Metagenome / Metatranscriptome Family F097161

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097161
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	70 residues
Representative Sequence	VRNNITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG
Number of Associated Samples	75
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.10 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	68.27 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (46.154 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (33.654 % of family members)
Environment Ontology (ENVO)	Unclassified (71.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.308 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.80% β-sheet: 8.16% Coil/Unstructured: 52.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13481	AAA_25	5.77
PF00166	Cpn10	3.85
PF03796	DnaB_C	2.88
PF11351	GTA_holin_3TM	1.92
PF13884	Peptidase_S74	0.96
PF03237	Terminase_6N	0.96
PF02086	MethyltransfD12	0.96
PF06067	DUF932	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	3.85
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	2.88
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	2.88
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.96
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Viruses	superkingdom	All Organisms → Viruses	39.42 %
cellular organisms	root	All Organisms → cellular organisms	14.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.58 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.42 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	8.65 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.42 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	8.65 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.42 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	8.65 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.42 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	8.65 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	39.42 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	8.65 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10009987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	5072	Open in IMG/M
3300000115\|DelMOSum2011_c10045147	All Organisms → Viruses → Predicted Viral	1804	Open in IMG/M
3300000117\|DelMOWin2010_c10011921	All Organisms → Viruses → Predicted Viral	4865	Open in IMG/M
3300002488\|JGI25128J35275_1018109	All Organisms → Viruses → Predicted Viral	1763	Open in IMG/M
3300005239\|Ga0073579_1416017	Not Available	921	Open in IMG/M
3300005512\|Ga0074648_1000710	All Organisms → cellular organisms → Bacteria → Proteobacteria	39938	Open in IMG/M
3300005837\|Ga0078893_12079292	All Organisms → Viruses → Predicted Viral	3085	Open in IMG/M
3300006025\|Ga0075474_10056518	All Organisms → Viruses → Predicted Viral	1320	Open in IMG/M
3300006735\|Ga0098038_1004379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	5817	Open in IMG/M
3300006735\|Ga0098038_1161762	Not Available	741	Open in IMG/M
3300006737\|Ga0098037_1133609	Not Available	842	Open in IMG/M
3300006749\|Ga0098042_1040892	All Organisms → Viruses → Predicted Viral	1283	Open in IMG/M
3300006749\|Ga0098042_1059438	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300006752\|Ga0098048_1035311	All Organisms → Viruses → Predicted Viral	1615	Open in IMG/M
3300006752\|Ga0098048_1140799	Not Available	721	Open in IMG/M
3300006752\|Ga0098048_1184219	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	618	Open in IMG/M
3300006789\|Ga0098054_1000566	Not Available	21922	Open in IMG/M
3300006802\|Ga0070749_10201942	All Organisms → Viruses → Predicted Viral	1138	Open in IMG/M
3300006802\|Ga0070749_10354968	Not Available	814	Open in IMG/M
3300006802\|Ga0070749_10556523	Not Available	621	Open in IMG/M
3300006802\|Ga0070749_10585530	Not Available	603	Open in IMG/M
3300006810\|Ga0070754_10169972	All Organisms → Viruses → Predicted Viral	1031	Open in IMG/M
3300006810\|Ga0070754_10400972	Not Available	600	Open in IMG/M
3300006916\|Ga0070750_10060759	All Organisms → Viruses → Predicted Viral	1810	Open in IMG/M
3300006916\|Ga0070750_10212942	Not Available	851	Open in IMG/M
3300006916\|Ga0070750_10276715	Not Available	723	Open in IMG/M
3300006916\|Ga0070750_10367304	Not Available	605	Open in IMG/M
3300006919\|Ga0070746_10015998	All Organisms → Viruses → Predicted Viral	4174	Open in IMG/M
3300006919\|Ga0070746_10224982	Not Available	884	Open in IMG/M
3300006919\|Ga0070746_10245312	Not Available	838	Open in IMG/M
3300006919\|Ga0070746_10301785	Not Available	735	Open in IMG/M
3300006921\|Ga0098060_1084401	Not Available	909	Open in IMG/M
3300007344\|Ga0070745_1061870	All Organisms → Viruses → Predicted Viral	1517	Open in IMG/M
3300007344\|Ga0070745_1244991	Not Available	650	Open in IMG/M
3300007623\|Ga0102948_1108078	Not Available	856	Open in IMG/M
3300007640\|Ga0070751_1162886	Not Available	886	Open in IMG/M
3300007778\|Ga0102954_1003176	All Organisms → Viruses → Predicted Viral	4790	Open in IMG/M
3300009000\|Ga0102960_1114953	Not Available	977	Open in IMG/M
3300009071\|Ga0115566_10688566	Not Available	567	Open in IMG/M
3300009124\|Ga0118687_10090163	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
3300009423\|Ga0115548_1210796	Not Available	601	Open in IMG/M
3300009679\|Ga0115105_10350735	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
3300010148\|Ga0098043_1000166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	21497	Open in IMG/M
3300010149\|Ga0098049_1101676	Not Available	900	Open in IMG/M
3300010150\|Ga0098056_1088767	All Organisms → Viruses → Predicted Viral	1056	Open in IMG/M
3300010297\|Ga0129345_1020532	All Organisms → Viruses → Predicted Viral	2577	Open in IMG/M
3300012920\|Ga0160423_10298224	All Organisms → Viruses → Predicted Viral	1109	Open in IMG/M
3300012936\|Ga0163109_10072798	All Organisms → Viruses → Predicted Viral	2516	Open in IMG/M
3300012953\|Ga0163179_11373657	Not Available	631	Open in IMG/M
3300012954\|Ga0163111_10547478	All Organisms → Viruses → Predicted Viral	1073	Open in IMG/M
3300014030\|Ga0116816_1059134	Not Available	524	Open in IMG/M
3300017708\|Ga0181369_1003950	All Organisms → Viruses → Predicted Viral	4030	Open in IMG/M
3300017764\|Ga0181385_1022288	All Organisms → Viruses → Predicted Viral	2021	Open in IMG/M
3300017956\|Ga0181580_10047286	All Organisms → Viruses → Predicted Viral	3270	Open in IMG/M
3300017956\|Ga0181580_10074039	All Organisms → Viruses → Predicted Viral	2532	Open in IMG/M
3300017956\|Ga0181580_10695026	Not Available	647	Open in IMG/M
3300017962\|Ga0181581_10188018	All Organisms → Viruses → Predicted Viral	1373	Open in IMG/M
3300018421\|Ga0181592_10753010	Not Available	646	Open in IMG/M
3300018424\|Ga0181591_11052440	Not Available	550	Open in IMG/M
3300020310\|Ga0211515_1017861	Not Available	1479	Open in IMG/M
3300020379\|Ga0211652_10047621	Not Available	1285	Open in IMG/M
3300020392\|Ga0211666_10044193	All Organisms → Viruses → Predicted Viral	1935	Open in IMG/M
3300020411\|Ga0211587_10045217	All Organisms → Viruses → Predicted Viral	2032	Open in IMG/M
3300020421\|Ga0211653_10484489	Not Available	527	Open in IMG/M
3300020455\|Ga0211664_10000210	Not Available	54707	Open in IMG/M
3300020471\|Ga0211614_10005916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	5133	Open in IMG/M
3300020471\|Ga0211614_10201403	Not Available	862	Open in IMG/M
3300020472\|Ga0211579_10000183	Not Available	51782	Open in IMG/M
3300021364\|Ga0213859_10084199	All Organisms → Viruses → Predicted Viral	1509	Open in IMG/M
3300021364\|Ga0213859_10349727	Not Available	661	Open in IMG/M
3300021368\|Ga0213860_10047945	All Organisms → Viruses → Predicted Viral	1822	Open in IMG/M
3300021957\|Ga0222717_10003272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12239	Open in IMG/M
3300021957\|Ga0222717_10498095	Not Available	656	Open in IMG/M
3300021958\|Ga0222718_10001047	All Organisms → cellular organisms → Bacteria	27834	Open in IMG/M
3300021958\|Ga0222718_10047811	All Organisms → Viruses → Predicted Viral	2739	Open in IMG/M
3300021959\|Ga0222716_10000996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	23813	Open in IMG/M
3300021959\|Ga0222716_10001130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	22498	Open in IMG/M
3300022050\|Ga0196883_1005258	All Organisms → Viruses → Predicted Viral	1503	Open in IMG/M
3300022057\|Ga0212025_1007366	All Organisms → Viruses → Predicted Viral	1545	Open in IMG/M
3300022065\|Ga0212024_1001294	All Organisms → Viruses → Predicted Viral	2520	Open in IMG/M
3300022071\|Ga0212028_1084787	Not Available	591	Open in IMG/M
3300022158\|Ga0196897_1005651	All Organisms → Viruses → Predicted Viral	1562	Open in IMG/M
3300022159\|Ga0196893_1018155	Not Available	641	Open in IMG/M
3300022168\|Ga0212027_1003838	All Organisms → Viruses → Predicted Viral	1953	Open in IMG/M
3300022183\|Ga0196891_1000352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	11194	Open in IMG/M
3300025070\|Ga0208667_1000139	All Organisms → cellular organisms → Bacteria	33432	Open in IMG/M
3300025070\|Ga0208667_1032774	Not Available	918	Open in IMG/M
3300025084\|Ga0208298_1000163	Not Available	30298	Open in IMG/M
3300025086\|Ga0208157_1149530	Not Available	515	Open in IMG/M
3300025101\|Ga0208159_1030244	All Organisms → Viruses → Predicted Viral	1235	Open in IMG/M
3300025132\|Ga0209232_1000287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32417	Open in IMG/M
3300025132\|Ga0209232_1006354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	5159	Open in IMG/M
3300025151\|Ga0209645_1127285	Not Available	802	Open in IMG/M
3300025671\|Ga0208898_1140370	Not Available	668	Open in IMG/M
3300025674\|Ga0208162_1001967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	10292	Open in IMG/M
3300025759\|Ga0208899_1017117	All Organisms → Viruses → Predicted Viral	3742	Open in IMG/M
3300025759\|Ga0208899_1034256	All Organisms → Viruses → Predicted Viral	2337	Open in IMG/M
3300025759\|Ga0208899_1169137	Not Available	727	Open in IMG/M
3300025759\|Ga0208899_1177450	Not Available	699	Open in IMG/M
3300025769\|Ga0208767_1085221	All Organisms → Viruses → Predicted Viral	1315	Open in IMG/M
3300025769\|Ga0208767_1267258	Not Available	522	Open in IMG/M
3300026138\|Ga0209951_1099178	Not Available	598	Open in IMG/M
3300032136\|Ga0316201_10647750	Not Available	901	Open in IMG/M
3300034375\|Ga0348336_061143	All Organisms → Viruses → Predicted Viral	1473	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	94.23%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.81%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	39.42%
Oceanic	Environmental → Aquatic → Marine → Oceanic	27.88%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.38%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.77%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.81%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.88%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.92%
Strait	Environmental → Aquatic → Marine → Strait	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	38.46%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	25.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.38%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.77%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.85%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.88%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.92%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.96%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	33.65%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.08%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.62%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.77%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.77%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.88%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.88%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.88%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.92%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.92%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	1.92%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.96%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.96%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.96%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.96%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.96%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.96%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.96%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300014030	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 11m_Station1_GOM_Metagenome	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020310	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX556067-ERR598950)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300022159	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v3)	Environmental	Open in IMG/M
3300022168	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300032136	Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrow	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_1000998712	3300000115	Marine	AIKIDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDISNLNHERNDHLRTKHMEFPERETDGVEL*
DelMOSum2011_100451475	3300000115	Marine	MDEYIKAIKVDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDVSNLNHERDEHLRTKHMEG*
DelMOWin2010_1001192110	3300000117	Marine	VKSRNNITLNDDGPIDASIRIDLYYSLDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERDEHLRTKHMEG*
JGI25128J35275_10181094	3300002488	Marine	MEKIDAKIEIDVYYSFDEETGYYLDADSIRSDFEQALDDVEANVSHLNHERDDHLRTKHMEFPERETDGAEL*
Ga0073579_14160173	3300005239	Marine	VKSRNNITLHDDGRIDASIRIDIYYSFDEETGYYLDTDSITEEFEERLSEIEDDISNLNYERDEHLKTKHMDGEYDGE*
Ga0074648_100071026	3300005512	Saline Water And Sediment	MEEYITGIKIDVYYGFDEEGGYYLDTDSIREEFEQKLSELEGDVQHLNHERNDHLRLKHMEG*
Ga0078893_120792924	3300005837	Marine Surface Water	VKSRNNITLNDEGKIDADIRIDIYYSFDEETGYYIDTDSITAEFEERLSEIEDDISNLNHERDDHLRTKHMEFPERETNGAEL*
Ga0075474_100565185	3300006025	Aqueous	VRNNITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG*
Ga0098038_10043792	3300006735	Marine	VRSRKNVTLNDDGPIDAGIKIDIYYSFDEEGGYYIDTDSMREEFEERLSEILDDIQNLNHERNDHLRTKHMEG*
Ga0098038_11617622	3300006735	Marine	VKSRNNITLNDDGKRDAAIKIDIYYSFDEETGYHIDTDSITAEFEERLSEIEDDISNLNHERDDHLRTKHMEFPEKETNGVEL*
Ga0098037_11336092	3300006737	Marine	VKSRNNITLNDDGKIDAAIKIDIYYSFDEETGYHIDTDSITAEFEERLSEIEDDISNLNHERDDHLRTKHMEFPEKETNGVEL*
Ga0098042_10408924	3300006749	Marine	VKSRKNVTLNDDGPIDAGIKIDIYYSFDEEGGYYIDTDSMREEFEERLSEIEDDISNLNHERDDHLRTKHMEFPEKETNGVEL*
Ga0098042_10594384	3300006749	Marine	MEKIDAKIEIDVYYSFDEETGYYLDADSIRSDFEQALDDVEANVSHLNHERDEHLRTKHMEG*
Ga0098048_10353115	3300006752	Marine	VNNKIENGFKIDASISIDVYYSFDEEGGYYIDTDSMREEFEKALDEIEGDISNLNHERQEHLRTKHMEG*
Ga0098048_11407992	3300006752	Marine	VNNEIANGKEKIDASISIDVYYSFDEEGGYYIDTDSMREEFEKALDEIEGDISNLNHERQEHLRTKHMEG*
Ga0098048_11842191	3300006752	Marine	MDKIDAKIEIDVYYSFDEETGYHLDSDNVRSDFEQALDDVEANVSHLNHERQEHLRTKHMEG*
Ga0098054_10005663	3300006789	Marine	MEKEKQIDDTISVNIYYSFDEETGYYLDTEGITDEFMSRLGEIEDDISELNHLRDEHLRLKHMEG*
Ga0070749_102019422	3300006802	Aqueous	VNNEIASGKEQIDATISIDVYYSFDEEGGYYIDTDTMREEFEKALDEIEGDISNLNHERNEHLRTKHMEG*
Ga0070749_103549683	3300006802	Aqueous	VKSRNNITLHNDGPIDASIIIDIYYSFDEETGYYLDTDSITAEFEERLSEIEDDISNINHERNDHLRLKHMEG*
Ga0070749_105565232	3300006802	Aqueous	MDEYIKAIKVDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDVSNLNHERDEHLRTKHMEG*IK
Ga0070749_105855303	3300006802	Aqueous	TNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNYERNDHLRTKHMEG*
Ga0070754_101699724	3300006810	Aqueous	VKSRNNITLHNDGPIDASIIIDIYYSFDEETGYYLDTDSITAEFEERLSEIEDDISNLNHERNDHLRLKHMEG*
Ga0070754_104009721	3300006810	Aqueous	NITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG*
Ga0070750_100607593	3300006916	Aqueous	VKSRNNITLNDDGPIDASIRIDLYYSLDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEPYREESGVELVLKKQLIKNV
Ga0070750_102129423	3300006916	Aqueous	MEEIDAKIEIHVYYSFDEETGYHLDADNIRSDFEQALDDVEANVSHLNHERNEHLRTKHMEG*
Ga0070750_102767151	3300006916	Aqueous	ITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG*
Ga0070750_103673043	3300006916	Aqueous	ITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNYERNDHLKTKHMEG*
Ga0070746_100159989	3300006919	Aqueous	VRNNITLNDDGKIDAAIKIDIYYSFDEEEGYYLDTDSITAEFEERLSEIEDDISNLNHERND
Ga0070746_102249823	3300006919	Aqueous	VKSRNNITLHNDGPIDASIIIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNYERNDHLRLKHMEG*
Ga0070746_102453123	3300006919	Aqueous	VRNNITLNDDGRIDASIRIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEPYREESGVELVLKKQLIKNV
Ga0070746_103017853	3300006919	Aqueous	VRNNITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNYERNDHLRTKHMEG*
Ga0098060_10844011	3300006921	Marine	EERGIMEKEKQIDDTISVNIYYSFDEETGYYLDTEGITDEFMSRLGEIEDDISELNHLRDEHLRLKHMEG*
Ga0070745_10618704	3300007344	Aqueous	MEEYITGIKIDVYYGFDEEGGYYLDTDSIREEFEQKLSELEGDVQNLNHERNDHLRLKHMEG*
Ga0070745_12449913	3300007344	Aqueous	VKSRNNITLNDDGRIDASIKIDIYYSFDEETGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEH
Ga0102948_11080783	3300007623	Water	VKSRKNITLNDDGRIDASIKIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLN
Ga0070751_11628864	3300007640	Aqueous	VKSRNNITLHNDGPIDASIIIDIYYSFDEETGYYLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEPYRE
Ga0102954_100317611	3300007778	Water	VKSRKNITLNDDGRIDASIKIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEG*
Ga0102960_11149531	3300009000	Pond Water	MDEYIQSIKIDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDVSNLNYERYEHLRTKHMEG*
Ga0115566_106885663	3300009071	Pelagic Marine	MDEYIKGIKIDIYYGFDEEGGYYLDTDSIKEDFEKKLSQVEDDVSNLNHERNEHLRTKHTEG*
Ga0118687_100901631	3300009124	Sediment	VNNEIANGKEQIDATISIDVYYSFDEEEGYYIDTDTMREEFEKALDEIEDDISNLNHERNEHLRTKHMEG*
Ga0115548_12107963	3300009423	Pelagic Marine	MDEYIKGIKIDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDVSNLNHERDEH
Ga0115105_103507353	3300009679	Marine	MISSEIKKTKIDDNISVDVYYSFDEETGYYLDAESITDEFMSRLGEIEDDISELNHLRDEHLRLKHMEG*
Ga0098043_100016622	3300010148	Marine	VKSRNNITLNDDGKIDAAIKVDIYYSFDEETGYHIDTDSITAEFEERLSEIEDDISNLNHERDDHLRTKHMEFPEKETNGVEL*
Ga0098049_11016762	3300010149	Marine	MKEENDNKLYAGIKVDICYGYDEEYGYNLDTDGIRADFEEALTAIEDDIQNRNHERNEHLRTKHMEG*
Ga0098056_10887674	3300010150	Marine	VNNQIENGFKIDASISIDVYYSFDEEGGYYIDTDSMREEFEKALDEIEGDISNLNHERQEHLRTKHMEG*
Ga0129345_10205323	3300010297	Freshwater To Marine Saline Gradient	VKSRNNITLHNDGPIDASIIIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNINHERNDHLRLKHMEG*
Ga0160423_102982242	3300012920	Surface Seawater	VKSRNNITLNDDGPIDASIRIDVYYSFDEETGYHLDTDSITAEFEERLSEIEDNISNLNHERDDHLRTKHMEFPERETDGAEL*
Ga0163109_100727983	3300012936	Surface Seawater	VKSRNNITLNDDGPIDASIRIDVYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERDDHLRTKHMEFPERETDGAEL*
Ga0163179_113736573	3300012953	Seawater	FDEETGYSLDYDGILEEFKQALDEVEDNISNLNHERDDHLRTKHMEFPERETDGAEL*
Ga0163111_105474782	3300012954	Surface Seawater	MEKIDAKIEIDVYYSFDEETGYYLDADSIRSDFEQALDDVEANVSHLNHERNEHLRTKHMEG*
Ga0116816_10591343	3300014030	Marine	ITLHDDGPIDASIRIDIYYSFDEETGYHLDTDSITKEFEEKLSEIEDDISNLNHERDDHLRLKHMEFPERETDGAEL*
Ga0181369_10039505	3300017708	Marine	MDKIDAKIEIDVYYSFDEETGYHLDSDNVRSDFEQALDDVEANVSHLNHERQEHLRTKHMEG
Ga0181385_10222884	3300017764	Seawater	VKSRNNITLNDDGPIDAGIKIDIYYSFDEEGGYYIDTDSMREEFEERLSEILDDIENLNHERNDHLRTKHMEFPERETDGAEL
Ga0181580_100472868	3300017956	Salt Marsh	VKSRNNITLHDDGPIDASIRIDIYYSFDEETGYYLDTDSITAEFEERLSEIEDDISNLNHERDEHLRLKHMEG
Ga0181580_100740392	3300017956	Salt Marsh	VNNEIASGKEQIDATISIDVYYSFDEEGGYYIDTDTMREEFEKALDEIEGDISNLNHERNEHLRTKHMEG
Ga0181580_106950263	3300017956	Salt Marsh	VKSRNNITLHNDGPIDASIVIDVYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEG
Ga0181581_101880181	3300017962	Salt Marsh	KSRNNITLHNDGPIDASIVIDVYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEGXXVK
Ga0181592_107530103	3300018421	Salt Marsh	VKSRNNITLHDDGPIDASIRIDIYYSFDEETGYYLDTDSITAEFEERLSEIEDDISNLNHERDEHLRLKHMEGXXA
Ga0181591_110524402	3300018424	Salt Marsh	VRNNITNETDKLDASISINIYYSFDEENGYFIDYDSIKQEFEEKLDEVLDDIQYLNHERNDHLRTKHMEG
Ga0211515_10178614	3300020310	Marine	MEKEKQIDDTINVDVYYSFDEETGYYLDRESITDEFMSRLGEIEDDISNLNHERDEHLRTKYMEG
Ga0211652_100476212	3300020379	Marine	VRSRKNVTLNDDGPIDAGIKIDIYYSFDEEGGYYIDTDSMREEFEERLSEILDDIQNLNHERNDHLRTKHMEG
Ga0211666_100441936	3300020392	Marine	VKSRNNITLNDDGRIDASIRIDVYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERDDHLRTKHMEG
Ga0211587_100452174	3300020411	Marine	MKKERQIDDTISVDVYYSFDEETGYYLDRESITDEFMSRLGEIEDDISNLNHERDDHLRTKYMEG
Ga0211653_104844892	3300020421	Marine	MEKIDAKIEIDVYYSFDEETGYYLDADSIRSDFEQALDDVEANVSHLNHERDEHLRTKHMEG
Ga0211664_1000021025	3300020455	Marine	MEKEKQIDDTISVDVYYSFDEETGYYLDREGITDEFMSRLGEIEENIDNLNHERNDHLRTKYMEG
Ga0211614_1000591611	3300020471	Marine	VKSRNNVRLSYIDKFDNDKKLDAAIKIDIYYSFDEETGYYLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEG
Ga0211614_102014033	3300020471	Marine	MEKEKQIDDTISVDVYYSFDEETGYYLDREGITDEFMSRLGEIEDDISNLNHERDDHLRTKHMEG
Ga0211579_1000018323	3300020472	Marine	MISSEIKKTKIDDNISVDVYYSFDEETGYYLDAESITDEFMSRLGEIEDDISELNHLRDEHLRLKHMEG
Ga0213859_100841994	3300021364	Seawater	MDEYVTGIKIDIYYGFDEEGGYYLDTDSIREEFEKKLSEIEDDISNLNHERNDHLRLKHMEG
Ga0213859_103497272	3300021364	Seawater	VKSRNNITLHDDGPIDASIRIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEG
Ga0213860_100479456	3300021368	Seawater	LVIDIYYSFDEETGYHLDTDSITKEFEEKLSEIEDDISNLNHERDDHLRLKHMEFPERETDGAELXEKHMKCEIV
Ga0222717_100032725	3300021957	Estuarine Water	VNNEIANGKEKIDASISIDVYYSFDEEGGYYIDTDSMREEFEKALDEIEGDISNLNHERQEHLRTKHMEG
Ga0222717_104980951	3300021957	Estuarine Water	MDEYIQSIKIDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDVSNLNYERYEHLRTKHMEGXXVK
Ga0222718_1000104737	3300021958	Estuarine Water	VKSRKNITLNDDGRIDASIKIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEG
Ga0222718_100478115	3300021958	Estuarine Water	MDEYIQSIKIDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDVSNLNYERYEHLRTKHMEG
Ga0222716_100009962	3300021959	Estuarine Water	VKSRNNITLHDDGPIDASIRIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERDEHLRTKHTEG
Ga0222716_100011302	3300021959	Estuarine Water	VNNEIANGKEQIDATISIDVYYSFDEEEGYYIDTDTMREEFEKALDEIEDDISNLNHERNEHLRTKHMEG
Ga0196883_10052583	3300022050	Aqueous	VRNNITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG
Ga0212025_10073666	3300022057	Aqueous	NDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG
Ga0212024_10012943	3300022065	Aqueous	MDEYIKAIKVDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDVSNLNHERDEHLRTKHMEGXXIK
Ga0212028_10847873	3300022071	Aqueous	VRKNITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG
Ga0196897_10056514	3300022158	Aqueous	VRNNITNNKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG
Ga0196893_10181553	3300022159	Aqueous	KKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG
Ga0212027_10038381	3300022168	Aqueous	IYYGFDEESGYYLDTDSIKEDFEKKLSELEDDISNLNHERNEHLRTKHMEGXXIK
Ga0196891_10003528	3300022183	Aqueous	MDEYIKAIKVDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEDDVSNLNHERDEHLRTKHMEG
Ga0208667_100013936	3300025070	Marine	VNNKIENGFKIDASISIDVYYSFDEEGGYYIDTDSMREEFEKALDEIEGDISNLNHERQEHLRTKHMEG
Ga0208667_10327743	3300025070	Marine	MKEENDNKLYAGIKVDICYGYDEEYGYNLDTDGIRADFEEALTAIEDDIQNRNHERNEHLRTKHMEG
Ga0208298_100016325	3300025084	Marine	MEKEKQIDDTISVNIYYSFDEETGYYLDTEGITDEFMSRLGEIEDDISELNHLRDEHLRLKHMEG
Ga0208157_11495303	3300025086	Marine	SFDEETGYHIDTDSITAEFEERLSEIEDDISNLNHERDDHLRTKHMEFPEKETNGVEL
Ga0208159_10302443	3300025101	Marine	VKSRKNVTLNDDGPIDAGIKIDIYYSFDEEGGYYIDTDSMREEFEERLSEIEDDISNLNHERDDHLRTKHMEFPEKETNGVEL
Ga0209232_100028728	3300025132	Marine	MEKIDAKIEIDVYYSFDEETGYYLDADSIRSDFEQALDDVEANVSHLNHERDDHLRTKHMEFPERETDGAEL
Ga0209232_10063543	3300025132	Marine	MEKEKQIDDTISVDVYYSFDEETGYYLDRESITDEFMSRLGEIEDDISNLNHERDDHLRTKYMEG
Ga0209645_11272851	3300025151	Marine	GPIDASIRIDVYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERDDHLRTKHME
Ga0208898_11403703	3300025671	Aqueous	MEEYITGIKIDVYYGFDEEGGYYLDTDSIREEFEQKLSELEGDVQNLNHERNDHLRLKHMEG
Ga0208162_100196715	3300025674	Aqueous	VKSRNNITLHNDGPIDASIIIDIYYSFDEETGYYLDTDSITAEFEERLSEIEDDISNLNHERNDHLRLKHMEG
Ga0208899_10171176	3300025759	Aqueous	MDEYIKAIKVDIYYGFDEEGGYYLDTDSIKEDFEKKLSEVEGDVSNLNHERNEHLRTKHMEG
Ga0208899_10342564	3300025759	Aqueous	VKSRNNITLNDDGRIDASIRIDIYYSFDEETGYHLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEPYREESGVELXVLKKQLIKNV
Ga0208899_11691373	3300025759	Aqueous	VRNNITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNYERNDHLRTKHMEG
Ga0208899_11774503	3300025759	Aqueous	EVDTEIKIDIYYGFDEEGGFYLDTDSIKEDFEKKLSELEDDVSNLNHERNEHLRTKHMEGXXAK
Ga0208767_10852214	3300025769	Aqueous	VRNNITLNDDGKIDAAIKIDIYYSFDEEEGYYLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEPYREESGVELXVLKKQLIKNV
Ga0208767_12672581	3300025769	Aqueous	DASIIIDIYYSFDEETGYYLDTDSITAEFEERLSEIEDDISNLNYERNDHLRLKHMEG
Ga0209951_10991781	3300026138	Pond Water	VNNEIANGKEKIDASISIDVYYSFDEEGGYYIDTDSMREEFEKALDEIEGDISNLNHERQEH
Ga0316201_106477504	3300032136	Worm Burrow	NVRNNITNDKDKLDASIKIDIYYSFDEEGGYYLDTDSITAEFEEKLSEIEDDISNLNHERNEHLRTKHMEG
Ga0348336_061143_673_915	3300034375	Aqueous	VRNNITLNDDGKIDAAIKIDIYYSFDEEEGYYLDTDSITAEFEERLSEIEDDISNLNHERNDHLRTKHMEPYREESGVEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097161

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences