Metagenome / Metatranscriptome Family F097117

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097117
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	54 residues
Representative Sequence	MNHSPFRAYCIEKWYEYKDEVRAWEKRDVEGSPEDYFQKYKWFLKEKYKQENR
Number of Associated Samples	62
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.12 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	72.12 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.423 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (56.731 % of family members)
Environment Ontology (ENVO)	Unclassified (56.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.308 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.38% β-sheet: 0.00% Coil/Unstructured: 50.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00004	AAA	18.27
PF00166	Cpn10	7.69
PF05656	DUF805	3.85
PF05496	RuvB_N	1.92
PF01467	CTP_transf_like	1.92
PF01258	zf-dskA_traR	1.92
PF02675	AdoMet_dc	1.92
PF13640	2OG-FeII_Oxy_3	1.92
PF00574	CLP_protease	1.92
PF07726	AAA_3	1.92
PF02739	5_3_exonuc_N	0.96
PF02777	Sod_Fe_C	0.96
PF03567	Sulfotransfer_2	0.96
PF01471	PG_binding_1	0.96
PF13396	PLDc_N	0.96
PF13186	SPASM	0.96
PF07733	DNA_pol3_alpha	0.96
PF13759	2OG-FeII_Oxy_5	0.96
PF04879	Molybdop_Fe4S4	0.96
PF04055	Radical_SAM	0.96
PF02562	PhoH	0.96
PF14090	HTH_39	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	7.69
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.85
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	3.85
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	3.85
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.92
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	1.92
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	1.92
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	1.92
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.96
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.96
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.96
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.96
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.96
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
All Organisms	root	All Organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Viruses	superkingdom	All Organisms → Viruses	19.23 %
cellular organisms	root	All Organisms → cellular organisms	16.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.46 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.85 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.88 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	7.69 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.88 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	2.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7.69 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.88 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.88 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	7.69 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.88 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	2.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	7.69 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	6.73 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.88 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	6.73 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.88 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.38 %
Crocinitomicaceae bacterium TMED45	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	6.73 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.88 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2222084003\|2222413556	Not Available	550	Open in IMG/M
3300000101\|DelMOSum2010_c10101163	Not Available	1197	Open in IMG/M
3300004369\|Ga0065726_15199	Not Available	14963	Open in IMG/M
3300004448\|Ga0065861_1105640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	852	Open in IMG/M
3300005512\|Ga0074648_1000024	Not Available	163460	Open in IMG/M
3300006752\|Ga0098048_1055635	Not Available	1235	Open in IMG/M
3300006789\|Ga0098054_1282890	Not Available	595	Open in IMG/M
3300006793\|Ga0098055_1001017	Not Available	15557	Open in IMG/M
3300006802\|Ga0070749_10185731	All Organisms → Viruses → Predicted Viral	1195	Open in IMG/M
3300006802\|Ga0070749_10545071	Not Available	629	Open in IMG/M
3300006802\|Ga0070749_10564613	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	616	Open in IMG/M
3300006924\|Ga0098051_1014237	Not Available	2367	Open in IMG/M
3300007234\|Ga0075460_10258973	Not Available	578	Open in IMG/M
3300007541\|Ga0099848_1068360	All Organisms → Viruses → Predicted Viral	1402	Open in IMG/M
3300007609\|Ga0102945_1000780	Not Available	9464	Open in IMG/M
3300007609\|Ga0102945_1026535	Not Available	1238	Open in IMG/M
3300009027\|Ga0102957_1387862	Not Available	521	Open in IMG/M
3300016776\|Ga0182046_1440147	Not Available	680	Open in IMG/M
3300016791\|Ga0182095_1215080	All Organisms → Viruses → Predicted Viral	1331	Open in IMG/M
3300016791\|Ga0182095_1628599	Not Available	840	Open in IMG/M
3300016797\|Ga0182090_1481188	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3605	Open in IMG/M
3300017697\|Ga0180120_10221872	Not Available	776	Open in IMG/M
3300017824\|Ga0181552_10051997	Not Available	2402	Open in IMG/M
3300017824\|Ga0181552_10133874	All Organisms → Viruses → Predicted Viral	1337	Open in IMG/M
3300017824\|Ga0181552_10153309	All Organisms → Viruses → Predicted Viral	1226	Open in IMG/M
3300017824\|Ga0181552_10340321	Not Available	730	Open in IMG/M
3300017824\|Ga0181552_10453972	Not Available	608	Open in IMG/M
3300017824\|Ga0181552_10536608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	548	Open in IMG/M
3300017949\|Ga0181584_10016082	Not Available	5507	Open in IMG/M
3300017949\|Ga0181584_10054389	All Organisms → Viruses → Predicted Viral	2820	Open in IMG/M
3300017949\|Ga0181584_10292846	Not Available	1043	Open in IMG/M
3300017949\|Ga0181584_10445418	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	804	Open in IMG/M
3300017950\|Ga0181607_10006315	Not Available	9960	Open in IMG/M
3300017950\|Ga0181607_10009385	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	7995	Open in IMG/M
3300017950\|Ga0181607_10016803	Not Available	5640	Open in IMG/M
3300017950\|Ga0181607_10039904	All Organisms → Viruses → Predicted Viral	3287	Open in IMG/M
3300017950\|Ga0181607_10117965	All Organisms → Viruses → Predicted Viral	1650	Open in IMG/M
3300017950\|Ga0181607_10163586	All Organisms → Viruses → Predicted Viral	1339	Open in IMG/M
3300017950\|Ga0181607_10308391	Not Available	887	Open in IMG/M
3300017950\|Ga0181607_10310311	Not Available	883	Open in IMG/M
3300017956\|Ga0181580_10175942	Not Available	1517	Open in IMG/M
3300017956\|Ga0181580_10455135	Not Available	843	Open in IMG/M
3300017967\|Ga0181590_10217305	Not Available	1427	Open in IMG/M
3300017969\|Ga0181585_10058858	All Organisms → Viruses → Predicted Viral	2977	Open in IMG/M
3300017986\|Ga0181569_10670079	Not Available	688	Open in IMG/M
3300018036\|Ga0181600_10240669	Not Available	940	Open in IMG/M
3300018036\|Ga0181600_10352491	Not Available	725	Open in IMG/M
3300018041\|Ga0181601_10392864	Not Available	743	Open in IMG/M
3300018041\|Ga0181601_10542801	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	601	Open in IMG/M
3300018041\|Ga0181601_10604811	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	561	Open in IMG/M
3300018048\|Ga0181606_10033521	All Organisms → Viruses → Predicted Viral	3664	Open in IMG/M
3300018048\|Ga0181606_10498106	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	637	Open in IMG/M
3300018410\|Ga0181561_10130711	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300018410\|Ga0181561_10446471	Not Available	584	Open in IMG/M
3300018413\|Ga0181560_10019706	All Organisms → Viruses	4868	Open in IMG/M
3300018413\|Ga0181560_10320700	Not Available	722	Open in IMG/M
3300018415\|Ga0181559_10395210	Not Available	760	Open in IMG/M
3300018415\|Ga0181559_10593668	Not Available	598	Open in IMG/M
3300018416\|Ga0181553_10364562	Not Available	791	Open in IMG/M
3300018420\|Ga0181563_10833875	Not Available	502	Open in IMG/M
3300018428\|Ga0181568_10138289	All Organisms → cellular organisms → Bacteria → Proteobacteria	2036	Open in IMG/M
3300018428\|Ga0181568_11033736	Not Available	624	Open in IMG/M
3300018876\|Ga0181564_10047633	All Organisms → Viruses → Predicted Viral	2940	Open in IMG/M
3300019459\|Ga0181562_10249311	Not Available	904	Open in IMG/M
3300019459\|Ga0181562_10525568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	560	Open in IMG/M
3300020053\|Ga0181595_10177601	Not Available	954	Open in IMG/M
3300020165\|Ga0206125_10079881	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1446	Open in IMG/M
3300020173\|Ga0181602_10024432	All Organisms → Viruses → Predicted Viral	3670	Open in IMG/M
3300020173\|Ga0181602_10378452	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	561	Open in IMG/M
3300020177\|Ga0181596_10284056	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	673	Open in IMG/M
3300020177\|Ga0181596_10352912	Not Available	572	Open in IMG/M
3300020178\|Ga0181599_1224031	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	739	Open in IMG/M
3300020188\|Ga0181605_10020207	Not Available	4240	Open in IMG/M
3300021957\|Ga0222717_10000183	Not Available	55094	Open in IMG/M
3300021957\|Ga0222717_10046673	Not Available	2821	Open in IMG/M
3300021957\|Ga0222717_10380920	Not Available	785	Open in IMG/M
3300021958\|Ga0222718_10461449	Not Available	622	Open in IMG/M
3300021959\|Ga0222716_10000184	Not Available	51186	Open in IMG/M
3300021959\|Ga0222716_10005753	Not Available	9625	Open in IMG/M
3300021959\|Ga0222716_10012719	Not Available	6354	Open in IMG/M
3300021959\|Ga0222716_10655536	Not Available	564	Open in IMG/M
3300021960\|Ga0222715_10001480	Not Available	22344	Open in IMG/M
3300021960\|Ga0222715_10122019	Not Available	1654	Open in IMG/M
3300021960\|Ga0222715_10351707	Not Available	820	Open in IMG/M
3300021962\|Ga0222713_10747123	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	552	Open in IMG/M
3300021964\|Ga0222719_10138283	All Organisms → Viruses → Predicted Viral	1732	Open in IMG/M
3300021964\|Ga0222719_10169561	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300021964\|Ga0222719_10371983	Not Available	899	Open in IMG/M
3300022198\|Ga0196905_1088511	Not Available	837	Open in IMG/M
3300022847\|Ga0222633_1008309	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2345	Open in IMG/M
3300022907\|Ga0255775_1263656	Not Available	620	Open in IMG/M
3300022926\|Ga0255753_1258381	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	697	Open in IMG/M
3300022927\|Ga0255769_10022000	All Organisms → cellular organisms → Bacteria	4527	Open in IMG/M
3300022927\|Ga0255769_10162548	All Organisms → Viruses → Predicted Viral	1031	Open in IMG/M
3300023273\|Ga0255763_1186141	Not Available	833	Open in IMG/M
3300024183\|Ga0228603_1059891	Not Available	591	Open in IMG/M
3300024185\|Ga0228669_1056022	Not Available	797	Open in IMG/M
3300024291\|Ga0228660_1015755	Not Available	1433	Open in IMG/M
3300025084\|Ga0208298_1009753	Not Available	2401	Open in IMG/M
3300025085\|Ga0208792_1032592	Not Available	1028	Open in IMG/M
3300026097\|Ga0209953_1027421	Not Available	935	Open in IMG/M
3300026097\|Ga0209953_1035065	Not Available	773	Open in IMG/M
3300028126\|Ga0228648_1076741	Not Available	634	Open in IMG/M
3300031675\|Ga0302122_10211375	Not Available	726	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	92.31%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	7.69%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	56.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.42%
Coastal	Environmental → Aquatic → Marine → Coastal	11.54%
Oceanic	Environmental → Aquatic → Marine → Oceanic	7.69%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	7.69%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.96%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.96%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	56.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.42%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.54%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	6.73%
Oil-Contaminated	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated	0.96%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.96%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.96%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	56.73%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	14.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.73%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.77%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	4.81%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.85%
Marine	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated → Marine	0.96%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.96%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.96%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.96%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.96%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline	0.96%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2222084003	Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - Ctl_5_microcosm	Environmental	Open in IMG/M
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300004369	Saline microbial communities from the South Caspian sea - cas-15	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007609	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300016776	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011505AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022847	Saline water microbial communities from Ace Lake, Antarctica - #48	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300024183	Seawater microbial communities from Monterey Bay, California, United States - 3D	Environmental	Open in IMG/M
3300024185	Seawater microbial communities from Monterey Bay, California, United States - 84D	Environmental	Open in IMG/M
3300024291	Seawater microbial communities from Monterey Bay, California, United States - 74D	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300026097	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300028126	Seawater microbial communities from Monterey Bay, California, United States - 60D	Environmental	Open in IMG/M
3300031675	Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCM	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222493305	2222084003	Marine	MIRSPFRAFVYDKWYEYNDEVRVWEKREVEGSPEDYFQKYKWFLKAKYKQEK
DelMOSum2010_101011634	3300000101	Marine	MSDDMFKLPEISDFRRYCDEKWYEYKDEVESWEHKQVTGSSKDYFNKYKWFLKEKYKAENK*
Ga0065726_1519910	3300004369	Saline	MDKSSFRTYCYEKWYEYKDEVLQWERRTVTGNPEDYFRKWKWFLKAKYKAENK*
Ga0065861_11056402	3300004448	Marine	MSDDMFKLTEISDFRRYCDNKWFEYKDEVLEWERRVVKESPQKYFNKYKWFLKQKYKAENK*
Ga0074648_1000024133	3300005512	Saline Water And Sediment	MEGQETMNRSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQDDKQSGSI*
Ga0098048_10556354	3300006752	Marine	MSDDMFKLPEISDFRRYCDVKWYEYKDEVEAWERKQVTGSPKDYFNKYKWFLKEKYKAENK*
Ga0098054_12828901	3300006789	Marine	MKTSSFRRFCIENWYSYKDEVEAWEKRQVKGKEEEYFKKYKWFLIAKYKQEN
Ga0098055_100101714	3300006793	Marine	MKTSSFRRFCIENWYSYKDEVEAWEKRQVKGKEEEYFKKYKWFLKAKYKQEN*
Ga0070749_101857312	3300006802	Aqueous	MMKSPFRAYCIEKWYEYKEEVFSWEKRVVEGPPEEYFKKYKWFLKAKYKQDNKIARQEENTSV*
Ga0070749_105450712	3300006802	Aqueous	MNRSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQDGKQSESI*
Ga0070749_105646132	3300006802	Aqueous	MPKNSEFRHYVYEKWFEYKDEVLAWERRQVTGDTEHYFQKYKWFLKAKYKADNK*
Ga0098051_10142374	3300006924	Marine	MESQQTMKTSSFRRFCIENWYSYKDEVEAWEKRQVKGKEEEYFKKYKWFLKAKYKQEN*
Ga0075460_102589732	3300007234	Aqueous	MKSPFRAYCIEKWYEYKEEVFSWEKRVVEGPPEEYFKKYKWFLKAKYKQDNKIARQEENTSV*
Ga0099848_10683606	3300007541	Aqueous	MDFRQWVYEKWFEYRDEVEAWEHRRVTGNPEDYFHKWKWFLKAKYKQEKKNG*
Ga0102945_100078020	3300007609	Pond Water	MNHSPFRTYVYDKWYEYKDEVRAWEKREVEGSPEDYFQKYKWFLKAKYKQDDKQSGSI*
Ga0102945_10265351	3300007609	Pond Water	MNHSPFRTFVYDKWFEYKDEVREWEKREVEGSPEDYFQKYKWFLK
Ga0102957_13878622	3300009027	Pond Water	MPRNSEFRHYVYEKWFEYKDEVEQWERRQVTGSPEDYFNKWKWFLKAKYK
Ga0182046_14401473	3300016776	Salt Marsh	MNRSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQENKNG
Ga0182095_12150802	3300016791	Salt Marsh	MTKSPFRAYCIEKWYEYKEEVFSWEKRVVEGSPEDYFKKYKWFLKEKYKQEIRNG
Ga0182095_16285991	3300016791	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKK
Ga0182090_148118810	3300016797	Salt Marsh	SPFRAYCIEKWYEYKEEVFSWEKRVVEGSPEDYFKKYKWFLKEKYKQEIRNG
Ga0180120_102218722	3300017697	Freshwater To Marine Saline Gradient	MSDDMFKLPEISDFRRYCDEKWYEYKDEVEAWERKQVTGSPKDYFNKYKWFLKEKYKAEN
Ga0181552_100519974	3300017824	Salt Marsh	MEGQKTMTKSPFRAYCIEKWYEYKEEVFSWERRVVKGSPEDYFKKYKWFLKEKYKQEIRN
Ga0181552_101338742	3300017824	Salt Marsh	MNQSPFRTFVYDKWYEYKDEVRTWEKREVEGSPEDYFQKYKWFLKEKYKQENR
Ga0181552_101533094	3300017824	Salt Marsh	MDQSSFRTYCYDKWYEYKDEVLAWERKPVEGRPEEYFKKYKWFLKAKYKADNK
Ga0181552_103403213	3300017824	Salt Marsh	MIKSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQENKNG
Ga0181552_104539722	3300017824	Salt Marsh	MIRSPFRAFVYDKWYEYKDEVRMWEKREVEGNPEDYFQKYKWFLKAKYKQENVNE
Ga0181552_105366082	3300017824	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKAKYKADNK
Ga0181584_100160824	3300017949	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKTKYKAENK
Ga0181584_100543893	3300017949	Salt Marsh	MESQITMIKSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQENKN
Ga0181584_102928463	3300017949	Salt Marsh	MEGQKTMTKSPFRAYCIEKWYEYKEEVFSWEKRVVEGSPEDYFKKYKWFLKEKYKQEIRN
Ga0181584_104454182	3300017949	Salt Marsh	MPKNSEFRHYVYEKWFEYKDEVEQWEHRQVTGSPEDYFNKWKWFLRAKYKADNK
Ga0181607_1000631510	3300017950	Salt Marsh	MPKNSEFRHYVYEKWFEYKDEVEQWEHRQVTGNPQDYFNKWKWFLKTKYKEETQKDKYQ
Ga0181607_100093852	3300017950	Salt Marsh	MNHSPFRAYCIEKWYEYKDEVRAWEKRDVEGSPEDYFQKYKWFLKEKYKQENR
Ga0181607_1001680315	3300017950	Salt Marsh	MIRSHFRTYCYEKWYEYKEEVREWEKRVVEGPPEEYFKKYKWFLKAKYKQENVNE
Ga0181607_100399042	3300017950	Salt Marsh	MDQSSFRTYCYDKWYEYKDEVLAWERKPVEGRPEEYFKKYKWFLKTKYKAENR
Ga0181607_101179656	3300017950	Salt Marsh	MESQITMIKSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQEN
Ga0181607_101635863	3300017950	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKNPVEGPPDEYFKKYKWFLKAKYKSESINNVQT
Ga0181607_103083912	3300017950	Salt Marsh	DKWYEYKDEVLAWERKPVEGRPEEYFKKYKWFLKAKYKADNK
Ga0181607_103103111	3300017950	Salt Marsh	MEGQETMNRSPFRAYCIEKWYEYKEEVFSWEKRVVEGSPEDYFKKYKWFLKEKYKQEIRN
Ga0181580_101759424	3300017956	Salt Marsh	MIKSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQENNNG
Ga0181580_104551352	3300017956	Salt Marsh	VYDKWYEYKDEVRAWEKREVEGSPEDYFQKYKWFLKEKYKQENR
Ga0181590_102173054	3300017967	Salt Marsh	MESQITMIKSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQENNN
Ga0181585_100588586	3300017969	Salt Marsh	MEGQKTMTKSPFRAYCIEKWYEYKEEVFSWKKRVVEGSPEDYFKKYKWFLKEKYKQEIRN
Ga0181569_106700791	3300017986	Salt Marsh	MIRSPFRAFVYDKWYEYKDEVRTWEKREVEGSPEDYFQKYKWFLKEKYKQENR
Ga0181600_102406693	3300018036	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKTKYKAE
Ga0181600_103524913	3300018036	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKTKY
Ga0181601_103928641	3300018041	Salt Marsh	QETMNRSPFRAYCIEKWYEYKEEVFSWEKRVVEGSPEDYFKKYKWFLKEKYKQEIRNG
Ga0181601_105428011	3300018041	Salt Marsh	SFRTYCYDKWYEYKDEVLAWERKPVEGRPEEYFKKYKWFLKAKYKADNK
Ga0181601_106048111	3300018041	Salt Marsh	SFRTYCYDKWYEYKDEVLAWERKPVEGRPEEYFKKYKWFLKTKYKAENR
Ga0181606_100335219	3300018048	Salt Marsh	MNHSPFRTYVYDKWYEYKDEVRAWEKREVEGSPEDYFQKYKWFLKAKYKQDDKQSGSI
Ga0181606_104981061	3300018048	Salt Marsh	MDQSSFRTYCYDKWYEYKDEVFAWEKKPVEGRPEEYFKKYKWFLKTKYKAENR
Ga0181561_101307112	3300018410	Salt Marsh	MDQSSFRTYCYDKWYEYKDEVFAWEKKPEEGRREEYFKKYKWFLKAKYKADNK
Ga0181561_104464713	3300018410	Salt Marsh	SPFRTFVYDKWYEYKDEVRTWEKREVEGSPEDYFQKYKWFLKAKYKQENVNE
Ga0181560_100197064	3300018413	Salt Marsh	MDQSSFRTYCYDKWYEYKDEVFAWEKKPVEGRPEEYFKKYKWFLKAKYKADNK
Ga0181560_103207002	3300018413	Salt Marsh	MTKSPFRAYCIEKWYEYKEEVFSWEKRVVEGPPEEYFKKYKWFLKAKYKQENVNE
Ga0181559_103952101	3300018415	Salt Marsh	MIKSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAK
Ga0181559_105936682	3300018415	Salt Marsh	MNHSPFRTFVYDKWFEYKDEVRTWEKREVEGSPEDYFQKYKWFLKEKYKQENR
Ga0181553_103645623	3300018416	Salt Marsh	MNHSPFRTFVYDKWYEYKDEVRAWEKREVEGSPEDYFQKYKWFLKEKYKQENR
Ga0181563_108338752	3300018420	Salt Marsh	MIKSPFRTFVYDKWFEYKDEVRTWEKREVEGSPEDYFQKYKWFLKEKYKQENR
Ga0181568_101382899	3300018428	Salt Marsh	MIRSPFRAFVYDKWYEYKDEIREWEKREVEGSPEDYFQKYKWFLKAKYKQEKVNE
Ga0181568_110337362	3300018428	Salt Marsh	MPDKSQFRHYVYEKWYEYKDEVEQWEHRQVTGSPKDYFNKWKWFLKAKYKADSK
Ga0181564_100476337	3300018876	Salt Marsh	MESQITMIKSPFRTYCYEKWYEYKDEVEQWEKRVVEGSPQDYFNKWKWFLKAKYKQDN
Ga0181562_102493114	3300019459	Salt Marsh	MNHSPFRTYVYDKWYEYKDEVRTWEKRDVEGSPEDYFQKYKWFLKEKYKQENR
Ga0181562_105255682	3300019459	Salt Marsh	MPKNSEFRHYVYEKWFEYKDEVEQWEHRQVTGSPQDYFNKWKWFLRAKYKADNK
Ga0181595_101776013	3300020053	Salt Marsh	MIRSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQENRDG
Ga0206125_100798814	3300020165	Seawater	MSDDMFKLPEISDFRRYCDVKWYEYKDEVEAWERKQVTGSPKDYFNKYKWFLKEKYKAEN
Ga0181602_100244321	3300020173	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLK
Ga0181602_103784522	3300020173	Salt Marsh	FRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKTKYKAENK
Ga0181596_102840561	3300020177	Salt Marsh	DIMDQSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKTKYKAENK
Ga0181596_103529121	3300020177	Salt Marsh	YEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQENRDG
Ga0181599_12240313	3300020178	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYF
Ga0181605_1002020710	3300020188	Salt Marsh	MNRSPFRAYCIEKWYEYKEEVFSWEKRVVEGSPEDYFKKYKWFLKEKYKQEIRNG
Ga0222717_1000018354	3300021957	Estuarine Water	MSDDMFKLPEISDFRRYCDEKWYEYKDEVESWERKQVTGSPKDYFNKYKWFLKEKYKAEN
Ga0222717_100466733	3300021957	Estuarine Water	MSNMDFRLWVYDKWFEYRDEVEAWEHRQVTGSPEDYFRKWKWFLKAKYKQEKQNG
Ga0222717_103809203	3300021957	Estuarine Water	MMKSPFRAYCIEKWYEYKEEVFNWEKRVVEGPPEEYFQKYKWFLKTKYKQENKNG
Ga0222718_104614492	3300021958	Estuarine Water	MMKSPFRAYCIEKWYEYKEEVFSWEKRVVEGPPEEYFKKYKWFLKAKYKQDNKIIGQEENTSV
Ga0222716_1000018423	3300021959	Estuarine Water	MDFRLWVYDKWFEYRDEVEAWEHRQVTGSPEDYFRKWKWFLKAKYKQEKQNG
Ga0222716_1000575310	3300021959	Estuarine Water	MNQSPFRAYCIEKWYEYKEEVFNWEKRVVEGPPEEYFQKYKWFLKTKYKQENKNG
Ga0222716_100127199	3300021959	Estuarine Water	MNKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKTKYKAENK
Ga0222716_106555362	3300021959	Estuarine Water	MMKSPFRAYCIEKWYEYKEEVFSWEKRVVEGLPEEYFKKYKWFLKAKYKQDNKIIGQEENTSV
Ga0222715_1000148023	3300021960	Estuarine Water	MPKKSAFRLYVYEKWFEYKDEVEQWERRQVTGSPEDYFNKWKWFLKAKYKADNK
Ga0222715_101220193	3300021960	Estuarine Water	MNRSHFRTYCYEKWYEYKEEVREWEKRVVEGPPEEYFRKYKWFLKAKYKQDNKIVGQEENTSV
Ga0222715_103517073	3300021960	Estuarine Water	MNRSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQDGKQSESI
Ga0222713_107471232	3300021962	Estuarine Water	MNKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKTKYKAENKXSNYGLNSIVLK
Ga0222719_101382833	3300021964	Estuarine Water	MNHSPFRTFVYDKWFEYKDEVRAWEKREVEGSPEDYFQKYKWFLKEKYKQENR
Ga0222719_101695615	3300021964	Estuarine Water	MDFRQWVYEKWFEYRDEVEAWEHRQVTGSPEDYFNKWKWFLKAKYKQEKKNG
Ga0222719_103719831	3300021964	Estuarine Water	PFRAYCIEKWYEYKDEVRAWEKRDVEGSPEDYFQKYKWFLKEKYKQENR
Ga0196905_10885114	3300022198	Aqueous	MEGQKTMTKSPFRTYCYEKWYEYKDEVEQWERRQVTGSPQDYFNKWKWFLKAKYKQENRD
Ga0222633_10083096	3300022847	Saline Water	SKFRQWITEKWFEYKDEVEQWEKREVEGTPQEYFNKYKWFLKAKYKQETQL
Ga0255775_12636561	3300022907	Salt Marsh	NHSPFRTYVYDKWYEYKDEVRTWEKRDVEGSPEDYFQKYKWFLKAKYKQENVNE
Ga0255753_12583811	3300022926	Salt Marsh	CYDKWYEYKDEVLAWERKPVEGRPEEYFKKYKWFLKAKYKADNK
Ga0255769_100220001	3300022927	Salt Marsh	MNRSPFRAYCIEKWYEYKEEVFSWEKRVVEGSPEDYFKKYKWFLK
Ga0255769_101625483	3300022927	Salt Marsh	MHKSSFRAYCYEKWYEYKDEVLTWEKKPVEGPPDEYFKKYKWFLKT
Ga0255763_11861411	3300023273	Salt Marsh	MEGQETMNRSPFRAYCIEKWYEYKDEVRAWEKRDVEGSPEDYFQKYKWFL
Ga0228603_10598912	3300024183	Seawater	MKASSFRRFCIESWYSYKDEVEAWEKRQVRGKEEEYFKKYKWFLKAKYKQEN
Ga0228669_10560221	3300024185	Seawater	MKTSSFRRFCIESWYSYKDEVEAWEKRQVRGKEEEYFKKYKWFLKAKYKQEN
Ga0228660_10157553	3300024291	Seawater	MKTSSFRRFCIESWYSYKDEVEAWEKRQVKGKEEEYFKKYKWFLKAKYKQEN
Ga0208298_10097533	3300025084	Marine	MESQQTMKTSSFRRFCIENWYSYKDEVEAWEKRQVKGKEEEYFKKYKWFLKAKYKQEN
Ga0208792_10325923	3300025085	Marine	MKTSSFRRFCIENWYSYKDEVEAWEKRQVKGKEEEYFKKYKWFLKAKYKQEN
Ga0209953_10274211	3300026097	Pond Water	MNHSPFRTYVYDKWYEYKDEVRAWEKREVEGSPEDYFQKYKWFL
Ga0209953_10350651	3300026097	Pond Water	MNHSPFRTFVYDKWFEYKDEVREWEKREVEGSPEDYFQKYKWFLKEKYKQEN
Ga0228648_10767412	3300028126	Seawater	MKASSFRRFCIESWYSYKDEVEAWEKRQVKGKEEEYFKKYKWFLKAKYKQEN
Ga0302122_102113753	3300031675	Marine	EFRQWITEKWFEYKDEVEQWEKREVVGTPQEYFNKWKWFLKAKYKQETQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097117

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences