Metagenome / Metatranscriptome Family F097226

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097226
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	MAPCNYIPFETANIDPLSPYLDDLFDLDILCTEEGIFINLSPEE
Number of Associated Samples	74
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.65 %
% of genes near scaffold ends (potentially truncated)	22.12 %
% of genes from short scaffolds (< 2000 bps)	76.92 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (20.192 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.56% β-sheet: 19.44% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF05284	DUF736	51.92
PF01555	N6_N4_Mtase	15.38
PF08401	ArdcN	1.92
PF13604	AAA_30	1.92
PF03412	Peptidase_C39	0.96
PF04365	BrnT_toxin	0.96
PF00701	DHDPS	0.96
PF02534	T4SS-DNA_transf	0.96
PF13659	Obsolete Pfam Family	0.96
PF10282	Lactonase	0.96
PF05729	NACHT	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG5489	Uncharacterized conserved protein, DUF736 family	Function unknown [S]	51.92
COG0863	DNA modification methylase	Replication, recombination and repair [L]	15.38
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	15.38
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	15.38
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	1.92
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.96
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.77 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.92 %
Acidobacteria bacterium 13_1_40CM_2_56_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_11	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.69 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.92 %
Acidobacteria bacterium 13_1_40CM_2_56_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_11	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	5.77 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.96 %
Acidobacteria bacterium 13_1_40CM_2_56_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_11	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	5.77 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.96 %
Acidobacteria bacterium 13_1_40CM_2_56_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_11	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	5.77 %
unclassified Sinorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium	0.96 %
Acidobacteria bacterium 13_1_40CM_2_56_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_11	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	5.77 %
Sinorhizobium sp. BJ1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium → Sinorhizobium sp. BJ1	0.96 %
Acidobacteria bacterium 13_1_40CM_2_56_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_11	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10007109	All Organisms → cellular organisms → Bacteria → Proteobacteria	7739	Open in IMG/M
3300000567\|JGI12270J11330_10192621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	706	Open in IMG/M
3300001452\|JGI20203J14952_1003341	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300005542\|Ga0070732_10036275	All Organisms → cellular organisms → Bacteria	2822	Open in IMG/M
3300005591\|Ga0070761_10487866	Not Available	759	Open in IMG/M
3300006052\|Ga0075029_100001681	All Organisms → cellular organisms → Bacteria	12630	Open in IMG/M
3300006052\|Ga0075029_100137545	Not Available	1493	Open in IMG/M
3300006162\|Ga0075030_100322253	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1234	Open in IMG/M
3300006638\|Ga0075522_10430512	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300009500\|Ga0116229_11061856	Not Available	649	Open in IMG/M
3300009624\|Ga0116105_1181190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	573	Open in IMG/M
3300009637\|Ga0116118_1150496	Not Available	752	Open in IMG/M
3300009701\|Ga0116228_10276771	Not Available	1181	Open in IMG/M
3300009709\|Ga0116227_10042756	All Organisms → cellular organisms → Bacteria	4353	Open in IMG/M
3300009709\|Ga0116227_11273941	Not Available	552	Open in IMG/M
3300009787\|Ga0116226_10003483	All Organisms → cellular organisms → Bacteria → Acidobacteria	13887	Open in IMG/M
3300009787\|Ga0116226_11641403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	592	Open in IMG/M
3300010341\|Ga0074045_10367246	Not Available	937	Open in IMG/M
3300010343\|Ga0074044_10518713	Not Available	778	Open in IMG/M
3300010343\|Ga0074044_10562433	Not Available	744	Open in IMG/M
3300010379\|Ga0136449_100091959	All Organisms → cellular organisms → Bacteria	6303	Open in IMG/M
3300013314\|Ga0175859_1147197	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300014158\|Ga0181521_10158374	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300014165\|Ga0181523_10664455	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300014167\|Ga0181528_10516990	Not Available	657	Open in IMG/M
3300014199\|Ga0181535_10001476	All Organisms → cellular organisms → Bacteria → Acidobacteria	30679	Open in IMG/M
3300014491\|Ga0182014_10170163	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300014492\|Ga0182013_10120360	Not Available	1720	Open in IMG/M
3300014492\|Ga0182013_10157589	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300014492\|Ga0182013_10413169	Not Available	721	Open in IMG/M
3300014495\|Ga0182015_10413430	Not Available	869	Open in IMG/M
3300014499\|Ga0182012_10003718	All Organisms → cellular organisms → Bacteria	16141	Open in IMG/M
3300014499\|Ga0182012_10033182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4376	Open in IMG/M
3300014501\|Ga0182024_10904066	Not Available	1063	Open in IMG/M
3300014501\|Ga0182024_11653854	Not Available	723	Open in IMG/M
3300014501\|Ga0182024_11928999	Not Available	656	Open in IMG/M
3300014638\|Ga0181536_10468520	Not Available	552	Open in IMG/M
3300014654\|Ga0181525_10842585	Not Available	519	Open in IMG/M
3300014838\|Ga0182030_10323149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1677	Open in IMG/M
3300017996\|Ga0187891_1034641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_11	2235	Open in IMG/M
3300018034\|Ga0187863_10097721	Not Available	1647	Open in IMG/M
3300018038\|Ga0187855_10575415	Not Available	656	Open in IMG/M
3300018042\|Ga0187871_10247900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	989	Open in IMG/M
3300018043\|Ga0187887_10617270	Not Available	640	Open in IMG/M
3300018043\|Ga0187887_10776568	Not Available	566	Open in IMG/M
3300021181\|Ga0210388_10000760	All Organisms → cellular organisms → Bacteria	25758	Open in IMG/M
3300021181\|Ga0210388_10699765	Not Available	883	Open in IMG/M
3300021404\|Ga0210389_11227727	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300021474\|Ga0210390_10578142	Not Available	943	Open in IMG/M
3300023101\|Ga0224557_1154720	Not Available	844	Open in IMG/M
3300025627\|Ga0208220_1016183	All Organisms → cellular organisms → Bacteria	2439	Open in IMG/M
3300025633\|Ga0208480_1073642	Not Available	843	Open in IMG/M
3300025862\|Ga0209483_1296451	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300027625\|Ga0208044_1005243	All Organisms → cellular organisms → Bacteria	5525	Open in IMG/M
3300027842\|Ga0209580_10195691	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300027898\|Ga0209067_10126144	Not Available	1346	Open in IMG/M
3300028562\|Ga0302151_10265551	Not Available	573	Open in IMG/M
3300028866\|Ga0302278_10136690	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300028873\|Ga0302197_10219949	Not Available	879	Open in IMG/M
3300028906\|Ga0308309_11874028	Not Available	506	Open in IMG/M
3300029883\|Ga0311327_10296626	Not Available	1053	Open in IMG/M
3300029910\|Ga0311369_10902146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	706	Open in IMG/M
3300029910\|Ga0311369_11035242	Not Available	646	Open in IMG/M
3300029917\|Ga0311326_10581581	Not Available	540	Open in IMG/M
3300029939\|Ga0311328_10996547	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	546	Open in IMG/M
3300029951\|Ga0311371_12054700	Not Available	604	Open in IMG/M
3300029952\|Ga0311346_11196106	Not Available	593	Open in IMG/M
3300029954\|Ga0311331_11135231	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300029999\|Ga0311339_10992787	Not Available	788	Open in IMG/M
3300030007\|Ga0311338_12068704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	504	Open in IMG/M
3300030020\|Ga0311344_10791208	Not Available	773	Open in IMG/M
3300030051\|Ga0302195_10396493	Not Available	598	Open in IMG/M
3300030503\|Ga0311370_12327248	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300030506\|Ga0302194_10349076	Not Available	581	Open in IMG/M
3300030618\|Ga0311354_11852819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	523	Open in IMG/M
3300030618\|Ga0311354_11990768	Not Available	500	Open in IMG/M
3300030760\|Ga0265762_1150330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	554	Open in IMG/M
3300031234\|Ga0302325_10158451	All Organisms → cellular organisms → Bacteria	4023	Open in IMG/M
3300031234\|Ga0302325_10228111	All Organisms → cellular organisms → Bacteria	3147	Open in IMG/M
3300031234\|Ga0302325_11434217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300031234\|Ga0302325_11487608	Not Available	873	Open in IMG/M
3300031234\|Ga0302325_12860017	Not Available	563	Open in IMG/M
3300031236\|Ga0302324_100263921	All Organisms → cellular organisms → Bacteria → Proteobacteria	2674	Open in IMG/M
3300031236\|Ga0302324_100318844	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300031236\|Ga0302324_100389224	All Organisms → cellular organisms → Bacteria → Proteobacteria	2086	Open in IMG/M
3300031236\|Ga0302324_100505591	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300031236\|Ga0302324_101788484	Not Available	782	Open in IMG/M
3300031236\|Ga0302324_102913758	Not Available	572	Open in IMG/M
3300031236\|Ga0302324_103297719	Not Available	529	Open in IMG/M
3300031525\|Ga0302326_12542488	Not Available	641	Open in IMG/M
3300031708\|Ga0310686_106566715	All Organisms → cellular organisms → Bacteria → Proteobacteria	9140	Open in IMG/M
3300031788\|Ga0302319_10506908	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300031788\|Ga0302319_11053090	Not Available	769	Open in IMG/M
3300031788\|Ga0302319_11150371	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300032160\|Ga0311301_10018525	All Organisms → cellular organisms → Bacteria	20071	Open in IMG/M
3300032160\|Ga0311301_12548059	Not Available	570	Open in IMG/M
3300032805\|Ga0335078_10285317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium → Sinorhizobium sp. BJ1	2229	Open in IMG/M
3300032805\|Ga0335078_11142010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	906	Open in IMG/M
3300032892\|Ga0335081_10803759	Not Available	1123	Open in IMG/M
3300032895\|Ga0335074_10003321	All Organisms → cellular organisms → Bacteria → Acidobacteria	21925	Open in IMG/M
3300032895\|Ga0335074_10075822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4519	Open in IMG/M
3300032895\|Ga0335074_10188958	All Organisms → cellular organisms → Bacteria → Proteobacteria	2534	Open in IMG/M
3300033818\|Ga0334804_033967	Not Available	1606	Open in IMG/M
3300034199\|Ga0370514_049926	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.27%
Host-Associated	Host-Associated	6.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.96%
Aquatic	Environmental → Aquatic	17.31%
Plants	Host-Associated → Plants	6.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.38%
Peat	Environmental → Terrestrial → Peat	35.58%
Freshwater	Environmental → Aquatic → Freshwater	13.46%
Peat Moss	Host-Associated → Plants → Peat Moss	5.77%
Sediment	Environmental → Aquatic → Sediment	3.85%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	35.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.46%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.85%
Loam	Environmental → Terrestrial → Soil → Loam	1.92%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	35.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.62%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	5.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	20.19%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	13.46%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.77%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	5.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Moss Associated	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Moss Associated	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300013314	Moss microbial communities from three moss species from boreal forest in Fairbanks, Alaska, USA Reanalysis	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100071094	3300000567	Peatlands Soil	MSPCNYIPFETATLDPESPYFDDLLDLDVLITEEGILINVPDEQ*
JGI12270J11330_101926212	3300000567	Peatlands Soil	MAPCNYIPFETANIDPLSPYLDDLFDLDILCTEEGIFINLSPEE*
JGI20203J14952_10033413	3300001452	Arctic Peat Soil	MTLCNYIPFETPTIDPMYPYLDDLFDLDVLCTEEGIFINVISE*
Ga0070732_100362752	3300005542	Surface Soil	MKRCNYIPLETATLDHSFLDDLLDLDVLCTEEGIFINIPERA*
Ga0070761_104878661	3300005591	Soil	QRNPTMKSCNYIPLQTAHLDTSHPLFDDLLDLDVLCTEEGIFINVPHKE*
Ga0075029_10000168110	3300006052	Watersheds	MTPCNYVLIETSHIDPQSPYLEDLFDLDILCTEEGIFINLPKATEGADV*
Ga0075029_1001375452	3300006052	Watersheds	MPPCNYIPLETNPSELPALYLDELFDLDVLCTEEGIFINSPVD*
Ga0075030_1003222534	3300006162	Watersheds	MAPCNYIPLETSTLDPSSPHFDDTFDLDILCTEEGIFINVPLT*
Ga0075522_104305122	3300006638	Arctic Peat Soil	MTHCNYIALDTADLDPLHPYLDELFDLDLLCTEEGIFINVPSEE*
Ga0116229_110618562	3300009500	Host-Associated	METHMAPCNYIPLDNDLPSLYLDELFDLDVLSTEEGIFINTQAE*
Ga0116105_11811902	3300009624	Peatland	MAPCNYILRDTARIDPLILYLDDLFDLDILCTEEGILINVSPEE*
Ga0116118_11504962	3300009637	Peatland	MNPCNYIPVETANIDPLSPYLDDLFDLDILCTEEGIFINASPEE*
Ga0116228_102767712	3300009701	Host-Associated	MNPCHYIPFETATLDPSHPLYDDLLDLDILCTEEGIFINVPTQP*
Ga0116227_100427563	3300009709	Host-Associated	MALCNYIPLESAYLDAHPPYIDDIFDLDILCTEEGIFINTDSHEEA*
Ga0116227_112739412	3300009709	Host-Associated	MTKCNYIPLDTDFELPSLYLDELFDLDVLCTEEGIFINVPAE*
Ga0116226_1000348318	3300009787	Host-Associated	MNPCNYIPFETATLDPSHPLYDDLLDLDILCTEEGIFINVPTQP*
Ga0116226_116414032	3300009787	Host-Associated	MKPCHHIPFETATLDPMTYDDLLDLDVLLTDEGIFINTANPQ*
Ga0074045_103672461	3300010341	Bog Forest Soil	NYIPLDTARIDPLTLYLDDLFDLDILCTEEGIFINVSPEE*
Ga0074044_105187132	3300010343	Bog Forest Soil	MAPCNYIPLDTARIDPLTLYLDDLFDLDILSTEEGIFINVSPEE*
Ga0074044_105624331	3300010343	Bog Forest Soil	MTTCNYVPIETSHIDPLSPYLEDLFDLDILCTEEGIFINLPKATDGSSV*
Ga0136449_1000919595	3300010379	Peatlands Soil	MPPCNYIALDTSHIDPLSLYLDELFDLDILCTEEGIFINVPNQQQQGSRS*
Ga0175859_11471972	3300013314	Moss Associated	MTKCNYIQLDTNAFEPESLYLEELFDLDVLCTEEGIFINIPSE*
Ga0181521_101583742	3300014158	Bog	MTPCNYVPYDTSHIDPLSPYLEDLFDLDILCTEEGIFINLPRATEEADV*
Ga0181523_106644552	3300014165	Bog	MPLDTADLDPLSPYLDDLFDFDILCTEEGIFINTSPEE*
Ga0181528_105169902	3300014167	Bog	MAHCNYIALDTAHIDPLSPYLDELFDLDILCTEEGIFINLSSEE*
Ga0181535_1000147625	3300014199	Bog	MAPCNYIPLETKHSELPSLYLDELFDLDVICTEEGIFINSSTE*
Ga0182014_101701632	3300014491	Bog	MTPCNYIPFETANLDPLHPLFDDLFDLDILCTEEGIFINIPDQQ*
Ga0182013_101203603	3300014492	Bog	MTPCNYVLIETSHIDPLSPYLEDLFDLDILCTEEGIFINLPRATEEASV*
Ga0182013_101575893	3300014492	Bog	MTPCNYIPFEIANLDPLHPLFDDLFDLDILCTEEGIFINIPDQQ*
Ga0182013_104131691	3300014492	Bog	TSHIDPLSPYLEDLFDLDILCTEEGIFINLPKETEEASV*
Ga0182015_104134301	3300014495	Palsa	MAPCNYIPLHSDPSELPSLYLDELFDLDMICTEEGIFINSLVD*
Ga0182012_1000371824	3300014499	Bog	MAPCNYLPLDAHYLDDSFPYFDDLLDLDVLCTEEGIFINVPTEQ*
Ga0182012_100331824	3300014499	Bog	MTQCNYVPFQLSLDEPHHPYLDELFDLDILCTEEGIFINPPERE*
Ga0182024_109040662	3300014501	Permafrost	MSPCNYIPFEADIDCSSPYFDDLLDLDVLCTEEGIFINVPTEE*
Ga0182024_116538542	3300014501	Permafrost	MTKCNYIPLENASDLPSLYLDELFDLDVLCTEEGILINSPIELI*
Ga0182024_119289991	3300014501	Permafrost	KEIPMATCNYIPLQTDHSELPSLYLDELFDLDVLCTEEGIFINSPVD*
Ga0181536_104685201	3300014638	Bog	LFLKSPSRNTSMTPCNYVPYDTSHIDPLSPYLEDLFDLDILCTEEGIFINLPRATEEADV
Ga0181525_108425852	3300014654	Bog	MTRCNYVPFQTDFTDPLSPEFDEFFDLDILCADEGIFINIP
Ga0182030_103231492	3300014838	Bog	MTPCNYVPYDTSHIDPLSPYLEDLFDLDILCTEEGIFINLPKETEEASV*
Ga0187891_10346412	3300017996	Peatland	MNPCNYIPVETANIDPLSPYLDDLFDLDILCTEEGIFINASPEE
Ga0187863_100977212	3300018034	Peatland	MEPCNYIPLDIAHIDSLSLYLDDLFDLDILCTEEGIFINVSPEE
Ga0187855_105754152	3300018038	Peatland	MAPCNYIPLDTSHIDPLSLYLDDLFDLDILCTEEGIFINVFPEE
Ga0187871_102479002	3300018042	Peatland	MAPCNYVPLDTAHIDHLSLYLDDLFDLDILCTEEGVFINVSPEEYRHD
Ga0187887_106172702	3300018043	Peatland	MTTCNYVPIETSHIDPLSPYLEDLFDLDILCTEEGIFINLPNAKEGAI
Ga0187887_107765683	3300018043	Peatland	FSRNKPMAPCNYVPLDTTRFDPLSLYLDDLFDLDILCTEEGIFINVSPEEYRHD
Ga0210388_1000076011	3300021181	Soil	MAPCNYIPLDDAEFPSLYLDELFDLDVPCTEEGILINAPAE
Ga0210388_106997652	3300021181	Soil	MTRCNYIALDTANIDPLSPFFDDLFDLDILCTEEGIFINVAPQE
Ga0210389_112277272	3300021404	Soil	MAPCNYVPLEFNGSDAPALYLDELFDLDVLCTEEGILINTPTE
Ga0210390_105781422	3300021474	Soil	MTPCNYIPFETANIDPMDPLFDDLFDLDILCTEEGIFINLPHQQ
Ga0224557_11547202	3300023101	Soil	MTPCNYVPYDTSHIDPLSPYLEDLFDLDILCTEEGIFINLPKATEEASV
Ga0208220_10161833	3300025627	Arctic Peat Soil	MTLCNYIPFETPTIDPMYPYLDDLFDLDVLCTEEGIFINVISE
Ga0208480_10736422	3300025633	Arctic Peat Soil	MTLCNYIPFETATIDPLDPYLDDLFDLDILCTEEGIFINVPDSNNKE
Ga0209483_12964512	3300025862	Arctic Peat Soil	MTHCNYIALDTADLDPLHPYLDELFDLDLLCTEEGIFINVPSEE
Ga0208044_10052432	3300027625	Peatlands Soil	MSPCNYIPFETATLDPESPYFDDLLDLDVLITEEGILINVPDEQ
Ga0209580_101956912	3300027842	Surface Soil	MKRCNYIPLETATLDHSFLDDLLDLDVLCTEEGIFINIPERA
Ga0209067_101261442	3300027898	Watersheds	MTPCNYVLIETSHIDPQSPYLEDLFDLDILCTEEGIFINLPKATEGADV
Ga0302151_102655512	3300028562	Bog	FHWKESAMTRCNYIALDTADLDPLHPYLDELFDLDLLCTEEGIFINVPGEE
Ga0302278_101366903	3300028866	Bog	PCNYIPFETANLDPLHPLFDDLFDLDILCTEEGIFINIPDQQ
Ga0302197_102199491	3300028873	Bog	MTRCNYIALDTADLDPLHPYLDELFDLDLLCTEEGIFINVPGEE
Ga0308309_118740282	3300028906	Soil	MAPCNYIPLDTARIDPLSLYLDDLFDLDILCTEEGIFINVSPEEYQS
Ga0311327_102966261	3300029883	Bog	MTPCNYIPFEIANLDPLHPLFDDLFDLDILCTEEGIFINIPDQQ
Ga0311369_109021462	3300029910	Palsa	MAPTNYIPLELADRDSQHLYLDELLDLDVLCTEEGIFINVTEQ
Ga0311369_110352422	3300029910	Palsa	MTRCNYVPFLSDLPDLPRHDFDELFDLDLLCTEEGIFINVPEE
Ga0311326_105815811	3300029917	Bog	LDTADLDPLHPYLDELFDLDLLCTEEGIFINVPGEE
Ga0311328_109965472	3300029939	Bog	IPFEIANLDPLHPLFDDLFDLDILCTEEGIFINIPDQQ
Ga0311371_120547001	3300029951	Palsa	CNYIPFETATLDPESPYLDDLFDLDILCTEEGIFINVLSQQ
Ga0311346_111961062	3300029952	Bog	AMTRCNYIALDTADLDPLHPYLDELFDLDLLCTEEGIFINVPGEE
Ga0311331_111352312	3300029954	Bog	MAPCNYIPFETATIDALTSNPDDLFDLDLLCTEEGIFINIASEELP
Ga0311339_109927872	3300029999	Palsa	MSPCNYIPFESAMIDPQSTYADDLFDLDILCTEEGIFINVADQEGPCS
Ga0311338_120687041	3300030007	Palsa	MAPCNYIPLEIDRSELPSLYLDELFDLDVLCTEEGIFINTPMD
Ga0311344_107912081	3300030020	Bog	MTHCNYIALNTDDLDPLHPYLDELFDLDLLCTEEGIFINVP
Ga0302195_103964931	3300030051	Bog	AMTHCNYIALNTDDLDPLHPYLDELFDLDLLCTEEGIFINVPGEE
Ga0311370_123272482	3300030503	Palsa	MNSCNYVPFLTDPIDPLGPDFDDIFDLDILCTEEGILINLPEE
Ga0302194_103490761	3300030506	Bog	LRAARLSQNPFHWKESAMTRCNYIALDTADLDPLHPYLDELFDLDLLCTEEGIFINVPGE
Ga0311354_118528192	3300030618	Palsa	MAPTNYIPLELADRDSHHLYLDELLDLDVLCTEEGIFINVTEQ
Ga0311354_119907681	3300030618	Palsa	MPKCNYIPLDLTSELPSLYLDELFDLDVLCTEEGIFINNPVD
Ga0265762_11503302	3300030760	Soil	MAPCNYIPLDTAHIEPLSLYLDDLFDLDILCTEEGIFINVSSEE
Ga0302325_101584513	3300031234	Palsa	MASCNYIPLDTAQFDAPSLYLDDLFDLDILCTEEGIFINVAQEE
Ga0302325_102281116	3300031234	Palsa	MAPCNYIPLEIDRSELPSLYLDELFDLDVLYMEEGIFINSPID
Ga0302325_114342171	3300031234	Palsa	MTRCNYVPFLTDPIDPPRHDFDELFDLDLLCTEEGIFINIPEE
Ga0302325_114876082	3300031234	Palsa	MTQCNYIPLESDLPSPYLDELFDLDVLCTEEGIFINSSGD
Ga0302325_128600172	3300031234	Palsa	MEPCNYIPLQADPSDLPSLYLDELFDLDMICTEEGIFINSLVD
Ga0302324_1002639214	3300031236	Palsa	MTQCNYVPLNIDYPVLDHDELFDLDVLCTEEGIFINTPMD
Ga0302324_1003188443	3300031236	Palsa	MSPCNYIPLETAYLDSTSLYLDDLFDLDILCTEEGILINPDYSHEE
Ga0302324_1003892243	3300031236	Palsa	MTRCNYIALDTAHLDPHSFYLDELLDLDVLCTEEGIFINASTEE
Ga0302324_1005055914	3300031236	Palsa	MSPCNYIPFESATIDPQSTYPDELFDLDILCTEEGIFINVPSHQQGGIEHDPFSY
Ga0302324_1017884842	3300031236	Palsa	MTRCNYVPFQTDLTDPLSPEFDELFDLDILCAEEGIFINLPEE
Ga0302324_1029137582	3300031236	Palsa	MNSCNYAPYLTDPIDPLGPDFDDIFDLDILCTEEGILINLPEE
Ga0302324_1032977191	3300031236	Palsa	MNLCNYIALDTSDYPYFDDLLDLDILCTEEGIFIK
Ga0302326_125424881	3300031525	Palsa	MSPCNYIPLETAYLDSTSLYLDDLFDLDILCTEEGIL
Ga0310686_1065667153	3300031708	Soil	MAPCNYVPLDTAHIDSLSLYLDDLFDLDILCTEEGIFINVSTEE
Ga0302319_105069082	3300031788	Bog	MQPCNYIPFETATLDSNNPLLDELFDLDLLLTEEGVFINLPERE
Ga0302319_110530902	3300031788	Bog	MAPCNYIPFETATIDALTSNPDDLFDLDLLCTEEGIFINIASEEL
Ga0302319_111503713	3300031788	Bog	YIPFETANLDPLHPLFDDLFDLDILCTEEGIFINIPDQQ
Ga0311301_100185259	3300032160	Peatlands Soil	MAPCNYIPFETANIDPLSPYLDDLFDLDILCTEEGIFINLSPEE
Ga0311301_125480592	3300032160	Peatlands Soil	MPPCNYIALDTSHIDPLSLYLDELFDLDILCTEEGIFINVPNQQQQGSRS
Ga0335078_102853174	3300032805	Soil	MKPCNYIPLQTAHLDTDHPFFDDLLDLDVLCTEEGIFINVPDKE
Ga0335078_111420103	3300032805	Soil	MNPCNYIPFETAIIDPSDGTFTDLFDLDILCTEEGIFINIANQQQEGVRL
Ga0335081_108037592	3300032892	Soil	QTAHLDTDHPFFDDLLDLDVLCTEEGIFINVPDKE
Ga0335074_1000332119	3300032895	Soil	MTRCNYVALDIDPMSTYLDELFDLDILCTEEGIFINVAREE
Ga0335074_100758227	3300032895	Soil	MTRCNYVALDTRHIDPTSAYLDELFDLDILCTEEGIFINVAGDE
Ga0335074_101889585	3300032895	Soil	MTACNYVPLDIPLSELPSLYLDDLFDLDILCTEEGIFINVSTEE
Ga0334804_033967_1345_1494	3300033818	Soil	MTPCNYVLIETSHIDPLSPYLEDLFDLDILCTEEGIFINLPRATEEASV
Ga0370514_049926_657_803	3300034199	Untreated Peat Soil	MTTCNYLPIETSHIDPLSPYLEDLFDLDILCTEEGIFINLPNAKEGAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097226

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences