Metagenome / Metatranscriptome Family F096953

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096953
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	79 residues
Representative Sequence	ANALVTYESDLYRALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Number of Associated Samples	80
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.96 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (54.808 % of family members)
Environment Ontology (ENVO)	Unclassified (65.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (57.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.13% β-sheet: 0.00% Coil/Unstructured: 68.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13483	Lactamase_B_3	11.54
PF00561	Abhydrolase_1	2.88
PF01227	GTP_cyclohydroI	1.92
PF13180	PDZ_2	0.96
PF00067	p450	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.65 %
Unclassified	root	N/A	15.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	11.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.69 %
Unclassified	root	N/A	15.38 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	11.54 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	11.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	11.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.96 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Fortieaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae	11.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
Roholtiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella	11.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
unclassified Roholtiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella	11.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.38 %
aff. Roholtiella sp. LEGE 12411	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	11.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.88 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003351\|JGI26346J50198_1003714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1429	Open in IMG/M
3300005332\|Ga0066388_108682367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300005363\|Ga0008090_14994584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300005363\|Ga0008090_15029046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300005556\|Ga0066707_10834247	Not Available	568	Open in IMG/M
3300005764\|Ga0066903_104892051	Not Available	712	Open in IMG/M
3300006797\|Ga0066659_11300493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300006797\|Ga0066659_11853165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300007258\|Ga0099793_10067055	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300009038\|Ga0099829_10899198	Not Available	735	Open in IMG/M
3300010048\|Ga0126373_11227231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300010154\|Ga0127503_10387600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300010361\|Ga0126378_12941925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300010376\|Ga0126381_100221315	All Organisms → cellular organisms → Bacteria	2545	Open in IMG/M
3300010398\|Ga0126383_12931649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300011120\|Ga0150983_15898918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300012361\|Ga0137360_11149907	Not Available	671	Open in IMG/M
3300012948\|Ga0126375_10522292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300016270\|Ga0182036_11022948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300016319\|Ga0182033_10072929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	2426	Open in IMG/M
3300016319\|Ga0182033_10207920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1562	Open in IMG/M
3300016341\|Ga0182035_10838603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	808	Open in IMG/M
3300016341\|Ga0182035_11451635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300016371\|Ga0182034_10010197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5234	Open in IMG/M
3300016371\|Ga0182034_11331711	Not Available	627	Open in IMG/M
3300016371\|Ga0182034_11371639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300016404\|Ga0182037_10262093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1373	Open in IMG/M
3300016445\|Ga0182038_11201966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300016445\|Ga0182038_12184591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300017823\|Ga0187818_10176788	Not Available	931	Open in IMG/M
3300018482\|Ga0066669_10705035	Not Available	889	Open in IMG/M
3300021178\|Ga0210408_10203677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1574	Open in IMG/M
3300021178\|Ga0210408_11248069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300021478\|Ga0210402_10122290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2353	Open in IMG/M
3300021478\|Ga0210402_10518977	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300021560\|Ga0126371_13507272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300022724\|Ga0242665_10044564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1156	Open in IMG/M
3300027783\|Ga0209448_10007573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3429	Open in IMG/M
3300031122\|Ga0170822_12297853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300031128\|Ga0170823_14627316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300031446\|Ga0170820_16014286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1018	Open in IMG/M
3300031469\|Ga0170819_11117925	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300031469\|Ga0170819_11830138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300031545\|Ga0318541_10113538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1465	Open in IMG/M
3300031549\|Ga0318571_10353849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300031561\|Ga0318528_10472380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300031564\|Ga0318573_10773935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300031572\|Ga0318515_10165564	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300031572\|Ga0318515_10427037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300031640\|Ga0318555_10062581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1911	Open in IMG/M
3300031668\|Ga0318542_10033130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2242	Open in IMG/M
3300031668\|Ga0318542_10572156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300031682\|Ga0318560_10441782	Not Available	704	Open in IMG/M
3300031682\|Ga0318560_10731482	Not Available	535	Open in IMG/M
3300031708\|Ga0310686_111690111	All Organisms → cellular organisms → Bacteria	3303	Open in IMG/M
3300031713\|Ga0318496_10356988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300031736\|Ga0318501_10257387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	924	Open in IMG/M
3300031744\|Ga0306918_10873722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300031747\|Ga0318502_10127424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1435	Open in IMG/M
3300031747\|Ga0318502_10655320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300031763\|Ga0318537_10128785	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031764\|Ga0318535_10571517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300031770\|Ga0318521_10063447	All Organisms → cellular organisms → Bacteria → Proteobacteria	1946	Open in IMG/M
3300031777\|Ga0318543_10018354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2583	Open in IMG/M
3300031777\|Ga0318543_10078758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1393	Open in IMG/M
3300031777\|Ga0318543_10185267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M
3300031779\|Ga0318566_10674314	Not Available	501	Open in IMG/M
3300031780\|Ga0318508_1024480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1492	Open in IMG/M
3300031793\|Ga0318548_10196304	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300031798\|Ga0318523_10158936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300031798\|Ga0318523_10246680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300031823\|Ga0307478_11270963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300031832\|Ga0318499_10318067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300031833\|Ga0310917_10154095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1518	Open in IMG/M
3300031845\|Ga0318511_10221635	Not Available	844	Open in IMG/M
3300031890\|Ga0306925_10670642	Not Available	1088	Open in IMG/M
3300031896\|Ga0318551_10087403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Fortieaceae → Roholtiella → unclassified Roholtiella → aff. Roholtiella sp. LEGE 12411	1641	Open in IMG/M
3300031910\|Ga0306923_10928242	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031942\|Ga0310916_10354360	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300031942\|Ga0310916_10606589	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300031942\|Ga0310916_11331076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300031945\|Ga0310913_10381412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300031945\|Ga0310913_10464360	Not Available	899	Open in IMG/M
3300031945\|Ga0310913_10594530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300031954\|Ga0306926_11618585	Not Available	742	Open in IMG/M
3300031962\|Ga0307479_10024981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5661	Open in IMG/M
3300031962\|Ga0307479_11850020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300032009\|Ga0318563_10808371	Not Available	502	Open in IMG/M
3300032010\|Ga0318569_10597041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300032025\|Ga0318507_10532477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300032041\|Ga0318549_10046046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1785	Open in IMG/M
3300032043\|Ga0318556_10076658	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300032054\|Ga0318570_10420153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300032059\|Ga0318533_10433637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300032060\|Ga0318505_10151216	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1076	Open in IMG/M
3300032063\|Ga0318504_10109055	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300032063\|Ga0318504_10225162	Not Available	879	Open in IMG/M
3300032065\|Ga0318513_10340212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300032066\|Ga0318514_10218472	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300032066\|Ga0318514_10430048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300032068\|Ga0318553_10776384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300032076\|Ga0306924_10051927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4527	Open in IMG/M
3300033289\|Ga0310914_10051845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3386	Open in IMG/M
3300033290\|Ga0318519_10317276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.15%
Aquatic	Environmental → Aquatic	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.15%
Freshwater	Environmental → Aquatic → Freshwater	3.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	77.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	54.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26346J50198_10037141	3300003351	Bog Forest Soil	IIVNLPKNEQVANTLVTYESDLYRALKNTGSIAPGSPKLPAASLQGGTAEAAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG*
Ga0066388_1086823671	3300005332	Tropical Forest Soil	VGLPKNQQVANAVVTYESDLYRALKNTGPLASGSARNTTGSPRAETIEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG*
Ga0008090_149945842	3300005363	Tropical Rainforest Soil	ESDLYRALKNTGPLASGSARNTTGSPRAETIEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG*
Ga0008090_150290462	3300005363	Tropical Rainforest Soil	SDLYRALKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG*
Ga0066707_108342472	3300005556	Soil	DLYRALRNTGALNAGPTATPAAPTQASTADISPHPIKPLIMGTSNDAQLAAALDYLQKAARQNPSAHNG*
Ga0066903_1048920512	3300005764	Tropical Forest Soil	QQVANAGVTYESDLYRALKNSGSLNPGAGTGPSALPQPGATEASDRPIRPLMMGTASDAQLAAAFDYLQKAVRREGGAHHG*
Ga0066659_113004931	3300006797	Soil	AVATHESDLYRALKNTGSLDPPKGQAALPPAGAAELSEHPIKPLNIGTGNDAQLTAAFDYLQKAVRREAGAHHG*
Ga0066659_118531651	3300006797	Soil	HESDLYRALKNTGSLNPGPGKGQAAPPPAGTAELSEHPIKPLIIGTSNDAQLAAAFDYLQKAVRRDAGAHHG*
Ga0099793_100670551	3300007258	Vadose Zone Soil	LYRALKNTGSLNLSPVKGQAAEPPAGAEDLSEHPIKPLIIGTSNDAQLAAAFDYLQKAVRREAGAHHG*
Ga0099829_108991981	3300009038	Vadose Zone Soil	KNQQVANALVTYESDLYRAFKNAGSLNPGTVKVPSAPPPAGAAEVADRPIKPLMLGTGNDAQLAAAFDYLQKAARREAGAHHG*
Ga0126373_112272312	3300010048	Tropical Forest Soil	TYESDLYRALKNTGPLASGSARNTTGSPRAETIEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG*
Ga0127503_103876001	3300010154	Soil	THESDLYRAIKNTGSLNPSRGRGQAAPPPTGTAELSEHPIKPLIIGTSNDAQLAAAFDYLQRAVRREAGAHHG*
Ga0126378_129419251	3300010361	Tropical Forest Soil	IVVSLPKNQQVANAVVTYESDLYRALKNTGSLGRGPVRNAAVPLQAGTAETAEHPIKPLIIGTNKDAQLDAAVDYLQRAVRGESGAHPG*
Ga0126381_1002213153	3300010376	Tropical Forest Soil	TYESDLYRALKNTGSLAPGSTKPATAPPQAVGEAAEHPIRPLIIGTSGDAQFTAALDYLQKAVRREAGTHHG*
Ga0126383_129316491	3300010398	Tropical Forest Soil	NQQVANAVVTYESDLYRALKNTGPLASGSARNTTGSPRAETIEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG*
Ga0150983_158989181	3300011120	Forest Soil	VVNLPKNQQVANAVATHESDLYRALKNTGSLNPSPVKGQAAEPPAGAEDLSEHPIKPLIIGTSNDAQLAAAFDYLQKAVRREAGAHHG*
Ga0137360_111499071	3300012361	Vadose Zone Soil	TPDVLLALPKDQQVANAVVTFESDLYRALRNTGALNAGPTATPAAPTQASTADIAPHPIKPLIMGTSNDAQLAAALDYLQKAARQNPSAHNG*
Ga0126375_105222921	3300012948	Tropical Forest Soil	NLPKNQQVANALVTYESDLYRALKNTGSLAVGSTQPVAAPQAGAEAAEHPIRPLIIGTSGDAQFTAALDYLQKAVRREAVTHHG*
Ga0182036_110229481	3300016270	Soil	PDIIVSLPKNQQVANALVTYESDLYGALKNVGSLAPGSPKMPAAALQGGTADAAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG
Ga0182033_100729291	3300016319	Soil	KSQQVANALVTYESDLYRALKNTGSLAPGSTKTPSASLQGGTAEAAEHPIKPLIIGTSGDAQFAAALDYLQRAVRREGGVHHG
Ga0182033_102079202	3300016319	Soil	LKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG
Ga0182035_108386031	3300016341	Soil	DIIVNLPKNQQVANALVTYESDLYGALKNTGSLAPGSPKMPAASLSGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0182035_114516351	3300016341	Soil	NQQVANAVVTYESDLYRALKNTGSLAQGPAGSAGVPLQAGSAEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREAGVHHG
Ga0182034_100101978	3300016371	Soil	GIAPDIIVSLPKSQQVANALVTYESDLYRALKNTGSLAPGSAKTPSASLQGGTAEAAEHPIKPLIIGTSGDAQFAAALDYLQRAVRREGGVHHG
Ga0182034_113317111	3300016371	Soil	GIAPDIIVSLPKSQQVANALVTYESDLYRALKNTGSLAPGSTKTPSASLQGGTAEAAEHPIKPLIIGTSGDAQFAAALDYLQRAVRREGGIHHG
Ga0182034_113716391	3300016371	Soil	KNQQVANAVVTYESDLYRAFKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG
Ga0182037_102620931	3300016404	Soil	ALKNTGPLALGSGTHAAGPLRADTTEAAQHPIKPLIIGTSNDAQFAAALDYLQKSVRREVGIHG
Ga0182038_112019661	3300016445	Soil	IIVNLPKNQQVANALVTYESDLYGALKNTGSLAPGSPKMPAASLSGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREAVTHHG
Ga0182038_121845912	3300016445	Soil	IIVNLPKNQQVANALVTYESDLYGALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0187818_101767882	3300017823	Freshwater Sediment	APDIIVNLPKNEQVANALVTYESDLYRALKNTGSLDSAPTQTPPASVQAGTTEPAEHPIKPLIIGTSGDAQFAAALDYLQRAVRREAGIHHG
Ga0066669_107050351	3300018482	Grasslands Soil	NAVATHESDFYRALKNKGSLNPNTGAAPAGLAPAGASELSEHPIKPLIIGTSNDAQLAAAFDYLKKAVRREGGAHHG
Ga0210408_102036771	3300021178	Soil	ANALVTYESDLYRALKNTSSLAPGSTKPPAAPLQAGAEPAEHPIRPLIIGTSGDAQFTAALDYLQKAVRREVGTHHG
Ga0210408_112480692	3300021178	Soil	APDIVVNLPKNQQVANAVATHESDLYRALKNTGSLNPSPVKGQTALPPAGAEDLSEHPIKPLIIGTGNDAQLAAAFDYLQKAVRREAGAHHG
Ga0210402_101222901	3300021478	Soil	PDIVVSLPKNQQVANAVVTYESDLYRALKNTGSLNSSKAPSAPLAGGAVEASERPIKPLIMGTGSDAQLAAAFDYLQKLVRREAGAHHG
Ga0210402_105189771	3300021478	Soil	ALVTYESDLYRALKNTGSLAPGSTNPSAAPPQAGAEPAEHPIRPLIIGTSGDAQFTAALDYLQKAVRQEVGTHHG
Ga0126371_135072721	3300021560	Tropical Forest Soil	YESDLYRALKNTRSLAPGSAKTPTSALAGPAEPAEHPIKPLIIGTNGDAQLAAALNYLQRAVGREGGVHRG
Ga0242665_100445643	3300022724	Soil	NAVATHESDLYRALKNTGSLNPSPVKGQTALPPAGAEDLSEHPIKPLIIGTSNDAQLAAAFDYLQKAVRREAGAHHG
Ga0209448_100075737	3300027783	Bog Forest Soil	YRALKNTGSLDSGPTRTPPTSVQAGTTEPAEHPIKPLIIGTSADAQFATALDYLQRAVRREVGIHHG
Ga0170822_122978532	3300031122	Forest Soil	KNQQVANALVTYESDLYRALKNAGSLGPASTGTPAASLQAGAEPAEHPIRPLIIGTSGDAQFTAALDYLQKAVRREVPTHHG
Ga0170823_146273161	3300031128	Forest Soil	LKNTGSLAPGSTNPPAVPLQAGAEPAEHPIRPLIIGTSADAQFTAALDYLQKAVRREVGTHHG
Ga0170820_160142861	3300031446	Forest Soil	PDMVVNLPKNQQVANALVTYESDLYRALKNTGSLAPGSTQLPAATQQAGTEAAEHPIRPLIIGTSGDAQFTAALDYLQKAVRQEVGTHHG
Ga0170819_111179251	3300031469	Forest Soil	NQQVANALITYESDLYRALKNTGSLAPESAKPATAPLQAGGESAEHPIRPLIIGTSGDAQFTAALDYLQKAVRREAPTHHG
Ga0170819_118301381	3300031469	Forest Soil	PDVLVNLPKNQQVANALVTYESDLYRALKNAGSLGPASTGTPAASLQAGAEPAEHPIRPLIIGTSGDAQFTAALDYLQKAVRREVPTHHG
Ga0318541_101135381	3300031545	Soil	YESDLYRALKNTGSLAQGPAGSAGVPLQAGSAEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREAGVHHG
Ga0318571_103538491	3300031549	Soil	VPDIVVSLPKNQQVANAVVTYESDLYRALKNTGSLAPGPTQGATAPPLAGTSEAAEHPIRPLIIGTSGDAQFAAALDYLQKAVRREVGIHHG
Ga0318528_104723802	3300031561	Soil	ANALVTYESDLYRALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0318573_107739351	3300031564	Soil	DLYRALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0318515_101655641	3300031572	Soil	VTYESDLYRALKNTGSLAQGPARSAGVPLQAGTAEAGEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGVHHG
Ga0318515_104270372	3300031572	Soil	PKNQQVANAVVTYESDLYRALKNTGSLAPGPTQGATAPPLAGTSEAAEHPIRPLIIGTSGDAQFAAALDYLQKAVRREVGIHHG
Ga0318555_100625813	3300031640	Soil	YESDLYGALKNTGSLAPGSPKMPAAALQGGAGDAAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG
Ga0318542_100331302	3300031668	Soil	VVTYESDLYRALKNTGPLASGSAKNATGLLRADTTQAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG
Ga0318542_105721562	3300031668	Soil	AVVTYESDLYRALKNTGPLALGSGTHAAGPLRADTTEAAQHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG
Ga0318560_104417822	3300031682	Soil	PKSQQVANALVTYESDLYRALKNTGSLAPGSTKTPSASLQGGSAEAAEHPIKPLIIGTSGDAQFAAALDYLQRAVRREGGIHHG
Ga0318560_107314821	3300031682	Soil	PKSQQVANALVTYESDLYRALKNTGSLAPGSTKTPSASLQGGTAEAAEHPIKPLIIGTSGDAQFAAALDYLQRAVRREGGVHHG
Ga0310686_1116901116	3300031708	Soil	EQVANALVTYESDLYGALKNTGSLAPALPKMPAASIQGGTAEAAEHPIKPLIIGTSGDAQFTAALDYLQKAVRREAVTHHG
Ga0318496_103569882	3300031713	Soil	IIVNLPKNQQVANALVTYESDLYGALKNTGSLAPGSPKMPAASLPGGAAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0318501_102573871	3300031736	Soil	LPKNQQVANALVTYESDLYGALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0306918_108737222	3300031744	Soil	GIAPDIIVSLPKNQQVANAVVTYESDLYRALKNTGSLAQGPAGSAGVPLQAGSAEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREAGVHHG
Ga0318502_101274241	3300031747	Soil	NQQVANALVTYESDLYRALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0318502_106553201	3300031747	Soil	SLPKNQQVANAVVTYESDLYRALKNTGSLARGPARSGGGPLQAGTAEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGVHHG
Ga0318537_101287852	3300031763	Soil	VTYESDLYRALKNTGSLAPGPTQGATAPPLAGTSEAAEHPIRPLIIGTSGDAQFAAALDYLQKAVRREVGIHHG
Ga0318535_105715172	3300031764	Soil	LYRALKNTGSLARGPARSGGGPLQAGTAEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGVHHG
Ga0318521_100634473	3300031770	Soil	YRALKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG
Ga0318543_100183541	3300031777	Soil	TYESDLYGALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0318543_100787582	3300031777	Soil	YESDLYRAFKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG
Ga0318543_101852672	3300031777	Soil	AFVTYESDLYRALKNTGSLARGPARSGGGPLQAGTAEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGVHHG
Ga0318566_106743142	3300031779	Soil	SDLYGALKNVGSLAPGSPKMPAAALQGGTADAAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG
Ga0318508_10244801	3300031780	Soil	LYGALKNTGSLAPGSPKMPAAALQGGAGDAAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG
Ga0318548_101963042	3300031793	Soil	ANAVVTYESDLYRALKNTGPLASGSAKNATGLLRADTTQAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG
Ga0318523_101589361	3300031798	Soil	IVVSLPKNQQVANAVVTYESDLYRAFKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG
Ga0318523_102466802	3300031798	Soil	YRALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0307478_112709632	3300031823	Hardwood Forest Soil	NALVTYESDLYGALKNTGSLAPGSPKMPAASLPSGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0318499_103180672	3300031832	Soil	TYESDLYRALKNTGPLASGSAKNATGLLRADTTQAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG
Ga0310917_101540951	3300031833	Soil	APDIVVGLPKNQQVANAVVTYESDLYRALKNTGPLALGSGTHAAGPLRADTTEAAQHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG
Ga0318511_102216352	3300031845	Soil	KNTGSLAPGSPKMPAAALQGGAGDAAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG
Ga0306925_106706421	3300031890	Soil	QQVANALVTYESDLYRALKNTGSLGSGSTTAPAASLQAGAEPVEHPIRPLIIGTSSDAQFTAALDYLQRAVRREVPTHHG
Ga0318551_100874031	3300031896	Soil	LYGALKNTGSLAPGSPKMPAAALQGGAGDVAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG
Ga0306923_109282422	3300031910	Soil	AVVTYESDLYRALKNTGSLAPGPTQGATAPPLAGTSEAAEHPIRPLIIGTSGDAQFAAALDYLQKAVRREVGVHHG
Ga0310916_103543601	3300031942	Soil	ANAVVTYESDLYRALKNTGSLAPGPTQGATAPPLAGTSEAAEHPIRPLIIGTSGDAQFAAALDYLQKAVRREVGIHHG
Ga0310916_106065892	3300031942	Soil	QVANAVVTYESDLYRALKNTGSLAQGPARSAGVPLQAGTAEAGEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGVHHG
Ga0310916_113310761	3300031942	Soil	KNQQVANALVTYESDLYRALKNTGSLAVGSTQPIAAPQAGAEAAEHPIRPLIIGTNGDAQFTAALDYLQKAVRREAGTHHG
Ga0310913_103814122	3300031945	Soil	IVVGLPKNQQVANAVVTYESDLYRALKNTGPLASGSAKNATGLLRADTTQAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG
Ga0310913_104643602	3300031945	Soil	ALKNTGSLAPGSPKMPAASLSGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRQEVVTHHG
Ga0310913_105945301	3300031945	Soil	AVVTYESDLYRALKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG
Ga0306926_116185851	3300031954	Soil	ANAVVTYESDLYRALKNTGSLAPVPTGTHAASLQAGNTEPADHPIKPLIIGTSGDAQFSAALDYLQKAVHREMGVHHG
Ga0307479_100249817	3300031962	Hardwood Forest Soil	ALKNTGSLSPGPTKTPAVSQQAGTGEPAEHPIKPLIIGTTGDAQFAAALDYLQKAVRREVGIHRG
Ga0307479_118500202	3300031962	Hardwood Forest Soil	QVANAVATHESDLYRALKNTGSLNPSPVKGQTALPPAGAEDLSEHPIKPLIIGTGNDAQLAAAFDYLQKAVRREAGAHHG
Ga0318563_108083712	3300032009	Soil	TYESDLYGALKNTGSLAPGSPKMPAAALQGGAGDAAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG
Ga0318569_105970412	3300032010	Soil	PKNQQVANAVVTYESDLYRALKNTRSLAQGPARSAGVPLQAGTAEAGEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGVHHG
Ga0318507_105324772	3300032025	Soil	YESDLYRALKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG
Ga0318549_100460463	3300032041	Soil	GQGIVPDIVVSLPKNQQVANGVVTYESDLYRALKNTGSLAPGPTQGATAPPLAGTSEAAEHPIRPLIIGTSGDAQFAAALDYLQKAVRREVGIHHG
Ga0318556_100766581	3300032043	Soil	TYESDLYRALKNTGPLALGSGTHAAGPLRADTTEAAQHPIKPLIIGTSNDAQFAAALDYLQKSVRREVGIHG
Ga0318570_104201531	3300032054	Soil	GQGIVPDIIVSLPKNQQVANAVVTYESDLYRALKNTGSLAPGPTQGATAPPLAGTSEAAEHPIRPLIIGTSGDAQFAAALDYLQKAVRREVGIHHG
Ga0318533_104336372	3300032059	Soil	YRALKNTGSLAVGSTQPIAAPQAGAEAAEHPIRPLIIGTNGDAQFTAALDYLQKAVRREAGTHHG
Ga0318505_101512162	3300032060	Soil	LPQNQQVANAVVTYESDLYRALKNTGSLAPGPTQGATAPPLAGTSEAAEHPIRPLIIGTSGDAQFAAALDYLQKAVRREVGVHHG
Ga0318504_101090552	3300032063	Soil	QQVANALVTYESDLYGALKNTGSLAPGSPKMPAASLPGGAAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0318504_102251622	3300032063	Soil	IAPDIIVSLPKNQRVANALVTYESDLYGALKNTGSLAPGSPKMPAAALQGGAGDAAEHPIKPLIIGTSGDAQFAAALDYLQKAVRREAVTHHG
Ga0318513_103402121	3300032065	Soil	AVVTYESDLYRALKNTGPLASGSAKNATGLLRADTTQAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREVGIHG
Ga0318514_102184721	3300032066	Soil	NAVVTYESDLYRAFKNTGSLAQGPARSAGVPLQGGTAEVAEHPIKPLIIGTGNDAQFAAALDYLQKAVRREVGVHHG
Ga0318514_104300481	3300032066	Soil	TYESDLYRALKNTGPLASGSAKNATGLLRADTTQAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREAGIHG
Ga0318553_107763841	3300032068	Soil	LYGALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG
Ga0306924_100519271	3300032076	Soil	VTYESDLYRALKNTGSLAPGSTKTPSASLQGGTAEAAEHPIKPLIIGTSGDAQFAAALDYLQRAVRREGGVHHG
Ga0310914_100518454	3300033289	Soil	GIAPDIIVSLPKNQQVANAVVTYESDLYRALKNTGSLAQGPARSAGVPLQAGSAEAAEHPIKPLIIGTSNDAQFAAALDYLQKAVRREAGVHHG
Ga0318519_103172761	3300033290	Soil	VNLPKNQQVANALVTYESDLYGALKNTGSLAPGSPKMPAASLPGGTAEAAEHPIKPLIIGTNGDAQFAAALDYLQKAVRREVVTHHG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences