Metagenome / Metatranscriptome Family F096959

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096959
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	84 residues
Representative Sequence	MKTSVDLDDELAAEVERTVSLTREKPATVLRMAIRAGLPIVANRHQAPRPDGYFAEAYRRWPKERLELEAAFAKLKTGPDR
Number of Associated Samples	80
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.45 %
% of genes near scaffold ends (potentially truncated)	28.85 %
% of genes from short scaffolds (< 2000 bps)	78.85 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.692 % of family members)
Environment Ontology (ENVO)	Unclassified (36.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.308 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.03% β-sheet: 0.00% Coil/Unstructured: 66.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00150	Cellulase	2.88
PF13385	Laminin_G_3	1.92
PF01850	PIN	1.92
PF08760	DUF1793	1.92
PF03928	HbpS-like	1.92
PF07394	DUF1501	0.96
PF12708	Pectate_lyase_3	0.96
PF02569	Pantoate_ligase	0.96
PF07963	N_methyl	0.96
PF01244	Peptidase_M19	0.96
PF10502	Peptidase_S26	0.96
PF13676	TIR_2	0.96
PF02518	HATPase_c	0.96
PF17168	DUF5127	0.96
PF13964	Kelch_6	0.96
PF01261	AP_endonuc_2	0.96
PF04616	Glyco_hydro_43	0.96
PF14559	TPR_19	0.96
PF14849	YidC_periplas	0.96
PF11175	DUF2961	0.96
PF00697	PRAI	0.96
PF13500	AAA_26	0.96
PF04542	Sigma70_r2	0.96
PF00400	WD40	0.96
PF13418	Kelch_4	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	2.88
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	2.88
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	0.96
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	0.96
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.96

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	83.65 %
Unclassified	root	N/A	3.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	82.69 %
Unclassified	root	N/A	3.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	72.12 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	4.81 %
Unclassified	root	N/A	3.85 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	72.12 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4.81 %
Unclassified	root	N/A	3.85 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.96 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	72.12 %
Unclassified	root	N/A	3.85 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.92 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	0.96 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	72.12 %
Unclassified	root	N/A	3.85 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1.92 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.96 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	72.12 %
Unclassified	root	N/A	3.85 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.92 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.96 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	72.12 %
Unclassified	root	N/A	3.85 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.92 %
unclassified Bacteroides	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides	0.96 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	72.12 %
Unclassified	root	N/A	3.85 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.92 %
Bacteroides sp. HPS0048	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp. HPS0048	0.96 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17164460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3210	Open in IMG/M
3300000955\|JGI1027J12803_100012882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2054	Open in IMG/M
3300001213\|JGIcombinedJ13530_102945440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300001213\|JGIcombinedJ13530_106791897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	760	Open in IMG/M
3300001213\|JGIcombinedJ13530_106952202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300005180\|Ga0066685_10659847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300005557\|Ga0066704_10584563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300005561\|Ga0066699_10986933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300005575\|Ga0066702_10881824	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → unclassified Bacteroides → Bacteroides sp. HPS0048	533	Open in IMG/M
3300006034\|Ga0066656_10531603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300006046\|Ga0066652_100899864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	844	Open in IMG/M
3300006055\|Ga0097691_1017582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3207	Open in IMG/M
3300006797\|Ga0066659_10792375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300006800\|Ga0066660_11151698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300007255\|Ga0099791_10678842	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300007265\|Ga0099794_10288165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	849	Open in IMG/M
3300009012\|Ga0066710_100782282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1461	Open in IMG/M
3300009012\|Ga0066710_100936910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1334	Open in IMG/M
3300009012\|Ga0066710_101567846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1012	Open in IMG/M
3300009012\|Ga0066710_103222290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300009038\|Ga0099829_11041277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300009137\|Ga0066709_100583361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1590	Open in IMG/M
3300009548\|Ga0116107_1006080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5514	Open in IMG/M
3300009552\|Ga0116138_1092098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300010336\|Ga0134071_10288320	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	823	Open in IMG/M
3300010339\|Ga0074046_10174418	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300010366\|Ga0126379_11100955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	900	Open in IMG/M
3300010376\|Ga0126381_104949200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300011269\|Ga0137392_11289849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300011270\|Ga0137391_11228440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300011271\|Ga0137393_11100980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300012093\|Ga0136632_10455546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	572	Open in IMG/M
3300012096\|Ga0137389_11734002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012202\|Ga0137363_10026944	All Organisms → cellular organisms → Bacteria	3927	Open in IMG/M
3300012202\|Ga0137363_10806603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300012205\|Ga0137362_10344306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1291	Open in IMG/M
3300012205\|Ga0137362_10387538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1210	Open in IMG/M
3300012205\|Ga0137362_10612242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	939	Open in IMG/M
3300012206\|Ga0137380_11166149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300012207\|Ga0137381_10113291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2310	Open in IMG/M
3300012207\|Ga0137381_11652010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300012209\|Ga0137379_11821089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300012211\|Ga0137377_10191055	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300012211\|Ga0137377_11886418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300012349\|Ga0137387_10656395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300012357\|Ga0137384_10469217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1035	Open in IMG/M
3300012361\|Ga0137360_10638671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	912	Open in IMG/M
3300012361\|Ga0137360_11552237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300012362\|Ga0137361_10459176	All Organisms → cellular organisms → Bacteria → PVC group	1170	Open in IMG/M
3300012411\|Ga0153880_1277667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300012469\|Ga0150984_119791836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300012683\|Ga0137398_10261174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300012685\|Ga0137397_10016403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	5178	Open in IMG/M
3300012685\|Ga0137397_10105436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2069	Open in IMG/M
3300012922\|Ga0137394_10132963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2112	Open in IMG/M
3300012922\|Ga0137394_10148949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1991	Open in IMG/M
3300012923\|Ga0137359_11085306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300012925\|Ga0137419_11454976	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012944\|Ga0137410_10464488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1029	Open in IMG/M
3300013307\|Ga0157372_10500241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1417	Open in IMG/M
3300014490\|Ga0182010_10695048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300014494\|Ga0182017_10102800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1871	Open in IMG/M
3300014494\|Ga0182017_10132498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1619	Open in IMG/M
3300014502\|Ga0182021_10472579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1493	Open in IMG/M
3300014502\|Ga0182021_10678233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1235	Open in IMG/M
3300014502\|Ga0182021_10886524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1072	Open in IMG/M
3300014502\|Ga0182021_11157336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	932	Open in IMG/M
3300014638\|Ga0181536_10463656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300014839\|Ga0182027_10005882	All Organisms → cellular organisms → Bacteria	18521	Open in IMG/M
3300014839\|Ga0182027_10033058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	6696	Open in IMG/M
3300014839\|Ga0182027_10155719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2687	Open in IMG/M
3300014839\|Ga0182027_10923571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300014839\|Ga0182027_11834473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300015264\|Ga0137403_10823068	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300015359\|Ga0134085_10580036	Not Available	520	Open in IMG/M
3300017929\|Ga0187849_1005164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	10494	Open in IMG/M
3300017940\|Ga0187853_10303328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300017941\|Ga0187850_10001021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	32535	Open in IMG/M
3300017959\|Ga0187779_10759337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300018018\|Ga0187886_1209688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300018024\|Ga0187881_10238426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300018025\|Ga0187885_10262712	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300018086\|Ga0187769_11354605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300020140\|Ga0179590_1031410	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300020583\|Ga0210401_10042866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4284	Open in IMG/M
3300021406\|Ga0210386_10444485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1119	Open in IMG/M
3300021479\|Ga0210410_10628954	Not Available	952	Open in IMG/M
3300024288\|Ga0179589_10028393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1938	Open in IMG/M
3300025481\|Ga0208079_1002465	All Organisms → cellular organisms → Bacteria	9078	Open in IMG/M
3300025495\|Ga0207932_1005600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4040	Open in IMG/M
3300025812\|Ga0208457_1074930	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300026540\|Ga0209376_1266494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300026552\|Ga0209577_10471187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	858	Open in IMG/M
3300027516\|Ga0207761_1099419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300032069\|Ga0315282_10064510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3707	Open in IMG/M
3300032070\|Ga0315279_10221122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1449	Open in IMG/M
3300032893\|Ga0335069_10231994	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300032893\|Ga0335069_11436441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300032896\|Ga0335075_10001722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	35714	Open in IMG/M
3300033402\|Ga0326728_10508111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	976	Open in IMG/M
3300033798\|Ga0334821_125984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300034195\|Ga0370501_0264121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.73%
Aquatic	Environmental → Aquatic	16.35%
Plants	Host-Associated → Plants	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.88%
Freshwater	Environmental → Aquatic → Freshwater	13.46%
Peat	Environmental → Terrestrial → Peat	3.85%
Marine	Environmental → Aquatic → Marine	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.88%
Lake	Environmental → Aquatic → Freshwater → Lake	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Ice	Environmental → Aquatic → Freshwater → Ice	0.96%
Loam	Environmental → Terrestrial → Soil → Loam	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.88%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.54%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	11.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.88%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.88%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.88%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012411	Freshwater microbial communities from Lake Alinen Mustaj?rvi, Finland - AM7a metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033798	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03859940	2088090014	Soil	VQIGGVKTSIDLDDELADEVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPEGYFAEAYRRYPKERLELEDAAAKTKTGPDR
JGI1027J12803_1000128823	3300000955	Soil	VQIGGVKTSIDLDDELADEVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPEGYFAEAYRRYPKERLELEDAAAKTKTGPDR*
JGIcombinedJ13530_1029454401	3300001213	Wetland	MRTSLSLDSDLEKEVEATASLVREKPATVIRLALRAGLPVVASRFQAARPVGYFASAYPLPRQRQILEKAMAAQKQRPER*
JGIcombinedJ13530_1067918972	3300001213	Wetland	MKRSIDLDVELAAEVDKAASLVGEKPATVIRLAIRAGLPAVTVRFQGSRPEGYFAEAYRDYPKERLELEAAFAKAKIGP
JGIcombinedJ13530_1069522022	3300001213	Wetland	VPIAFANTSGWVQIGAVKTSVDLDDDLALEVNKTVELVKEKSATVLRMAIRAGLPLVANRFQSPRPEGFFADAYRSHPERSRLEQAMAKTEQRPER*
Ga0066685_106598472	3300005180	Soil	MKASVELDDDLAAEVKRTVSLTREKPAAVLRMAIRAGLPIVANRFQAPTSDGYFADAYRNYPKERVEFEEKMAKATVQKPER*
Ga0066704_105845632	3300005557	Soil	IGDMKTSVDLDDELAAEVERTVSLTREKPATVLRMAIRAGLPIVANRHQAPRPEGYFAKVYRRWPKERLELESAFAKLKTGPDR*
Ga0066699_109869332	3300005561	Soil	MKTSIDLDEGLAAEVKETVSVTHEKPATVLRMAIRAGLPIVRNRLQAPRPEGYFAAAYRNYPKERLQLEAAFAKAK
Ga0066702_108818241	3300005575	Soil	MKTSIDLDDELAAEVRETVSVTREKTATVLRMAIRAGLPVVKNRLQTPRPEGYFAAAYRKYPKERLQLEAAFGSA*
Ga0066656_105316032	3300006034	Soil	MVLLALNWQKMGVSRTYWVQTSSMKTSIDLDENLAAEVKEMVSITREKAATVLRMAIRAGLPVVRNRLQNPRPEGYFAAAYRSYPKERLRLETAFAKSKTGPDR*
Ga0066652_1008998643	3300006046	Soil	MKTSVDLDDDLAAEVKRTADLTHENPATVLRMAIRAGLPIVANQAAAPRPEGYFAEMYRNWPKERLELEEGFSNEKVWPERPEE*
Ga0097691_10175828	3300006055	Arctic Peat Soil	VKTSVDLDPELQDAVDKTVSLVREKPATVLRMAIRAGLPLIASRFQAPRPEGYFAGDYPLPDDRLALEAAMASLPQSPDR*
Ga0066659_107923751	3300006797	Soil	MKTSIDLDEGLAAEVKETVSVTHEKPATVLRMAIRAGLPIVRNRLQAPRPEGYFAAAYRNYPKERLQLEAAFAKAKAGPDR*
Ga0066660_111516981	3300006800	Soil	MSLALRTFWVQTGCMKTSIDLDEGLAAEVKETVSVTHEKPATVLRMAIRAGLPIVRNRLQAPRPEGYFAAAYRNYPKERLQLEAAFAKAKAGPDR*
Ga0099791_106788422	3300007255	Vadose Zone Soil	VQIGGVKTSIDLDEELADEVERTVSLTREKAATVLRMAISAGLPIVANRFQAPRPDGYFAEAYRRYPKERLELE
Ga0099794_102881652	3300007265	Vadose Zone Soil	VQFGDMKTSVDQDDELAAEVKRTVSLTREKPATVIRMAIRAGLPIVANRHQAPRPEGYFADAYRRWPKERLELEAAFAKLKTGPDR*
Ga0066710_1007822822	3300009012	Grasslands Soil	MKTSIDLDEDLAADVKEMVSITREKAATVLRMAIRAGLPVVRNRLQNPRPEGYFPAAYRSYPKERLRLETAFAKSKTGPDR
Ga0066710_1009369103	3300009012	Grasslands Soil	MKTSIDLDDELAAAVKETVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYRKYPKERLQLEAAFGKAKTGPDR
Ga0066710_1015678463	3300009012	Grasslands Soil	MKTSIDLDDELAAEVKQTVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYRNYPKERLKLEAAFGRAKSGPDR
Ga0066710_1032222902	3300009012	Grasslands Soil	VQIGSMKTSIDLDDELAAEVKETVSATREKAATVLRMAIRAGLPVVRNRLQAPRPEGYFAAGYRNYPKERLQLETAFTKGKSGPDR
Ga0099829_110412772	3300009038	Vadose Zone Soil	MKINVDLDDELAAEVERTVSLTREKPATVLRMAIRAGLPIVANRHQAPRPEGYFAETYRRWPKERLKLEAAFAKLKSGPDR*
Ga0066709_1005833613	3300009137	Grasslands Soil	MKTSIDLDDELAAAVKETVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYRKYPKERLQLEAAFGKAKTGPDR*
Ga0116107_10060802	3300009548	Peatland	MKTSVDLDDELAAEVRNAVSLTREKPATVLRMAIRAGLPVVTSRFQGPRPEGYFADAYRKYPKERLEFEEAMARGIIQKPER*
Ga0116138_10920981	3300009552	Peatland	MKTSVDLDDELAAEVRNAVSLTREKPATVLRMAIRAGLPAVTSRFQAPRPEGYFADAYRNYPKHRLEFEQAMAKGAARKPER*
Ga0134071_102883201	3300010336	Grasslands Soil	LAENGCLKNLLGANYSSSMKTSIDLDEDLAAEVKETVSITREKAATVLRMAIWAGLPIVRNRLQNPRPEGYFAAAYRSYPKERLRLETAFAKAKTGPDR*
Ga0074046_101744182	3300010339	Bog Forest Soil	MKTSIDLDDELAAEVQEAVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYGNYPKERLQLEAAFGKTKTGPDR*
Ga0126379_111009552	3300010366	Tropical Forest Soil	MKTSVDLDRELSAEVRRTAKLIKEKPATVLRMAIRAGLPVVANRHQAPRPEGYFADTYTKWPEERLALEDAAALTPTGPDRADQ*
Ga0126381_1049492001	3300010376	Tropical Forest Soil	MKTSVDLDPETQAEVERTVELIREKPATVLRMAIRAGLPIVANRHQAERPEGYFSDAYPLPKERQELEKAMSGSQQRPER*
Ga0137392_112898492	3300011269	Vadose Zone Soil	MKINVDLDDELAAEVERTVSLTREKPATVLRMAIRAGLPIVANRHQAPRPEGYFAETYRRWSKERLKLEAAFAKLKSGPDR*
Ga0137391_112284402	3300011270	Vadose Zone Soil	MKTSVDLDDELAAEVKRTVSLTREKPAAVLRMAIRAGLPIVANRFQAPRPDGYFADAYRNYPNERVEFEEKMAKATAQKPER*
Ga0137393_111009801	3300011271	Vadose Zone Soil	MSNGLALRTCWVQIGSMKTSIDLDDELAAEVKETVSATREKPATVLRMAIRAGLPLVRNRLQAPRPEGYFAGAYRNYPKERLQLEAAFTKAKTGPDR*
Ga0136632_104555462	3300012093	Polar Desert Sand	MGSANQIVSMKTNVDLDPDLAAEVERTVSLIHEEPSTVLRMAIRAELPLVVSSFQSSRPEGYFSEAYRDMPEERVALENSFANRF*
Ga0137389_117340022	3300012096	Vadose Zone Soil	MKTSVDLDDELAAEVERTVSLTREKPATVLRMAIRAGLPIVANRHQALRPEGYFAETYRRWPKERLKLEAAFAKLKSGPDR*
Ga0137363_100269443	3300012202	Vadose Zone Soil	MKTSIDLDDELADEVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPEGYFSEAYRHYPKERLELENAAAKTKTGPDR*
Ga0137363_108066032	3300012202	Vadose Zone Soil	MKINVDLDDELAAEVERTVSLTREKPATVLRMAIRAGLPIVANRHQAPRPEGYFAETYRRWPNERLKLEAAFAKLKSGPDR*
Ga0137362_103443062	3300012205	Vadose Zone Soil	MKRSIDLDEALAAEVDSTASLVGEKPSIVMRLAIRAGFPAVANRFQAPRPEGYFADAYKNCPRERREFEEAMAKSTTQRPER*
Ga0137362_103875383	3300012205	Vadose Zone Soil	MKTSVDLDDELAAEVKLTVSLTREKPAAVLRMAIRAGLPIVANRFQAPRPDGYFADAYRNYPKERVEFEEKMAKATVQKPER*
Ga0137362_106122421	3300012205	Vadose Zone Soil	MKTSVELDDELAAEVKRTVALTREKPAAVLRMAIGAGLPIVASRFQAPRPDGYFADAYRNYPKDRVE
Ga0137380_111661491	3300012206	Vadose Zone Soil	DMKTSVDLDDDLAAEVQRTVSLTRENAATILRMAIRAGLPVVANRHQAPRPDGYFAEAYCRWPKERLKLEAAFAELKTGLDR*
Ga0137381_101132913	3300012207	Vadose Zone Soil	MKTSIDLDDELAAAVKETVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYRKYPKERLHLEAAFGKAKTGPDR*
Ga0137381_116520101	3300012207	Vadose Zone Soil	VKIGNVKISVYLDDELAAELERLVSLTGEEPATILRMAVRAGLPIVVNRHQAPRPEGYFARTYRRWPNERLELEAAFTKLKPVSDR*
Ga0137379_118210891	3300012209	Vadose Zone Soil	GLPWLRRQCPRERENGLASSPCWVQSGAMKTSIDLDDELAAAVKETVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYRKYPKERLQLEAAFGKAKTGPDR*
Ga0137377_101910553	3300012211	Vadose Zone Soil	MKTSIDLDDELAAEVNQTVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYRNYPKERLKLEAAFGRAKSGPDR*
Ga0137377_118864181	3300012211	Vadose Zone Soil	MKTSVDLDDELAAEVERTVSLTREKPATVLRMAIRAGLPIVANRHQAPRPDGYFAEAYRRWPKERLELEAAFAKLKTGPDR
Ga0137387_106563951	3300012349	Vadose Zone Soil	MKTSIDLDDELAAEVKETVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYRKYPKERLQLEAAFGKAKAGPDR*
Ga0137384_104692172	3300012357	Vadose Zone Soil	MKTSVDLDEDLAAEVERTVSLTHEKSATVLRMAIRAGLPVVASRFQAPRPEGYFADAYRKAPKERLDFEDKMAKATIQKPER*
Ga0137360_106386712	3300012361	Vadose Zone Soil	MKRSIDLDEALAAEVDSTASLVGEKPSIVMRLAIRAGFPAVANRFQAPQPEGYFADAYKNCPRERREFEEAMAKSTTQRPER*
Ga0137360_115522372	3300012361	Vadose Zone Soil	QVKETVSVTREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAGAYRNYPKERLQLEAAFTKAKTGPDR*
Ga0137361_104591763	3300012362	Vadose Zone Soil	ERSTTVGERFDRSCGGLQNASMKTSVELDDELAAEVKRTVALTREKPAAVLRMAIGAGLPIVASRFQAPRPDGYFADAYRNYPKDRVEFEEKMAKAAAQKPER*
Ga0153880_12776673	3300012411	Freshwater Sediment	VELDEELTAQVSETVELMREKPATILRMAIRAGLPVVRSRFQEPRPEGYFADAYKHYPAERVELEKAMAEEIQRPER*
Ga0150984_1197918361	3300012469	Avena Fatua Rhizosphere	LDDDLAAEVKETVSVTREKPATVLRMAIRAGLPVVRNRLQMPRPDGYFTAAYRNYPKERLDREAAFAKSKTGPDR*
Ga0137398_102611741	3300012683	Vadose Zone Soil	KTSIDLDDELADEVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPDGYFSEAYRHYPKKRLELENAATKTKTGPDR*
Ga0137397_100164032	3300012685	Vadose Zone Soil	VQIGGVKTSIDLDDELADEVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPDGYFSEAYRHYPKERLELENAAAKTKTGPDR*
Ga0137397_101054362	3300012685	Vadose Zone Soil	VQIGGVKTSIDLDEELADEVERTVSLTREKAATVLRMAIRAGLPIVANRFQAPRPDGYFAEAYRRYPKERLELESAFAKTKTGPDR*
Ga0137394_101329631	3300012922	Vadose Zone Soil	THWVQIGGVKTSIDLDEELADEVERTVSLTREKAATVLRMAIRAGLPIVANRFQAPRPDGYFAEAYRRYPKERLELESAFAKTKTGPDR*
Ga0137394_101489493	3300012922	Vadose Zone Soil	MKTSIDLDDELAAEVKETVSATREKPATVLRMAIRAGLPVVRNRLQAPRPEGYFAAAYRNYPKERLKLEAAFGRAKSGPDR*
Ga0137359_110853062	3300012923	Vadose Zone Soil	MKTSVDLDDELAAEVERTVSLTREKPATVLRMAIRAGLPIVANRHQAPRPDGYFAEAYRRWPKERLELEAAFAKLKPVSDR*
Ga0137419_114549762	3300012925	Vadose Zone Soil	VQIGGVKTSIDLDDELADKVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPEGYFAEAYRHYPKERLELENA
Ga0137410_104644882	3300012944	Vadose Zone Soil	MKTSVDLDDELAAEVERTVSLTREKPATILRMAIRAGLPIVANRHQAPRPEGYFAETYRRWPKERLELESAFAKLKTGPDR*
Ga0157372_105002412	3300013307	Corn Rhizosphere	MKTSVDLDDELAAEVERTVSLTKGKPATVLSLAFRAGLPIVANRHQEPRPDGYFSEAYRHWPKDRLELEVSFAKTKTGPDQ*
Ga0182010_106950481	3300014490	Fen	MKTSVDLDDELQADVAKTVELVREKPATVLRLAIRAGLPLVASRFQSPRPEGYFADAYPLPQERLKLENAMSKQTQRP
Ga0182017_101028003	3300014494	Fen	MKTSVDLDDELQADVAKTVELVREKPATVLRLAIRAGLPLVASRFQSPRPEGYFADAYPLPQERLKLENAMSKQTQRPER*
Ga0182017_101324985	3300014494	Fen	MKTSVDLDEDTQTEVEKTVELIREKPATVLRLAIRAGLPLVASRFQAARPEGYFADAYPQPKERQELEAAMGAGKQRPER*
Ga0182021_104725791	3300014502	Fen	MKTSVDLDKDTQAEVDRTVDLVREKPATVLRLAIRAGLPVVASRFQAQRPEGYFADAYPQPKNRQELESAMSGTKQRPER*
Ga0182021_106782333	3300014502	Fen	MKLACGTFWVQIGAVKTSVDLDDELQADVAKTVALVREKPATVLRLAIRAGLPLVASRFQSPRPEGYFTDAYPLPQGRRELEKAMSKQTQRPER*
Ga0182021_108865241	3300014502	Fen	VVQIGAVRTSVYLDKETVSELERAVDRIKEKPATVLRLAIRAGLPLVAGRFQAPRPEGYFADAYPQPNERRELEAAMGRAKQRPER*
Ga0182021_111573362	3300014502	Fen	VKTSVDLDPELQDEVDKTVSLVREKPATVLRMAIRAGLPLIASRFQAPRPEGYFAGDYPLPDDRLALEAAMANLPQSPDR*
Ga0181536_104636561	3300014638	Bog	MGVKKVQIGDVKTSVDLDDETQAEVDRTVELVRERPATVLRLAIRAGLPIVASRHQAERPAGYFSDDYPGPKERQELESAMTELKQRPER*
Ga0182027_100058827	3300014839	Fen	VQIGAVKTSVDLDDELQADVARTVELVREKPATVLRLAIRAGLPLVASRFQSPRPEGYFADAYPLPQERLELENAMSKQTQRPER*
Ga0182027_100330586	3300014839	Fen	VQIGAVKTSVDLDDELQADVAKTVELVREKPATVLRLAIRAGLPLVASRFQSPRPEGYFADAYPLPQERQKLENAMSKQTQRPER*
Ga0182027_101557192	3300014839	Fen	VYQQLASLRELAVRENVQIELAHGTFWVQIGAMKTSVDLDDELQADVAKTVELVREKPATVLRLAIRAGLPLVASRFQSPRPEGYFADAYPLPQERQKLENAMSKQTQRPER*
Ga0182027_109235712	3300014839	Fen	MKTSVDLDEDTQAEVDKTVELIREKPATVLRLAIRAGLPVVASRFQAPRPEGYFADAYPQPKERQELEAAMSGAKQRPER*
Ga0182027_118344731	3300014839	Fen	VVQIGAVRTSVYLDKETESELERAVDRIKEKPATVLRLAIRAGLPLVAGRFQAPRPEGYFADAYPQPNERRELEAAMGTAKQRPER*
Ga0137403_108230682	3300015264	Vadose Zone Soil	VQIGGVKTSIDLDDELAEEVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPEGYFAEAYRHYPKERLELENAAAKTKTGPDR*
Ga0134085_105800361	3300015359	Grasslands Soil	LLALNWQKMGVSRTYWVQTGSMKTSIDLDENLAAEVKEMVSITREKAATVLRMAIRAGLPVVRNRLQNPRREGYFAAAYRSYPKERLRLETAFAKSKTGPDR*
Ga0187849_10051648	3300017929	Peatland	MKTSVDLDDELAAEVRNAVSLTREKPATVLRMAIRAGLPVVTSRFQGPRPEGYFADAYRKYPKERLEFEEAMARGIIQKPER
Ga0187853_103033282	3300017940	Peatland	MKTSVDLDDELAAEVRNAVSLTREKPATVLRMAIRAGLPVVTSRFQGPRPEGYFADSYRKYPKERLEFEEAMARGIIQKPER
Ga0187850_1000102119	3300017941	Peatland	MKTSVDLDDELAAEVRNAVSLTREKPATVLRMAIRAGLPAVTSRFQAPRPEGYFADAYRNYPKHRLEFEQAMAKGAARKPER
Ga0187779_107593371	3300017959	Tropical Peatland	MKTSVDLDDELHAEVRRTVSLVREKAATVLRLAIRAGLPLVASRFQAPRPAGYFADDYPLPRERIELERAMARGRQQPE
Ga0187886_12096881	3300018018	Peatland	MKTSVDLDEELAAEVRNAVSLTREKPATVLRMAIRAGLPVVTSRFQAPRPEGYFADAYRAYPKERLEFEEAMAKGTIQKPER
Ga0187881_102384262	3300018024	Peatland	MKTSVDLDDELAAEVRNAVSLTREKPATVLRMAIRAGLPAVTGRFQAPRPEGYFAGAYRHYPKGRLEFE
Ga0187885_102627122	3300018025	Peatland	WVQDEVMKTSVDLDEELAAAVRNAVALTREKPATVLRMAIRAGLPVVTSRFQGPRPEGYFADAYRKYPKERLEFEEAMARGIIQKPER
Ga0187769_113546052	3300018086	Tropical Peatland	MRTSIDLDDALAAEVNNTVSLIGEKPATVLRLAIQAGLPIVANRFQAPRPEGYFKSCYPPRKEQLELENAMAKSGGGPDRIE
Ga0179590_10314102	3300020140	Vadose Zone Soil	VQIGGVKTSIDLDDELADEVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPDGYFSEAYRHYPKERLELENAAAKTKTGPDR
Ga0210401_100428663	3300020583	Soil	VQIGSVKTSVDLDPDTQAEVERTVELIREKPATVLRMAIRAGLPIVANRHQAERPEGYFSDAYPLPRERQQLEAAMSDTQQRPER
Ga0210386_104444851	3300021406	Soil	VQIGSVKTSVDLDPDTQAEVERTVELIREKPATVLRMAIRAGLPIVANRHQAERPEGYFSDAYPLPRERQQLEAAMSDT
Ga0210410_106289543	3300021479	Soil	VDLDEDLAAEVERTVSLTHEKPATVLRMAIRAGLPLVANRFQTPRPEGYFANSYRNGPKERLEFEEKMAKATLQKPER
Ga0179589_100283931	3300024288	Vadose Zone Soil	GGVKTSIDLDDELADEVERTVSLTREKPATVLRMAIRAGLPIVANRFQAPRPDGYFSEAYRHYPKERLELENAAAKTKTGPDR
Ga0208079_100246511	3300025481	Arctic Peat Soil	VKTSVDLDPELQDAVDKTVSLVREKPATVLRMAIRAGLPLIASRFQAPRPEGYFAGDYPLPDDRLALEAAMASLPQSPDR
Ga0207932_10056006	3300025495	Arctic Peat Soil	VKTSVDLDPELQDEVDKTVSLVREKPATVLRMAIRAGLPLIASRFQAPRPEGYFAGDYPLPDDRLALEAAMASLPQSPDR
Ga0208457_10749301	3300025812	Peatland	AMKTSVDLDDELAAEVRNAVSLTREKPATVLRMAIRAGLPVVTSRFQGPRPEGYFADAYRKYPKERLEFEEAMARGIIQKPER
Ga0209376_12664942	3300026540	Soil	MKASVELDDDLAAEVKRTVSLTREKPAAVLRMAIRAGLPIVANRFQAPTSDGYFADAYRNYPKERVEFEEKMAKATVQKPER
Ga0209577_104711871	3300026552	Soil	MSLALRTFWVQTGCMKTSIDLDEGLAAEVKETVSVTHEKPATVLRMAIRAGLPIVRNRLQAPRPEGYFAAAYRNYPKERLQLEAAFAKAKAGPDR
Ga0207761_10994192	3300027516	Tropical Forest Soil	MKTSIDLDDELAAEVKETVSVTREKPATVLRMAIRAGLPVVRNRLQAPRPDGYFAAGYRNYPKERLELEAAFGKVTTGPDR
Ga0315282_100645104	3300032069	Sediment	MKTSVDLDDELAAEVRNAVSLTREKPATVLRMAIRAGLPAVTSRFQAPRPEGYFADAYRNYPKERLEFEQAMAKGTAQKPER
Ga0315279_102211224	3300032070	Sediment	MKRSIDLDATLSSEVERAAELVGEKPATILRLAIRAGLPIVTGRFQAPRPEGYFADAYDRYPQERLALEAAFSRLERLELSKCRW
Ga0335069_102319944	3300032893	Soil	MKTSVDLDAETQKELKRVTDLVKEKPATVLRLAIRSGLPVVASRFQAPRPEGYFADAYPQPKERRELESAMAGAKQRPER
Ga0335069_114364412	3300032893	Soil	NGSMKTSVDLDAELAAEVKRTVSLTREKPAAVLRMAIRAGLPIVANRFQAPRPDGYFADAYLKYPKPRLEFEEKMAKAVVQTPER
Ga0335075_1000172212	3300032896	Soil	MKTSVDLDPDTQAEVERTVELIREKPATVLRMAIRAGLPIVANRHQAARPEGFFSDAYPLPGERQKLERAMSENEQRLER
Ga0326728_100868151	3300033402	Peat Soil	LCFKGGKVEFTTGRVQNEAMKTSVDLDEELAAAVRNAVSLTQEKPATVLRMAIRAGLPAVTSRFQATRPEGYFASAYRNYPKGRLEFEEAMARGTIQKPER
Ga0326728_105081112	3300033402	Peat Soil	MKTSVDLDEELAAAVRSAVSLTREKPATVLRMAIRAGLPAVTSRFQAPRPEGYFAGAYRSYPKGRLEFEEAMAKGSIQKPER
Ga0326728_112090901	3300033402	Peat Soil	KRSEEEVEFITGWVQNEPMKTSVDLDDELAAEVQTAVSLTREKPATVLRMAIRAGLPVVTSRFQAPRPEGYFAGVYRKYPKERRDFEEAMAFWTSASCIRR
Ga0334821_125984_311_508	3300033798	Soil	MKTSVDLDDELQADVAKTVELVREKPATVLRLAIRAGLPLVASRFQSPRPEGYFADAYPLPQERLK
Ga0370501_0264121_338_616	3300034195	Untreated Peat Soil	MKLACGTFWVQIGAVKTSVDLDDELQADVAKTVELVREKPATVLRLAIRAGLPLVASRFQSPRPEGYFADAYPLPQERRKLENAMSKQTQRPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096959

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences