Metagenome / Metatranscriptome Family F097252

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097252
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	65 residues
Representative Sequence	MPTWAAILLAVVAPGGVIVTLLERVRRENNRDHANNSEMLKQIDGKVDKIDSRLDSHIDWHAHND
Number of Associated Samples	75
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	62.50 %
% of genes near scaffold ends (potentially truncated)	21.15 %
% of genes from short scaffolds (< 2000 bps)	79.81 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.962 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (46.154 % of family members)
Environment Ontology (ENVO)	Unclassified (54.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.654 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.67% β-sheet: 0.00% Coil/Unstructured: 33.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF12850	Metallophos_2	5.77
PF01471	PG_binding_1	2.88
PF00149	Metallophos	1.92
PF13481	AAA_25	0.96
PF01541	GIY-YIG	0.96
PF16778	Phage_tail_APC	0.96
PF02467	Whib	0.96
PF02557	VanY	0.96
PF10708	DUF2510	0.96
PF13482	RNase_H_2	0.96
PF10145	PhageMin_Tail	0.96
PF01510	Amidase_2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
All Organisms	root	All Organisms	49.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Viruses	superkingdom	All Organisms → Viruses	46.15 %
cellular organisms	root	All Organisms → cellular organisms	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	12.50 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	6.73 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.96 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.96 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.50 %
Freshwater phage uvFW-CGR-AMD-COM-C429	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	6.73 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	0.96 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.50 %
Freshwater phage uvFW-CGR-AMD-COM-C429	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	6.73 %
Desertimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas	0.96 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.96 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.12 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.50 %
Freshwater phage uvFW-CGR-AMD-COM-C429	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	6.73 %
Mesorhizobium sp. BR1-1-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. BR1-1-3	0.96 %
Desertimonas flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	0.96 %
Microbacterium oxydans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium oxydans	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10079482	Not Available	1304	Open in IMG/M
3300005512\|Ga0074648_1063570	All Organisms → Viruses → Predicted Viral	1497	Open in IMG/M
3300005512\|Ga0074648_1111570	Not Available	929	Open in IMG/M
3300006025\|Ga0075474_10001642	Not Available	9416	Open in IMG/M
3300006025\|Ga0075474_10033609	All Organisms → Viruses → Predicted Viral	1794	Open in IMG/M
3300006025\|Ga0075474_10042635	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	1557	Open in IMG/M
3300006026\|Ga0075478_10215100	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	584	Open in IMG/M
3300006027\|Ga0075462_10050077	All Organisms → Viruses → Predicted Viral	1328	Open in IMG/M
3300006637\|Ga0075461_10037843	All Organisms → Viruses → Predicted Viral	1579	Open in IMG/M
3300006637\|Ga0075461_10242433	Not Available	530	Open in IMG/M
3300006802\|Ga0070749_10015140	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	4910	Open in IMG/M
3300006802\|Ga0070749_10064515	Not Available	2206	Open in IMG/M
3300006802\|Ga0070749_10343710	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	830	Open in IMG/M
3300006802\|Ga0070749_10442072	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	713	Open in IMG/M
3300006810\|Ga0070754_10001056	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	22825	Open in IMG/M
3300006810\|Ga0070754_10385713	Not Available	615	Open in IMG/M
3300006810\|Ga0070754_10530138	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M
3300006874\|Ga0075475_10200172	Not Available	856	Open in IMG/M
3300006874\|Ga0075475_10403382	Not Available	549	Open in IMG/M
3300006916\|Ga0070750_10071614	Not Available	1642	Open in IMG/M
3300006916\|Ga0070750_10148633	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	1061	Open in IMG/M
3300006919\|Ga0070746_10293042	Not Available	749	Open in IMG/M
3300006919\|Ga0070746_10449302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. BR1-1-3	572	Open in IMG/M
3300007236\|Ga0075463_10134818	Not Available	797	Open in IMG/M
3300007236\|Ga0075463_10175209	Not Available	692	Open in IMG/M
3300007345\|Ga0070752_1024832	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	2983	Open in IMG/M
3300007346\|Ga0070753_1001384	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13716	Open in IMG/M
3300007538\|Ga0099851_1000852	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12814	Open in IMG/M
3300007538\|Ga0099851_1049939	All Organisms → Viruses → Predicted Viral	1644	Open in IMG/M
3300007538\|Ga0099851_1063300	Not Available	1441	Open in IMG/M
3300007539\|Ga0099849_1185868	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	788	Open in IMG/M
3300007542\|Ga0099846_1124946	Not Available	937	Open in IMG/M
3300008012\|Ga0075480_10075675	All Organisms → Viruses → Predicted Viral	1923	Open in IMG/M
3300009000\|Ga0102960_1101033	All Organisms → Viruses → Predicted Viral	1050	Open in IMG/M
3300009124\|Ga0118687_10044777	All Organisms → Viruses → Predicted Viral	1472	Open in IMG/M
3300010296\|Ga0129348_1141377	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	836	Open in IMG/M
3300010296\|Ga0129348_1200712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	679	Open in IMG/M
3300010296\|Ga0129348_1224004	Not Available	636	Open in IMG/M
3300010299\|Ga0129342_1302866	Not Available	549	Open in IMG/M
3300010299\|Ga0129342_1353287	Not Available	500	Open in IMG/M
3300010316\|Ga0136655_1148331	Not Available	700	Open in IMG/M
3300010318\|Ga0136656_1264609	Not Available	564	Open in IMG/M
3300010354\|Ga0129333_11212345	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	626	Open in IMG/M
3300016743\|Ga0182083_1029095	Not Available	519	Open in IMG/M
3300016745\|Ga0182093_1641674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	615	Open in IMG/M
3300017818\|Ga0181565_10007182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8516	Open in IMG/M
3300017818\|Ga0181565_10061454	All Organisms → Viruses → Predicted Viral	2698	Open in IMG/M
3300017949\|Ga0181584_10089348	All Organisms → Viruses → Predicted Viral	2119	Open in IMG/M
3300017950\|Ga0181607_10095390	All Organisms → Viruses → Predicted Viral	1889	Open in IMG/M
3300017951\|Ga0181577_10003294	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12511	Open in IMG/M
3300017951\|Ga0181577_10422664	Not Available	844	Open in IMG/M
3300017952\|Ga0181583_10118881	All Organisms → Viruses → Predicted Viral	1791	Open in IMG/M
3300017952\|Ga0181583_10272899	Not Available	1084	Open in IMG/M
3300017952\|Ga0181583_10386114	Not Available	874	Open in IMG/M
3300017956\|Ga0181580_10183443	Not Available	1479	Open in IMG/M
3300017957\|Ga0181571_10319116	Not Available	976	Open in IMG/M
3300017958\|Ga0181582_10032181	All Organisms → Viruses → Predicted Viral	4083	Open in IMG/M
3300017958\|Ga0181582_10196015	All Organisms → Viruses → Predicted Viral	1378	Open in IMG/M
3300017960\|Ga0180429_10094978	All Organisms → Viruses → Predicted Viral	2006	Open in IMG/M
3300017967\|Ga0181590_10211914	Not Available	1449	Open in IMG/M
3300017987\|Ga0180431_10294234	All Organisms → Viruses → Predicted Viral	1189	Open in IMG/M
3300018039\|Ga0181579_10075021	All Organisms → Viruses → Predicted Viral	2173	Open in IMG/M
3300018039\|Ga0181579_10565162	Not Available	592	Open in IMG/M
3300018049\|Ga0181572_10829630	Not Available	550	Open in IMG/M
3300018065\|Ga0180430_10070234	All Organisms → Viruses → Predicted Viral	2393	Open in IMG/M
3300018418\|Ga0181567_10308476	Not Available	1063	Open in IMG/M
3300018424\|Ga0181591_10392876	Not Available	1035	Open in IMG/M
3300019937\|Ga0194022_1001615	Not Available	2951	Open in IMG/M
3300021425\|Ga0213866_10004358	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9375	Open in IMG/M
3300021957\|Ga0222717_10084009	All Organisms → Viruses → Predicted Viral	2010	Open in IMG/M
3300021959\|Ga0222716_10524278	Not Available	661	Open in IMG/M
3300021960\|Ga0222715_10160697	Not Available	1383	Open in IMG/M
3300021960\|Ga0222715_10206032	Not Available	1173	Open in IMG/M
3300021961\|Ga0222714_10048177	Not Available	2977	Open in IMG/M
3300021962\|Ga0222713_10417460	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	822	Open in IMG/M
3300021964\|Ga0222719_10359749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium oxydans	920	Open in IMG/M
3300022050\|Ga0196883_1018194	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	842	Open in IMG/M
3300022057\|Ga0212025_1008164	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1495	Open in IMG/M
3300022057\|Ga0212025_1029363	Not Available	921	Open in IMG/M
3300022065\|Ga0212024_1042235	Not Available	792	Open in IMG/M
3300022068\|Ga0212021_1028955	All Organisms → Viruses → Predicted Viral	1074	Open in IMG/M
3300022071\|Ga0212028_1059321	Not Available	716	Open in IMG/M
3300022168\|Ga0212027_1010276	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1286	Open in IMG/M
3300022176\|Ga0212031_1036086	Not Available	813	Open in IMG/M
3300022198\|Ga0196905_1055622	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1115	Open in IMG/M
3300022200\|Ga0196901_1213244	Not Available	614	Open in IMG/M
3300022934\|Ga0255781_10353167	Not Available	643	Open in IMG/M
3300023175\|Ga0255777_10431456	Not Available	701	Open in IMG/M
3300023176\|Ga0255772_10368808	Not Available	734	Open in IMG/M
3300023273\|Ga0255763_1262047	Not Available	638	Open in IMG/M
3300025647\|Ga0208160_1037817	All Organisms → Viruses → Predicted Viral	1429	Open in IMG/M
3300025810\|Ga0208543_1020525	Not Available	1678	Open in IMG/M
3300025840\|Ga0208917_1062716	All Organisms → Viruses → Predicted Viral	1439	Open in IMG/M
3300025853\|Ga0208645_1099764	Not Available	1205	Open in IMG/M
3300025889\|Ga0208644_1071647	Not Available	1812	Open in IMG/M
3300027917\|Ga0209536_100879832	All Organisms → Viruses → Predicted Viral	1107	Open in IMG/M
3300027917\|Ga0209536_101161471	Not Available	948	Open in IMG/M
3300027917\|Ga0209536_103060076	Not Available	537	Open in IMG/M
3300031539\|Ga0307380_10486709	Not Available	1089	Open in IMG/M
3300031566\|Ga0307378_10684552	Not Available	884	Open in IMG/M
3300031578\|Ga0307376_10390389	Not Available	916	Open in IMG/M
3300034374\|Ga0348335_011395	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	4835	Open in IMG/M
3300034375\|Ga0348336_026711	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C429	2818	Open in IMG/M
3300034375\|Ga0348336_113703	Not Available	883	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.12%
Terrestrial	Environmental → Terrestrial	2.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	89.42%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	5.77%
Soil	Environmental → Terrestrial → Soil	2.88%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	54.81%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	24.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.73%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.88%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.88%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	2.88%
Clay	Environmental → Terrestrial → Soil → Clay	2.88%
River	Environmental → Aquatic → Freshwater → River	0.96%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	54.81%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	24.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.73%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.88%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	2.88%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.88%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	1.92%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	46.15%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	24.04%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	7.69%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	6.73%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	2.88%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	2.88%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.88%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	1.92%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.96%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.96%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.96%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.96%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300016743	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017960	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_S_1 metaG	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017987	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaG	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018065	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_S_2 metaG	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019937	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW29Aug16_MG	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022168	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)	Environmental	Open in IMG/M
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100794822	3300000116	Marine	MPTWAAVLLAVVAPGGVIVTLLERVRRENSRDHATNSEMLKQIDGKVDKIDSRLDSHIDWHAHND*
Ga0074648_10635703	3300005512	Saline Water And Sediment	MPTWAAVLIAVVAPGGIIVTLLERVRRENNRDHANNSELLKRIDGKVDKIDTRLDSHIDWHAHND*
Ga0074648_11115701	3300005512	Saline Water And Sediment	MPTWAAVLIAVVAPGGIIVSLLERVRRENNRDHANNSELLKQIDGKVDKIDSRLDSHIDWHAHND*
Ga0075474_100016423	3300006025	Aqueous	VPTWAVIVLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD*
Ga0075474_100336093	3300006025	Aqueous	MPTWLAIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK*
Ga0075474_100426355	3300006025	Aqueous	MPTWAVILLAVVAPGGVIVTLLERVRRENNRDHAYNSNLLRRIDGKVDRIGDRLSDHLEWHLDNHETEESA*
Ga0075478_102151001	3300006026	Aqueous	VVPTWLAIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK*
Ga0075462_100500773	3300006027	Aqueous	MPTWAAILVAVLAPSGIVVTLIERVRRENNRDHGRNSQMLSQIDSKVDKIDTRLDSHIDWHAHKDD*
Ga0075461_100378434	3300006637	Aqueous	MPAWATVLIAFLAPGGVLVALIERMRKENNRDHNRNSDLLRGIDTKVDRIDTRLDGHIDWHAHKEDD*
Ga0075461_102424332	3300006637	Aqueous	MPTWAAVLLAVVAPGGVIVTLLERVRRENSRDHATNSQMLKQIDGKVDKIDSRLDSHIDWHAHND*
Ga0070749_100151406	3300006802	Aqueous	MPTWAVILLAVVAPGGVIVTLLERARRENNRDHAYNSNLLRRIDGKVDRIGDRLSDHLEWHLDNHETEESA*
Ga0070749_100645155	3300006802	Aqueous	MPTWLVIILAVLAPGGVITALIERTRRENNRDHAKNADLLHRIDGKVDKIDSRLDSHIDWHAHNDD*
Ga0070749_103437102	3300006802	Aqueous	MPTWAAILVAVLAPSGIVVTLIERVRRENNRDHGRNSQMLSQIDSKVDKIDNRLDSHIDWHAHKDD*
Ga0070749_104420722	3300006802	Aqueous	VPTWLAIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK*
Ga0070754_1000105623	3300006810	Aqueous	MPTWLAVVLAVVAPGGVIVTMLEKVRRENTRDHAANSDLLRRIDHKVDRIDERMSDHLEWHLEQDPQK*
Ga0070754_103857132	3300006810	Aqueous	MPIWSAILLAVVAPGGVLVALIEKMRRENNRDHGRNAHMLRQIDSKVDKIDGRLDSHIDWHAHKD*
Ga0070754_105301381	3300006810	Aqueous	VPTWLAIILAVLAPGGLITVLIERTRRENNRDHARNSDLLHRIDCKVDKIDSRLDSHIDWHAHKDDK*
Ga0075475_102001721	3300006874	Aqueous	MPTWAVILLAVVAPGGVIVTLLERVRRENNRDHAYNSNLLRRIDGKVDRIGDRLSD
Ga0075475_104033822	3300006874	Aqueous	MPTWAAVLLAVVAPGGIIVTLLERVRRENSRDHATNSEMLKQIDGKVDKIDSRLDSHIDWHAHND*
Ga0070750_100716144	3300006916	Aqueous	VLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD*
Ga0070750_101486332	3300006916	Aqueous	MPTWLAVVLAVVAPGGVIVTMLEKVRRENTRDHAANTDLLRRTDHKVDRIDERMSDHLEWHLEQDPQK*
Ga0070746_102930423	3300006919	Aqueous	MPTWLAVVLAVVAPGGVIVTMLEKVRRENTRDHAANTDLLRRIDHKVDRIDERMSDHLEWHLEQDPQK*
Ga0070746_104493022	3300006919	Aqueous	MPTFLAIALAVLAPGGIIVTLIERMRRENNRDHSRNSALLQQIDSKVDKVGDRLDDHISWHLKD*
Ga0075463_101348183	3300007236	Aqueous	MPAWATVLIAFLAPGGVLVALIERMRKENNRDHNRNSDLLRGIDTKVDRIDTRLDGHIDWHAHKED
Ga0075463_101752093	3300007236	Aqueous	LLAVVAPGGIIVTLLERVRRENSRDHATNSEMLKQIDGKVDKIDSRLDSHIDWHAHND*
Ga0070752_10248321	3300007345	Aqueous	VGCDPAGGVAPGGVIVTLLERVRRENNRDHAYNSNLLRRIDGKVDRIGDRLSDHLEWHLDNHETEESA*
Ga0070753_100138411	3300007346	Aqueous	MPTWSAILLAVVAPGGVLVALIEKMRRENNRDHGRNAHMLRQIDSKVDKIDGRLDSHIDWHAHKD*
Ga0099851_10008523	3300007538	Aqueous	MPTWLVVILAVLAPGGVITALIERTRRENNRDHAKNADLLHRIDGKVDKIDSRLDSHIDWHAHNDD*
Ga0099851_10499393	3300007538	Aqueous	MPTWAAVLIAVVAPGGIIVSLLERVRRENNRDHANNSELLKRIDGKVDKIDSRLDSHIDWHAHND*
Ga0099851_10633003	3300007538	Aqueous	VIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK*
Ga0099849_11858681	3300007539	Aqueous	MPTWAAILVAVLAPSGIVVTLIERVRRENNRDHGRNNQMLSRIDSKVDKIDTRLDSHIDWHAHND
Ga0099846_11249463	3300007542	Aqueous	MPTWLVIVLAVLAPGGIITALIEKTRRENNRDHARNSTLLHSIDRKIDKVDERLHSHIEWHAHDK*
Ga0075480_100756754	3300008012	Aqueous	VPTWLAIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDDHIDWHAHKDDK*
Ga0102960_11010333	3300009000	Pond Water	MPTWAAVLIAVLAPGGIIVTLLERVRHENNRDHANNTELLKRIDGKVEKIDTRLDSHIDWHAHND*
Ga0118687_100447772	3300009124	Sediment	MPTWAAILLAVVAPGGVIVTLLERVRRENNRDHANNSEMLKQIDGKVDKIDSRLDSHIDWHAHND*
Ga0129348_11413773	3300010296	Freshwater To Marine Saline Gradient	VPTWLAIILAVLAPGGLITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK*
Ga0129348_12007122	3300010296	Freshwater To Marine Saline Gradient	MPTWAAILVAVLAPSGIVVTLIERVRRENNRDHGRNNQMLSRIDSKVDKIDTRLDSHIDWHAHKDDT*
Ga0129348_12240043	3300010296	Freshwater To Marine Saline Gradient	MPTWLAIVLAVVAPGGVIVTMLEKVRRENTRDHAANSDLLRRIDHKVDRIDERMSDHLEWHLEQDPQK*
Ga0129342_13028663	3300010299	Freshwater To Marine Saline Gradient	AVVAPGGVIVTLLERVRRENNRDHAYNSSLLRRIDGKVDRIGDRLSDHLEWHLDNHETEESA*
Ga0129342_13532872	3300010299	Freshwater To Marine Saline Gradient	MPTWLAVVLAVVAPGGVIVTMLEKVRRENTRDHAANSELLRRIDHKVDRIDERMSDHLEWHLEQDPQK*
Ga0136655_11483312	3300010316	Freshwater To Marine Saline Gradient	VPTWTVILLAVLAPGGVITVLLERLRRENNRDHNRNIELLRTIDRKVDGVSERVDDHVQWHLGRGSDR*
Ga0136656_12646091	3300010318	Freshwater To Marine Saline Gradient	MPTWLAVVLAVVAPGGVIVTMLEKVRRENTRDHAANSELLRRIDHKVDRIDERMSDHLEWHL
Ga0129333_112123452	3300010354	Freshwater To Marine Saline Gradient	MPTWLVIILAVLAPGGVITALIERTRRENNRDHAKNADLLHRIDGKVDKIDSRLDSHIDWHAHNGD*
Ga0182083_10290953	3300016743	Salt Marsh	MPAWLQIVIAVLAPSGVLVTLIERTRRENNRDHNRNSSLLQRIDGKVDKIDGRLDRHIDWHAHKENSND
Ga0182093_16416742	3300016745	Salt Marsh	MPAFLAIALAVLAPGGIIVTLIERVRRENNRDHSRNSALLQQIDNKVDKVGERMDDHIRWHLED
Ga0181565_100071828	3300017818	Salt Marsh	MPIWSAILLAVVAPGGVLVALIEKMRRENNRDHGRNAHMLRQIDSKVDKIDGRLDSHIDWHAHKD
Ga0181565_100614544	3300017818	Salt Marsh	VPTWAVIVLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0181584_100893483	3300017949	Salt Marsh	MPTWAAVLLAVVAPGGVIVTLLERVRRENSRDHATNSQMLKQIDGKVDKIDSRLDSHIDWHAHND
Ga0181607_100953904	3300017950	Salt Marsh	MPTWAAILVAVLAPSGIVVTLIERVRRENNRDHGRNSQMLSQIDSKVDKIDTRLDSHIDWHAHKDDT
Ga0181577_1000329411	3300017951	Salt Marsh	VPTWVAILLAVLAPGGIITVLLERVRRENNRDHNRNSELLQQIDGKVDKIDERLDSHIDWHAHHD
Ga0181577_104226642	3300017951	Salt Marsh	MPTWAVILLAVVAPGGVIVSLIERVRKENTRDHAANSNLLRRIDSKVDRIDERMSDHLEWHLEQNSDT
Ga0181583_101188811	3300017952	Salt Marsh	MPVWAQVVIALVAPSGVLVALIERTRRENNRDHNRNSSLLQRIDGKVDKIDGRLDRHIDWHAHKENHND
Ga0181583_102728993	3300017952	Salt Marsh	MPAWLQIVIAVLAPSGVLVTLIERTRRENNRDHNRNSSLLQQIDGKVDKIDGRLDRHIDWHAHKENSND
Ga0181583_103861142	3300017952	Salt Marsh	VLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0181580_101834433	3300017956	Salt Marsh	EMPVWAQVVIALVAPSGVLVALIERTRRENNRDHNRNSSLLQQIDGKVDKIDGRLDRHIDWHAHKENHND
Ga0181571_103191161	3300017957	Salt Marsh	SAVPTWAVIVLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0181582_100321814	3300017958	Salt Marsh	MPAWLQIVIAVLAPSGVLVTLIERTRRENNRDHNRNSSLLQQIDGKVDKIDGRLDRHIDWHAHKENHND
Ga0181582_101960153	3300017958	Salt Marsh	MPTWAAVLLAVVAPGGVIVTLLERVRRENSRDHATNSEMLKQIDGKVDKIDSRLDSHIDWHAHND
Ga0180429_100949782	3300017960	Hypersaline Lake Sediment	MPTWAAVLIAVVAPGGIIVTLLERVRRENNRDHANNTELLKRIDGKVDKIDTRLDSHIDWHAHND
Ga0181590_102119143	3300017967	Salt Marsh	MPVWAQVVIALVAPSGVLVALIERTRRENNRDHNRNSSLLQRIDGKVDKIDGRLDRHIDWHAHKENHDD
Ga0180431_102942343	3300017987	Hypersaline Lake Sediment	MPTWAAVLIAVVAPGGIIVTLLERVRRENNRDHANNSELLKRIDGKVDKIDTRLDSHIDWHAHND
Ga0181579_100750211	3300018039	Salt Marsh	LLAVVAPGGVIVTLLERVRRENSRDHATNSQMLKQIDGKVDKIDSRLDSHIDWHAHND
Ga0181579_105651621	3300018039	Salt Marsh	MPTWLAVVLAVVAPGGVIVTMLEKVRRENTRDHAANTDLLRRIDHKVDRIDERMSDHLEWHLEQDPQK
Ga0181572_108296302	3300018049	Salt Marsh	WAVIVLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0180430_100702343	3300018065	Hypersaline Lake Sediment	MPTWAAVLIAVVAPGGIIVTLLERVRRENNRDHANNTELLKRIDGKVDNIDTRLDSHIDWHAHND
Ga0181567_103084762	3300018418	Salt Marsh	VPTWAVIVLAVLAPGGVLTVLIERMRRENNRDHGRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0181591_103928765	3300018424	Salt Marsh	MPTWLAVVLAVVAPGGVIVTMLEKVRRENTRDHAANSDLLRRIDHKVDRIDERMSDHLEWHLEQDPQK
Ga0194022_10016153	3300019937	Freshwater	MPTWLVVILAVLAPGGVITALIERTRRENNRDHAKNADLLHRIDGKVDKIDSRLDSHIDWHAHNDD
Ga0213866_1000435811	3300021425	Seawater	MPTWAVILLAVVAPGGVIVTLLERVRRENNRDHAYNSSLLRRIDGKVDRIGDRLSDHLEWHLDNHETEESA
Ga0222717_100840094	3300021957	Estuarine Water	MPTWAAILLAVVAPGGVIVTLLERVRRENNRDHANNSEMLKQIDGKVDKIDSRLDSHIDWHAHND
Ga0222716_105242782	3300021959	Estuarine Water	VPTWVAILLAVLAPGGIITVLLERVRRENNRDHNRNSELLQQIDGKVDKIDERLDSHIEWHAHRD
Ga0222715_101606974	3300021960	Estuarine Water	VPTWTVILLAVLAPGGVITVLLERLRRENNRDHNRNSELLRTIDRKVDGVSERVDDHVQWHLGRRSDR
Ga0222715_102060322	3300021960	Estuarine Water	VPTWVAILLAVLAPGGIITVLLERVRRENNRDHNRNSELLQQIDGKVDKIDERLDSHMDWHAHRD
Ga0222714_100481774	3300021961	Estuarine Water	MPTWAAVLLAVVAPGGVIVTLLERVRRENNRDHATNSEMLRQIDGKVDKIDSRLDSHIDWHAHND
Ga0222713_104174603	3300021962	Estuarine Water	MPIWSAILLAVVAPGGVLVALIEKMRRENNRDHGRNAHMLRQIDSKVDKIDGRLDSHIDWHAHTD
Ga0222719_103597492	3300021964	Estuarine Water	MPTFLAIALAVLAPGGVIVTLIERVRRENNRDHSRNSALLQQIDNKVDKVGQRMDDHIHWHLED
Ga0196883_10181941	3300022050	Aqueous	VPTWLAIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDGHIDWHAHKDDK
Ga0212025_10081643	3300022057	Aqueous	VPTWLAIILAVLAPGGLITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDGHIDWHAHKDDK
Ga0212025_10293634	3300022057	Aqueous	VPTWAVIVLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHM
Ga0212024_10422352	3300022065	Aqueous	MPAWATVLIAFLAPGGVLVALIERMRKENNRDHNRNSDLLRGIDTKVDRIDTRLDGHIDWHAHKEDD
Ga0212021_10289552	3300022068	Aqueous	MPTWAAILVAVLAPSGIVVTLIERVRRENNRDHGRNSQMLSQIDSKVDKIDNRLDSHIDWHAHKDD
Ga0212028_10593213	3300022071	Aqueous	PTWAVIVLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0212027_10102763	3300022168	Aqueous	MPTWLAIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK
Ga0212031_10360863	3300022176	Aqueous	MPTWAAVLIAVVAPGGIIVSLLERVRRENNRDHANNSELLKRIDGKVDKIDTRLDSHIDWHAHND
Ga0196905_10556221	3300022198	Aqueous	MPTWLVIILAVLAPGGVITALIERTRRENNRDHAKNADLLHRIDGKVDKIDSRLDSHIDWHAHNDD
Ga0196901_12132441	3300022200	Aqueous	MPTWAAVLIAVVAPGGIIVSLLERVRRENNRDHANNSELLKRIDGKVDKIDSRLDSHIDWHAHND
Ga0255781_103531671	3300022934	Salt Marsh	MPTWAAIVLAVVAPGGVIVTLLERVRRENNRDHAKNSELLTKIDGKVDKIDSRLDSHIDWHAHND
Ga0255777_104314561	3300023175	Salt Marsh	TVLAPGGLLAILIEKTRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0255772_103688081	3300023176	Salt Marsh	TWAAVLLAVVAPGGVIVTLLERVRRENSRDHATNSQMLKQIDGKVDKIDSRLDSHIDWHAHND
Ga0255763_12620473	3300023273	Salt Marsh	MPTWAAILVAVLAPSGIVVTLIERVRRENNRDHGRNSQMLSQIDSKVDKIDTRLDSHIDWHAHKDD
Ga0208160_10378173	3300025647	Aqueous	VPTWLAIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK
Ga0208543_10205253	3300025810	Aqueous	MPTWAAVLLAVVAPGGIIVTLLERVRRENSRDHATNSEMLKQIDGKVDKIDSRLDSHIDWHAHND
Ga0208917_10627164	3300025840	Aqueous	VPTWAVIVLAVLAPGGVLTVLIERMRRENNRDHNRNSELLQQIDGKVDKIDNRLDSHMDW
Ga0208645_10997645	3300025853	Aqueous	MPTWAVILLAVVAPGGVIVTLLERVRRENNRDHAYNSNLLRRIDGKVDRIGDRLSDHLEWHLDNHETEES
Ga0208644_10716471	3300025889	Aqueous	VPTWLAIILAVLAPGGLITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK
Ga0209536_1008798322	3300027917	Marine Sediment	MPTWLVIILAVLAPGGVITVLIERTRRENNRDHARNSDLLHRIDGKVDKIDSRLDSHIDWHAHKDDK
Ga0209536_1011614713	3300027917	Marine Sediment	MPTWAVILLAVVAPGGVIVTLLERVRRENNRDHAYNSSLLRRIDGKVDRIGDRLSDHLEWHLDNHET
Ga0209536_1030600761	3300027917	Marine Sediment	MPTWLAIVLAVVAPGGVIVTMLEKVRRENTRDHAANSDLLRRIDHKVDRIDERMSDHLEWHLEQDPQK
Ga0307380_104867092	3300031539	Soil	VPTWAVIVLAVLAPGGVITVLIERMRRENNRDHGRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0307378_106845521	3300031566	Soil	PTWAVIVLAVLAPGGVITVLIERMRRENNRDHGRNSELLQQIDGKVDKIDNRLDSHMDWHAHHD
Ga0307376_103903894	3300031578	Soil	MPTWAAVLLAVVAPGGIIVTLLERVRRENSRDHATNSEMLKRIDGKVDKIDSRLDSHIDWHAHND
Ga0348335_011395_3142_3342	3300034374	Aqueous	VILLAVVAPGGVIVTLLERVRRENNRDHAYNSNLLRRIDGKVDRIGDRLSDHLEWHLDNHETEESA
Ga0348336_026711_2620_2817	3300034375	Aqueous	ILLAVVAPGGVIVTLLERVRRENNRDHAYNSNLLRRIDGKVDRIGDRLSDHLEWHLDNHETEESA
Ga0348336_113703_697_882	3300034375	Aqueous	AAVLLAVVAPGGVIVTLLERVRRENSRDHATNSEMLKQIDGKVDKIDSRLDSHIDWHAHN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097252

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences