Metagenome Family F097049

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097049
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	87 residues
Representative Sequence	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAI
Number of Associated Samples	75
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	99.03 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	75.96 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (84.615 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (43.269 % of family members)
Environment Ontology (ENVO)	Unclassified (60.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.346 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.00% β-sheet: 0.00% Coil/Unstructured: 25.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02737	3HCDH_N	66.35
PF00725	3HCDH	19.23
PF04471	Mrr_cat	7.69
PF02163	Peptidase_M50	1.92
PF01192	RNA_pol_Rpb6	0.96
PF00583	Acetyltransf_1	0.96
PF02310	B12-binding	0.96
PF04126	Cyclophil_like	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	85.58
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	66.35
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	66.35
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	66.35
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	66.35
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	66.35
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	66.35
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Viruses	superkingdom	All Organisms → Viruses	1.92 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	84.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.85 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	2.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.85 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.92 %
Unclassified	root	N/A	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10560908	All Organisms → cellular organisms → Archaea	544	Open in IMG/M
3300002558\|JGI25385J37094_10038331	All Organisms → cellular organisms → Archaea	1660	Open in IMG/M
3300002908\|JGI25382J43887_10111461	All Organisms → cellular organisms → Archaea	1435	Open in IMG/M
3300002911\|JGI25390J43892_10055718	All Organisms → cellular organisms → Archaea	927	Open in IMG/M
3300002911\|JGI25390J43892_10055723	All Organisms → cellular organisms → Archaea	927	Open in IMG/M
3300002912\|JGI25386J43895_10032880	All Organisms → cellular organisms → Archaea	1526	Open in IMG/M
3300005166\|Ga0066674_10256841	All Organisms → cellular organisms → Archaea	827	Open in IMG/M
3300005167\|Ga0066672_10408342	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005171\|Ga0066677_10673830	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005174\|Ga0066680_10024720	All Organisms → cellular organisms → Archaea	3332	Open in IMG/M
3300005178\|Ga0066688_10474935	All Organisms → cellular organisms → Archaea	807	Open in IMG/M
3300005181\|Ga0066678_10070713	All Organisms → cellular organisms → Archaea	2042	Open in IMG/M
3300005181\|Ga0066678_10771059	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300005186\|Ga0066676_10523346	All Organisms → cellular organisms → Archaea	805	Open in IMG/M
3300005445\|Ga0070708_100574066	All Organisms → cellular organisms → Archaea	1063	Open in IMG/M
3300005446\|Ga0066686_10943862	All Organisms → cellular organisms → Archaea	564	Open in IMG/M
3300005450\|Ga0066682_10441365	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005450\|Ga0066682_10793966	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005451\|Ga0066681_10310469	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300005540\|Ga0066697_10026601	All Organisms → cellular organisms → Archaea	3181	Open in IMG/M
3300005540\|Ga0066697_10665493	All Organisms → cellular organisms → Archaea	572	Open in IMG/M
3300005553\|Ga0066695_10294250	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005553\|Ga0066695_10440532	All Organisms → cellular organisms → Archaea	804	Open in IMG/M
3300005553\|Ga0066695_10644703	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005556\|Ga0066707_10220988	All Organisms → cellular organisms → Archaea	1228	Open in IMG/M
3300005557\|Ga0066704_10017238	All Organisms → cellular organisms → Archaea	4181	Open in IMG/M
3300005557\|Ga0066704_10401525	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300005557\|Ga0066704_10738725	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300005559\|Ga0066700_10083039	All Organisms → cellular organisms → Archaea	2061	Open in IMG/M
3300005559\|Ga0066700_10432640	All Organisms → cellular organisms → Archaea	925	Open in IMG/M
3300005559\|Ga0066700_10441276	All Organisms → cellular organisms → Archaea	914	Open in IMG/M
3300005586\|Ga0066691_10244548	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300005598\|Ga0066706_11363070	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300006791\|Ga0066653_10302583	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300006796\|Ga0066665_10267898	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300006796\|Ga0066665_10645752	All Organisms → cellular organisms → Archaea	843	Open in IMG/M
3300006797\|Ga0066659_10086700	All Organisms → cellular organisms → Archaea	2093	Open in IMG/M
3300007258\|Ga0099793_10023945	All Organisms → cellular organisms → Archaea	2535	Open in IMG/M
3300007258\|Ga0099793_10406698	All Organisms → cellular organisms → Archaea	669	Open in IMG/M
3300009012\|Ga0066710_104680037	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300009038\|Ga0099829_10638758	All Organisms → cellular organisms → Archaea	885	Open in IMG/M
3300009090\|Ga0099827_10800105	All Organisms → cellular organisms → Archaea	816	Open in IMG/M
3300009137\|Ga0066709_103985363	All Organisms → cellular organisms → Archaea	537	Open in IMG/M
3300010336\|Ga0134071_10074063	All Organisms → cellular organisms → Archaea	1584	Open in IMG/M
3300010337\|Ga0134062_10018281	All Organisms → cellular organisms → Archaea	2654	Open in IMG/M
3300011270\|Ga0137391_10277100	All Organisms → cellular organisms → Archaea	1450	Open in IMG/M
3300011271\|Ga0137393_10993197	All Organisms → cellular organisms → Archaea	715	Open in IMG/M
3300012096\|Ga0137389_10664199	All Organisms → cellular organisms → Archaea	896	Open in IMG/M
3300012198\|Ga0137364_10081396	All Organisms → cellular organisms → Archaea	2240	Open in IMG/M
3300012198\|Ga0137364_10911303	All Organisms → cellular organisms → Archaea	665	Open in IMG/M
3300012199\|Ga0137383_10128945	All Organisms → cellular organisms → Archaea	1847	Open in IMG/M
3300012199\|Ga0137383_10545588	All Organisms → cellular organisms → Archaea	848	Open in IMG/M
3300012201\|Ga0137365_10443927	All Organisms → cellular organisms → Archaea	955	Open in IMG/M
3300012201\|Ga0137365_11106734	All Organisms → cellular organisms → Archaea	570	Open in IMG/M
3300012206\|Ga0137380_11559516	All Organisms → cellular organisms → Archaea	545	Open in IMG/M
3300012207\|Ga0137381_10497377	All Organisms → Viruses → Predicted Viral	1064	Open in IMG/M
3300012208\|Ga0137376_10981879	All Organisms → cellular organisms → Archaea	724	Open in IMG/M
3300012208\|Ga0137376_11767368	All Organisms → cellular organisms → Archaea	509	Open in IMG/M
3300012209\|Ga0137379_10082679	All Organisms → cellular organisms → Archaea	3089	Open in IMG/M
3300012209\|Ga0137379_10862712	All Organisms → cellular organisms → Archaea	810	Open in IMG/M
3300012210\|Ga0137378_10104289	All Organisms → cellular organisms → Archaea	2606	Open in IMG/M
3300012210\|Ga0137378_11254093	All Organisms → cellular organisms → Archaea	658	Open in IMG/M
3300012211\|Ga0137377_10871509	All Organisms → cellular organisms → Archaea	832	Open in IMG/M
3300012349\|Ga0137387_10314009	All Organisms → cellular organisms → Archaea	1134	Open in IMG/M
3300012349\|Ga0137387_10545483	All Organisms → cellular organisms → Archaea	841	Open in IMG/M
3300012349\|Ga0137387_10605451	All Organisms → cellular organisms → Archaea	794	Open in IMG/M
3300012357\|Ga0137384_10476962	All Organisms → cellular organisms → Archaea	1025	Open in IMG/M
3300012357\|Ga0137384_10713673	All Organisms → cellular organisms → Archaea	814	Open in IMG/M
3300012359\|Ga0137385_10297465	All Organisms → cellular organisms → Archaea	1389	Open in IMG/M
3300012363\|Ga0137390_10646195	All Organisms → cellular organisms → Archaea	1023	Open in IMG/M
3300012918\|Ga0137396_10394667	All Organisms → cellular organisms → Archaea	1025	Open in IMG/M
3300012972\|Ga0134077_10246915	All Organisms → cellular organisms → Archaea	738	Open in IMG/M
3300012972\|Ga0134077_10427419	All Organisms → cellular organisms → Archaea	576	Open in IMG/M
3300012972\|Ga0134077_10565340	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300012977\|Ga0134087_10062798	All Organisms → cellular organisms → Archaea	1490	Open in IMG/M
3300018431\|Ga0066655_11036509	All Organisms → cellular organisms → Archaea	569	Open in IMG/M
3300018482\|Ga0066669_10019604	All Organisms → cellular organisms → Archaea	3742	Open in IMG/M
3300021171\|Ga0210405_10384938	All Organisms → cellular organisms → Archaea	1105	Open in IMG/M
3300026298\|Ga0209236_1037024	All Organisms → cellular organisms → Archaea	2548	Open in IMG/M
3300026298\|Ga0209236_1058641	All Organisms → cellular organisms → Archaea	1880	Open in IMG/M
3300026317\|Ga0209154_1006419	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	5983	Open in IMG/M
3300026317\|Ga0209154_1013349	All Organisms → cellular organisms → Archaea	3955	Open in IMG/M
3300026324\|Ga0209470_1286356	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300026326\|Ga0209801_1338609	All Organisms → cellular organisms → Archaea	530	Open in IMG/M
3300026328\|Ga0209802_1041087	All Organisms → cellular organisms → Archaea	2353	Open in IMG/M
3300026332\|Ga0209803_1006432	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	6583	Open in IMG/M
3300026333\|Ga0209158_1003061	All Organisms → cellular organisms → Archaea	9891	Open in IMG/M
3300026333\|Ga0209158_1017962	All Organisms → cellular organisms → Archaea	3253	Open in IMG/M
3300026333\|Ga0209158_1081371	All Organisms → cellular organisms → Archaea	1262	Open in IMG/M
3300026334\|Ga0209377_1168095	All Organisms → cellular organisms → Archaea	801	Open in IMG/M
3300026343\|Ga0209159_1166545	All Organisms → cellular organisms → Archaea	817	Open in IMG/M
3300026371\|Ga0257179_1023270	All Organisms → cellular organisms → Archaea	728	Open in IMG/M
3300026499\|Ga0257181_1055626	All Organisms → cellular organisms → Archaea	663	Open in IMG/M
3300026524\|Ga0209690_1017273	All Organisms → cellular organisms → Archaea	3711	Open in IMG/M
3300026528\|Ga0209378_1235769	All Organisms → cellular organisms → Archaea	582	Open in IMG/M
3300026532\|Ga0209160_1090850	All Organisms → cellular organisms → Archaea	1576	Open in IMG/M
3300026542\|Ga0209805_1022016	All Organisms → cellular organisms → Archaea	3323	Open in IMG/M
3300026551\|Ga0209648_10039615	All Organisms → cellular organisms → Archaea	4079	Open in IMG/M
3300026552\|Ga0209577_10059036	All Organisms → cellular organisms → Archaea	3212	Open in IMG/M
3300027643\|Ga0209076_1000902	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	5694	Open in IMG/M
3300027643\|Ga0209076_1024039	All Organisms → cellular organisms → Archaea	1670	Open in IMG/M
3300027875\|Ga0209283_10323892	All Organisms → cellular organisms → Archaea	1014	Open in IMG/M
3300031962\|Ga0307479_11345936	All Organisms → cellular organisms → Archaea	674	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.12%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	54.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	43.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_105609082	3300001661	Forest Soil	MTTDETAILNEPSKRLTEVILRGDDQDAARIAGEIAGGKTQTNELVDAISETMNIVSDLHEVDRYSVQQVENCERAAESALKAIRPGLKVEQRR
JGI25385J37094_100383313	3300002558	Grasslands Soil	MTTDDTPTIDEPSKRLTEMILKGEDQESARIATEIVGGRPETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIKVEQ
JGI25382J43887_101114613	3300002908	Grasslands Soil	LTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIKVEQRRISGKVMVTEGRLGRKTGKGFYDY*
JGI25390J43892_100557182	3300002911	Grasslands Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDPH
JGI25390J43892_100557232	3300002911	Grasslands Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDPH
JGI25386J43895_100328803	3300002912	Grasslands Soil	MTTDDTPTIDEPSKRLTEMILKGEDQESARIATEIVGGRPETNDIVDAISETMNIVADLHEVERYTVQQVE
Ga0066674_102568412	3300005166	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIR
Ga0066672_104083421	3300005167	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESA
Ga0066677_106738301	3300005171	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIATEIVGGRSATNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRP
Ga0066680_100247205	3300005174	Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSKTNDIVDAISETMNIVADLHEVERYTVQQVESCERA
Ga0066688_104749351	3300005178	Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAI
Ga0066678_100707131	3300005181	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESC
Ga0066678_107710591	3300005181	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCE
Ga0066676_105233461	3300005186	Soil	MTTDETAILNEPSKRLTEVILKGDDQDAGRIAGEIASGKTQTNELVDTISETMNIVADLHEVDRYTVQQVERCERAAESALNAIRPGLKVEQRRI
Ga0070708_1005740661	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTTDDALNRDESSKRLTEMILKGEEQDAARIAGEIASGRTETNDVVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDPHTFD
Ga0066686_109438621	3300005446	Soil	MTTDENPTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVEQVESCERAAESALNAIRPGLKVEQRRISGKVMV
Ga0066682_104413652	3300005450	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCER
Ga0066682_107939662	3300005450	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLK
Ga0066681_103104691	3300005451	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDTVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQR
Ga0066697_100266015	3300005540	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDIVDAISETMNIVADLHEVERYTVQQVESCER
Ga0066697_106654932	3300005540	Soil	MTTDETAILNEPSKRLTEVILKGDDQDAGRIAGEIASGKTQTNELVDTISETMNIVADLHEVDRYTVQQVESCERAAESALNAIRPGLKVE
Ga0066695_102942501	3300005553	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVE
Ga0066695_104405321	3300005553	Soil	MTTDETPRIDDPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCER
Ga0066695_106447032	3300005553	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVE
Ga0066707_102209882	3300005556	Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDASSETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQ
Ga0066704_100172387	3300005557	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSATNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGI
Ga0066704_104015252	3300005557	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVSGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGI
Ga0066704_107387252	3300005557	Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSKTNDIVDAISETMNIVADLHEVERYTVQQVESCER
Ga0066700_100830391	3300005559	Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSKTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAI
Ga0066700_104326402	3300005559	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAI
Ga0066700_104412762	3300005559	Soil	MTTDETSTIDEPSKRLTKMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQ
Ga0066691_102445482	3300005586	Soil	MTTDETPRIDDPSKRLTEMILKGEDQESARIASEIVGGRTQTNDIVDAISETMNIVADLHEVERYTVQQVESCERA
Ga0066706_113630701	3300005598	Soil	MTTDETSTVDEPSKRLTEMILKGEDQESARIAAEIVSGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAI
Ga0066653_103025832	3300006791	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCE
Ga0066665_102678981	3300006796	Soil	MTTDETSTVDEPSKRLTEMILKGEDQESARIAAEIVSGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIK
Ga0066665_106457521	3300006796	Soil	MTTDETPTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIK
Ga0066659_100867004	3300006797	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIK
Ga0099793_100239451	3300007258	Vadose Zone Soil	MTTDETAILNEPSKRLTEVILKGDDQDAARVAGEIASGKTQTNELVDTISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGD
Ga0099793_104066982	3300007258	Vadose Zone Soil	MTTDETAILNEPSKRLTEVILKGDDQDAARIAGEIASGKTQTNELVDTISETMNIVADLHEVDRYTVQQVESCERAAESALNAIRP
Ga0066710_1046800372	3300009012	Grasslands Soil	MTTDETSRIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTV
Ga0099829_106387582	3300009038	Vadose Zone Soil	MTTDETAILNEPSKRLTEVILKGNDQDAARIAGEIASGKTQTNELVDTISETMNIVADLHEVDRYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDP
Ga0099827_108001051	3300009090	Vadose Zone Soil	MTTDDTPTLNEASKRLTEVILKGDDQDAARIAGEITSGRAETNDVVDAISETMNIVSDLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDPHT
Ga0066709_1039853631	3300009137	Grasslands Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSKTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRI
Ga0134071_100740631	3300010336	Grasslands Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMV
Ga0134062_100182812	3300010337	Grasslands Soil	MTTDETSRIDEPSKRLTEMILKGEDQESARIATEIVGGRSATNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIDQESK*
Ga0137391_102771003	3300011270	Vadose Zone Soil	MTTDLTPAIDEPSKRLTEMILKGEDQESARIAAEIVGGRSEANAIVDAISETMNIVADLHEVERYTVQQVEKCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDPHTF
Ga0137393_109931972	3300011271	Vadose Zone Soil	MTTDLTPAIDEPSKRLTEMILKGEDQESARIAAEIVIGRSEANDIVDAISETMNIVADLHEV
Ga0137389_106641992	3300012096	Vadose Zone Soil	MTTDLTPAIDEPSKRLTEMILKGEDQESARIAAEIVSGRSEANAIVDAISETMNIVADLHEVERYTVQQVEKCERAAES
Ga0137364_100813964	3300012198	Vadose Zone Soil	MTTDEIPRIDDPSKRLTEMILKGEDLESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCER
Ga0137364_109113031	3300012198	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDTISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSL
Ga0137383_101289454	3300012199	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDTISETMNIVADLHEVERY
Ga0137383_105455882	3300012199	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRLETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESA
Ga0137365_104439272	3300012201	Vadose Zone Soil	MTTNTPAGSDEQSKRLTEVILKGDEIDAARIAGELASGRTETNDVVDTISETMNIVADLHEVERYTSEQVAGCERAAEKALEAIRPRIRLEQKRITGKVMVTSL
Ga0137365_111067341	3300012201	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQ
Ga0137380_115595161	3300012206	Vadose Zone Soil	MTTEDTPTLDEPSKRLTEMILKGEDQDAARIAGEIATGRAETNDVVDAISETMNIVADLHEVDRYTVQQVESCERAAESALNAIRPGIK
Ga0137381_104973772	3300012207	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRLETNDIVDAISETMNIVADLHEVERYTVQQVESCE
Ga0137376_109818791	3300012208	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDTISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGD
Ga0137376_117673681	3300012208	Vadose Zone Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGD
Ga0137379_100826794	3300012209	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYT
Ga0137379_108627122	3300012209	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRLETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAE
Ga0137378_101042894	3300012210	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDTISETMNIVADLHEVERYTVQQVESCERAAESAL
Ga0137378_112540932	3300012210	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRLETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAES
Ga0137377_108715092	3300012211	Vadose Zone Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDIVDAISETMNIVADLHEV
Ga0137387_103140092	3300012349	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCER
Ga0137387_105454832	3300012349	Vadose Zone Soil	MTTDDASTLDETSKRLTEVILKGDDQDAASIAGEIASGREETNDVVAAISETMNIVSDLHEVERYTVQQVESCERAAESALNAIRPRLKVKQRRISGRVMVTSLHGDPHTF
Ga0137387_106054511	3300012349	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRLETNDIVDAISETMNIVADLHEVERYTVQQVESCER
Ga0137384_104769621	3300012357	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDTISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVM
Ga0137384_107136732	3300012357	Vadose Zone Soil	MTTYETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRLETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDPHRF
Ga0137385_102974651	3300012359	Vadose Zone Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIKVEQRRI
Ga0137390_106461952	3300012363	Vadose Zone Soil	MTTDLTPAIDEPSKRLTEMILKGEDQESARIAAEIVSGRSEANAIVDAISETMNIVADLHEVER
Ga0137396_103946671	3300012918	Vadose Zone Soil	MTTDETAILNEPSKRLTEVILKGDDQDAARVAGEIASGKTQTNELVDTISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVT
Ga0134077_102469152	3300012972	Grasslands Soil	MTTDDTPTLNETSKRLTEVILKGDDQDAARIAGEIAGGRAETNDVVDTISETMNIVSDLHEVERYTVQQVESCERAAERALNAIRPRLKVEQRRISGRVMVTSLHGDPHTFDKTL
Ga0134077_104274192	3300012972	Grasslands Soil	MTTDDTPTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIKVEQRRISGKVMVT
Ga0134077_105653401	3300012972	Grasslands Soil	MTTDETAILNEPSKRLTEVILKGDDQDAARVAGEIASGKTQTNELVDTISETMNIVADLHEVDRYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMV
Ga0134087_100627981	3300012977	Grasslands Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIATEIVGGRSATNDIVDAISETMNIVADLHEVERYTVQQ
Ga0066655_110365092	3300018431	Grasslands Soil	MTTDDTPTLNDTSKRLTEVILKGDDQDAARIAGEIAGGRAETNDVVDTISETMNIVSDLHEVERYTVQQVESCERAAERALNAIRPRLKVEQRRISGR
Ga0066669_100196041	3300018482	Grasslands Soil	MTTDETSRIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQV
Ga0210405_103849381	3300021171	Soil	MTTEDTPTPDASSKRLTEVILKGEEQEAARIAGEIASGNTQTNDLVDAISETMNIVADLHDVERYTVQQVESCERAA
Ga0209236_10370244	3300026298	Grasslands Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGKSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAI
Ga0209236_10586411	3300026298	Grasslands Soil	MTTDETPRIDDPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRIS
Ga0209154_10064191	3300026317	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSATNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNA
Ga0209154_10133491	3300026317	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNA
Ga0209470_12863561	3300026324	Soil	MTTEETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSQTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVT
Ga0209801_13386092	3300026326	Soil	MTTDDTPTIDEPSKRLTEMILKGEDQESARIATEIVGGRPETNDIVDAISETMNIVADL
Ga0209802_10410871	3300026328	Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSKTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRP
Ga0209803_10064329	3300026332	Soil	MTTDENPTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAA
Ga0209158_100306113	3300026333	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSATNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIKVEQRRISGKVMVTSLHGDPHR
Ga0209158_10179621	3300026333	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIKVEQRRISGKVMVTSLHGDPHR
Ga0209158_10813711	3300026333	Soil	MTTDETPRIDDPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQ
Ga0209377_11680951	3300026334	Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSKTNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDP
Ga0209159_11665452	3300026343	Soil	MTTDETPRIDDPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVM
Ga0257179_10232701	3300026371	Soil	MTTDLTPAIDEPSKRLTEMILKGEDQESARIAAEIVSGRSEANAIVDAISETMNIVADLHEVERYT
Ga0257179_10429721	3300026371	Soil	MTTDLTPAVDEPSRRLTEMILKGEDQESARIAAEIVSGRSEANDIVDAISETMNIV
Ga0257181_10556262	3300026499	Soil	MTTDETAILNEPSKRLTEVILKGDDQDAARIAGEIASGKTQTNELVDTISETMNIVADLHEVDRYTVHQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDPHTFDKT
Ga0209690_10172734	3300026524	Soil	MTTDENPTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERAS
Ga0209378_12357692	3300026528	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIKV
Ga0209160_10908503	3300026532	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVSGRSETNDIVDAISETMNIVADLHEVERY
Ga0209805_10220164	3300026542	Soil	MSTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGIKVEQRRISGKVMVTSLHGD
Ga0209648_100396156	3300026551	Grasslands Soil	MTTDETAILNEPSKRLTEVILKGDDQDAARIAGEIASGKTQTNELVDTISETMNIVADLHEVDRYTVQQVESCERAAESALNAIRPGLKVEQR
Ga0209577_100590364	3300026552	Soil	MTTDETSTIDEPSKRLTEMILKGEDQESARIAAEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAES
Ga0209076_10009021	3300027643	Vadose Zone Soil	MTTDETAILNEPSKRLTEVILKGDDQDAARVAGEIASGKTQTNELVDTISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPG
Ga0209076_10240391	3300027643	Vadose Zone Soil	MTTDETPRIDEPSKRLTEMILKGEDQESARIASEIVGGRSETNDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGD
Ga0209283_103238921	3300027875	Vadose Zone Soil	MTTDLTPAIDEPSKRLTEMILKGEDQESARIAAEIVSGRSEANDIVDAISETMNIVADLHEVERYTVQQVESCERAAESALNAIRPGLKVEQRRISGKVMVTSLHGDPHTFDK
Ga0307479_113459361	3300031962	Hardwood Forest Soil	MTTDDTQTVDAPSKRLTEMILKGEDQVAARIAGEIATGKAETNDIVDAISETMNIVADLHEVERYTGQQVESCERA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097049

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences