Metagenome / Metatranscriptome Family F097274

Basic Information
Family ID	F097274
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	40 residues
Representative Sequence	MGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLGVV
Number of Associated Samples	86
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.88 %
% of genes near scaffold ends (potentially truncated)	53.85 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Unclassified (66.346 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.423 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02811	PHP	61.54
PF07733	DNA_pol3_alpha	8.65
PF12760	Zn_Tnp_IS1595	1.92
PF09926	DUF2158	0.96
PF00171	Aldedh	0.96
PF14579	HHH_6	0.96
PF00166	Cpn10	0.96
PF12833	HTH_18	0.96
PF06568	DUF1127	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	8.65
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	8.65
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.96
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.96
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.96
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
All Organisms	root	All Organisms	33.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
cellular organisms	root	All Organisms → cellular organisms	33.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.92 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.73 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.96 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	6.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.85 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %
Pinirhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Pinirhizobacter	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	4.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.85 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.92 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.96 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	0.96 %
Pinirhizobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Pinirhizobacter → Pinirhizobacter soli	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.35 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	4.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.85 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.92 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.96 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	0.96 %
Pinirhizobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Pinirhizobacter → Pinirhizobacter soli	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10079373	Not Available	831	Open in IMG/M
3300004092\|Ga0062389_103591897	Not Available	582	Open in IMG/M
3300005332\|Ga0066388_103248197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	831	Open in IMG/M
3300005531\|Ga0070738_10379434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	564	Open in IMG/M
3300005538\|Ga0070731_10759235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	644	Open in IMG/M
3300005543\|Ga0070672_100600963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	958	Open in IMG/M
3300005764\|Ga0066903_106036925	Not Available	634	Open in IMG/M
3300006606\|Ga0074062_12546657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	635	Open in IMG/M
3300006806\|Ga0079220_10311220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	979	Open in IMG/M
3300009519\|Ga0116108_1006666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4732	Open in IMG/M
3300009519\|Ga0116108_1041277	Not Available	1489	Open in IMG/M
3300009522\|Ga0116218_1334856	Not Available	677	Open in IMG/M
3300009523\|Ga0116221_1129357	Not Available	1105	Open in IMG/M
3300009545\|Ga0105237_11961421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	594	Open in IMG/M
3300009643\|Ga0116110_1293086	Not Available	517	Open in IMG/M
3300009683\|Ga0116224_10102667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1385	Open in IMG/M
3300009698\|Ga0116216_10057503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	2396	Open in IMG/M
3300009700\|Ga0116217_10550647	Not Available	721	Open in IMG/M
3300009764\|Ga0116134_1264706	Not Available	592	Open in IMG/M
3300009826\|Ga0123355_11331454	Not Available	717	Open in IMG/M
3300009839\|Ga0116223_10878209	Not Available	512	Open in IMG/M
3300010049\|Ga0123356_13711170	Not Available	528	Open in IMG/M
3300010376\|Ga0126381_104470628	Not Available	540	Open in IMG/M
3300010376\|Ga0126381_104473531	Not Available	540	Open in IMG/M
3300010379\|Ga0136449_100313117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	2851	Open in IMG/M
3300010379\|Ga0136449_100788710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1573	Open in IMG/M
3300010379\|Ga0136449_100912599	Not Available	1429	Open in IMG/M
3300010379\|Ga0136449_101684873	All Organisms → cellular organisms → Bacteria → Proteobacteria	957	Open in IMG/M
3300010379\|Ga0136449_102530570	Not Available	735	Open in IMG/M
3300010379\|Ga0136449_102783211	Not Available	691	Open in IMG/M
3300010398\|Ga0126383_12290927	Not Available	626	Open in IMG/M
3300011067\|Ga0138594_1019341	Not Available	634	Open in IMG/M
3300012089\|Ga0153924_1130338	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300013296\|Ga0157374_11535588	Not Available	689	Open in IMG/M
3300014156\|Ga0181518_10308959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	785	Open in IMG/M
3300014164\|Ga0181532_10318502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	877	Open in IMG/M
3300014164\|Ga0181532_10355474	Not Available	820	Open in IMG/M
3300015373\|Ga0132257_104178677	Not Available	525	Open in IMG/M
3300016270\|Ga0182036_10464270	Not Available	997	Open in IMG/M
3300016319\|Ga0182033_10607913	Not Available	950	Open in IMG/M
3300016319\|Ga0182033_11083620	Not Available	715	Open in IMG/M
3300016341\|Ga0182035_11205935	Not Available	676	Open in IMG/M
3300016341\|Ga0182035_12180014	Not Available	502	Open in IMG/M
3300016404\|Ga0182037_10679340	Not Available	880	Open in IMG/M
3300016422\|Ga0182039_12265450	Not Available	501	Open in IMG/M
3300016445\|Ga0182038_11157272	Not Available	689	Open in IMG/M
3300017823\|Ga0187818_10544198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300017931\|Ga0187877_1193303	Not Available	801	Open in IMG/M
3300017943\|Ga0187819_10488130	Not Available	703	Open in IMG/M
3300017970\|Ga0187783_10598923	Not Available	797	Open in IMG/M
3300017970\|Ga0187783_10600082	Not Available	796	Open in IMG/M
3300017970\|Ga0187783_10620070	Not Available	782	Open in IMG/M
3300017972\|Ga0187781_10030035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3756	Open in IMG/M
3300017972\|Ga0187781_10370246	Not Available	1021	Open in IMG/M
3300017972\|Ga0187781_11132035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	575	Open in IMG/M
3300017973\|Ga0187780_10399101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Pinirhizobacter → Pinirhizobacter soli	975	Open in IMG/M
3300017975\|Ga0187782_10363737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300017975\|Ga0187782_10414139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1025	Open in IMG/M
3300017975\|Ga0187782_10678600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	794	Open in IMG/M
3300018003\|Ga0187876_1189892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	695	Open in IMG/M
3300018006\|Ga0187804_10482928	Not Available	555	Open in IMG/M
3300018033\|Ga0187867_10339782	Not Available	837	Open in IMG/M
3300018062\|Ga0187784_11200582	Not Available	602	Open in IMG/M
3300019284\|Ga0187797_1207768	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300020579\|Ga0210407_10043353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	3349	Open in IMG/M
3300020582\|Ga0210395_10256963	Not Available	1313	Open in IMG/M
3300020583\|Ga0210401_10183238	Not Available	1950	Open in IMG/M
3300021171\|Ga0210405_10153964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1820	Open in IMG/M
3300021180\|Ga0210396_10256200	Not Available	1555	Open in IMG/M
3300021403\|Ga0210397_10035040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3154	Open in IMG/M
3300021403\|Ga0210397_11418587	Not Available	539	Open in IMG/M
3300021420\|Ga0210394_11031652	Not Available	711	Open in IMG/M
3300025453\|Ga0208455_1059639	Not Available	791	Open in IMG/M
3300025460\|Ga0208562_1105303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	544	Open in IMG/M
3300025920\|Ga0207649_10722714	Not Available	773	Open in IMG/M
3300027625\|Ga0208044_1144024	Not Available	665	Open in IMG/M
3300027667\|Ga0209009_1201935	Not Available	502	Open in IMG/M
3300027853\|Ga0209274_10520431	Not Available	616	Open in IMG/M
3300028906\|Ga0308309_10284982	Not Available	1393	Open in IMG/M
3300029636\|Ga0222749_10582068	Not Available	611	Open in IMG/M
3300029993\|Ga0302304_10265317	Not Available	631	Open in IMG/M
3300030617\|Ga0311356_12057106	Not Available	503	Open in IMG/M
3300030618\|Ga0311354_10238749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1916	Open in IMG/M
3300030707\|Ga0310038_10378193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	621	Open in IMG/M
3300030760\|Ga0265762_1175758	Not Available	524	Open in IMG/M
3300031525\|Ga0302326_13556488	Not Available	516	Open in IMG/M
3300031543\|Ga0318516_10328020	Not Available	884	Open in IMG/M
3300031573\|Ga0310915_10742877	Not Available	692	Open in IMG/M
3300031708\|Ga0310686_103554807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	577	Open in IMG/M
3300031718\|Ga0307474_11383612	Not Available	555	Open in IMG/M
3300031768\|Ga0318509_10171266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1203	Open in IMG/M
3300031912\|Ga0306921_12437875	Not Available	545	Open in IMG/M
3300031941\|Ga0310912_10864749	Not Available	697	Open in IMG/M
3300032059\|Ga0318533_11117490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	577	Open in IMG/M
3300032160\|Ga0311301_10786444	Not Available	1311	Open in IMG/M
3300032180\|Ga0307471_103193929	Not Available	581	Open in IMG/M
3300032261\|Ga0306920_102117020	Not Available	785	Open in IMG/M
3300032515\|Ga0348332_11034294	Not Available	587	Open in IMG/M
3300032898\|Ga0335072_10247357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	2054	Open in IMG/M
3300032955\|Ga0335076_10481956	Not Available	1124	Open in IMG/M
3300033158\|Ga0335077_11740480	Not Available	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.35%
Host-Associated	Host-Associated	8.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.96%
Aquatic	Environmental → Aquatic	15.38%
Plants	Host-Associated → Plants	5.77%
Arthropoda	Host-Associated → Arthropoda	1.92%
Fungi	Host-Associated → Fungi	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.15%
Freshwater	Environmental → Aquatic → Freshwater	15.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Peat	Environmental → Terrestrial → Peat	3.85%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Mycelium	Host-Associated → Fungi → Mycelium	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.42%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011067	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 41 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100793732	3300001471	Forest Soil	MFMRTQRDVMVRALAEEALALASVALFLAMVAIWVQVLGVV*
Ga0062389_1035918971	3300004092	Bog Forest Soil	MTQGRNLMVRAVAEEALALASMALFLGMVAVWVQVLGVV*
Ga0066388_1032481971	3300005332	Tropical Forest Soil	MFLIKRRGIMVRAVAEEALALASVSLFLAMVAVWVQVLGVI*
Ga0070738_103794342	3300005531	Surface Soil	TLFPLCTKDSRVMFRTMFEEATALASISLFLATVAVWVRVLGGI*
Ga0070731_107592352	3300005538	Surface Soil	CSMTQGRNIMVRAVAEEALALASMALFLGMVAVWVQVLGVV*
Ga0070672_1006009632	3300005543	Miscanthus Rhizosphere	MGSTMVRSVVEEACALTSIALFLAMVAVWAQVLGVI*
Ga0066903_1060369252	3300005764	Tropical Forest Soil	MLTGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLGVV*
Ga0074062_125466571	3300006606	Soil	SVPCMGRGTMVRAVAEEALALASVTLFLAMVAVWVQVLVVI*
Ga0079220_103112202	3300006806	Agricultural Soil	SKVMVRRVFEEAAALASITLFLATVAVWVQVLGVI*
Ga0116108_100666610	3300009519	Peatland	MFVLHEGEKHMVRVVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0116108_10412772	3300009519	Peatland	EGKKTMVRTVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0116218_13348562	3300009522	Peatlands Soil	MFPFRSLKGRKTMVRVVAEEALALASVTLFLAMVAVWAQVLGVI*
Ga0116221_11293572	3300009523	Peatlands Soil	RSLKGRKTMVRVVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0105237_119614212	3300009545	Corn Rhizosphere	LCSEVKGRHIMVRAVVEEALALTSVSLFLAMVAVWVQVLGVI*
Ga0116110_12930862	3300009643	Peatland	METIMVRAVAEEALALASITLFLAMVAVWAQVLGVV*
Ga0116224_101026672	3300009683	Peatlands Soil	YKREGLMVRAVAEEALALASISLFLAMVAVWAQVLGVV*
Ga0116216_100575032	3300009698	Peatlands Soil	PYSFYYTKGRGNMVRAVAEEALALTSITLFLAMVAVWVQVLGVA*
Ga0116217_105506471	3300009700	Peatlands Soil	HERRERAMVRAVAEEALALASITLFLAMVAVWAQVLGVV*
Ga0116134_12647062	3300009764	Peatland	RKTMVRTVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0123355_113314542	3300009826	Termite Gut	MFEREADMVRIVLEEAFALASLTLFLASVAVWVQVLGLAM*
Ga0116223_108782091	3300009839	Peatlands Soil	FYTKGRKTMVRAVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0123356_137111701	3300010049	Termite Gut	MFKNGRLGMVRIVLEEAFALASLTLFLASVAVWVQVLGLAM*
Ga0126381_1044706281	3300010376	Tropical Forest Soil	MFRVKGRQIMVRAVVEEALALTSVLLFLAMVAVWVQVLGVI*
Ga0126381_1044735311	3300010376	Tropical Forest Soil	MFLVKRRGIMVRAVAEEALALASVSLFLAMVAVWVQVLGVI*
Ga0136449_1003131172	3300010379	Peatlands Soil	LFHAMGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLGVV*
Ga0136449_1007887101	3300010379	Peatlands Soil	MFPFRSLKGRKTMVRVVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0136449_1009125992	3300010379	Peatlands Soil	MGRSTMVCAVAEEAVALASVTLFLAMVAIWAQVLGVV*
Ga0136449_1016848731	3300010379	Peatlands Soil	MFVLHEGEKHMVRVVAEEALALASVTLFLAMVAIWAQ
Ga0136449_1025305702	3300010379	Peatlands Soil	MKGERVMVRAVAEEALALASITLFLAMVAVWAQVLGVV*
Ga0136449_1027832112	3300010379	Peatlands Soil	EKHMVRAVAEEALALASVTLFLAMVAVWAQVLGVI*
Ga0126383_122909272	3300010398	Tropical Forest Soil	MFLKRRGIMVRAVAEEALAIASVSLFLAMVAVWVQVLGVI*
Ga0138594_10193411	3300011067	Peatlands Soil	EGEKHMVRAVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0105246_121350501	3300011119	Miscanthus Rhizosphere	IGESIMVRAVVEEAGALASIALFMAMVAVWAQVLGVI*
Ga0153924_11303382	3300012089	Attine Ant Fungus Gardens	MGSIMVRAVVVEACALTSITLFLAMVAVWAQVLGVI*
Ga0157374_115355883	3300013296	Miscanthus Rhizosphere	IRSSRRRVMVRAVAVEVLALASVSLFVAMIAVWTQVLSVV*
Ga0181518_103089591	3300014156	Bog	EGEKHMVRAVAEEALALASVTLFLAMVAVWAQVLGVI*
Ga0181532_103185022	3300014164	Bog	MGRKTMVRAVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0181532_103554741	3300014164	Bog	KTMVRTVAEEALALASVTLFLAMVAIWAQVLGVV*
Ga0132257_1041786772	3300015373	Arabidopsis Rhizosphere	VLFMFGVKGRRIMVRAVVEEALALTSVSLFLAMVAVWVQLLGVI*
Ga0182036_104642702	3300016270	Soil	SMLTGRDIMVRAIAEEALALASVTLFLAMVAVWVQVLGVV
Ga0182033_106079132	3300016319	Soil	MFLVKRRGIMVRAVAEEALALASVSLFLAMVAVWAQVFGVI
Ga0182033_110836202	3300016319	Soil	MFQAMGRNTMVRALAKEALALTSVSLFLAIVAVWVQVLGVVV
Ga0182035_112059352	3300016341	Soil	MLTGRDIMVRAVAEEALAIASVTLFLAMVTVWVQVLGVV
Ga0182035_121800142	3300016341	Soil	MFLFCSARGIMVRAVAEEALALASISLFLAMVAVWAQVLGVV
Ga0182037_106793401	3300016404	Soil	YVLSLFHATGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLVVV
Ga0182039_122654501	3300016422	Soil	LEKRRGIMVRAVAEEALALASVSLFLAMVAVWAQVLGVI
Ga0182038_111572721	3300016445	Soil	MFPIRSSRRRVMVRAVAVEVLALASVSLFVAMIAVWTQVLIAV
Ga0187818_105441981	3300017823	Freshwater Sediment	MGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLGVV
Ga0187877_11933032	3300017931	Peatland	MFVLHEGEKHMVRVVAEEALALASVTLFLAMVAIWAQVLGVV
Ga0187819_104881301	3300017943	Freshwater Sediment	SRRVGRETMVRAVAEEALALASVTLFLAMVAVWVQILGVV
Ga0187783_105989231	3300017970	Tropical Peatland	MFRVKGRGIMVRAVAEEALALASVSLFLAMVAIWVQVLGVI
Ga0187783_106000823	3300017970	Tropical Peatland	MFHAIGRHIMVRAVAEEALALASVSLFLAMVAVWVQVLGVV
Ga0187783_106200701	3300017970	Tropical Peatland	MFQAMGRNIMVRAVAEEALALTSVSLFLAMVAIWVQVLGVVV
Ga0187781_100300353	3300017972	Tropical Peatland	MFFFRSGKGRDIMVRAVAEEALALTSITLFLAMVVVWAQVLGVI
Ga0187781_103702461	3300017972	Tropical Peatland	MGRNIMVRAVAEEALALTSVSLFLAMVAIWVQVLGVVV
Ga0187781_111320351	3300017972	Tropical Peatland	GREVMVRAVTEEALALASITLFLAMVAVWAQVLGVI
Ga0187780_103991011	3300017973	Tropical Peatland	MFQAMGRNIMVRAVAEEALALTSVSLFLAMVAVWVQVLGVVV
Ga0187782_103637372	3300017975	Tropical Peatland	MKGEIVMVRAVVEEALALASITLFLGMIAVWAQVLGVV
Ga0187782_104141392	3300017975	Tropical Peatland	MIGPTTQGRGFMVRALAAEALALASMTLFLAMVAVWVQVLGVV
Ga0187782_106786002	3300017975	Tropical Peatland	MNPLPKGGVMVRAVVEEALALASITLFLGTIAVWVQVLGVM
Ga0187876_11898922	3300018003	Peatland	MFVLHEGEKHMVRAVAEEALALASVTLFLAMVAIWAQVLGVV
Ga0187804_104829282	3300018006	Freshwater Sediment	LEMGSIMVRAVVEEACALASIALFLAMVAVWVQVLGVI
Ga0187867_103397822	3300018033	Peatland	RKTMVRTVAEEALALASVTLFLAMVAIWAQVLGVV
Ga0187784_112005822	3300018062	Tropical Peatland	FLRSWEGQMVRALVQEALALASLSLFLAMVAVWVQVLGVI
Ga0187797_12077682	3300019284	Peatland	GAGEQVMVRAVAEEALAITSVSLFLAMVAVWVQVLGVV
Ga0210407_100433531	3300020579	Soil	PFMGRGTMVRAVAEEALALASVTLFLAMVAVWVQVLVVI
Ga0210395_102569631	3300020582	Soil	MFMRTQRDVMVRALAEEALALASVALFLAMVAIWVQVLGVV
Ga0210401_101832382	3300020583	Soil	MFMRTERDVMVRALAEEALALASVALFLAMVAIWVQVLGVV
Ga0210405_101539642	3300021171	Soil	CMGRGTMVRAVAEEALALASVTLFLAMVAVWVQVLVVI
Ga0210396_102562002	3300021180	Soil	MFHADGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLGVV
Ga0210397_100350401	3300021403	Soil	SSRRRAMVRVVAVEVLALASVSLFVAMVAVWTQVLSVG
Ga0210397_114185871	3300021403	Soil	EGLVMVRAVTEEALALASLTLFLAMVAVWAEVLGVL
Ga0210394_103219652	3300021420	Soil	RSVRIRGQIMVRSVVEEALALASISLFLATLAVWAQVLGVI
Ga0210394_110316522	3300021420	Soil	MTQGRNLMVRAVAEEALALASMALFLGMVAVWVQVLGVV
Ga0242659_11239821	3300022522	Soil	RTRGQIMVRSVVEEALALASISLFLATLAVWAQVLGVI
Ga0208455_10596392	3300025453	Peatland	FVLDEGKKTMVRTVAEEALALASVTLFLAMVAIWAQVLGVV
Ga0208562_11053032	3300025460	Peatland	LFVLHEGRSTMVRAVAEEALALASVTLFLAMVAIWAQVLGVV
Ga0207649_107227142	3300025920	Corn Rhizosphere	RGAEANGSTMVRSVVEEACALTSIALFLAMVAVWAQVLGVI
Ga0208044_11440242	3300027625	Peatlands Soil	TKGRGNMVRAVAEEALALTSITLFLAMVAVWVQVLGVA
Ga0209009_12019351	3300027667	Forest Soil	KRKGRDIMVRAVAEEALALTSITLFLAMVAVWAQVLGVV
Ga0209274_105204312	3300027853	Soil	KEQVMVRAVAEEALALASVTLFLAMVAVWAQVLGVV
Ga0308309_102849821	3300028906	Soil	PLCSCIGRGTMVRAVAEEALALASVTLFLAMVAVWVQVLVVI
Ga0222749_105820683	3300029636	Soil	MFPICSSRRRAMVRVVAVEVLALASVSLFVAMVAVWAQVFSVV
Ga0302304_102653171	3300029993	Palsa	EGRTVMVKSVVEEAVALASITLFLAMVAVWTQVLGVL
Ga0311356_120571062	3300030617	Palsa	GRTVMVKSVVEEAVALASITLFLAMVAVWTQVLGVL
Ga0311354_102387491	3300030618	Palsa	CSRLEGRIVMVKSVVEEAVALASITLFLAMVAVWTQVLGVL
Ga0310038_103781931	3300030707	Peatlands Soil	SKRGERLMVRAVAEEALALASISLFLAMVAVWAQVLGVV
Ga0265762_11757581	3300030760	Soil	HKTKGRTVMMKSFVEEAMALASITLFLAMVAVWTQVLGVL
Ga0302326_135564881	3300031525	Palsa	FWRYVMFRAVAEEALALASITLFLAMVAVWAQLLAVV
Ga0318516_103280201	3300031543	Soil	MFSLCSMLTGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLVVV
Ga0310915_107428771	3300031573	Soil	FLVTGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLGVV
Ga0310686_1035548072	3300031708	Soil	MNAGENLMVRAVAEEALALASMALFLGMVAVWVQVLGVV
Ga0307474_113836121	3300031718	Hardwood Forest Soil	MFTLRSEAEGRDIMVRAVAEEALALASIALFLGMVAVWVQVLGVV
Ga0318509_101712662	3300031768	Soil	VLRSFRERVMVRAVAEEAMALASLSLFLAMVAVWAQVLGVL
Ga0306921_124378752	3300031912	Soil	MFPLCSMLTGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLGVV
Ga0310912_108647492	3300031941	Soil	MLTGRDIMVRAVAEEALALASVTLFLAMVAVWVQVLGVV
Ga0318533_111174901	3300032059	Soil	GRVMVRAVAEEAMALASLSLFLAMVAVWAQVLGVL
Ga0311301_107864442	3300032160	Peatlands Soil	FHAMGRDTMVRAVAEEALALASITLFLAMVAVWVQVLVVI
Ga0307471_1031939292	3300032180	Hardwood Forest Soil	GLKIMVRAVAEEALALASLTLFLAMVAVWAEVLGVL
Ga0306920_1021170201	3300032261	Soil	LSVRVGRRVMVRAVAVEVLALASVSLFVAMVAVWTQLLV
Ga0348332_110342942	3300032515	Plant Litter	GIVMVRNVAEEALALASLTLFLAMVAVWAQVLGVL
Ga0335072_102473571	3300032898	Soil	MFMRTQGDVMVRALAEEALALASVALFLAMVAIWVQVLGVV
Ga0335076_104819562	3300032955	Soil	MFRVKGRRIMVRAVVEEALALTSVSLFLAMVAVWVQVLGVI
Ga0335077_117404801	3300033158	Soil	RSAMGSKMVRAVIEEALALTSLTLFLAMVAVWAQVFGVI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097274

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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