Metagenome / Metatranscriptome Family F097260

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097260
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	103 residues
Representative Sequence	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Number of Associated Samples	58
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.81 %
% of genes near scaffold ends (potentially truncated)	41.35 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (56.731 % of family members)
Environment Ontology (ENVO)	Unclassified (56.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.91% β-sheet: 28.30% Coil/Unstructured: 36.79%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03989	DNA_gyraseA_C	51.92
PF12089	DUF3566	15.38
PF08241	Methyltransf_11	0.96
PF00535	Glycos_transf_2	0.96
PF13738	Pyr_redox_3	0.96
PF03567	Sulfotransfer_2	0.96
PF02348	CTP_transf_3	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	51.92
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.38 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65.38 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	58.65 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	11.54 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	8.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	11.54 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	6.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	6.73 %
Ilumatobacter nonamiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	2.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004369\|Ga0065726_15808	All Organisms → cellular organisms → Bacteria	13709	Open in IMG/M
3300004369\|Ga0065726_16893	Not Available	12111	Open in IMG/M
3300005512\|Ga0074648_1079847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1235	Open in IMG/M
3300005611\|Ga0074647_1003747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	4131	Open in IMG/M
3300006025\|Ga0075474_10116177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	856	Open in IMG/M
3300006025\|Ga0075474_10121150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300006025\|Ga0075474_10125986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	814	Open in IMG/M
3300006025\|Ga0075474_10132274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300006025\|Ga0075474_10204037	Not Available	605	Open in IMG/M
3300006026\|Ga0075478_10257811	Not Available	521	Open in IMG/M
3300006637\|Ga0075461_10007595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	3588	Open in IMG/M
3300006637\|Ga0075461_10107127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	876	Open in IMG/M
3300006637\|Ga0075461_10233057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	544	Open in IMG/M
3300006867\|Ga0075476_10148121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	877	Open in IMG/M
3300006867\|Ga0075476_10155317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300006867\|Ga0075476_10200287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	727	Open in IMG/M
3300006867\|Ga0075476_10342438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300006867\|Ga0075476_10360541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	501	Open in IMG/M
3300006870\|Ga0075479_10169239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	887	Open in IMG/M
3300007234\|Ga0075460_10076523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1225	Open in IMG/M
3300007623\|Ga0102948_1200469	Not Available	607	Open in IMG/M
3300008012\|Ga0075480_10419364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	656	Open in IMG/M
3300008012\|Ga0075480_10523087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	569	Open in IMG/M
3300008012\|Ga0075480_10524180	Not Available	568	Open in IMG/M
3300010297\|Ga0129345_1128254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	925	Open in IMG/M
3300010299\|Ga0129342_1190499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	732	Open in IMG/M
3300010299\|Ga0129342_1304253	Not Available	547	Open in IMG/M
3300010300\|Ga0129351_1123682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1030	Open in IMG/M
3300010300\|Ga0129351_1202644	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300010318\|Ga0136656_1079312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1162	Open in IMG/M
3300010318\|Ga0136656_1094936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1049	Open in IMG/M
3300010370\|Ga0129336_10065143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2162	Open in IMG/M
3300016747\|Ga0182078_10441085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	547	Open in IMG/M
3300017949\|Ga0181584_10616816	Not Available	655	Open in IMG/M
3300017951\|Ga0181577_10413221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	856	Open in IMG/M
3300017952\|Ga0181583_10253240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1135	Open in IMG/M
3300017952\|Ga0181583_10452023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	792	Open in IMG/M
3300017952\|Ga0181583_10487128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	756	Open in IMG/M
3300017952\|Ga0181583_10696833	Not Available	604	Open in IMG/M
3300017952\|Ga0181583_10855994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	532	Open in IMG/M
3300017956\|Ga0181580_10702903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	643	Open in IMG/M
3300017956\|Ga0181580_10891429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	555	Open in IMG/M
3300017957\|Ga0181571_10357678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	911	Open in IMG/M
3300017958\|Ga0181582_10649440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	640	Open in IMG/M
3300017962\|Ga0181581_10627361	Not Available	652	Open in IMG/M
3300017962\|Ga0181581_10793648	Not Available	564	Open in IMG/M
3300017964\|Ga0181589_10344419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	994	Open in IMG/M
3300017964\|Ga0181589_10407347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	895	Open in IMG/M
3300017967\|Ga0181590_11054151	Not Available	528	Open in IMG/M
3300017968\|Ga0181587_10663875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	661	Open in IMG/M
3300017968\|Ga0181587_10774781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	600	Open in IMG/M
3300017968\|Ga0181587_10855249	Not Available	565	Open in IMG/M
3300017985\|Ga0181576_10328484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	968	Open in IMG/M
3300017986\|Ga0181569_10514923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	807	Open in IMG/M
3300017986\|Ga0181569_11054704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	522	Open in IMG/M
3300018039\|Ga0181579_10064281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2391	Open in IMG/M
3300018039\|Ga0181579_10460936	Not Available	676	Open in IMG/M
3300018039\|Ga0181579_10501108	Not Available	640	Open in IMG/M
3300018049\|Ga0181572_10633762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	647	Open in IMG/M
3300018415\|Ga0181559_10145295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1400	Open in IMG/M
3300018417\|Ga0181558_10184503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1208	Open in IMG/M
3300018418\|Ga0181567_10408371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	899	Open in IMG/M
3300018421\|Ga0181592_10529770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	810	Open in IMG/M
3300018423\|Ga0181593_10908457	Not Available	609	Open in IMG/M
3300018424\|Ga0181591_10508316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	877	Open in IMG/M
3300018424\|Ga0181591_10756985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	678	Open in IMG/M
3300018424\|Ga0181591_10807921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	651	Open in IMG/M
3300018426\|Ga0181566_10316355	Not Available	1125	Open in IMG/M
3300018428\|Ga0181568_10385868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1131	Open in IMG/M
3300020054\|Ga0181594_10036910	All Organisms → cellular organisms → Bacteria	3404	Open in IMG/M
3300020054\|Ga0181594_10246895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	851	Open in IMG/M
3300020054\|Ga0181594_10391432	Not Available	596	Open in IMG/M
3300020168\|Ga0181588_10075673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1884	Open in IMG/M
3300020168\|Ga0181588_10150793	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300020168\|Ga0181588_10259885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	740	Open in IMG/M
3300020168\|Ga0181588_10267957	Not Available	722	Open in IMG/M
3300020168\|Ga0181588_10269857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	718	Open in IMG/M
3300020168\|Ga0181588_10273865	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300020168\|Ga0181588_10348783	Not Available	584	Open in IMG/M
3300020168\|Ga0181588_10387129	Not Available	536	Open in IMG/M
3300021364\|Ga0213859_10140055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1140	Open in IMG/M
3300021379\|Ga0213864_10478574	Not Available	625	Open in IMG/M
3300021425\|Ga0213866_10176893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1119	Open in IMG/M
3300021958\|Ga0222718_10208596	Not Available	1062	Open in IMG/M
3300021961\|Ga0222714_10050212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2897	Open in IMG/M
3300021961\|Ga0222714_10510217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	615	Open in IMG/M
3300021964\|Ga0222719_10524255	Not Available	706	Open in IMG/M
3300021964\|Ga0222719_10558284	Not Available	675	Open in IMG/M
3300022934\|Ga0255781_10312353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	707	Open in IMG/M
3300023081\|Ga0255764_10342519	Not Available	668	Open in IMG/M
3300023084\|Ga0255778_10427683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	563	Open in IMG/M
3300023115\|Ga0255760_10279049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	836	Open in IMG/M
3300023115\|Ga0255760_10447570	Not Available	583	Open in IMG/M
3300023170\|Ga0255761_10575210	Not Available	515	Open in IMG/M
3300023173\|Ga0255776_10312185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	886	Open in IMG/M
3300023173\|Ga0255776_10474006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	646	Open in IMG/M
3300023173\|Ga0255776_10648661	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300023176\|Ga0255772_10208917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1101	Open in IMG/M
3300023176\|Ga0255772_10595094	Not Available	512	Open in IMG/M
3300025630\|Ga0208004_1072270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	873	Open in IMG/M
3300025771\|Ga0208427_1040900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1742	Open in IMG/M
3300025815\|Ga0208785_1058476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1053	Open in IMG/M
3300025815\|Ga0208785_1157377	Not Available	516	Open in IMG/M
3300025818\|Ga0208542_1174036	Not Available	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.19%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.81%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	56.73%
Coastal	Environmental → Aquatic → Marine → Coastal	33.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.81%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.81%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	56.73%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	33.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.85%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.96%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	56.73%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	23.08%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	7.69%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.81%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.88%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline	1.92%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.96%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	0.96%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004369	Saline microbial communities from the South Caspian sea - cas-15	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005611	Saline surface water microbial communities from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020054	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020168	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409BT metaG (spades assembly)	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0065726_158082	3300004369	Saline	LPATDLRFRGSDGGAGFLAVICLLAVTLLASSGLITLTFVALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELVGIERDAFSAGTEVRVGRAVVRGRAALVD*
Ga0065726_1689312	3300004369	Saline	ARSSLRSHRSLRATDLRLHGCDGGAGLLAVVCLFVVTLLGSSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLINDGELLAIERDAFSASTEVRVGRAVVRGGATLVD*
Ga0074648_10798472	3300005512	Saline Water And Sediment	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVSGGELLAIERDAFSASTEVRVGRAVVRGRAALVD*
Ga0074647_10037474	3300005611	Saline Water And Sediment	LRATDLRLHGCDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID*
Ga0075474_101161771	3300006025	Aqueous	LAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVVRGRAALVD*
Ga0075474_101211502	3300006025	Aqueous	LPATDLRFRGSDGGAGLLAVVCLLAVTLLGASGLITVTTGVVEAARARIAADLGALATLNWGPAVGAEVVLVNGGELLAIERDAFSAGTQVRVGRAVVRGRAALVD*
Ga0075474_101259862	3300006025	Aqueous	LRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEAIRARTAADLGALATLNWGPVVGAAVVLVNGGELLAIERDAFSVGTEVRVGRAVVRGRAALVDRGVPMLVTWSRQSINPA*
Ga0075474_101322742	3300006025	Aqueous	LRATDPRLCGSDGGAGLLAVACLLAVTLLGASGLITVTTGVVEAARARIAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVVRGRAALVD*
Ga0075474_102040371	3300006025	Aqueous	SLRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLITLTFGALEATRVRTAADLGALATLNWGSVVGAEVVLVNGGELLAIERDAFSASTEVRVGRVGARGRAALID*
Ga0075478_102578111	3300006026	Aqueous	AVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGADVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID*
Ga0075461_100075952	3300006637	Aqueous	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID*
Ga0075461_101071272	3300006637	Aqueous	LRATDLRLHGCDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRVGARGRAALID*
Ga0075461_102330572	3300006637	Aqueous	LPATDLRLRGSDGGAGLLAVVCLFAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGADVVLVNGGELVAIERDAFSASTEVRVGWAVVRGRAALVD*
Ga0075476_101481212	3300006867	Aqueous	LPATDLRFRGSDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATHARTAADMGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVVRGRAALVD*
Ga0075476_101553172	3300006867	Aqueous	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEAIRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSVGTEVRVGRAVVRGRAALVDRGVPMLVTWSRQSINPA*
Ga0075476_102002872	3300006867	Aqueous	VVVCLIAVTLLGASGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSARTEVRVGRAVASGRAALAD*
Ga0075476_103424381	3300006867	Aqueous	LRATDLRLHGCDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID*
Ga0075476_103605411	3300006867	Aqueous	VVVYLLAVTLLGSSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVARGRAALVD*
Ga0075479_101692392	3300006870	Aqueous	RSRRSLPATDLRLHGSDGGSGLLAVVCLFAVTLIGATGLATLTFSALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID*
Ga0075460_100765233	3300007234	Aqueous	LRATDLRFHGCDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRVGARGRAALID*
Ga0102948_12004692	3300007623	Water	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRAVARGRAALVD*
Ga0075480_104193642	3300008012	Aqueous	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRGGARGRAALID*
Ga0075480_105230871	3300008012	Aqueous	LPATDLRFRGSDGGAGLLAVVCLLAVTLLGASGLITVTTGVVEAARARIAADLGALATLNWGPVVGAEVVLVNGGELLAIERDTFSAGTEVRVGRAVVRGRAALVD*
Ga0075480_105241802	3300008012	Aqueous	RRSLPATDLRLRGSDGGAGLLAVVCLIAVALLGASGLINLTFGALEATRARTAADLGALATLNWGPVVGADVVLINGGELLAIERDAFSAGTEVRVGRAVVRGRAALVD*
Ga0129345_11282542	3300010297	Freshwater To Marine Saline Gradient	LRATDLRLRGSDEGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAKVVLVNGGELLAIERDAFSASSEVRVGRAVVRGRAALID*
Ga0129342_11904991	3300010299	Freshwater To Marine Saline Gradient	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFNAGTEVRVGRAEARGRAALVD*
Ga0129342_13042531	3300010299	Freshwater To Marine Saline Gradient	LPATDLRFRGSDGGAGLLAVVCLLAVTLLGASGLITVTTGVVEAARARIAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTQVRVGRAVVRGRAALVD*
Ga0129351_11236821	3300010300	Freshwater To Marine Saline Gradient	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRV
Ga0129351_12026442	3300010300	Freshwater To Marine Saline Gradient	LPATDLRLRGSDGGAGLLAVVCLIAVALLGASGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID*
Ga0136656_10793121	3300010318	Freshwater To Marine Saline Gradient	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEAIRARTAADLGALATLNWGPAVGAEVVLVNGGELLAIERDAFSAGTQVRVGRAFVRGRAALVD*
Ga0136656_10949362	3300010318	Freshwater To Marine Saline Gradient	SDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID*
Ga0129336_100651432	3300010370	Freshwater To Marine Saline Gradient	LPATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGPEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID*
Ga0182078_104410852	3300016747	Salt Marsh	LRATKPRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0181584_106168161	3300017949	Salt Marsh	AGLLAVVGLIAVAVLGSFGLVVVTAGSADATRARVDADLAPLATLNWGPSVGAEVALANGGEGLTIERFVLSATVEVRFGGVEVVARSSYAD
Ga0181577_104132212	3300017951	Salt Marsh	LPATDLRIRGSDGGAGLLAVVYLLAVTLLGSSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVFVNGGELLAIERDAFSAGTEVRVGRAVARGRAALVD
Ga0181583_102532402	3300017952	Salt Marsh	RGSDGGAGLLAVVCLLAVTLLGSSGLITLTFSALEATRARTAADLGALATLTWGPVVGADVVLVNGGELVAIERGAFSAGTEVRVGRAVVRGRAALVD
Ga0181583_104520232	3300017952	Salt Marsh	LRATDLRLRGCDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRVGARGRAALID
Ga0181583_104871282	3300017952	Salt Marsh	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0181583_106968331	3300017952	Salt Marsh	PRSRRSLRATDLRIGGSDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALAMLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID
Ga0181583_108559942	3300017952	Salt Marsh	LRATDLRFRGSDGGAGLLAVVCLLVVTLLGASGLVTVTSGVVEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLVIERDAFSASTDVRVGWAVVRGRAALVD
Ga0181580_107029031	3300017956	Salt Marsh	LPATDLRLRGSDGGAGLLAVVCLFAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGADVVLVNGGELVAIERDAFSASTEVRVGWAVVRGRAALVD
Ga0181580_108914292	3300017956	Salt Marsh	VVVYLLAVTLLGSSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVARGRAALVD
Ga0181571_103576782	3300017957	Salt Marsh	LPATDLRLHGSDGGVGLLAVVCLFVVTLLGASGLITLTFGALDATRARTAADLGALATLNWGPVVGAEVVLVSGGELLAIERDAFSAGTEVRVGRAVVRGYTALVD
Ga0181582_106494401	3300017958	Salt Marsh	LRATDPRLCGSDGGAGLLAVACLLAVTLLGASGLITVTTGVVEAARARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTQVRVGRAVVRGRAALVD
Ga0181581_106273612	3300017962	Salt Marsh	RSSLRSHRSLRATDLRLHGCDGGAGLLAVVCLLAVALLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID
Ga0181581_107936482	3300017962	Salt Marsh	LAVVCLLAVTLFGSFGLITLTLGALEATRARTAADMGSLATLNWGPVVGAEVVLVNGGELVAIERDAFSASTEVRVGWAVVRGRAALVD
Ga0181589_103444192	3300017964	Salt Marsh	LRATDLRIGGSDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALAMLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID
Ga0181589_104073472	3300017964	Salt Marsh	LRATDLRLHGSDGGAGLLAVVCLLAVTLLGASGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSARTEVRVGRAVASGRAALAD
Ga0181590_110541512	3300017967	Salt Marsh	AVVYLLAVTLLGTSGLMTLTFGAVEATRARTASDLAALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRAVARGRATLVD
Ga0181587_106638752	3300017968	Salt Marsh	LPATDLRLHGSDGGAGLLAVVCLFAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELVAIERDAFSASTEVRVGWAVVRGRAALVD
Ga0181587_107747812	3300017968	Salt Marsh	LRATDLRLHGCDGGAGLLAVVCLFVVTLLGASGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVVSRRAALVD
Ga0181587_108552491	3300017968	Salt Marsh	RGSDGGAGLLVVVYLLAVTLLGSSGLITLTLGALEATRARTAADLGALAALNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRVVVRGRAAFVD
Ga0181576_103284841	3300017985	Salt Marsh	LPATDLRLHGSDGGAGLLSVACLIAVTLLGASGLITVTTGVVEATRARAAADLGALATLNWGPVVGAEVVLVNGGELLALERDAFSAGTQVRVGRAVVRG
Ga0181569_105149232	3300017986	Salt Marsh	LLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVVSRRAALVD
Ga0181569_110547042	3300017986	Salt Marsh	LPATDPRLCGSDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGEVLTIERFVLSATVEVRFGGVEVVARSSYAD
Ga0181579_100642811	3300018039	Salt Marsh	DGGAGLLAVIWLIAVTLLGSSGLITLTFSALEATRARTAADLGALATLNWGPVVGVDVVLVNGGELVAIERDAFSASTEVRVGWAVVRGRAALVD
Ga0181579_104609361	3300018039	Salt Marsh	GSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0181579_105011081	3300018039	Salt Marsh	RSRRYLRATDLRLRGSDGGAGLLAVVCLLAVTLLGSSGLIAVTTGVVEATRARTAADLGALATLNWGPVVGADVVLLNGGELLAIERNALSAGTEVRVGRAVVRGRAALVD
Ga0181572_106337622	3300018049	Salt Marsh	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLGIERDAFNAGTEVRVGRAVARGRAALVD
Ga0181559_101452951	3300018415	Salt Marsh	VVVYLLAVTLLGSSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSVGTEVRVGRAVVRGRAALVD
Ga0181558_101845031	3300018417	Salt Marsh	LRATDLRFHGSDGGAGLFAVVYLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVARGRAALVD
Ga0181567_104083712	3300018418	Salt Marsh	LPATDLRLRGSDGGAGLLAVVCLLAVALPGTSGLMTLTFGAVEATRARTAADLTALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRAVARGRAALVD
Ga0181592_105297702	3300018421	Salt Marsh	LRATDPRLCGSDGGAGLLAVACLLAVTLLGASGLITVTTGVVEATRARAAADLGALATLNWGPVVGAEVVLVNGGELLATERDAFSAGTEVRVGRVVVRGRAAFVD
Ga0181593_109084572	3300018423	Salt Marsh	SRRSLRATEPRLCGSDGGAGLLAVACLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVIGADVVLVNGGELLTIERDALSAGTEVRVGRAVASGRAALVD
Ga0181591_105083161	3300018424	Salt Marsh	DGGAGLLAVVCLFAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELVAIERDAFSASTEVRVGWAVVRGRAALVD
Ga0181591_107569851	3300018424	Salt Marsh	LRATDPRLCGSDGGAGLLAVACLLAVTLLGASGLITVTTGVVEAARARIAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTQVRVGRAVVRGRAALVD
Ga0181591_108079212	3300018424	Salt Marsh	LRATDLRLHGSDGGAGLLAVVCLFVVTLLGASGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVVRGRAALVD
Ga0181566_103163551	3300018426	Salt Marsh	LPATDLRLRGSDGGAGLLAVVCLFAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0181568_103858682	3300018428	Salt Marsh	LPATDLRLRGSDGGAGLLAVVCLFAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSTSTEVRVGRAVATGRAALID
Ga0181594_100369101	3300020054	Salt Marsh	RSRRSLPATDLRLRGSDGGAGLLAVVCLIAVALLGASGLITLTFGALEATRARTAADLGALATLNWGSVVGAEVVLVNGGELLAIERDAFSASTEVRVGRVGARGRAALID
Ga0181594_102468952	3300020054	Salt Marsh	LCGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGAPEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDVFSAGTEVRVGRAVVRGRAALVD
Ga0181594_103914322	3300020054	Salt Marsh	DGGAGLLAVVCLLAVTPLGASGLITLTFGALEATRARTAADLGVLATLNWGPVVGADVVLVNGGELLAIERDAFSAGTEVRVGRAVARGRAALVD
Ga0181588_100756732	3300020168	Salt Marsh	LRATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRVVVRGRAALAYSVNKRLRKTSNNRRRTRSA
Ga0181588_101507931	3300020168	Salt Marsh	DGGAGLLAVVCLLAVTLLGSFGLITLTLGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVVRGRAALVD
Ga0181588_102598852	3300020168	Salt Marsh	DLRIRGSDGGAGLLAVVYLLAVTLLGTSGLMTLTFGAVEATRARTAADLGALAMLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID
Ga0181588_102679571	3300020168	Salt Marsh	GLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0181588_102698572	3300020168	Salt Marsh	LRATDLRLRGSDGGAGLLAAVCLFAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPAVGAEVVLANGRELVAIERDAFSASTEVRVGWAVVRGRAALVD
Ga0181588_102738652	3300020168	Salt Marsh	LRATDLRFRGSDGGAGLLAVVCLLVVTLLGAAGLVTVTLGVVEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLVIERDAFSASTDVRVGWAVVRGRAALVD
Ga0181588_103487831	3300020168	Salt Marsh	LPATDLRLRGSDGGAGLLAVVCLLAVTLLGASGLINLTFGALEVTRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDVFSAGTEVRVGRAVVRGRAALVD
Ga0181588_103871292	3300020168	Salt Marsh	RLQGGDGGAGLLAVVCLFVVTLLGASGLITLTFGALEATRARTAADLGALATLNWGPVIGADVVLVNGGELLTIERDALSAGTEVRVGRAVASGRAALVD
Ga0213859_101400552	3300021364	Seawater	LPATDLRLHGSDGGAGLLAVVYLLAVTLLGASGLMTLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEV
Ga0213864_104785741	3300021379	Seawater	GGAGLLAVVCLLAVTLLGTSGLMTLTFGAVEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVARGRAALVD
Ga0213866_101768931	3300021425	Seawater	VCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVVRGRAALVD
Ga0222718_102085962	3300021958	Estuarine Water	LRATDLRLHGCDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID
Ga0222714_100502122	3300021961	Estuarine Water	LRATDLRLHGCDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPIVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID
Ga0222714_105102172	3300021961	Estuarine Water	LRATDLRLRGSDGGAGPLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGWAVVRGR
Ga0222719_105242552	3300021964	Estuarine Water	LPATKPRLRGSNGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGALLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0222719_105582841	3300021964	Estuarine Water	AGLLAVVCLIAVALLGASGLITLTFGALEATRARTAADLGALATLNWGSVVGAEVVLVNGGELLAIERDAFSASTEVRVGRVGARGRAALID
Ga0255781_103123531	3300022934	Salt Marsh	LPATDLRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGADVVLVNGGELVAIERDAFSASTEVRVGWAVVRGRAALVD
Ga0255764_103425192	3300023081	Salt Marsh	GAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSAGTEVRVGRAVARGRAALVD
Ga0255778_104276832	3300023084	Salt Marsh	LPATDLRLHGSDGGAGLLAVVCLFAVTLLGSSGLITLTFGALEATRARTAADLGALATPNWGPVVGAEVVLVNGGELVAIERDAFSASTEVRVGWAVVRGRAALVD
Ga0255760_102790492	3300023115	Salt Marsh	AVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0255760_104475701	3300023115	Salt Marsh	ARSSPRSRRSLRATDLRIGGSDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALAMLNWGPVVGAEVVLANGGELVAIERDAFSASTEVRVGRVGARGRAALID
Ga0255761_105752102	3300023170	Salt Marsh	LLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0255776_103121851	3300023173	Salt Marsh	PRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALID
Ga0255776_104740062	3300023173	Salt Marsh	MARSSPRSRRSLPATDLRLHGSDGGVGLLAVVCLFVVTLLGASGLITLTFGALEATRARTAADLGALATLNWGPVIGADVVLVNGGELLTIERDALSAGTEVRVGRAVASGRAALVD
Ga0255776_106486612	3300023173	Salt Marsh	LRATDPRLCGSDGGAGLLAVACLLAVTLLGASGLITVTTGVVEATRARAAADLGALATLNWGLVVGADVVLANGGELLTIERDAFNAGTEVRVGRAVVRGRAALVD
Ga0255772_102089172	3300023176	Salt Marsh	LRATDLRLHGCDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGSVVGAEVVLANGGELLAIERDAFSAGTEVRVGRVVVRGRAALVD
Ga0255772_105950941	3300023176	Salt Marsh	SDGGAGLLAVVCLLAVMLLGTSGLMTLTFGAVEATRARTAADLAALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRAVARGRAALVD
Ga0208004_10722702	3300025630	Aqueous	LRATDLRLHGCDGGAGLLAVVCLLAVTLLGSSGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRVGARGRAALID
Ga0208427_10409002	3300025771	Aqueous	LPATDLRLRGSDGGAGLLAVVCLFAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSASTEVRVGRAVVRGRAALVD
Ga0208785_10584762	3300025815	Aqueous	LPATKPRLRGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFNAGTEVRVGRAVARGRAAIVD
Ga0208785_11573771	3300025815	Aqueous	VVVCLIAVTLLGASGLITLTFGALEATRARTAADLGALATLNWGPVVGAEVVLVNGGELLAIERDAFSARTEVRVGRAVASGRAALAD
Ga0208542_11740361	3300025818	Aqueous	LPATKPRLHGSDGGAGLLAVVCLLAVTLLGTSGLINLTFGALEATRARTAADLGALATLNWGPVVGAEVVLANGGELLAIERDAFSAGTEVRVGRVGARGRAALID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097260

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences