Metagenome / Metatranscriptome Family F096993

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096993
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	103 residues
Representative Sequence	MNYTTLIFDAFDTVIHINTSKLPTLHIDGQEVPTTAPAVYDAYAALFDKINFDVFYSAFSQSFARVTTRRRTDLKEILSQQRFKIMLELLG
Number of Associated Samples	82
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.00 %
% of genes near scaffold ends (potentially truncated)	94.23 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (20.192 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.10% β-sheet: 6.72% Coil/Unstructured: 41.18%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00005	ABC_tran	82.69
PF09822	ABC_transp_aux	3.85
PF13419	HAD_2	0.96
PF07676	PD40	0.96
PF14238	DUF4340	0.96
PF13476	AAA_23	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.81 %
Unclassified	root	N/A	3.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	32.69 %
Unclassified	root	N/A	3.85 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.69 %
Unclassified	root	N/A	3.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01EQZOU	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
2228664022\|INPgaii200_c0671144	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101409284	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300000956\|JGI10216J12902_120133450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300004139\|Ga0058897_11087784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300004281\|Ga0066397_10104685	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300004633\|Ga0066395_11024688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300004643\|Ga0062591_102645843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005181\|Ga0066678_10285156	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300005187\|Ga0066675_11218505	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005187\|Ga0066675_11314802	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300005290\|Ga0065712_10662282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005332\|Ga0066388_105860893	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005332\|Ga0066388_107937129	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300005446\|Ga0066686_10200156	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005451\|Ga0066681_10310983	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300005451\|Ga0066681_10634722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300005518\|Ga0070699_101826148	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300005552\|Ga0066701_10962753	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005561\|Ga0066699_10823155	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005617\|Ga0068859_101649144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005713\|Ga0066905_100777855	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005764\|Ga0066903_101553269	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300005764\|Ga0066903_106888193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300006032\|Ga0066696_10035438	All Organisms → cellular organisms → Bacteria → Acidobacteria	2705	Open in IMG/M
3300006796\|Ga0066665_10030056	All Organisms → cellular organisms → Bacteria	3548	Open in IMG/M
3300006797\|Ga0066659_11340769	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300006852\|Ga0075433_11258017	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300006854\|Ga0075425_100510540	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300006881\|Ga0068865_101009483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300006914\|Ga0075436_101183583	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300006954\|Ga0079219_12030689	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300007076\|Ga0075435_101758838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300009094\|Ga0111539_10743443	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300009137\|Ga0066709_100167134	All Organisms → cellular organisms → Bacteria → Acidobacteria	2841	Open in IMG/M
3300009137\|Ga0066709_102415449	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300009162\|Ga0075423_11043472	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300009162\|Ga0075423_12185460	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009162\|Ga0075423_12323753	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300009792\|Ga0126374_10643750	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300009792\|Ga0126374_11442276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300009792\|Ga0126374_11582628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009792\|Ga0126374_11621742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300009792\|Ga0126374_11797586	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300010043\|Ga0126380_11430383	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300010046\|Ga0126384_11481711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300010047\|Ga0126382_10360143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1119	Open in IMG/M
3300010326\|Ga0134065_10319042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300010333\|Ga0134080_10178016	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300010336\|Ga0134071_10005446	All Organisms → cellular organisms → Bacteria	4857	Open in IMG/M
3300010358\|Ga0126370_12310907	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300010360\|Ga0126372_11672132	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300010360\|Ga0126372_12668207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300010360\|Ga0126372_12798192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300010361\|Ga0126378_10439626	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300010366\|Ga0126379_13181177	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300010397\|Ga0134124_12802353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010400\|Ga0134122_12662271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300010401\|Ga0134121_11418840	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300010401\|Ga0134121_13080478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300011119\|Ga0105246_11568511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300012206\|Ga0137380_11463321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300012207\|Ga0137381_10083618	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300012211\|Ga0137377_10078812	All Organisms → cellular organisms → Bacteria	3096	Open in IMG/M
3300012351\|Ga0137386_10518391	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012356\|Ga0137371_10278063	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300012399\|Ga0134061_1284768	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1207	Open in IMG/M
3300012948\|Ga0126375_11744122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012948\|Ga0126375_11943257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012955\|Ga0164298_11570230	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300012960\|Ga0164301_11240213	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012971\|Ga0126369_11001099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300012971\|Ga0126369_11081070	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300012971\|Ga0126369_11909684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012975\|Ga0134110_10536219	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300014325\|Ga0163163_10481568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300015358\|Ga0134089_10076741	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300015371\|Ga0132258_10626093	All Organisms → cellular organisms → Bacteria	2704	Open in IMG/M
3300015374\|Ga0132255_100318031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2245	Open in IMG/M
3300015374\|Ga0132255_104199855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300015374\|Ga0132255_104960527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300016341\|Ga0182035_10959484	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300016371\|Ga0182034_11750853	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300016404\|Ga0182037_11179888	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300016404\|Ga0182037_11427673	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300017657\|Ga0134074_1062319	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300018468\|Ga0066662_12411473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300021372\|Ga0213877_10226044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300021403\|Ga0210397_10853788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	704	Open in IMG/M
3300021404\|Ga0210389_10499096	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300021560\|Ga0126371_13305940	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300025930\|Ga0207701_11188211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300026298\|Ga0209236_1146170	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300026315\|Ga0209686_1130215	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300026538\|Ga0209056_10028154	All Organisms → cellular organisms → Bacteria	5350	Open in IMG/M
3300027646\|Ga0209466_1059391	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300027874\|Ga0209465_10015162	All Organisms → cellular organisms → Bacteria	3487	Open in IMG/M
3300031820\|Ga0307473_10513799	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031833\|Ga0310917_10724530	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300032421\|Ga0310812_10552198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.69%
Host-Associated	Host-Associated	17.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.69%
Plants	Host-Associated → Plants	17.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.73%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.15%
Loam	Environmental → Terrestrial → Soil → Loam	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_2787130	2032320005	Soil	VTSESDILGNRTMNYNTLIFDAFDTVIHINESRLPTYRVDGKTVPTTAPAAHRAYTALFGKLDFDAFYAAFSQSYNRVTARRRVDLREIPSQER
INPgaii200_06711442	2228664022	Soil	MNYTTLIFDAFDTVIHINTSKLPTLQIDGQELPTTAPAVYDAYAELFGKINFDVFYSAFSQSFARVTTNRRADLKEILSQQRFRIMLELLGHSEPDLT
INPhiseqgaiiFebDRAFT_1014092841	3300000364	Soil	MNYTTLIFDAFDTVIHINTSKLPTLQIDGQELPTTAPAVYDAYADLFGKIDFDVFYSAFSQSFARVTTSRRADLKEILSQQRFRIMLELLGHSEPDLTDLVVEKITKA
JGI10216J12902_1201334502	3300000956	Soil	MNYTTLIFDAFDTVIHINTSKLPTLQIDGQELPTTASAVYDAYAELFGKINFDVFYSAFSQSFARVTTSRRADLKEILSQQRFRIMLELLGHSEPDLTDLVVEKITKAHMRQLQGSFEVRDDVITVLDWAKRRYRTA
Ga0058897_110877842	3300004139	Forest Soil	MHYTTLIFDAFDTVVHINESKLPTYRVDGKTVPTTAPAAHFAYTRLFRKLNFDVFYAAFSQSYTQVTTRRRADLKEIPSQER
Ga0066397_101046852	3300004281	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTSKLPTLHIDGQELPTTALAVYDAYAELFDKISFDVFYSAFSQSFTRVTTSRRADLK
Ga0066395_110246881	3300004633	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTAKLPTLRVDGQDLPTTASGAYDAYAELFAKIPFDDFYRAFSQSFTRVTALRRADLKEILSQQRFRIMLELLGHSDAEITDASLEHITKAHMRLLRESFEVRPEAIQVLDWAKGRYRTAMIS
Ga0062591_1026458431	3300004643	Soil	MNYTTLIFDAFDTVIHINNSRLPTLRIDGQEIPTTAPAAYEAYTALFEKIEFDVFYRAFSQSFAQVTARRRVDLKEILSQERFRIMLDLLGHPQPEVTDAAVEQITRAHMG
Ga0066678_102851561	3300005181	Soil	MNYNTLIFDAFDTVIHINESRLPTHRVDGKTVPTTAPAVHRAYSALFGKLDFDAFYAAFSQSYTQITARRRVDLREIPSQERFKIMLDL
Ga0066675_112185052	3300005187	Soil	MHYNTLIFDAFDTVVHINESKLPVHRMDGKAVPTTAPAVHRAYNELFRKVNFDVFYAAFSQSYNQITAQRRADLKEIPSQERF
Ga0066675_113148022	3300005187	Soil	MNYSTLIFDAFDTVIHINESRLPTYPVNGKSIPTTAPAVHRAYSALFAKLDFDAFYAAFSQSYNQVTARRRVDLREISSQERFKIMLDL
Ga0065712_106622822	3300005290	Miscanthus Rhizosphere	MRTMNYTTLIFDAFDTVIHINESKLPTHRVNGKLVATTARAAYAAYTELFGLSDFDAFYDAFSQSFVQVTTRRRADLKEVLSQERFGI
Ga0066388_1058608931	3300005332	Tropical Forest Soil	MKSMNYTTLIFDAFDTVIHINTSKLPVLRIDGEDVPTTAPAAFAAYEKLFGKTDFDVFYRAFSQSFKQVAQLRRIDLKEILSQRRFKIMLEMLGRPESEITDAAAE
Ga0066388_1079371291	3300005332	Tropical Forest Soil	LAITAGRLCDHSACAFRTMDYTTLIFDAFDTIVHINEAKLPTHLIEGKPVPTTAPAVHTTYTRLFRKLDFDAFYNAFSQSYIQVATKRRGDLREISSQERFRTMLDILGH
Ga0066686_102001561	3300005446	Soil	MHYNTLIFDAFDTVIHINESKLPVHRTDGKAVPTTAPAVHRAYSQLFRKLDFDVFFAAFSQSFNQITMQRRADLREIPSQERFKIMLCL
Ga0066681_103109831	3300005451	Soil	MHYNTLIFDAFDTVIHINESKLPLHRTDGKAVPTTAPAVHRAYSQLFHKLDFDVFYAAFSQSYNQVTTQRRADLKEIPSQERFKIML
Ga0066681_106347222	3300005451	Soil	MTIMNYTTLIFDAFDTVIHINESKLPAYRVNGKAVPTTAYAAYDAYIALFGKSEFDVFYGAFSQSFIQVTARRRADLKEILSQERFRIMLQLLGHAPEKITDAVLETITKAHMAELQQAFEVR
Ga0070699_1018261482	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNYNTLIFDAFDTVIHINESRLPTHRVDGKTVPTTAPAVHRAYSALFGKLDFDAFYAAFSQSYNQITARRRVDLREIPSQERFKIMLDLLGHPAAEITDDAVETITKAHMAQ
Ga0066701_109627532	3300005552	Soil	MKPMNYTTLIFDAFDTVIHINTLKLPTLRVNGQEISTTAPAAYEAYAELFGEIDFDDFYRAFSQSFTQVTARRRADLKEILSQE
Ga0066699_108231551	3300005561	Soil	MNYNTLIFDAFDTVIHINESRLPTHRVDGKTVPTTAPAVHRAYSALFGKLDFDAFYAAFSQSYTQITARRRVDLREIPSQERFKIMLDLLGHPAAEITD
Ga0068859_1016491441	3300005617	Switchgrass Rhizosphere	MNYTTLIFDAFDTVIHINSSKLPTIRVEGREVSTTAPAAYEAYTSIYGKTDFDVFYSAFSQSFTWATEQRRVDLKEILSQRRFQMMLETLGHKEEEMSSASIETITRAHMQQLQESFEVRRETVEVLEWAKQRYRTAMISNFAYA
Ga0066905_1007778551	3300005713	Tropical Forest Soil	MNYTALIFDAFDTVIHINTSKLPTLHIDGQELPTTALAVYDAYAELFDKINFDVFYSAFSQSFARVTTSRRADLKEILSQQRFRIMLELLGHSEPDLTDLTVEKITKAHMRQLQGSFEVR
Ga0066903_1015532691	3300005764	Tropical Forest Soil	MRIMHYTTLLFDAFDTVIHINESKLPTYDVGGKAVPTTAPAVHSAYCNIFGKKELDVFYRAFSQSYLQVTARRRVDLKEIVSQ
Ga0066903_1068881932	3300005764	Tropical Forest Soil	MKYTTLIFDAFDTVIHINSSKLPTHRVDGREIPTTAPAAHRAYAELFGKLDFDVFYDAFSQSFNEVTARRRVDLKEILSQERFRMMLELLGHPQETVTDAAVEAITKAHMAQLQQSFEVRSEVLQV
Ga0066696_100354384	3300006032	Soil	MHYTTLIFDAFDTVVHINESKLPAYRVEGKMVPTTAPAVHTTYTNLFCKVDFDDFYAAFSQSYRQMTTKRRGDLREISSQQRFR
Ga0066665_100300561	3300006796	Soil	MNYSTLIFDAFDTVVHINESKLPAYPIDGTLVHTTAPAVHDAYIEHFGKLDFDVFYRAFSQSFTKVNALRYSDLKEIPSQERFRVMLGILGHDASGVDAEIL
Ga0066659_113407692	3300006797	Soil	MNYNTLIFDTFDTVHHINESRLPTHPVDGKTVQTTAPAVHRAYSALFGKPDFDAFYSPFTQSYTQITARGRVDLRE
Ga0075433_112580172	3300006852	Populus Rhizosphere	MVSASESDILANESMNYTTLIFDAFDTVIHINTARLPTLHVDGQDVPTTARAAYEAYTELFAKITFDDFYRAFSQSFTRVTTLRRADLREILSQQRFRIMLE
Ga0075425_1005105401	3300006854	Populus Rhizosphere	MVSASESDILANESMNYTTLIFDAFDTVIHINTARLPTLHVDGQDVPTTAPAAYEAYTELFAKITFDDFYRAFSQSFTRVTTLRRADLREILSQQRFRIMLELLGHPEPAITDAALEHITRAHMRLL
Ga0075434_1024575511	3300006871	Populus Rhizosphere	MNYTTLIFDAFDTVIHINTARLPTLHVDGQDVPTTARAAYEAYTELFAKITFDDFYRAFSQSFTRVTTLRRADLREILSQQRFRIMLELLGHPEPAITDAALEHITRAHMRLLRESFEVRPEVLQVLDWAKRRYRTAMISNFAYAPALYESL
Ga0068865_1010094832	3300006881	Miscanthus Rhizosphere	MKSMNYTTLIFDAFDTVIHINTSKLPVLRVNGEEVSTTAPAVYEAYSALFGKSDFDVFYHAFSQSFLRVTAQRRVDLREVLSQERFRMMLDM
Ga0075436_1011835831	3300006914	Populus Rhizosphere	MNYTTLIFDAFDTVIHINTSKLPTLQIDGQELPTTAPAVYDAYTELFGKINFDVFYSAFSQSFARVTTSRRADLKEILSQQRFRIMLEL
Ga0079219_120306892	3300006954	Agricultural Soil	MNYTTLLFDAFDTVIHINESKLPTYVVDGKAVPTTAPAVHSAYCNIFGKKEFDVFYSAFSQSYLQVNARRQVDLKEIVSQERF
Ga0075435_1017588381	3300007076	Populus Rhizosphere	MNYTTLIFDAFDTVIHINTSKLPTLQIDGQELPTTAPAVYDAYTELFGKINFDVFYSAFSQSVARVTTSRRADLKEILSQQRFRIMLELLGHSEPHLTDLTVEKITKAHMRQLQGSFEVRDEVIRVLDWAKRRYRTA
Ga0111539_107434432	3300009094	Populus Rhizosphere	MNYTTLIFDAFDTVIHINTSKLPTLQIDGQELPTTAPAVYDAYTELFGKINFDVFYSAFSQSFARVTTSRRADLKEILSQQRFRIMLELLGHSEPHLTDLTVEKITKAHMRQLQGSFEV
Ga0066709_1001671344	3300009137	Grasslands Soil	MNYSTLIFDAFDTVVHINTSKLPSHRVNGELIPTTAPAAYAAYAELYGKLDFDVFYDAFSQSFNQVTARRRADLREILSQERFKIMLHLLGHDAQQITDQAVETITKAHMAQLQQSFEMRPEVL*
Ga0066709_1024154492	3300009137	Grasslands Soil	MNYSTLIFDAFDTVVHINESKLPTYPVDGTLVHTTAPAVHDAYMEHFGKLDFDVFYRAFSQSFAKVNARRYSDLKEIPSQERFRVMLGILGHDASGVDAEILVRLTEAHIAQLRQ
Ga0075423_110434722	3300009162	Populus Rhizosphere	MNYTTLIFDAFDTVIHINTAKLPMLSIEGRDVPTTAPAAYAAYMDLFGKISFDDFYRGFSQSFIHVTALRRADLKE
Ga0075423_121854602	3300009162	Populus Rhizosphere	MTSESDILTNEIMKYTTLIFDAFDTVIHINSSKLPTHRVDGRNVPTTAPAAHRAYTDLFGELDFDVFYVAFSQSFDEVTRRRRADLREILSQERFRMMLEMLGH
Ga0075423_123237532	3300009162	Populus Rhizosphere	MNYNTLIFDAFDTVIHINESRLPTYRIDGRTVPTTAPAAHRAYTALFGKLDFDAFYAAFSQSYNQVTARRRVDLREIPSQ
Ga0126374_106437501	3300009792	Tropical Forest Soil	MDYTTLLFDAFDTVIHINESKLPTHDVGGKAVPTTAPAVHSAYCSFFGKKEFDVFYGAFSQSYLQVTARRRVDLKEIVSQERFRIMLGLLEHPSGEVTDEVIEALTRAH
Ga0126374_114422761	3300009792	Tropical Forest Soil	MKYTTLIFDAFDTVIHINSSKLPTHRVDGREIPTTAPAAHRAYAELFGKLDFDVFYDAFSQSFNEVTARRRVDLKEILSQERFRMMLELLGHSPERVTDAAVEAITKAHMAQLQQSFEVR
Ga0126374_115826281	3300009792	Tropical Forest Soil	MKSMNYTTLIFDAFDTVIHINTSKLPVLRVNGEEVSTTAPAVYEAYSELFGKSNFDVFYHAFSQSFMQVTAQRRIDLREILSQQRFRMMLD
Ga0126374_116217422	3300009792	Tropical Forest Soil	MKSLDLKSMNYTTLIFDAFDTVIHINTAKLPTLRIDGQDVPTTAPAAYDAYVEAFGETDFDAFYHAFSQSFKLVTTTRRGDLREILSQERFRMMLEMLGHT
Ga0126374_117975861	3300009792	Tropical Forest Soil	MNYSTLIFDAFDTVIHINESKLPTHHAAGKKVPTTAPAVHEAYCAIFGKKEFDVFYDAFSQSFNQVNLRRRADLREIVSQERFKIMLDLLSHPADEITNETVEQIT
Ga0126380_114303832	3300010043	Tropical Forest Soil	MNYTTLIFDAFDTVIHINESKLPTHHTAGKTMPTTAPAVHKAYCGIFGKKEFDVFYAAFSQSLNQVAIRRRADLREIVSQERFKIMLDLLNHPS
Ga0126384_114817111	3300010046	Tropical Forest Soil	MKSMNYTTLIFDAFDTVIHINTSKLPTLRVDGQDVSTTAPAAYEAYAALFPKTDFDVFYRAFTQSFTQVTARRRADLREVLSQERFRIMLELLGHGGAELTDGPVETITKAH
Ga0126382_103601432	3300010047	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTSKLPTLHIDGQEVPTTAPAVYDAYAALFDKINFDVFYSAFSQSFARVTTRRRTDLKEILSQQRFKIMLELLGHSEPDLTDAAVEKITKAHMRQLQASFEVRDEAIKVLDWAKRHYR
Ga0134065_103190421	3300010326	Grasslands Soil	MKYSTLIFDAFDTVIHINESKLPTHIVNGKPVPTTAPAAHTSYTELFGKLDFDVFYSAVSQSFTQVTARRRSDLREILSQERFRIMLDLLGHPPDAITGAALEKITRADMGL
Ga0134080_101780161	3300010333	Grasslands Soil	MNYSTLIFDAFDTVVHINESKLPTYAVDGSAVHTTAPAVHAAYIEYFGKLDFDVFYRAFSQSFAKVNALRHADLKEIPSQ
Ga0134071_100054461	3300010336	Grasslands Soil	MHYNTLIFDAFDTVIHINESRLPVHRTDGKAVPTTAPAVHRAYNQLFRKVDFDVFYAAFSQSFTEITAQRRADLKEIPSQERFKIMLCLLGHPPDEITTDATETITKAHMAQLQE
Ga0126370_123109071	3300010358	Tropical Forest Soil	MNYNTLIFDAFDTVIHINESKLPTHQVNGKSVPTTAPAAHKAYCEVFAKKDFDVFYGAFSQSYTEVNTRRRADLREVLSQERFRIMLGLLGH
Ga0126372_116721321	3300010360	Tropical Forest Soil	MNYTTLLFDAFDTVIHINESKLPTHHADGKTVPTTAPAVHKAYCGIFGKKDFDVFYDAFSQSLNQVAIRRRADLKEIVSQERFKIMLELLNHPSEEATDG
Ga0126372_126682072	3300010360	Tropical Forest Soil	MKSMNYTTLIFDAFDTVIHINTSKLPVLRIDGEEIPTTAPAALAAYEELFGKTDFDVFYRAFSQSFQQVTELRRVDLREILSQQRFKIMLELLGHSESEITEVATD
Ga0126372_127981922	3300010360	Tropical Forest Soil	MDYSTLIFDAFDTVIHINQSRLPTYTVDGRPVPTTAPAAHAAYCDIFGKREFDAFYGAFSQSFIQVTTRRRADFKEVVSQERFRLMLELLD
Ga0126378_104396263	3300010361	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTSKLPILHIDGQELPTTALAVYDAYAELFDKINFDVFYSAFSQSFARVTTSRRADLKEILSQQRFRIMLELLGHSEPDLTDLTVEKITK
Ga0126379_121050251	3300010366	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTAKLPILRVDGQDVPTTAPAAYDAYAELFAKIPFDDFYRAFSQSFARVTALRRADLKEILSQQRFRIMLELLGHSDAEITDASLEHITKAHMRLLRESFEVRPEAIQVLDWAKGRYRTAMI
Ga0126379_131811772	3300010366	Tropical Forest Soil	MERIMNYTTLLFDAFDTVIHINESKLPTYAVNGKVVPTTAPAVHAAYCNIFGKKEFDVFYGAFSQSYSQVNARRRVDLKEIVSQ
Ga0134124_120150832	3300010397	Terrestrial Soil	MKSMNYTTLIFDAFDTVIHINNSRLPTLRIDGQEIPTTAPAAYEAYTALFEKIEFDVFYRAFSQSFAQVTARRRVDLKEILSQERFRIMLDLLGHPQPEVTDAAVEQLTRAHMGQLQQSFEVRPQTFEILERAKTRYRTPMISNFAYA
Ga0134124_128023532	3300010397	Terrestrial Soil	MKSMNYTTLIFDAFDTVIHINTSKLPTLQIDGKEVSTTAPAAYEAYVDSFGKIDFDVFYRAFSQSYTQAISQRQQDFREVLTPQRFRFMLGMLGHPA
Ga0134122_126622711	3300010400	Terrestrial Soil	MTTMNYTTLIFDAFDTVIHINESKLPTHRVNGTAVATTAHAAHAAYAGLFGNLDFDVFYDAFSQSFARVTARRRSDLKEVLSQDRFRMMLQLLGHPDTEITEPAVEAITRAHMSRL
Ga0134121_114188402	3300010401	Terrestrial Soil	MNYTTLIFDAFDTVIHINESKLPTYLVDGKRVPTTAPAAHASYIELFGKSDFDVFYGAFSQSFIQVSARRRSDLREILSQERFRIMLDLLGHPPDAITDAAVEK
Ga0134121_130804781	3300010401	Terrestrial Soil	MNYTTLIFDAFDTVIHINSSKLPTIRVEGREVSTTAPAAYEAYTSIYGKRDFDVFYSAFSQSFTWATEQRRVDLKEILSQRRFQMMLET
Ga0105246_115685111	3300011119	Miscanthus Rhizosphere	MNYTTLIFDAFDTVIHINESKLPTHRVNGKLVATTARAAYAAYAELFGLSDFDAFYGAFSQSFVQVTTRRRADLKEVLSQER
Ga0137380_114633212	3300012206	Vadose Zone Soil	MNYSTLIFDAFDTVVHINTSKLPTHRVNGELIRTTAPAAYAAYAELYGKLDFDVFYDAFSQSFTQVTTRRRADLREILSQERFKIMLHLLGHDAQQITDQAVETITKAH
Ga0137381_100836184	3300012207	Vadose Zone Soil	MNYSTLIFDAFDTVVHINESKLPTCPIDGTLVHTTAPGVHDAYIEQFGKLDFDVFYRAFSQSFAKVNARRYSDLKEIPSQER
Ga0137377_100788121	3300012211	Vadose Zone Soil	MNYSTLIFDAFDTVVHINTLKLPTHRVNGQLIPTTAPAAYAAYAELYGKLDFDVFYDAFSQSFTQVTTRRRADLREILSQERFKIMLHLLGHNAQQITDQAVETITKAHMAQLQ
Ga0137386_105183912	3300012351	Vadose Zone Soil	MNYSTLIFDAFDTVVHINTSKLPTHRVNGELIPTTAPAAYAAYAELYGKLDFDVFYDAFSQSFTQVTTRRRADLREILSQERFKIMLHLLGHDAQQITDQAVETITKAHMAQLQQ
Ga0137371_102780631	3300012356	Vadose Zone Soil	MNYSTLIFDAFDTVVHINESKLPTYAVDGSAVHTTAPAVHAAYIEYFGKLDFDVFYRAFSQSFAKVNALRHARLKEIPSQERFKVMLGILGHD
Ga0134061_12847681	3300012399	Grasslands Soil	MHYNTLIFDAFDTVVHINESKLPVHRMDGKAVPTTAPAVHRAYNELFRKVNFDVFYAAFSQSYNQVTAQRRADLKEIPSQERFKVMLGLLGHSANEITDDAIETITKAHMAQLQE
Ga0126375_117441222	3300012948	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTSKLPTLHIDGQEVPTTAPAVYDAYAALFDKINFDVFYSAFSQSFARVTTRRRTDLKEILSQQRFKIMLELLG
Ga0126375_119432571	3300012948	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTAKLPMLHIDGQAVPTTAPAVYDAYTELFGKINFDVLYSAFSQSFARVTTSRRADLKEILSQQRFKIMLELLGHSQQDLTDAAVEKITKAHMRQLQGSFEVRDAAIKVLDWAK
Ga0164298_115702302	3300012955	Soil	MNYTTLIFDAFDTVIHINESKLPTHHAAGKTVPTTAPAVHKAYCGIFGKKEFDVFYDAFSQSFNQVSIRRRADLREIVSQERFKIMLELLNHPAYEVTDDAIEQITRAHMAQLRESFEVRPEVF
Ga0164301_112402132	3300012960	Soil	MNYTTLIFDAFDTVIHINESKLPTHHAGGKTVPTTAPAAHQAYCGLFGKKDLDVFYDAFSQSFNQVTVRRRADLREIISQERFRIMLEMLDHPA
Ga0126369_110010991	3300012971	Tropical Forest Soil	MNYTTLIFYAFDTVIHINTSRLPTLRIDGKEVPTTAPAAYEAYADLFGKIDFDEFYRAFSQSFSRVTTLRRADLKEILSQTRFVMMLELL
Ga0126369_110810702	3300012971	Tropical Forest Soil	MPSESDILKMRIMNYTTLIFDAFDTVIHINESKLPTHHAAGKTVPTTAPAVHKAYCGIFGKKEFDVFYDAFSQSLNQVAMRRRANLREIVSQERFKIMLDLLNHPADDITDESVEQITR
Ga0126369_119096842	3300012971	Tropical Forest Soil	MKSMNYTTLIFDAFDTIIHINTSKLPTVHIDGKEVPTTAPAAYQAYVDSFSKIDFDVFYRAFSQSYSESIVQRKQDHREVLTPQRFRIMLA
Ga0134110_105362191	3300012975	Grasslands Soil	MNYNTLIFDAFDTVIHINESRLPTHRVDGKTVPTTAPAVHRAYSALFGKLDFDAFYGAFSQSYTQITALRRVDLREIPSQERFKIMLDLLGHPAAEITDDAVET
Ga0163163_104815681	3300014325	Switchgrass Rhizosphere	MNYTTLIFDAFDTVIHINTSKLPVLHINGEQVSTTAPAVYEVYTELYGKTDFDAFYHGFSQSFREVTAKRRVDLREILSQQRFR
Ga0134089_100767412	3300015358	Grasslands Soil	MNYSTLIFDAFDTVVHIDASKLPAYRVDGTLVPTTAPAVYSAYVEHFGKLEFDVFYGAFSQSFVKVNERRYADLKEISSQERFSLMLGLLGHDSA
Ga0132258_106260931	3300015371	Arabidopsis Rhizosphere	MNYTTLIFDAFDTVIHINTAKLPTLRVDGQEVFTTAPAAYDAYAELFPKIDFDVFYHAFTQSFTQVTARRRADLKEVLSQERFRIMLELLGHEGAEPMDGPIQKITKAHLRSPQLSFEVRPEVVEVLGWAKSRYR
Ga0132255_1003180311	3300015374	Arabidopsis Rhizosphere	MKSMNYTTLIFDAFDTVIHINTSKLPVLRVNGEEVSTTAPAVYEAYSGLFGKSNFDVFYHAFSQSFLRVTAQRRVDLRE
Ga0132255_1041998552	3300015374	Arabidopsis Rhizosphere	MKSMNYTTLIFDAFDTVIHINNSKLPTLKVDGQEIPTTAPAAYAAYTALFGEIHFDVFYRAFSQSLTRVTATRRADLREVVSQQRFKIMLELLGHPEPE
Ga0132255_1049605271	3300015374	Arabidopsis Rhizosphere	MKSMNYTTLIFDAFDTVIHINTSKLPVLRRDGKEIPTTAHAVYDAYTRLFDKSDFDVFYHAFSQSFNKVAALRRVDLREVLSQHRFRIMLEML
Ga0182035_109594842	3300016341	Soil	MDYSTLIFDAFDTVIHINESKLPTYRVDGKAVPTTAFAAHAAYSVIFGKKEFDVFYDAFSQSYHKVTVRRRADLKEIVSQERFRIMLGLLGRPPDEITDEAVETITK
Ga0182034_117508532	3300016371	Soil	MDYSTLIFDAFDTVIHINESKLPTYRVDGKAVPTTAFAAHAAYSVIFGKKEFDVFYDAFSQSYHKVTVRRRADLKEIVSQERFRIMLGLLGRPPDEITDEAVETITKAHMAQLQESFE
Ga0182037_111798881	3300016404	Soil	MDYTTLIFDAFDTVIHINESKLPTYRVGGKNVPTTAPAAHAAYSTIFGKKEFDVFYDAFSQSYHKVTVRRRIDLKEIVSQERFKIML
Ga0182037_114276732	3300016404	Soil	MKYTTLIFDAFDTVIHVNESRLPTYRVEGKTVPTTAPAAHAAYSSIFGKKEFDVFYDAFSQSYHKVTVRRRIDLKEIVSQERFKIMLELLGHPQNEITDEAVET
Ga0134074_10623191	3300017657	Grasslands Soil	MNYSTLIFDAFDTVVHINESKLPAYPIGGTLVHTTAPAVHDAYIEHFGKLDFDVFYRAFSQSFTKVNALRYSDLKEIPSQERFRVMLGILGHD
Ga0066662_124114732	3300018468	Grasslands Soil	MKSMNYTTLIFDAFDTVIHINNSKLPVLHINGQEIPTTAPAVHEAYTAVFGEIDFDVFYNAFSQSFTQVTTLRRADLKEILSQQRFKMMLELLGHSEAEATDAAVETITKAHMGQLQ
Ga0213877_102260441	3300021372	Bulk Soil	MDYTTLIFDAFDTVIHINEARLPTYRVGGKSVPTTAPAAHEAYCGIFGKKDFDVFYGAFSQSYNLITARRRADLKEIISQERFRIMLELLEHPLTEIT
Ga0210397_108537882	3300021403	Soil	MNYTTLLFDAFDTVIHINESKLPTHDVGGRAVPTTAPAVHSAYCNFFGEKEFDVFYGAFSQSYLQVTARRRVDLKEIVSQERFRIMLTLLKHPSAEVTDDVIEALTRAHMHLLQESFEVRPDVLKA
Ga0210389_104990961	3300021404	Soil	MNYTTLLFDAFDTVIHINESKLPTHDVGGRAVPTTAPAVHSAYCNFFGEKEFDVFYGAFSQSYLQVTARRRVDLKEIVSQERFRIMLTLLKHPSAEVTDDVIE
Ga0126371_133059401	3300021560	Tropical Forest Soil	MDYSTLIFDAFDTVIHINESKLPTHRVDGKTVPTTAPAAHAAYSSIFGKKEFDVFYDAFSQSYHQVTARRRIDLKEIVSQERFKIMLELLGHPLNEITDEAV
Ga0207701_111882112	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNYTTLIFDAFDTVIHINNSRLPTLRIDGQEIPTTAPAAYEAYTALFEKIEFDVFYRAFSQSFAQVTARRRVDLKEILSQERFRIMLDLLGHPQPEVTDAAVEQITRAHMGQLQQSF
Ga0209236_11461702	3300026298	Grasslands Soil	MYYTTLIFDAFDTVVHINESKLPTYRVDGKVVPTTAPAANDAYTKLFRKLDFDVFYAAFSQSYTQVTTRRRADLKEIPSQERFKIMLELLGHSA
Ga0209686_11302152	3300026315	Soil	MNYNTLIFDAFDTVIHINESRLPTHRVDGKTVPTTAPAVHRAYSALFGKLDFDAFYAAFSQSYTQITARRRVDLREIPSQERFKIMLDLLGHPAAEITDDAVETITKAHMAQLEE
Ga0209057_12348251	3300026342	Soil	MNYNTLIFDAFDTVIHINESRLPTHRVDGKTVPTTAPAVHRAYSALFGKLDFDAFYGAFSQSYTQITALRRVDL
Ga0209056_100281546	3300026538	Soil	MNYSTLIFDAFDTVVHINESKLPAYPIDGTLVHTTAPAVHDAYIEHFGKLDFDVFYRAFSQSFTKVNALRYSDLKEIPSQERFRVMLGILGHDASGVDTEILVRLT
Ga0209466_10593912	3300027646	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTSKLPTLHIDGQELPTTALAVYDAYAELFDKISFDVFYSAFSQSFARVTTSRRADFSWRTSIGSG
Ga0209465_100151621	3300027874	Tropical Forest Soil	MNYTTLIFDAFDTVIHINTSKLPTLHIDGQELPTTALAVYDAYAELFDKINFDVFYSAFSQSFARVTTSRRADLKEILSQQRFRIMLELLGHSEPDLTDL
Ga0307473_105137991	3300031820	Hardwood Forest Soil	MNYNTLIFDAFDTVIHINESRLPTHRVDGKTVPTTAPAVHSAYSALFGKLDFDAFYAAFSQSYNQVTARRRVDLREIPSQERFKIMLELLGHPTAEITDDAIETITKAHMA
Ga0310917_107245301	3300031833	Soil	MDYSTLIFDAFDTVIHINESKLPTYRVDGKAVPTTAFAAHAAYSVIFGKKEFDVFYDAFSQSYHKVTVRRRADLKEIVSQERFRIMLGLLGRPPDEITDEAVETITKAHMAQLQESFEV
Ga0310812_105521981	3300032421	Soil	MKSMNYTTLIFDAFDTVIHINTSKLPTLQIDGKEVSTTAPAAYEAYVDSFGKIDFDVFYRAFSQSYTQAISQRQQDFREVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096993

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences