Metagenome Family F097052

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097052
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	54 residues
Representative Sequence	GRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE
Number of Associated Samples	92
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.88 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (32.692 % of family members)
Environment Ontology (ENVO)	Unclassified (60.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.385 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.31% β-sheet: 0.00% Coil/Unstructured: 34.69%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00149	Metallophos	50.00
PF00990	GGDEF	8.65
PF01103	Omp85	1.92
PF00069	Pkinase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	80.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	73.08 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	7.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	61.54 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	61.54 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	2.88 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	61.54 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2.88 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	61.54 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.96 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	0.96 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	61.54 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	0.96 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.96 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10419687	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300002908\|JGI25382J43887_10327649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	656	Open in IMG/M
3300002909\|JGI25388J43891_1018759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1228	Open in IMG/M
3300002912\|JGI25386J43895_10086761	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	828	Open in IMG/M
3300002912\|JGI25386J43895_10106112	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300005166\|Ga0066674_10296768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300005167\|Ga0066672_10077989	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	1975	Open in IMG/M
3300005177\|Ga0066690_10758494	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	635	Open in IMG/M
3300005179\|Ga0066684_10499317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	817	Open in IMG/M
3300005180\|Ga0066685_10054822	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2569	Open in IMG/M
3300005181\|Ga0066678_10615526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300005181\|Ga0066678_10660808	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	696	Open in IMG/M
3300005186\|Ga0066676_10240161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1179	Open in IMG/M
3300005406\|Ga0070703_10018517	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2014	Open in IMG/M
3300005440\|Ga0070705_100257097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1229	Open in IMG/M
3300005444\|Ga0070694_101080900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	668	Open in IMG/M
3300005451\|Ga0066681_10202489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1188	Open in IMG/M
3300005468\|Ga0070707_101349238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	679	Open in IMG/M
3300005536\|Ga0070697_100615790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	955	Open in IMG/M
3300005545\|Ga0070695_100178142	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1504	Open in IMG/M
3300005546\|Ga0070696_100377930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1103	Open in IMG/M
3300005552\|Ga0066701_10254790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1085	Open in IMG/M
3300005556\|Ga0066707_10343414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	976	Open in IMG/M
3300005558\|Ga0066698_10655268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300005574\|Ga0066694_10121780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1228	Open in IMG/M
3300005586\|Ga0066691_10427224	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300006031\|Ga0066651_10423084	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	709	Open in IMG/M
3300006034\|Ga0066656_10207743	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1248	Open in IMG/M
3300006034\|Ga0066656_10227176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1195	Open in IMG/M
3300006791\|Ga0066653_10254596	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	894	Open in IMG/M
3300006794\|Ga0066658_10052026	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1764	Open in IMG/M
3300006797\|Ga0066659_11045522	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	682	Open in IMG/M
3300006903\|Ga0075426_10293068	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1189	Open in IMG/M
3300006914\|Ga0075436_101013474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	623	Open in IMG/M
3300006954\|Ga0079219_12462035	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300007076\|Ga0075435_100098469	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2421	Open in IMG/M
3300009012\|Ga0066710_102234362	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	798	Open in IMG/M
3300009088\|Ga0099830_10311678	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1258	Open in IMG/M
3300009088\|Ga0099830_11365235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	589	Open in IMG/M
3300009137\|Ga0066709_101103558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1166	Open in IMG/M
3300010304\|Ga0134088_10560861	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300010322\|Ga0134084_10015749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1973	Open in IMG/M
3300010323\|Ga0134086_10035578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1654	Open in IMG/M
3300010325\|Ga0134064_10031132	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1567	Open in IMG/M
3300010326\|Ga0134065_10098994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	966	Open in IMG/M
3300010326\|Ga0134065_10214084	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	703	Open in IMG/M
3300010333\|Ga0134080_10067807	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1427	Open in IMG/M
3300010335\|Ga0134063_10021593	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2666	Open in IMG/M
3300010335\|Ga0134063_10103835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1291	Open in IMG/M
3300010364\|Ga0134066_10045420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1106	Open in IMG/M
3300011120\|Ga0150983_11014690	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300012200\|Ga0137382_11174449	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300012203\|Ga0137399_10149011	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300012207\|Ga0137381_11357692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	603	Open in IMG/M
3300012210\|Ga0137378_11188104	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	678	Open in IMG/M
3300012211\|Ga0137377_11351295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	642	Open in IMG/M
3300012285\|Ga0137370_10152687	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1336	Open in IMG/M
3300012285\|Ga0137370_10233154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1087	Open in IMG/M
3300012355\|Ga0137369_11056754	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012362\|Ga0137361_10755658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	886	Open in IMG/M
3300012363\|Ga0137390_10491662	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1201	Open in IMG/M
3300012918\|Ga0137396_10049842	All Organisms → cellular organisms → Bacteria	2867	Open in IMG/M
3300012918\|Ga0137396_10696492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	749	Open in IMG/M
3300012925\|Ga0137419_10687836	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	829	Open in IMG/M
3300012972\|Ga0134077_10188910	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300012972\|Ga0134077_10188944	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	835	Open in IMG/M
3300012976\|Ga0134076_10051865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1549	Open in IMG/M
3300014154\|Ga0134075_10015514	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300014154\|Ga0134075_10056128	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300014157\|Ga0134078_10184518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	841	Open in IMG/M
3300015053\|Ga0137405_1338424	All Organisms → cellular organisms → Bacteria	6386	Open in IMG/M
3300015054\|Ga0137420_1445720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1057	Open in IMG/M
3300015264\|Ga0137403_10325898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1427	Open in IMG/M
3300018433\|Ga0066667_10381236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1133	Open in IMG/M
3300018433\|Ga0066667_11854009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300019866\|Ga0193756_1027043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	806	Open in IMG/M
3300021086\|Ga0179596_10324392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	770	Open in IMG/M
3300025922\|Ga0207646_11045576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	720	Open in IMG/M
3300026301\|Ga0209238_1152344	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300026310\|Ga0209239_1310385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300026313\|Ga0209761_1047384	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300026313\|Ga0209761_1109338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1365	Open in IMG/M
3300026314\|Ga0209268_1135041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300026315\|Ga0209686_1039311	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300026323\|Ga0209472_1030362	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300026324\|Ga0209470_1001339	All Organisms → cellular organisms → Bacteria	18342	Open in IMG/M
3300026326\|Ga0209801_1178972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	872	Open in IMG/M
3300026330\|Ga0209473_1013114	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4035	Open in IMG/M
3300026331\|Ga0209267_1059807	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300026332\|Ga0209803_1198583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300026335\|Ga0209804_1031774	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
3300026343\|Ga0209159_1016845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4204	Open in IMG/M
3300026530\|Ga0209807_1137161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300026537\|Ga0209157_1391558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300026538\|Ga0209056_10160939	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300026542\|Ga0209805_1367287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300026551\|Ga0209648_10528273	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	668	Open in IMG/M
3300026557\|Ga0179587_10438388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300027669\|Ga0208981_1056751	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300027671\|Ga0209588_1231839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	568	Open in IMG/M
3300027748\|Ga0209689_1229123	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	788	Open in IMG/M
3300027846\|Ga0209180_10608279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	603	Open in IMG/M
3300031753\|Ga0307477_10655303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300031820\|Ga0307473_10593279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	763	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.12%
Host-Associated	Host-Associated	2.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.12%
Plants	Host-Associated → Plants	2.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.58%
Loam	Environmental → Terrestrial → Soil → Loam	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	45.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	32.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104196871	3300001661	Forest Soil	TLEYLLRLKDEYPAAAFLQTLKSRGAPPIDAAEYRSLRGLKPGKDD*
JGI25382J43887_103276491	3300002908	Grasslands Soil	RSRLAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE*
JGI25388J43891_10187591	3300002909	Grasslands Soil	VLQTQATRWQLAEILAAESGRSTFEYLLRLKDEYLAGTLLDTLKSRGAPPIDAAEYRSLRGLKPAKDD*
JGI25386J43895_100867612	3300002912	Grasslands Soil	AERGRSSLEYLLRLKDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE*
JGI25386J43895_101061121	3300002912	Grasslands Soil	STLEYLIRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKEE*
Ga0066674_102967682	3300005166	Soil	LAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAVEYRSLRGLKKRKEE*
Ga0066672_100779891	3300005167	Soil	VQARRSRLAEIVPAERGRSTLEYLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE*
Ga0066690_107584942	3300005177	Soil	AEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE*
Ga0066684_104993172	3300005179	Soil	ERGRSTLEYLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE*
Ga0066685_100548221	3300005180	Soil	PAGAQRIVEELLQEQAVRWRLAEINPAGSGRSTLEFLFRLKEGLLPASLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0066678_106155262	3300005181	Soil	WRLAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE
Ga0066678_106608081	3300005181	Soil	EAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKEE*
Ga0066676_102401611	3300005186	Soil	LFRLKEGLLPASLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0070703_100185173	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	QLQAQRWRLAEIVPAEQGRSSLEYLIRLRDEFLPATVLDALKGRGSPPIDAAEYRSLRGLKKR*
Ga0070705_1002570972	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LQLQAQRWRLAEIVPAEQGRSSLEYLIRLRDEFLPATVLDALKGRGSPPIDAAEYRSLRGLKKR*
Ga0070694_1010809001	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ELLQLQAQRWRLAEIVPAEQGRSSLEYLIRLRDEFLPATLLGALNGRGSPPIDAAEYRSLRGLKKR*
Ga0066681_102024892	3300005451	Soil	EVQARRSRLAEIVPAERGRSTLEYLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE*
Ga0070707_1013492381	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EELLQLQAQRWRLAEIVPAEQGRSSLEYLIRLRDEFLPATLLGALNGRGSPPIDAAEYRSLRGLKKR*
Ga0070697_1006157901	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LRLKEGVLAASLLHALKSRGTPPIDAAEYRSLRGLKRGKGE*
Ga0070695_1001781421	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LEYLIRLRDEFLPATLLGALNGRGSPPIDAAEYRSLRGLKKR*
Ga0070696_1003779301	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RVVEELLQLQAQRWRLAEIVPAEQGRSSLEYLIRLRDEFLPATVLDALKGRGSPPIDAAEYRSLRGLKKR*
Ga0066701_102547902	3300005552	Soil	RDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKHKGE*
Ga0066707_103434142	3300005556	Soil	WRLAEIVPAEQGRSTLEYLLRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGMKKHKDT
Ga0066698_106552682	3300005558	Soil	LEIQARRWRLAEIVPAERGRSSLEYLLRLRDQFLPATLLDALKGRGSPPVDAAEYRSLRGLKKRKEE*
Ga0066694_101217802	3300005574	Soil	FRLKEGLLPGSLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0066691_104272241	3300005586	Soil	ETQAKRWQLAEILSVEGGRSTFEYLLRLKEEYLAATLLDTLKSRGAPPIDAAEYRSLRGLKPAKDD*
Ga0066651_104230842	3300006031	Soil	GRSTLEYLLRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKHKGE*
Ga0066656_102077431	3300006034	Soil	STLEYLLRLRDEFLPATLLDALKGRGSPPVDAAEYRSLRGLKKR*
Ga0066656_102271761	3300006034	Soil	KEGLLPGSLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0066653_102545962	3300006791	Soil	AGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKEE*
Ga0066658_100520261	3300006794	Soil	LLEVQARRWRLAEIVPAEQGRSTLEYLLRLRDEFLPATLLDALKGRGSPPVDAAEYRSLRGLKKR*
Ga0066659_110455222	3300006797	Soil	EIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAVEYRSLRGLKKRKEE*
Ga0075426_102930681	3300006903	Populus Rhizosphere	EFLPATLLDALKGRGTPPIDAAEYRSLRGMKKRKEE*
Ga0075436_1010134742	3300006914	Populus Rhizosphere	YLLRLKEGILAAAVLNVLKSRGSPPIDAAEYRSLRGLKRGKGE*
Ga0079219_124620351	3300006954	Agricultural Soil	GRSTFEYLLRLKEEYLAATLLGTLRECGAPPIDAAEYRSLRGLKPGKDD*
Ga0075435_1000984693	3300007076	Populus Rhizosphere	GRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE*
Ga0066710_1022343622	3300009012	Grasslands Soil	EERLQLQARRWRRAEFVPAEQGRSTLEYLLRPRDEFLPATLLDALKGRGTPPIDAAEYRSLRGMKKHKDT
Ga0099830_103116781	3300009088	Vadose Zone Soil	EIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAVEYRSLRGLKKRKEE*
Ga0099830_113652352	3300009088	Vadose Zone Soil	LIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE*
Ga0066709_1011035581	3300009137	Grasslands Soil	RDQFLPATLLDALKGRGSPPVDAAEYRSLRGLKKRKEE*
Ga0134088_105608612	3300010304	Grasslands Soil	WRLAEINPAGSGRSTLEFLFRLKEGLLPGSLLEALKSRGSPPIDAAEYRSLRGLKKSKPE
Ga0134084_100157491	3300010322	Grasslands Soil	EQGRSTLEYLLRLRDEFLPATLLDALKGRGSPPVDAAEYRSLRGLKKR*
Ga0134086_100355783	3300010323	Grasslands Soil	RVVEELLEVQARRWRLAEIVPAEQGRSSLEYLLRLRNEFLPTTLLDALKGHGTPPIDAAEYRSLRGLKKRKEE*
Ga0134064_100311321	3300010325	Grasslands Soil	ARRSRLAEIVPAERGRSTLEYLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE*
Ga0134065_100989942	3300010326	Grasslands Soil	STLEYLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE*
Ga0134065_102140842	3300010326	Grasslands Soil	LEFLFRLKEGLLPCSLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0134080_100678071	3300010333	Grasslands Soil	TLEYLIRLRDEFLPATLLDALKGRGTPPVDAVEYRSLRGLKKRKEE*
Ga0134063_100215933	3300010335	Grasslands Soil	RSTLEFLFRLKEGLLPGSLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0134063_101038351	3300010335	Grasslands Soil	RSTLEYLIRLRDEFLPATLLDALKGRGSPPVDAAEYRSLRGLKKRKEE*
Ga0134066_100454202	3300010364	Grasslands Soil	LAEINPAGSGRSTLEFLFRLKEGLLPASLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0150983_110146902	3300011120	Forest Soil	FLPATLLDALKVRGTPPIDAVEYRSLRGLKKRKEE*
Ga0137382_111744492	3300012200	Vadose Zone Soil	EIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKEE*
Ga0137399_101490111	3300012203	Vadose Zone Soil	LQVQARRWRLAEIVPAEQGRSTLEYLLRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKR*
Ga0137381_113576921	3300012207	Vadose Zone Soil	RRWRLAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKEE*
Ga0137378_111881042	3300012210	Vadose Zone Soil	RWRLAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAVEYRSLRGLKKRKEE*
Ga0137377_113512951	3300012211	Vadose Zone Soil	RLAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE*
Ga0137370_101526872	3300012285	Vadose Zone Soil	LEYLLRLRDEFLPATLLDALKGRGTPPIDAVEYRSLRGLKKRKGE*
Ga0137370_102331541	3300012285	Vadose Zone Soil	GRSTLEYLLRLRDEFLPATLLDALKGRGSPPVDAAEYRSLRGLKKR*
Ga0137369_110567542	3300012355	Vadose Zone Soil	DVLQTQTTRWQLAEILAAESGRSTLEYLLRLKDEYLAGTLLDTLKSRGAPPIDAAEYRSLRGLKPAKDD*
Ga0137361_107556582	3300012362	Vadose Zone Soil	LPATLLDALKGRGTPPIDAAEYRSLRGLKKHKGE*
Ga0137390_104916621	3300012363	Vadose Zone Soil	LAEIVPAEAGRSTLEYLIRLKDEFLPATLLDALKVRGTPPIDAVEYRSLRGLKKRKEE*
Ga0137396_100498423	3300012918	Vadose Zone Soil	AEQGRSSLEYLVRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKR*
Ga0137396_106964921	3300012918	Vadose Zone Soil	GRSTLEYLLRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKR*
Ga0137419_106878361	3300012925	Vadose Zone Soil	RSTLEYLVRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKH*
Ga0134077_101889101	3300012972	Grasslands Soil	ILPAGSGRSTLEYLLRLKEGILAASLLRALKSRGSPPIDAAEYRSLRGLKRGKGE*
Ga0134077_101889442	3300012972	Grasslands Soil	VTEQIVGASVEELLQEQAVRWRLAEINPAGSGRSTLEFLFRLKEGLLPASLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0134076_100518653	3300012976	Grasslands Soil	VCWRLAEINPAGSGRSTLEFLFRLKEGLLPASLLEALKSRGSPPIDAAEYRSLRGLKKSKPE*
Ga0134075_100155141	3300014154	Grasslands Soil	RRWRLAEIVPAEQGRSTLEYLLRLRDEFLPATLLDALKGRGSPPVDAAEYRSLRGLKKR*
Ga0134075_100561283	3300014154	Grasslands Soil	AEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKEE*
Ga0134078_101845182	3300014157	Grasslands Soil	LLDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE*
Ga0137405_13384246	3300015053	Vadose Zone Soil	MLLFTRPNRKPRIVVEELLELQARRWRLAEIVQAEQGRSSLEYLIRLRDEFLPGTLLDALKSRGTPPIDAAEYVRARLEERKEE*
Ga0137420_14457202	3300015054	Vadose Zone Soil	IVPAEQGRSSLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKDE*
Ga0137403_103258981	3300015264	Vadose Zone Soil	AQRVVEELLQVQARRWRLAEIVPAERGRSSLEYLLRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE*
Ga0066667_103812361	3300018433	Grasslands Soil	PEGGRSTFEYLLRLKEEFLAATLLDTLKSRGAPPIDAAEYRSLRGLKPGKDE
Ga0066667_118540092	3300018433	Grasslands Soil	LRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE
Ga0193756_10270431	3300019866	Soil	LAEIVPAEQGRSSLEYLIRLRDEFLPATLLDALKGRGSPPIDAAEYRSLRGLKKR
Ga0179596_103243921	3300021086	Vadose Zone Soil	LRQVQARRWRLAEIVPAEQGRSSLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE
Ga0207646_110455762	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PEAAQRVVEELLQLQAQRWRLAEIVPAEQGRSSLEYLIRLRDEFLPATVLDALKGRGSPPIDAAEYRSLRGLKKR
Ga0209238_11523442	3300026301	Grasslands Soil	KDEYLAGTLLDTLKSRGAPPIDAAEYRSLRGLKPPKDD
Ga0209239_13103851	3300026310	Grasslands Soil	RDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE
Ga0209761_10473841	3300026313	Grasslands Soil	AEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKEE
Ga0209761_11093382	3300026313	Grasslands Soil	AEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAVEYRSLRGLKKRKEE
Ga0209268_11350411	3300026314	Soil	EFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKEE
Ga0209686_10393111	3300026315	Soil	DGQARRSRLAEIVPAERGRSTLEYLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE
Ga0209472_10303623	3300026323	Soil	RLAEIVPAEQGRSTLEYLLRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKHKGE
Ga0209470_10013391	3300026324	Soil	FLFRLKEGLLPGSLLEALKSRGSPPIDAAEYRSLRGLKKSKPE
Ga0209801_11789721	3300026326	Soil	YLLRLRDEFLPATLLDALKGRGSPPVDAAEYRSLRGLKKR
Ga0209473_10131144	3300026330	Soil	STLEYLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE
Ga0209267_10598073	3300026331	Soil	RWRLAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKE
Ga0209803_11985831	3300026332	Soil	GRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE
Ga0209804_10317741	3300026335	Soil	YLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE
Ga0209159_10168451	3300026343	Soil	GAQRIVEELLQEQAVRWRLAEINPAGSGRSTLEFLFRLKEGLLPASLLEALKSRGSPPIDAAEYRSLRGLKKSKPE
Ga0209807_11371612	3300026530	Soil	RLAEIVPAERGRSTLEYLVRLRDEFLPATLLEALKARGSPPVDAVEYRSLRGMKKRKEE
Ga0209157_13915582	3300026537	Soil	LLPASLLEALKSRGSPPIDAAEYRSLRGLKKSKPE
Ga0209056_101609393	3300026538	Soil	QARRWRLAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE
Ga0209805_13672871	3300026542	Soil	VPAEQGRSTLEYLLRLRDEFLPATLLDALKGRGSPPVDAAEYRSLRGLKKR
Ga0209648_105282731	3300026551	Grasslands Soil	LEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE
Ga0179587_104383881	3300026557	Vadose Zone Soil	ELLQVQARRWRLAEIVPAEQGRSSLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE
Ga0208981_10567511	3300027669	Forest Soil	TLEYLLRLKDEYPAAAFLQTLKSRGAPPIDAAEYRSLRGLKPGKDD
Ga0209588_12318392	3300027671	Vadose Zone Soil	LAEIVPAEQGRSSLEYLIRLRDEFLPATLLDALKGRGTPPIDAAEYRSLRGLKKRKEE
Ga0209689_12291232	3300027748	Soil	QARRWRLAEIVPAEAGRSTLEYLIRLRDEFLPATLLDALKGRGTPPVDAVEYRSLRGLKKRKEE
Ga0209180_106082791	3300027846	Vadose Zone Soil	EYLIRLRDEFLPATLLDALKGRGSPPIDAAEYRSLRGLKKR
Ga0307477_106553031	3300031753	Hardwood Forest Soil	GRSTLEYLIRLKDEFLPATLLDALKVRGTPPIDAVEYRSLRGLKKRKEE
Ga0307473_105932792	3300031820	Hardwood Forest Soil	VPAEQGRSSLEYLVRLRDEFLPATLLDALKGRGTPPVDAAEYRSLRGLKKRKED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097052

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences