Basic Information | |
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Family ID | F097168 |
Family Type | Metagenome |
Number of Sequences | 104 |
Average Sequence Length | 48 residues |
Representative Sequence | MAIVFKEEGHLYESIDQDKIDWTSVTSFIGMFKPKFDREGQAKKS |
Number of Associated Samples | 94 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 2.88 % |
% of genes near scaffold ends (potentially truncated) | 97.12 % |
% of genes from short scaffolds (< 2000 bps) | 81.73 % |
Associated GOLD sequencing projects | 88 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.26 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (70.192 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (24.038 % of family members) |
Environment Ontology (ENVO) | Unclassified (62.500 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (69.231 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 19.18% β-sheet: 10.96% Coil/Unstructured: 69.86% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.26 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Lake Freshwater Lentic Freshwater Freshwater, Plankton Freshwater Lake Sediment Freshwater Freshwater Freshwater Marine Deep Ocean Deep Subsurface Seawater Marine Sediment Worm Burrow Aqueous Seawater Sackhole Brine Freshwater To Marine Saline Gradient Marine Sea-Ice Brine Marine Seawater Estuarine Marine Salt Marsh Marine Marine Estuarine Water Pelagic Marine Pelagic Marine Marine Seawater Sediment Pond Water Sediment Macroalgal Surface |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOWin2010_101751671 | 3300000117 | Marine | MPVIFKEDGHIYQSLDENLDKDNINWTSVTSFIAKFKPKFDKKAVAKKSCKNKRS |
TDF_OR_ARG05_123mDRAFT_11151981 | 3300000242 | Marine | MAISFKEEGHSYESNDQDKINWTSVTAFIGMFKPKFDRDG |
BBAY88_10317831 | 3300001183 | Macroalgal Surface | MAIIFKEEGHVYESTDQDKINWTSVTSFIGMFKPKFNAKAQAKKSAKNKRSKWYGM |
JGI26081J50195_11010471 | 3300003346 | Marine | MAVIFKEEGHIYESNDQEKIDWTSVTSFIGKFKPKFDAKGQAKKSANNKRSKWY |
Ga0055584_1013438653 | 3300004097 | Pelagic Marine | MAITFKEEGHTYESNDQDQIDWISVTSVISKFKEPFDQKAIAKKSSKNK |
Ga0065861_10126501 | 3300004448 | Marine | MAISFKEEGHLYESNDKDKINWTSVTSFIGMFKPKFDREGQAKK |
Ga0066223_11134301 | 3300004461 | Marine | MAITFKEEGHLYESNDKDKINWTSVTSFIGMFKPKFDREGQAKKSSKNKRS |
Ga0066223_12449163 | 3300004461 | Marine | MAISFKEEGHLYESIDDANITWLSVTSFIGKFKPKFDRDGQAIKSSKNKRS |
Ga0070728_101959925 | 3300005588 | Marine Sediment | MAILFKEEGHVYESIDQDKIDWLSVTSLVGKFKPKFDRDGQAVKSSKNKRSKW |
Ga0070722_100160556 | 3300005601 | Marine Sediment | MAILFKEEGHVYESIDQDKIDWLSVTSLVGKFKPKFDRDGQAVKSSK |
Ga0070725_102473144 | 3300005920 | Marine Sediment | MAILFKEEGHVYESIDQDKIDWLSVTSLVGKFKPK |
Ga0098073_10023571 | 3300006734 | Marine | MAIVFKEEGHVYESVDQDKINWTSVTSFVGMFKPKFDAKAQAKKSAKNKRSKWY |
Ga0098073_10571261 | 3300006734 | Marine | MSLRFKEEGHIYESDDGIKWTGVTSFVGMFKKKFDPKTGSEKS |
Ga0098038_12639151 | 3300006735 | Marine | MAIIFKEDGHLYESIDQDNITWLSVTSLVGKFKPKFDREGQAKKSSKNKRSKW |
Ga0098048_11963413 | 3300006752 | Marine | MAITFKEDGHLYESIGNEDIKWTSVTSFIGNFKPKFDREGQAKKSSKNKRS |
Ga0098074_11644411 | 3300006790 | Marine | VVYYYNTVTMALKFIEEGHVYESTDQDNIKWTGVTSFIGKFKPKF |
Ga0098055_13390732 | 3300006793 | Marine | MAIVFKEEGHVYESTDQDKINWTSVTGFISMFKPKFDAKGQAKK |
Ga0070750_101492301 | 3300006916 | Aqueous | MGIQFKEEGHIYESIDNAGIEWTSVTSFVGMFKPKFDAKAQAKKSAKNKR |
Ga0099849_11347294 | 3300007539 | Aqueous | MALQFKEDGHIYESVDNDKIDWVSVTSLIAMFKPKFNAKEQAVKSSKNKKSKWYGMTPKEIL |
Ga0102869_11899141 | 3300007627 | Estuarine | MGLKFIEEGHVYESTTEEKVKWTSVTSLVSKFKPKFDRDGQAK |
Ga0075480_102096153 | 3300008012 | Aqueous | MALQFKEDGHIYESVDNDKIDWVSVTSLIAMFKPKFNAKEQAVKSSKNKKSKWYGMTP |
Ga0114346_13331401 | 3300008113 | Freshwater, Plankton | MSIYFKEDGHLYKSLGDENIDWLSVTSFIGMFKPKFDSKDAALKAS |
Ga0115371_103060913 | 3300008470 | Sediment | MAIQFKEEGHVYESIDEDKIPWVSVTSLVGKFKPKFDIDGQAIKSSKNKRSK* |
Ga0115371_105983431 | 3300008470 | Sediment | MAISFKEEGHLYESNDEDRINWTSVTSFIGMFKPK |
Ga0114918_100254221 | 3300009149 | Deep Subsurface | MAIIFKEEGHIYESIDHDNIDWISVTSFIGKFKPK |
Ga0114994_103228405 | 3300009420 | Marine | MAILFKEEGHVYESTDNDKISWVSVTGLVGKFKPKFD |
Ga0114994_108825581 | 3300009420 | Marine | MAISFKEEGHLYESIDDDKITWLSVTSFIGKFKPKFDRDGQAIKSSKNK |
Ga0114997_102710321 | 3300009425 | Marine | MVTGLLHYLTDMAIVFKEEGHVYESNDKDKIDWTSVTAFIGMFKPKFDREGQAKKSSKNKRSKW |
Ga0114915_11985622 | 3300009428 | Deep Ocean | VGTGIHQQHKVMAISFKEEGHLYESNDEDRINWTSVTAFIGMFKPKFDRDGQAKKSS |
Ga0115005_103990155 | 3300009432 | Marine | MAITFKEEGHLYESNDKDKINWTSVTSFIGMFKPKFDREGQAKKSSKNKRSKWH |
Ga0115005_105797741 | 3300009432 | Marine | MAISFKEEGHLYESIDDANITWLSVTSFIGKFKPKFDRD |
Ga0115559_11353324 | 3300009438 | Pelagic Marine | MAILFKEEGHVYESIDQDKIDWLSVTSLVGKFKPKFD |
Ga0115563_13452872 | 3300009442 | Pelagic Marine | MGLRFIEEGHVYESTNDEKINWLSVTSFISKFKPKFDRDGQAKKSSKNKRSKW |
Ga0115572_1002054714 | 3300009507 | Pelagic Marine | MALRFIEEGHVYESTNDEKINWLSVTSFISKFKPKFDRDGQAK |
Ga0114999_107657901 | 3300009786 | Marine | MAIIFKEEGHIYESNDQDKINWTSVTSFIGMFKPKFD |
Ga0098059_11616583 | 3300010153 | Marine | MAIVFKEEGHVYESTDQDKINWTSVTGFISMFKPKFDAKGQAKKSSKNK |
Ga0129324_101403394 | 3300010368 | Freshwater To Marine Saline Gradient | MAVIFKEEGHVYESNDADQINWTSVTSFIGMFKPKFDAKSQAKKSAK |
Ga0118733_1064890493 | 3300010430 | Marine Sediment | MAIIFKEEGHSYESIDNDSIDWLSVTSFIGKFKPKFD |
Ga0133547_1016721014 | 3300010883 | Marine | MAVIFKEEGHVYESNDKDKINWTSVTSFIGMFKPKFDRNG |
Ga0181412_10150026 | 3300017714 | Seawater | MAISFKEDGHLYESIDNDNINWLSVTSFIGKFKPKFDRDGQ |
Ga0181390_11104933 | 3300017719 | Seawater | MAVIFKEDGHIYESLDEDLKKDQIKWTSVTSFISKFKPKFDAKAISEKSCKNKRSKWFG |
Ga0181401_11733142 | 3300017727 | Seawater | MGLKFIEEGHVYESTNEEKINWLSVTSFIAKFKPKFDRDGQAKKSSKNKRSK |
Ga0181419_11347422 | 3300017728 | Seawater | MKKIKQKEMPVIFKEDGHIYQSLDEHLEKDQIKWTSVTSFIGMFKPKFNAEKQAKKSSKNKRSKWYGMK |
Ga0181402_10205101 | 3300017743 | Seawater | MAISFKEDGHLYESIDNDNINWLSVTSFIGKFKPKFDRDGQAIKSSKNKRSKW |
Ga0187219_11324221 | 3300017751 | Seawater | MAITFKEDGHLYQSIEDEGINWTSVTSFISNFKPKFDREGQAKKSAKNKRSK |
Ga0181422_10289171 | 3300017762 | Seawater | MAISFKEDGHLYESIDQDKISWTSVTSLVSKFKPK |
Ga0187217_11570493 | 3300017770 | Seawater | MGLKFIEEGHVYESTNEEKINWLSVTSFIAKFKPKFDRD |
Ga0181380_11908342 | 3300017782 | Seawater | MPVIFKEDGHIYQSLDEHLEKDQIKWTSVTSFIGMFKPKFNAEKQAKKSSKNKR |
Ga0181424_101583474 | 3300017786 | Seawater | MAIIFKEEGHTYESNDHDSIDWTSVTSLVSMFKEPFDGETQAKK |
Ga0181607_106951941 | 3300017950 | Salt Marsh | MAVIFKEEGHVYESKDEEKVDWTSVTSFISLFKPKFDAKAQAKKSAKNKRSKW |
Ga0181576_107204461 | 3300017985 | Salt Marsh | MGLAFKEEGHVYESTDEEKIKWTSVTSFISMFKPKFDAKAQ |
Ga0194024_11289763 | 3300019765 | Freshwater | MAVIFKEEGHVYESKDEEQIDWTSVTSFISMFKPKFDAKAQAKKSA |
Ga0181361_1079043 | 3300019783 | Freshwater Lake | MAIIFKEDGHTYESIEDDNIKWLSVTSFIGMLKPKFDKEGQAKKSAKNKHSKWYGPPDRKSTR |
Ga0207193_103500414 | 3300020048 | Freshwater Lake Sediment | MAIIFKEEGHIYESIDQDKINWTSVTSFIGMFKPKFDKDTQAKKSSKNKNSKWYNMTPKEILTA |
Ga0211504_10839391 | 3300020347 | Marine | MGLKFIEEGHVYESTTEEKIKWTSVTSLVGKFKPKFDRDGQA |
Ga0211686_104687791 | 3300020382 | Marine | MAIRFKEEGHIYESNDQDNISWTGVTSFIGKFKPKFDRDGQAKKSSKNKRSKWHGMT |
Ga0206683_102301151 | 3300021087 | Seawater | MGLKFIEEGHVYESTNEEKINWLSVTSFIAKFKPKFDRDGQAKK |
Ga0206682_100393296 | 3300021185 | Seawater | MGLKFIEEGHVYESTNDENINWLSVTSFIAKFKPKFDRDGQAKKSSKNKRI |
Ga0222715_105742542 | 3300021960 | Estuarine Water | MAITFKEEGHIYESNDQDKINWTSVTSFIGMFKPKFD |
Ga0222715_105870331 | 3300021960 | Estuarine Water | MAVIFKEEGHVYESSDQEKIEWTSVTSFIGKFKPKFDAKAQA |
Ga0196893_10282543 | 3300022159 | Aqueous | MSLIFKEEGHLYESIEEDIKWTSVTSFIGMFKPKFDAKAQAKKSAKNKKSKWYGMTEKEILTG |
Ga0196887_11108561 | 3300022178 | Aqueous | MAILFKEEGHVYESIDQDKIDWLSVTSLVGKFKPKFDRDGQAVKSSKNKRSK |
(restricted) Ga0233409_100177541 | 3300022938 | Seawater | MAISFKEDGHLYESIDQDKISWTSVTSLVSKFKPKFDRDGQAKKSSKN |
(restricted) Ga0233412_100646165 | 3300023210 | Seawater | MAVTFKEEGHLYESIDDDIKWTSVTSFIGKFKPKFDSET |
Ga0233399_11249461 | 3300024231 | Seawater | MAIIFKEEGHSYESIDNDSINWLSVTSFIGKFKPKFDREGQAKKSSKNKRSKW |
Ga0228610_10712741 | 3300024281 | Seawater | MALRFIEEGHVYESTNDEKIKWLSVTSFIAKFKPKFDR |
Ga0228672_10242981 | 3300024335 | Seawater | MALRFIEEGHVYESTNDEKIKWLSVTSFIAKFKPKFDRD |
Ga0255142_10209711 | 3300024352 | Freshwater | MSIYFKEDGHLYKSLGDENIDWLSVTSFISMFKPKFDSKDA |
(restricted) Ga0255049_101380452 | 3300024517 | Seawater | MAISFKEDGHLYESIDQDKISWTSVTSLVSKFKPKFDRDGQAKK |
(restricted) Ga0255049_102601461 | 3300024517 | Seawater | MAIIFKEEGHSYESIDKDTIEWLSVTSFIGMFKPKFDAKSQAKKSAK |
(restricted) Ga0255046_100222476 | 3300024519 | Seawater | MAIIFKEDGHLYESIDQDNIDWLSVTSFISKFKPKFDRDGQAIKSS |
(restricted) Ga0255046_100747245 | 3300024519 | Seawater | MGLKFIEEGHVYESTNDENINWLSVTSFIAKFKPKFDREGQAKKSSKNKKSKWYGMTS |
Ga0208670_1143374 | 3300025038 | Marine | MPVIFKSDGHVYETLDENLDKDNIKWTSVTSFVGMFKPKFDAEAQSKKSSKNK |
Ga0208018_1028791 | 3300025057 | Marine | MAIVFKEEGHVYESVDQDKINWTSVTSFVGMFKPKFDAKAQAKK |
Ga0208018_1309242 | 3300025057 | Marine | MAIVFKEEGHVYESIDQDNINWISVTSLVGKFKPKFD |
Ga0207890_10441571 | 3300025079 | Marine | MAISFKEEGHLYESIDDANITWLSVTSFIGKFKPKFDRDGQAIKSSKNKRSK |
Ga0208794_10148316 | 3300025093 | Marine | MSLRFKEEGHIYESDDGIKWTGVTSFVGMFKKKFD |
Ga0208159_10106277 | 3300025101 | Marine | MPVIFREKGHIYESLDEHLEKDQIKWTSVTSFVGLFKPKFDRDGQAKKSSKNKRSKWYGM |
Ga0209634_10312099 | 3300025138 | Marine | MAIVFKEEGHIYESTDKDKINWTSVTGFIGMFKPKFDAKAQAKKS |
Ga0209756_12979412 | 3300025141 | Marine | MTVIFKEDGHIYESLNDDLTNDNTRWTSVTSFVGLFKPKFDAEGQAKKSSKNKRSKWY |
Ga0209405_100338724 | 3300025620 | Pelagic Marine | MAILFKEEGHVYESIDQDKIDWLSVTSLVGKFKPKFDR |
Ga0209771_11286561 | 3300025701 | Marine | MAIVFKEEGHLYESVDQDKIDWTSVTSFIGMFKPKFDREGQAKKSSKNKKSKWYGMTPKEIL |
Ga0209193_11201514 | 3300025816 | Pelagic Marine | MAILFKEEGHIYESTDNDKISWVSVTGLVSKFKPKFDRD |
Ga0209193_11552003 | 3300025816 | Pelagic Marine | MAIVFKEEGHLYESIDQDKIDWTSVTSFIGMFKPKFDREGQAKKS |
Ga0209555_100301587 | 3300025879 | Marine | MAIVFKEEGHLYESVDQDKIDWTSVTSFIGMFKPKFDREGQAKKSS |
Ga0209534_100742066 | 3300025880 | Pelagic Marine | MAILFKEEGHVYESIDQDKIDWLSVTSLVGKFKPKFDRDGQAVQS |
Ga0209632_100144671 | 3300025886 | Pelagic Marine | MAITFKEEGHIYESNDQDKINWTSVTSFIGMFKPKFDREGQAKKSSKNKRSKWHGM |
Ga0209929_10968211 | 3300026187 | Pond Water | MALQFKEEGHLYESTDSDSIKWISVTSLIGMLKPKFNAEEQAKKSSKNKR |
Ga0208975_11344703 | 3300027659 | Freshwater Lentic | MAIIFKEDGHTYESIEEDNIEWLSVTSLVGKFKPKFDKEGQAKKSAKNKNSKWYGMTV |
Ga0209379_100515091 | 3300027758 | Marine Sediment | MAISFKEDGHLYESIDQDKISWTSVTSLVSKFKPKFDRDGQAKKSSK |
Ga0209502_103863331 | 3300027780 | Marine | MAVIFKEDGHIYESLNEDLEKDKITWTSVTTFIAMFKPKFDAKAQSKKSCKNKRSKWYGL |
Ga0209090_104612311 | 3300027813 | Marine | MAISFKEEGHLYESIDDDKITWLSVTSFIGKFKPKFDRDGQAIKSSK |
Ga0209402_105369011 | 3300027847 | Marine | MGLKFIEEGHVYESTDEEKINWLSVTSFIAKFKPKFDRDGQAKKSSKN |
(restricted) Ga0255055_101733641 | 3300027881 | Seawater | MAIIFKEEGHSYESIDKDTIEWLSVTSFIGMFKPKFDAKSQAK |
(restricted) Ga0233414_103631511 | 3300028045 | Seawater | MAIIFKEDGHLYESIDQDNIDWLSVTSFISKFKPKFDRDGQAIKSSKNKRSKW |
Ga0228617_11388291 | 3300028297 | Seawater | MGLKFIEEGHVYESTNEEKINWLSVTSFIAKFKPKFDRDGQAKKSSKN |
Ga0265303_106942413 | 3300028600 | Sediment | MAITFKEEGHIYESNDQDKINWTSVTSFIGMFKPKFDREGQAKKS |
Ga0307489_100527076 | 3300031569 | Sackhole Brine | MAISFKEEGHLYESNDKDKINWTSVTSFIGMFKPKFDREGQAKKSSK |
Ga0308001_102297251 | 3300031644 | Marine | MAITFKEEGHIYESNDQDNISWTGVTSFIGKFKPKFDRDGQAKKSSKN |
Ga0308011_101532563 | 3300031688 | Marine | MAIIFKEEGHSYESIDNDKIDWLSVTSFIGKFKPKFDREGQAKKSAKNKR |
Ga0315899_105037291 | 3300031784 | Freshwater | MAISFKEEGHIYQSTDGEDIKWLSVTSFIGMFKPKFDQLSQAKKSSKNKNSKW |
Ga0316201_103860621 | 3300032136 | Worm Burrow | MSLIFKEEGHLYESIEEDIKWTSVTSFIGMFKPKFDAKAQAKKSAKNKKSKWYG |
Ga0314858_021407_2_172 | 3300033742 | Sea-Ice Brine | MAIIFKEEGHIYESNDQDKINWTSVTSFIGMFKPKFDRDGQAKKSSKNKRSKWYGMI |
Ga0335030_0148952_3_110 | 3300034103 | Freshwater | MAISFKEDGHVYQSTDGEDIKWLSVTSFIGMFKQKF |
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