Metagenome / Metatranscriptome Family F097054

Basic Information
Family ID	F097054
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	85 residues
Representative Sequence	PLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG
Number of Associated Samples	80
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	No

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (47.115 % of family members)
Environment Ontology (ENVO)	Unclassified (87.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (89.423 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.25% β-sheet: 17.50% Coil/Unstructured: 51.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00990	GGDEF	47.12
PF01914	MarC	35.58
PF03454	MoeA_C	10.58
PF03205	MobB	1.92
PF05187	ETF_QO	0.96
PF00478	IMPDH	0.96
PF02634	FdhD-NarQ	0.96
PF13380	CoA_binding_2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	35.58
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	10.58
COG1763	Molybdopterin-guanine dinucleotide biosynthesis protein	Coenzyme transport and metabolism [H]	1.92
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.96
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	0.96
COG2440	Ferredoxin-like protein FixX	Energy production and conversion [C]	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.08%
Loam	Environmental → Terrestrial → Soil → Loam	1.92%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	67.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	47.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	20.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	20.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10541011	3300002557	Grasslands Soil	QALRQASQLTGMPLTVSGGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ*
JGI25383J37093_100731193	3300002560	Grasslands Soil	EAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPMPPPLRRL*
JGI25384J37096_100403884	3300002561	Grasslands Soil	GGVVTCVQPAESLEAVISAADRLLXGAKDAGNDTFWCXVIAPQPLEAFEPARLRRPFRLPPGFDMPMPPPLRRL*
JGI25382J37095_102516421	3300002562	Grasslands Soil	KLQQALRHTSQVTGLPLTVSGGVVTCLQPAESLETVIGTADQVLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYGR*
Ga0066674_101937272	3300005166	Soil	IRKLQEALRHTSQVTGLPLTVSGGVVTCLQPAESLETVIGTADQLLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYGRWG*
Ga0066672_100325411	3300005167	Soil	CLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIVPQPLEGFEPTRLRRAYRVPPGFDMPMPPPRDRPH*
Ga0066672_101306743	3300005167	Soil	GSQVTGLPLTVSGGVVTCLPPAESLEAVIGTADQLLLGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQFGQRG*
Ga0066677_102498361	3300005171	Soil	CLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR*
Ga0066683_102305091	3300005172	Soil	TVSGGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ*
Ga0066679_101966691	3300005176	Soil	LQELAEETGLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDSPG*
Ga0066690_100116527	3300005177	Soil	QQTLQALSDETDLPLTVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIVPQPLEGFEPTRLRRAYRVPPGFDMPMPPPRDRPH*
Ga0066690_104627051	3300005177	Soil	AESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG*
Ga0066684_106712431	3300005179	Soil	TGMPLTVSGGVVTCLSPAESLETVMGTANQLLHGAQSTGRDTFWSEVVAPQPLEGFQPARLRRPWRLPPSFDVPMPPQYGERG*
Ga0066684_108528812	3300005179	Soil	ETALPLSISGGVVTCLQPAESLEAIIGAADRLLTGPKGAGNDTVWCEVIAPQPLEGFEPARLRRPFRLPPGFDMPMPPPLRRS*
Ga0066678_109796691	3300005181	Soil	TCVQPAESLEAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPPPLRRL*
Ga0066676_102365141	3300005186	Soil	PLTVSGGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ*
Ga0066676_111444632	3300005186	Soil	QPAESLEAVIGAADRLLAGAKSVGDDTIWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPMPPLLRPQRDG*
Ga0066675_100995504	3300005187	Soil	TVIRKLQQSLRDASRETALPLCISGGVVTCVQPAESLEAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPPPLRRL*
Ga0066675_111402551	3300005187	Soil	KKLQQTLQALSDETDLPLTVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIVPQPVEAFEPTRLRRANRAPPGFDVPMPPPRDRPF*
Ga0066689_100830171	3300005447	Soil	RKLQEALRHASRVTGMPLTVSGGVVTCLQPADSLETAIGTADRLLYGARHAGTDSFWFEVVAPQPLEAFEPARLRRPWRLPPAFDLSMPSPQDRRRG*
Ga0066681_100739564	3300005451	Soil	LQELAEETGLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG*
Ga0066687_102183421	3300005454	Soil	CLQPAESLEAAIGAADRLLHGAKAAGRDSFWSEVIVPQPLEGFEPTRLRRAYRVPPGFDMPMPPPRDRPR*
Ga0066687_103573961	3300005454	Soil	PEAGPEAAGAAVQKLQQTLQQLAEETGLPLTVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR*
Ga0070706_1007891492	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG*
Ga0066692_101542181	3300005555	Soil	LPEAGSEAAGAVIHKLQDATREASRETALPLSISGGVVTCLPPAESLDAAVSAADRLLSGAKGAGPDTIWTEVIVPQPIEGFEPMRLRRALRQPPAFELPMPPPFSRRHRD*
Ga0066692_104990831	3300005555	Soil	EAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG*
Ga0066698_109262452	3300005558	Soil	DTVVRKLQQSLRDASHETALPLSISGGVVTSVQPAESLEAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRFPPGFDLPMPPPLRRL*
Ga0066670_101771443	3300005560	Soil	LTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAVGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPSRDRPH*
Ga0066703_104916441	3300005568	Soil	LEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDSPG*
Ga0066694_100284724	3300005574	Soil	GSQVTGLPLTVSGGVVTCLPPAESLEAVIGTADQLLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQFGRWG*
Ga0066702_106987802	3300005575	Soil	CLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDSPG*
Ga0066691_101082383	3300005586	Soil	IHKLQDATREASRETALPLSISGGVVTCLPPAESLDAAVSAADRLLSGAKGAGPDTIWTEVIVPQPIEGFEPMRLRRALRQPPAFELPMPPPFSRRHRD*
Ga0066654_100681523	3300005587	Soil	GVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ*
Ga0066706_102825731	3300005598	Soil	TGMPLTVSGGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ*
Ga0066706_103654611	3300005598	Soil	PLTVSGGVVTCLPPADSLEMAIGTADRLLYGARHAGKDSFWFEVVSPQPLEAFEPARLRRPWRLPPTFDLSMPPPQYRRRG*
Ga0066696_100816064	3300006032	Soil	LAEETGLPLTVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR*
Ga0066656_104122451	3300006034	Soil	SGGVVTCLQPAESLETVIGTADQLLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYGRWG*
Ga0066652_1001290621	3300006046	Soil	ESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG*
Ga0066653_102367642	3300006791	Soil	LPEAGVDAASAVIRKLQEALRHGSLVTGLPLTVSGGVVTCLPPAESLEAVIGTADQLLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQFGRWG*
Ga0066665_104401281	3300006796	Soil	LPLSISGGVVTCLQPAESLEAIIGAADRLLTGAKGAGNDTVWCEVIAPQPLEGFEPARLRRPFRLPPGFDMPMPPPLRRS*
Ga0066659_102695673	3300006797	Soil	QPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIVPQPLEGFEPTRLRRAYRVPPGFDMPMPPPRDRPH*
Ga0066659_104368271	3300006797	Soil	LPLTVSGGVVTCLQPAESLEGAIGAADRLLHGAKAAGRDTFWSEAIMPQPVEGFEPTRLRRAYRVPPGFDMPMPPPRDSPG*
Ga0066660_100395001	3300006800	Soil	AIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR
Ga0066660_100562021	3300006800	Soil	AGAVIRKLQQALRQASQVTGMPLTVSGGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ*
Ga0079221_101169411	3300006804	Agricultural Soil	YKLQSATREASRETALPLSVSGGVVTCLQPAESLDAVVSAADRLLSGAKGAGPDTIWTEVIVPQPLEGFEPMRLRRALRQPPSFDLPMPPPFSRSHHD*
Ga0066710_1016860053	3300009012	Grasslands Soil	GAADRLLHGAKAAGRDTFWSEVIVPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR
Ga0066710_1036175192	3300009012	Grasslands Soil	VLLPEASPEAADTVIRKLQQSLRDASRETALPLCISGGVVTCVQPAESLEAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPPPLRRL
Ga0066709_1036196472	3300009137	Grasslands Soil	LLLPEAGSDAASAVIRKLQQALRDASQATGLPLTVSGGVVTCLPPADSLEMAIGTADRLLYGARHAGKDSFWFEVVSPQPLEAFEPARLRRPWRLPPTFDLSMPPPQYRRRG*
Ga0066709_1046098522	3300009137	Grasslands Soil	LPEAGPDAADAVIRKLRQSVRDAADDTALPLSICGGVVTCLQPAESLEAVIGAADRLLSGAKGAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPMPPPLRRL*
Ga0134070_100532753	3300010301	Grasslands Soil	QPAESLEAVISAADRLLSGAKDAGNDTLWCEVIAPQPLEAFEPARLRRPFRLPPGFYMPPPLRRL*
Ga0134070_101487511	3300010301	Grasslands Soil	AGSDGASAVIRKLQQALRDASEATGLPLTVSGGVVTCLQPADSLETAIDTADRLLYGARHAGKDSFWFEVVAPQPLEAFEPARLRRPWRLPPTFDLSMPPPQYRRRG*
Ga0134088_100183745	3300010304	Grasslands Soil	SQATGLPLTVSGGVVTCLPPADSLETAIGTADRLLYGARHAGKDSFWFEVVSPQPLEAFEPARLRRPWRLPPTFDLSMPPPQYRRRG*
Ga0134084_101760362	3300010322	Grasslands Soil	LPEAGPEAAGAAVKKLQQTLLELAEETGLPLMVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR*
Ga0134065_101167782	3300010326	Grasslands Soil	SISGGVVTCLQPTESLEAVIGAADRLLSGAKGAGNDTIWCEVIAPQPLEAFEPARLRRPFRLPPGFDLPMPPPLRRL*
Ga0134080_100345673	3300010333	Grasslands Soil	VTCLQPADSLETAIDTADRLLYGARHAGKDSFWFEVVAPQPLEAFEPARLRRPWRLPPTFDLSMPPPQYRRRG*
Ga0134080_100696093	3300010333	Grasslands Soil	VSGGVVTCLQPAESLETVIGTADQLLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYGRWG*
Ga0134063_105594082	3300010335	Grasslands Soil	IGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR*
Ga0134071_100695293	3300010336	Grasslands Soil	GMPLTVSGGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ*
Ga0134062_100048161	3300010337	Grasslands Soil	RKLQQALRDASQATGLPLTVSGGVVTCLQPADSLETAIGAADRLLYGARHAGKDSFWFEVVAPQPLEAFEPARLRRPWRLPPTFDLSLPPPQYRRRG*
Ga0137364_100196354	3300012198	Vadose Zone Soil	VRKLQHTLQELAEETGLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG*
Ga0137364_100726301	3300012198	Vadose Zone Soil	TGLPLTVSGGVVTSLQPAESLETVIGTADQLLQGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYGRWG*
Ga0137365_110199491	3300012201	Vadose Zone Soil	IGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDSPG*
Ga0137362_113159532	3300012205	Vadose Zone Soil	PEAGPEAADAVIRKLRQSLRDESHETALPLSISGGVVTCLQPAESLEAIIGAADRLLTGAKGAGNDTVWCEVIAPQPLEGFEPARLRRPFRLPPGFDMPMPPPLRRS*
Ga0137380_115918711	3300012206	Vadose Zone Soil	GGVVTCVQPAESLEAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPMPPLRRL*
Ga0137376_100253018	3300012208	Vadose Zone Soil	LQQSVRAASTETALPLSISGGVVTCLQPTESLEAVIGAADRLLSGAKGAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDLPMPPPLRRL*
Ga0137370_1000466810	3300012285	Vadose Zone Soil	LPEAGPEAAGAAVKKLQQTLQELAEETGLPLTVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR*
Ga0137387_110123951	3300012349	Vadose Zone Soil	VTCLQPAESLEAIIGAADRLLTGAKGAGNDTVWCEVIAPQPLEGFEPARLRRPFRLPPGFDMPMPPPLRRS*
Ga0137372_106614822	3300012350	Vadose Zone Soil	TCLQPTESLEVVIGAADRLLSGAKGAGNATIWCEVIAPQPLEAFEPARLRRPFRLPPGFDLPMPPPLRRL*
Ga0134052_10882511	3300012393	Grasslands Soil	SDAASAVIRKLQQALRDASQATGLPLTVSGGVVTCLQPADSLETAIGAADRLLYGARHAGKDSFWFEVVAPQPLEAFEPARLRRPWRLPPTFDLSMPPPQYRRRG*
Ga0137419_101108854	3300012925	Vadose Zone Soil	PLSISGGVVTCLQPAESLEAVISAADRLLTGAKGAGTDTIWCEVIAPQPLEGFEPARMRRPFRLPPGFDLPIPPLLRRQGDG*
Ga0134077_105114791	3300012972	Grasslands Soil	GSDAASAVIRKLQQALRDASQATGLPLTVSGGVVTCLQPADSLETAIGAADRLLYGARHAGKDSFWFEVVAPQPLEAFEPARLRRPWRLPPTFDLSLPPPQYRRRG*
Ga0134110_100524493	3300012975	Grasslands Soil	TGLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDSPG*
Ga0134110_102239921	3300012975	Grasslands Soil	PEAGPEAAGAAGKKLQQTLQALSDETDLPLTVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDSFWSEVIVPQPLEGFEPTRLRRAYRVPPGFEMPMPPPRDRPH*
Ga0134076_102114432	3300012976	Grasslands Soil	DSLEMAIGTADRLLYGARHAGKDSFWFEVVSPQPLEAFEPARLRRPWRLPPTFDLSMPPPQYRRRG*
Ga0134076_103127741	3300012976	Grasslands Soil	ELAEETGLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIVPQPIEGFEPTRLRRAYRVPPGFDLPMPPPRDRPR*
Ga0134081_103352072	3300014150	Grasslands Soil	EAGSDAASAVIRKLQQALRDASQATGLPLTVSGGVVTCLPPADSLEMAIGTADRLLYGARHAGKDSFWFEVVSPQPLEAFEPARLRRPWRLPPTFDLSMPPPQYRRRG*
Ga0134075_102438442	3300014154	Grasslands Soil	CLQPAESLEAVIGAADRLLSGAKGAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPMPPPLRRL*
Ga0134075_104135181	3300014154	Grasslands Soil	NKLQQTLQELAEATGLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIVPQPIEGFEPTRLRRAYRVPPGFDLPMPPPRDRPR*
Ga0134112_100049907	3300017656	Grasslands Soil	GSDAASAVIRKLQQALRDASQATGLPLTVSGGVVTCLQPADSLETAIGAADRLLYGARHAGKDSFWFEVVAPQPLEAFEPARLRRPWRLPPTFDLSLPPPQYRRRG
Ga0134083_100053976	3300017659	Grasslands Soil	DSLETAIGTADRLLYGARHAGTDSFWFEVVAPQPLEAFEPARLRRPWRLPPAFDLSMPSPQDRRRG
Ga0066655_104309231	3300018431	Grasslands Soil	SGGVVTCLQPAESLETVIGTADQLLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYGRWG
Ga0066655_110882381	3300018431	Grasslands Soil	SAPLIRKRQQSLRAASRETALPLCISGGVVTCVQPAESLEAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPPPLRRL
Ga0066667_100986441	3300018433	Grasslands Soil	GPEAAGAAVRKLQHTLQELAEETGLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDSPG
Ga0066667_116498452	3300018433	Grasslands Soil	EAGSDAASAVIRKLQQALRDASQATGLPLTVSGGVVTCLQPADSLETAIGAADRLLYGARHAGKDSFWFEVVAPQPLEAFEPARLRRPWRLPPTFDLSLPPPQYRRRG
Ga0066667_121486591	3300018433	Grasslands Soil	TLQELAEETGLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDRFWSEVIVREPLEDFESRRVRRAYRVPPGFDMPMPPPRDRPH
Ga0066662_122652321	3300018468	Grasslands Soil	VTGLPLTVSGGVVTCLQPAESLETVIGTADQLLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYEQQG
Ga0066669_105016911	3300018482	Grasslands Soil	PAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ
Ga0209350_10253003	3300026277	Grasslands Soil	SLEAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPPPLRR
Ga0209350_11546612	3300026277	Grasslands Soil	GVVTCLQPAESLEAIIGAADRLLTGAKGAGNDTVWCEVIAPQPLEGFEPARLRRPFRLPPGFDMPMPPPLRRS
Ga0209027_10639251	3300026300	Grasslands Soil	DAASAVIRKLQQALRHASQLTGLPLSVSGGVVTSLPPAESLETVIGTADQLLHGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYGRWG
Ga0209238_10086811	3300026301	Grasslands Soil	VVRKLQQSVRDESHATAMPLSISGGVVTCLQPAESLEAVIGAADRLLTGAKGAGNDTIWCEVIAPQPLEGFEPARLRRPFRLPPGFDMPIPPPLRRS
Ga0209238_10114915	3300026301	Grasslands Soil	TVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEAIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG
Ga0209238_10405331	3300026301	Grasslands Soil	SISGGVVTCLQPTESLEAVIGAADRLLSGAKGAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDLPMPPPLRRL
Ga0209688_10095061	3300026305	Soil	PEAAGAAVQKLQQTLQQLAEETGLPLTVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDLPMPPPLDRPR
Ga0209154_11710271	3300026317	Soil	GSQVTGLPLTVSGGVVTCLPPAESLEAVIGTADQLLLGAKSTGRDTFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQFGQRG
Ga0209470_10036711	3300026324	Soil	RQASQLTGMPLTVSGGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ
Ga0209152_103183322	3300026325	Soil	QALSDETDLPLTVCGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIVPQPLEGFEPTRLRRAYRVPPGFDMPMPPPRDRPH
Ga0209801_13252072	3300026326	Soil	TCVQPAESLEAVISAADRLLSGAKDAGNDTFWCEVIAPQPLEAFEPARLRRPFRLPPGFDMPPPLRRL
Ga0209377_10551083	3300026334	Soil	GLPLTVSGGVVTCLQPAESLEAAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPRDRPG
Ga0209804_10159631	3300026335	Soil	MPLTVSGGVVTSLQPAESLETVIGTADQLLHGAKSTGRDTFWSEIVAPQPLEGFEPARLRRPWRLPPSFDVPMPPQYGRWG
Ga0209059_10381201	3300026527	Soil	GGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ
Ga0209376_100047422	3300026540	Soil	VIRKLQQALRQASQLTGMPLTVSGGVVTCLQPAESLETVMGSADQLLHGAKSAGRDIFWSEVVAPQPLEGFEPARLRRPWRLPPSFDVPMPPHQ
Ga0209161_101066533	3300026548	Soil	IIGAADRLLTGAKGAGNDTVWCEVIAPQPLEGFEPARLRRPFRLPPGFDMPMPPPLRRS
Ga0209474_104751061	3300026550	Soil	PLTVSGGVVTCLQPAESLESAIGAADRLLHGAKAAGRDTFWSEVIMPQPIEGFEPTRLRRAYRVPPGFDMPMPPPLDRPR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097054

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences