Basic Information | |
---|---|
Family ID | F097160 |
Family Type | Metagenome |
Number of Sequences | 104 |
Average Sequence Length | 58 residues |
Representative Sequence | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR |
Number of Associated Samples | 64 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 58.25 % |
% of genes near scaffold ends (potentially truncated) | 42.31 % |
% of genes from short scaffolds (< 2000 bps) | 74.04 % |
Associated GOLD sequencing projects | 51 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
---|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (54.808 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (70.192 % of family members) |
Environment Ontology (ENVO) | Unclassified (94.231 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (98.077 % of family members) |
⦗Top⦘ |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00% | Feature Viewer |
|
|||||
Powered by Feature Viewer |
⦗Top⦘ |
Pfam ID | Name | % Frequency in 104 Family Scaffolds |
---|---|---|
PF08291 | Peptidase_M15_3 | 20.19 |
PF00476 | DNA_pol_A | 2.88 |
PF13640 | 2OG-FeII_Oxy_3 | 1.92 |
PF03118 | RNA_pol_A_CTD | 0.96 |
PF11753 | DUF3310 | 0.96 |
PF13538 | UvrD_C_2 | 0.96 |
PF16861 | Carbam_trans_C | 0.96 |
COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
---|---|---|---|
COG0749 | DNA polymerase I, 3'-5' exonuclease and polymerase domains | Replication, recombination and repair [L] | 2.88 |
COG0202 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit | Transcription [K] | 0.96 |
⦗Top⦘ |
Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 54.81 % |
All Organisms | root | All Organisms | 45.19 % |
Visualization |
---|
Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
3300002482|JGI25127J35165_1036731 | All Organisms → cellular organisms → Bacteria | 1101 | Open in IMG/M |
3300002483|JGI25132J35274_1075488 | Not Available | 702 | Open in IMG/M |
3300002488|JGI25128J35275_1012634 | All Organisms → Viruses → Predicted Viral | 2167 | Open in IMG/M |
3300002488|JGI25128J35275_1070726 | All Organisms → cellular organisms → Bacteria | 727 | Open in IMG/M |
3300002488|JGI25128J35275_1075264 | All Organisms → cellular organisms → Bacteria | 699 | Open in IMG/M |
3300005086|Ga0072334_10394522 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1065 | Open in IMG/M |
3300006027|Ga0075462_10010176 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 3042 | Open in IMG/M |
3300006735|Ga0098038_1013952 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P | 3106 | Open in IMG/M |
3300006735|Ga0098038_1021241 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P | 2469 | Open in IMG/M |
3300006735|Ga0098038_1079163 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 1154 | Open in IMG/M |
3300006735|Ga0098038_1110090 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 943 | Open in IMG/M |
3300006735|Ga0098038_1112089 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 933 | Open in IMG/M |
3300006735|Ga0098038_1123246 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 880 | Open in IMG/M |
3300006735|Ga0098038_1132349 | Not Available | 841 | Open in IMG/M |
3300006735|Ga0098038_1245861 | Not Available | 566 | Open in IMG/M |
3300006735|Ga0098038_1281021 | Not Available | 520 | Open in IMG/M |
3300006737|Ga0098037_1013825 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P | 3085 | Open in IMG/M |
3300006737|Ga0098037_1020661 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 2463 | Open in IMG/M |
3300006737|Ga0098037_1026316 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 2157 | Open in IMG/M |
3300006737|Ga0098037_1293520 | Not Available | 514 | Open in IMG/M |
3300006749|Ga0098042_1002049 | Not Available | 7452 | Open in IMG/M |
3300006749|Ga0098042_1024685 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 1742 | Open in IMG/M |
3300006749|Ga0098042_1050976 | Not Available | 1123 | Open in IMG/M |
3300006749|Ga0098042_1067619 | All Organisms → cellular organisms → Bacteria | 941 | Open in IMG/M |
3300006749|Ga0098042_1096453 | All Organisms → cellular organisms → Bacteria | 752 | Open in IMG/M |
3300006749|Ga0098042_1104903 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 714 | Open in IMG/M |
3300006749|Ga0098042_1118540 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 662 | Open in IMG/M |
3300006749|Ga0098042_1121239 | All Organisms → cellular organisms → Bacteria | 652 | Open in IMG/M |
3300006752|Ga0098048_1087776 | Not Available | 947 | Open in IMG/M |
3300006752|Ga0098048_1139020 | Not Available | 726 | Open in IMG/M |
3300006754|Ga0098044_1253367 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 681 | Open in IMG/M |
3300006789|Ga0098054_1123592 | Not Available | 962 | Open in IMG/M |
3300006924|Ga0098051_1014068 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 2385 | Open in IMG/M |
3300006925|Ga0098050_1115505 | Not Available | 682 | Open in IMG/M |
3300006929|Ga0098036_1195887 | Not Available | 614 | Open in IMG/M |
3300006990|Ga0098046_1099713 | Not Available | 646 | Open in IMG/M |
3300007963|Ga0110931_1010784 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 2789 | Open in IMG/M |
3300008050|Ga0098052_1032603 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 2357 | Open in IMG/M |
3300009071|Ga0115566_10694027 | Not Available | 564 | Open in IMG/M |
3300009193|Ga0115551_1265401 | Not Available | 756 | Open in IMG/M |
3300009433|Ga0115545_1300589 | Not Available | 533 | Open in IMG/M |
3300009435|Ga0115546_1161273 | Not Available | 787 | Open in IMG/M |
3300009472|Ga0115554_1171330 | Not Available | 890 | Open in IMG/M |
3300009505|Ga0115564_10478967 | Not Available | 602 | Open in IMG/M |
3300009528|Ga0114920_10738212 | Not Available | 674 | Open in IMG/M |
3300010148|Ga0098043_1004262 | Not Available | 5012 | Open in IMG/M |
3300010148|Ga0098043_1092511 | Not Available | 889 | Open in IMG/M |
3300010148|Ga0098043_1148830 | Not Available | 663 | Open in IMG/M |
3300010148|Ga0098043_1206380 | Not Available | 543 | Open in IMG/M |
3300010149|Ga0098049_1108194 | Not Available | 868 | Open in IMG/M |
3300010150|Ga0098056_1321917 | All Organisms → cellular organisms → Bacteria | 508 | Open in IMG/M |
3300010151|Ga0098061_1124958 | Not Available | 945 | Open in IMG/M |
3300010155|Ga0098047_10094433 | Not Available | 1168 | Open in IMG/M |
3300017708|Ga0181369_1005742 | Not Available | 3286 | Open in IMG/M |
3300017708|Ga0181369_1080410 | All Organisms → cellular organisms → Bacteria | 695 | Open in IMG/M |
3300017710|Ga0181403_1003133 | All Organisms → Viruses → Predicted Viral | 3720 | Open in IMG/M |
3300017713|Ga0181391_1136326 | Not Available | 546 | Open in IMG/M |
3300017721|Ga0181373_1047445 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae | 782 | Open in IMG/M |
3300017743|Ga0181402_1067868 | Not Available | 944 | Open in IMG/M |
3300017745|Ga0181427_1159075 | Not Available | 546 | Open in IMG/M |
3300017757|Ga0181420_1207603 | Not Available | 567 | Open in IMG/M |
3300017758|Ga0181409_1020938 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae | 2114 | Open in IMG/M |
3300017767|Ga0181406_1020659 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae | 2085 | Open in IMG/M |
3300017769|Ga0187221_1075671 | Not Available | 1050 | Open in IMG/M |
3300017782|Ga0181380_1120277 | Not Available | 903 | Open in IMG/M |
3300017782|Ga0181380_1290889 | All Organisms → cellular organisms → Bacteria | 536 | Open in IMG/M |
3300017783|Ga0181379_1078583 | Not Available | 1227 | Open in IMG/M |
3300017951|Ga0181577_10360120 | Not Available | 932 | Open in IMG/M |
3300018416|Ga0181553_10009691 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 7730 | Open in IMG/M |
3300020388|Ga0211678_10254906 | All Organisms → cellular organisms → Bacteria | 723 | Open in IMG/M |
3300020404|Ga0211659_10231412 | Not Available | 823 | Open in IMG/M |
3300021425|Ga0213866_10311226 | Not Available | 787 | Open in IMG/M |
3300022074|Ga0224906_1000638 | Not Available | 18953 | Open in IMG/M |
3300022074|Ga0224906_1025597 | All Organisms → Viruses | 2066 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10008581 | Not Available | 7635 | Open in IMG/M |
3300025066|Ga0208012_1019185 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 1118 | Open in IMG/M |
3300025070|Ga0208667_1009999 | All Organisms → Viruses | 2211 | Open in IMG/M |
3300025070|Ga0208667_1015523 | All Organisms → Viruses | 1595 | Open in IMG/M |
3300025070|Ga0208667_1058709 | Not Available | 605 | Open in IMG/M |
3300025085|Ga0208792_1031603 | All Organisms → Viruses | 1048 | Open in IMG/M |
3300025086|Ga0208157_1013744 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P | 2602 | Open in IMG/M |
3300025086|Ga0208157_1027379 | All Organisms → Viruses | 1671 | Open in IMG/M |
3300025086|Ga0208157_1100664 | Not Available | 695 | Open in IMG/M |
3300025086|Ga0208157_1124687 | Not Available | 594 | Open in IMG/M |
3300025086|Ga0208157_1150184 | Not Available | 513 | Open in IMG/M |
3300025098|Ga0208434_1084258 | Not Available | 642 | Open in IMG/M |
3300025099|Ga0208669_1062232 | All Organisms → cellular organisms → Bacteria | 831 | Open in IMG/M |
3300025101|Ga0208159_1008994 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales | 2785 | Open in IMG/M |
3300025101|Ga0208159_1078733 | Not Available | 626 | Open in IMG/M |
3300025101|Ga0208159_1080845 | Not Available | 614 | Open in IMG/M |
3300025102|Ga0208666_1004329 | Not Available | 5526 | Open in IMG/M |
3300025102|Ga0208666_1125998 | Not Available | 601 | Open in IMG/M |
3300025103|Ga0208013_1130234 | Not Available | 614 | Open in IMG/M |
3300025110|Ga0208158_1107023 | All Organisms → Viruses | 654 | Open in IMG/M |
3300025127|Ga0209348_1093143 | Not Available | 946 | Open in IMG/M |
3300025127|Ga0209348_1115742 | Not Available | 818 | Open in IMG/M |
3300025128|Ga0208919_1015597 | Not Available | 2952 | Open in IMG/M |
3300025128|Ga0208919_1101313 | Not Available | 927 | Open in IMG/M |
3300025128|Ga0208919_1256499 | Not Available | 506 | Open in IMG/M |
3300025133|Ga0208299_1150784 | Not Available | 731 | Open in IMG/M |
3300025712|Ga0209305_1145358 | All Organisms → Viruses | 725 | Open in IMG/M |
3300025803|Ga0208425_1006561 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae | 3343 | Open in IMG/M |
3300025890|Ga0209631_10092059 | All Organisms → Viruses | 1773 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 70.19% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 12.50% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 6.73% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 1.92% |
Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 1.92% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 1.92% |
Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 0.96% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.96% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 0.96% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 0.96% |
Water | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water | 0.96% |
Visualization |
---|
Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300002482 | Marine viral communities from the Pacific Ocean - ETNP_2_30 | Environmental | Open in IMG/M |
3300002483 | Marine viral communities from the Pacific Ocean - ETNP_6_30 | Environmental | Open in IMG/M |
3300002488 | Marine viral communities from the Pacific Ocean - ETNP_2_60 | Environmental | Open in IMG/M |
3300005086 | Microbial Community from Halfdan Field MHDA3 | Environmental | Open in IMG/M |
3300006027 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA | Environmental | Open in IMG/M |
3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
3300006749 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG | Environmental | Open in IMG/M |
3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
3300006754 | Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG | Environmental | Open in IMG/M |
3300006789 | Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG | Environmental | Open in IMG/M |
3300006924 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG | Environmental | Open in IMG/M |
3300006925 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG | Environmental | Open in IMG/M |
3300006929 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG | Environmental | Open in IMG/M |
3300006990 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG | Environmental | Open in IMG/M |
3300007963 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2) | Environmental | Open in IMG/M |
3300008050 | Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG | Environmental | Open in IMG/M |
3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
3300009193 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 | Environmental | Open in IMG/M |
3300009433 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 | Environmental | Open in IMG/M |
3300009435 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 | Environmental | Open in IMG/M |
3300009472 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 | Environmental | Open in IMG/M |
3300009505 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 | Environmental | Open in IMG/M |
3300009528 | Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG | Environmental | Open in IMG/M |
3300010148 | Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG | Environmental | Open in IMG/M |
3300010149 | Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG | Environmental | Open in IMG/M |
3300010150 | Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG | Environmental | Open in IMG/M |
3300010151 | Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG | Environmental | Open in IMG/M |
3300010155 | Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG | Environmental | Open in IMG/M |
3300017708 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG | Environmental | Open in IMG/M |
3300017710 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28 | Environmental | Open in IMG/M |
3300017713 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 | Environmental | Open in IMG/M |
3300017721 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG | Environmental | Open in IMG/M |
3300017743 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17 | Environmental | Open in IMG/M |
3300017745 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15 | Environmental | Open in IMG/M |
3300017757 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22 | Environmental | Open in IMG/M |
3300017758 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30 | Environmental | Open in IMG/M |
3300017767 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20 | Environmental | Open in IMG/M |
3300017769 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2) | Environmental | Open in IMG/M |
3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
3300017783 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10 | Environmental | Open in IMG/M |
3300017951 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018416 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300020388 | Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064) | Environmental | Open in IMG/M |
3300020404 | Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978) | Environmental | Open in IMG/M |
3300021425 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284 | Environmental | Open in IMG/M |
3300022074 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2) | Environmental | Open in IMG/M |
3300024255 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG | Environmental | Open in IMG/M |
3300025066 | Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
3300025070 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
3300025085 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025086 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025098 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025099 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025101 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025102 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
3300025103 | Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025110 | Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025127 | Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes) | Environmental | Open in IMG/M |
3300025128 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025133 | Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025712 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes) | Environmental | Open in IMG/M |
3300025803 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025890 | Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes) | Environmental | Open in IMG/M |
Geographical Distribution | |
---|---|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI25127J35165_10367312 | 3300002482 | Marine | MINVVNGICTDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLRRLIFWTR* |
JGI25127J35165_10539932 | 3300002482 | Marine | MINNGICIDCGHRHRGIAQCSFCDCIWENIKLMEDNMIKKIWKKIKELSKRLMFWTR* |
JGI25132J35274_10754881 | 3300002483 | Marine | CMDCGHRHRGVPQCSFCDCVWETLKLVEDSMIKKIWKKIKEFSKRLLFWTR* |
JGI25128J35275_10126347 | 3300002488 | Marine | MRLRRKKMINNGICIDCGHRHRGIAQCSFCDCVWETIKLVEDNMIKKIWKKIKELSKRLMFWTR* |
JGI25128J35275_10707261 | 3300002488 | Marine | MSSICKDCGHRHRGIAECKFCDCVWKVAQEKISMIKKIKELLKRLLFWTR* |
JGI25128J35275_10752642 | 3300002488 | Marine | MINNGICMDCGHRHRGIAQCSFCDCVWETIKLMEDNMIKKIWKKIKELSKRLMFWTR* |
Ga0072334_103945222 | 3300005086 | Water | MSSICKDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR* |
Ga0075462_100101761 | 3300006027 | Aqueous | SSICTDCGHRHRGIAECKFCDCVWETVQEKINIVKKIKELLKRLLFWTR* |
Ga0098038_10139521 | 3300006735 | Marine | KQKILIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLLFWTR* |
Ga0098038_10212412 | 3300006735 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINMIKKIKEFLRRLIFWTR* |
Ga0098038_10791632 | 3300006735 | Marine | MINVVNGICMDCGHRHRGIAKCSFCDCVWETIKLVEENMIKKIWNKIKNFSRRLIFWTR* |
Ga0098038_11100902 | 3300006735 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKISMIKKIKEFLRRLIFWTR* |
Ga0098038_11120891 | 3300006735 | Marine | RKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKEVLKRLLFWTR* |
Ga0098038_11232462 | 3300006735 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVKLVEENMIKKIWNKIKIFCRRLVFWTR* |
Ga0098038_11323492 | 3300006735 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWETIKIVEDSMIKKIWKKIKEFSKRLIFWTR* |
Ga0098038_12458613 | 3300006735 | Marine | IHNSGELKTLIISFTKWRKRKMINVVNGICMDCGHRHRGIAKCSFCDCVWETIKVVEDNMIRKIWNKIKEFSRRLMFWTR* |
Ga0098038_12810212 | 3300006735 | Marine | IISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLKRLLFWTR* |
Ga0098037_10138251 | 3300006737 | Marine | SFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLLFWTR* |
Ga0098037_10206617 | 3300006737 | Marine | MTSICKDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR* |
Ga0098037_10263168 | 3300006737 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKEVLKRLLFWTR* |
Ga0098037_12935202 | 3300006737 | Marine | MINVVNGICMDCGHRHRGIAECSFCDCVWETIKVVEDNMIRKIWNKIKEFSRRLMFWTR* |
Ga0098042_10020492 | 3300006749 | Marine | MINNGICMDCGHRHRGVAQCSFCDCVWETIKLVEDNMIKKIWKKIKEFSKRLIFWTR* |
Ga0098042_10246853 | 3300006749 | Marine | MDCGHRHRGIAQCSFCDCVWETIKIVEDSMIKKIWKKIKEFSKRLIFWTR* |
Ga0098042_10509762 | 3300006749 | Marine | MINVVNGICMDCGHRHRGIAKCSFCDCVWETIKVVEDNMIRKIWNKIKEFSRRLMFWTR* |
Ga0098042_10676192 | 3300006749 | Marine | MINVVNGVCMDCGHRHRGVPQCSFCDCVWETLKLVEDSMIKKIWKKIKEFSKRLLFWTR* |
Ga0098042_10964532 | 3300006749 | Marine | MINIVNGICIDCGHRHRGVAQCSFCDCVWETVQEKISMIKKIKDFLRRLIFWTR* |
Ga0098042_11049032 | 3300006749 | Marine | MINVVNGICMDCGHRHREVAQCSFCDCVWETVQEKISIIKKIKEFFKRLLFWTR* |
Ga0098042_11185402 | 3300006749 | Marine | MINVVNGICMDCGHRHRGIAQCNFCDCVWEKISMIKKIKEFLRRLIFWTR* |
Ga0098042_11212391 | 3300006749 | Marine | MINVVNGICMDCGHRHKGIAQCSFCDCVWEITQEKISMIKKIKEFLRRLIFWTR* |
Ga0098048_10877761 | 3300006752 | Marine | IISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR* |
Ga0098048_11390201 | 3300006752 | Marine | MINVVNGICMDCGHRHRGIAKCSFCDCVWETMKLVEENMIKKIWNKIKNFSRRLIFWTR* |
Ga0098044_12533672 | 3300006754 | Marine | MINVVNGICMDCGHRHRGIAQCSFCGCVWETVQEKISMVKKIKEFLKRLLFWTR* |
Ga0098054_11235921 | 3300006789 | Marine | KQKILIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR* |
Ga0098051_10140681 | 3300006924 | Marine | ISFTKLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKEVLKRLLFWTR* |
Ga0098050_11155052 | 3300006925 | Marine | NGKQKIPIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLKRLLFWTR* |
Ga0098036_11958871 | 3300006929 | Marine | GICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR* |
Ga0098046_10997131 | 3300006990 | Marine | LRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR* |
Ga0110931_10107849 | 3300007963 | Marine | KKMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKEVLKRLLFWTR* |
Ga0098052_10326031 | 3300008050 | Marine | LRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKEVLKRLLFWTR* |
Ga0115566_106940271 | 3300009071 | Pelagic Marine | FWNLYTYHSVNNHRAAIMSSICTDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR* |
Ga0115551_12654011 | 3300009193 | Pelagic Marine | NGKQKTLIISFTRLRRKNMSSICKDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR* |
Ga0115545_13005891 | 3300009433 | Pelagic Marine | RAAIMSSICTDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR* |
Ga0115546_11612732 | 3300009435 | Pelagic Marine | MINNGICIDCGHRHRGIAQCSFCDCVWETIKLVEDNMLKKIWKKIKELSKRLMFWTR* |
Ga0115554_11713302 | 3300009472 | Pelagic Marine | MSSICKDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLFFWTR* |
Ga0115564_104789671 | 3300009505 | Pelagic Marine | SFTRLRRKNMSSICKDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR* |
Ga0114920_107382122 | 3300009528 | Deep Subsurface | MINVINGICTDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLLFWTR* |
Ga0098043_10042623 | 3300010148 | Marine | MDCGHRHRGVPQCSFCDCVWETLKLVEDSMIKKIWKKIKEFSKRLLFWTR* |
Ga0098043_10925111 | 3300010148 | Marine | PIISFTKLRRKNMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKISMIKKIKEFLRRLIFWTR* |
Ga0098043_11488302 | 3300010148 | Marine | GICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLLFWTR* |
Ga0098043_12063802 | 3300010148 | Marine | VNGKQKIPIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLKRLLFWTR* |
Ga0098049_11081941 | 3300010149 | Marine | MINVVNGICMDCGHRHRGVAECSFCECVWETVQEKISMIKKIKNFLRRLIFWTR* |
Ga0098056_13219171 | 3300010150 | Marine | MINIVNGICIDCGHRHRGVAQCSFCDCVWETVQEKISMIKKIKEFLRRLIFWTR* |
Ga0098061_11249581 | 3300010151 | Marine | ISFTKLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR* |
Ga0098047_100944332 | 3300010155 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR* |
Ga0181369_10057423 | 3300017708 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINMIKKIKEFLRRLIFWTR |
Ga0181369_10804102 | 3300017708 | Marine | MINVVNGICMDCGHRHRGIAKCSFCDCVWETIKLVEDNMIRKIWNKIKEFSRRLMFWTR |
Ga0181403_100313313 | 3300017710 | Seawater | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLFFWTR |
Ga0181391_11363262 | 3300017713 | Seawater | YRSVNNHRAAIMSSICTDCGHRHRGIAQCSFCGCVWETVQEKISMVKKIKEFLRRLLFWT |
Ga0181373_10474451 | 3300017721 | Marine | LIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKEVLKRLLFWTR |
Ga0181402_10678682 | 3300017743 | Seawater | MINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKISMIKKIKKILRRLIFWK |
Ga0181427_11590752 | 3300017745 | Seawater | MINVVNGICMNCGHRHREIAQCSFCDCVWEVVQEKRSMVKKIKEFLRRLFFWTR |
Ga0181420_12076032 | 3300017757 | Seawater | IQVRGKQKTPTISFTKLRRRKMINNGICMDCGHRHRGIAQCSFCDCVWETIKLVEDSMIKKIWEKIKSWFWVKD |
Ga0181409_10209381 | 3300017758 | Seawater | MDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLFFWTR |
Ga0181406_10206591 | 3300017767 | Seawater | MSSICTDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLFFWTR |
Ga0187221_10756713 | 3300017769 | Seawater | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKINMVKKIKEFLRRLLFWTR |
Ga0181380_11202771 | 3300017782 | Seawater | NNHRAAIMSSICTDCGHRHRGIAQCSFCGCVWETVQEKISMVKKIKEFLRRLLFWTR |
Ga0181380_12908892 | 3300017782 | Seawater | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKINMVKKIKEFLRRLLF |
Ga0181379_10785831 | 3300017783 | Seawater | NHRAAIMSSICTDCGHRHRGIAQCSFCGCVWETVQEKISMVKKIKEFLRRLLFWTR |
Ga0181577_103601204 | 3300017951 | Salt Marsh | SGELKTLIISFTKWRKRKMINVVNGICTDCGHRHRGIAQCNFCDCVWETIKIVEDNMIKKIWKKIKEFSRRLIFWTR |
Ga0181553_100096913 | 3300018416 | Salt Marsh | MINVVNGICTDCGHRHRGIAQCNFCDCVWETIKIVEDNMIKKIWKKIKEFSRRLIFWTR |
Ga0211678_102549062 | 3300020388 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLLFWTR |
Ga0211659_102314122 | 3300020404 | Marine | MINVVNGICMDCGHRHRGIAKCSFCDCVWETIKVVEDNMIRKIWNKIKEFSRRLMFWTR |
Ga0213866_103112262 | 3300021425 | Seawater | MSSICKDCGHRHRGIAECKFCDCVWETVQEKINIVKKIKEFLRRLLFWTR |
Ga0224906_100063828 | 3300022074 | Seawater | MINVVNGICTDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLRRLIFWTR |
Ga0224906_10255973 | 3300022074 | Seawater | MINVVNGICTDCGHRHRGIAQCSFCDCIWETVQEKISMIKKIKEFLKRLLFWTR |
(restricted) Ga0233438_1000858114 | 3300024255 | Seawater | MINNGICIDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKQFLKRLLFWTR |
Ga0208012_10191854 | 3300025066 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKEVLKRLLFWTR |
Ga0208667_10099992 | 3300025070 | Marine | MINVVNGICMDCGHRHRGVAECSFCECVWETVQEKISMIKKIKNFLRRLIFWTR |
Ga0208667_10155232 | 3300025070 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR |
Ga0208667_10587092 | 3300025070 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWETIKIVEDSMIKKIWKKIKEFSKRLIFWTR |
Ga0208792_10316032 | 3300025085 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLKRLLFWTR |
Ga0208157_10137441 | 3300025086 | Marine | GKQKILIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLRRLLFWTR |
Ga0208157_10273792 | 3300025086 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVKLVEENMIKKIWNKIKIFCRRLVFWTR |
Ga0208157_11006641 | 3300025086 | Marine | RVNGKQKIPIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLKRLLFWTR |
Ga0208157_11246872 | 3300025086 | Marine | KIRVDGKQKIPIISFTKLRRKNMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKISMIKKIKEFLRRLIFWTR |
Ga0208157_11501842 | 3300025086 | Marine | MINVVNGVCMDCGHRHRGVPQCSFCDCVWETLKLVEDSMIKKIWKKIKEFSKRLLFWTR |
Ga0208434_10842582 | 3300025098 | Marine | NGKQKIPIISFTRLRRKNMTSICKDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR |
Ga0208669_10622322 | 3300025099 | Marine | MINVVNGICMDCGHRHRGIAKCSFCDCVWETIKLVEENMIKKIWNKIKNFSRRLIFWTR |
Ga0208159_10089941 | 3300025101 | Marine | KKMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKINIIKKIKEVLKRLLFWTR |
Ga0208159_10787332 | 3300025101 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKISMIKKIKEFLRRLIFWTR |
Ga0208159_10808452 | 3300025101 | Marine | MINVVNGICMDCGHRHRGIAQCNFCDCVWEKISMIKKIKEFLRRLIFWTR |
Ga0208666_10043291 | 3300025102 | Marine | GKQKILIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR |
Ga0208666_11259981 | 3300025102 | Marine | QKIPIISFTKLRRKNMINVVNGICMDCGHRHRGIAQCSFCDCVWEITQEKISMIKKIKEFLRRLIFWTR |
Ga0208013_11302342 | 3300025103 | Marine | TGLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLKRLLFWTR |
Ga0208158_11070232 | 3300025110 | Marine | MINVVNGICMDCGHRHKGIAQCSFCDCVWEITQEKISMIKKIKEFLRRLIFWTR |
Ga0209348_10931431 | 3300025127 | Marine | MINIVNGICIDCGHRHRGVAQCSFCDCVWETVQEKISMIKKIKDFLRRLIFWTR |
Ga0209348_11157422 | 3300025127 | Marine | MSSICKDCGHRHRGIAECKFCDCVWKVAQEKISMIKKIKELLKRLLFWTR |
Ga0208919_101559712 | 3300025128 | Marine | MINVVNGICMDCGHRHRGIAECSFCDCVWETIKVVEDNMIRKIWNKIKEFSRRLMFWTR |
Ga0208919_11013133 | 3300025128 | Marine | MINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFL |
Ga0208919_12564991 | 3300025128 | Marine | KIPIISFTRLRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWEKISMIKKIKEFLKRLLFWTR |
Ga0208299_11507843 | 3300025133 | Marine | LRRKKMINVVNGICMDCGHRHRGIAQCSFCDCVWETVQEKISMVKKIKEFLKRLLFWTR |
Ga0209305_11453582 | 3300025712 | Pelagic Marine | MSSICKDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR |
Ga0208425_10065611 | 3300025803 | Aqueous | VIIVSSICTDCGHRHRGIAECKFCDCVWETVQEKINIVKKIKELLKRLLFWTR |
Ga0209631_100920594 | 3300025890 | Pelagic Marine | MSSICTDCGHRHRGIAECKFCDCVWEVAQEKISMIKKIKELLKRLLFWTR |
⦗Top⦘ |