Soil	VKELIEMTIGRTEDPENPTIALAFEVGEMFGTGSRNPSGPAVIAPRQQAGHMIAVDPYVILLADALEPGGPSTHA
Ga0306922_104411771	3300032001	Soil	VKELIEMTIGRTEDPENPTIALAFEVGEMFGTGSRNPSGPAVIAPRQQAGHMIAVDPYVILLADALEPGGPSTH
Ga0348332_118336213	3300032515	Plant Litter	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIETLEFKGPSTQDTNRLLNSPLILPDSV
Ga0335072_102947114	3300032898	Soil	MTLGRTEDPENPIRVLAVKAAGLFGTGSRNPSGPAVTIPRQKAGHMNAIRPEVFCLIAPLNPRG
Ga0326728_102489981	3300033402	Peat Soil	MKELNEMTIGRTDDPENPLRVSAFEAAGLFGTGSRNPSGPAVMMPRQQAGHMIAIDPPVRILNEALESKGPSTQDS
Ga0370515_0048366_402_659	3300034163	Untreated Peat Soil	MKELNEMTIGRTDDPENPFRVPAFEAAGLFGAGSRNPSGPAVMMPRQQAGHMIAVDPPVRILIEALESKGPSTQDPKAKSPSSPG
Ga0370515_0115106_57_287	3300034163	Untreated Peat Soil	MKELNEMTIGRTDDPEIPLSVPSFEAAKLFGAGSRIPSGPADMVPRRQAAHMLAIDPPVKILIEALASEGPSTHAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097278

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences