Metagenome Family F096952

Basic Information
Family ID	F096952
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	MIRDLYTSLTAREQRAVRWSAAATAAALWLSTAWADPRFLL
Number of Associated Samples	98
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.50 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.27 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (22.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.654 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.72% β-sheet: 0.00% Coil/Unstructured: 49.28%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04964	Flp_Fap	51.92
PF13560	HTH_31	5.77
PF13416	SBP_bac_8	3.85
PF13641	Glyco_tranf_2_3	1.92
PF07885	Ion_trans_2	0.96
PF00512	HisKA	0.96
PF13517	FG-GAP_3	0.96
PF13632	Glyco_trans_2_3	0.96
PF03167	UDG	0.96
PF02518	HATPase_c	0.96
PF01569	PAP2	0.96
PF11799	IMS_C	0.96
PF00211	Guanylate_cyc	0.96
PF00171	Aldedh	0.96
PF05239	PRC	0.96
PF11139	SfLAP	0.96
PF01557	FAA_hydrolase	0.96
PF01895	PhoU	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	51.92
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.96
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.96
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.96
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.96
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.96
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.96
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.42 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.46 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	79.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	77.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	77.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402ICD73	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
2228664021\|ICCgaii200_c1060076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300001205\|C688J13580_1035664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300003911\|JGI25405J52794_10019165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1370	Open in IMG/M
3300004114\|Ga0062593_102465658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300004153\|Ga0063455_100203405	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300004153\|Ga0063455_100266536	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300004479\|Ga0062595_101103482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300005093\|Ga0062594_103073602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005175\|Ga0066673_10824864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300005335\|Ga0070666_10774134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300005353\|Ga0070669_100774844	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005466\|Ga0070685_10892672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300005549\|Ga0070704_100316676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1305	Open in IMG/M
3300005558\|Ga0066698_10162335	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005563\|Ga0068855_100101004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3321	Open in IMG/M
3300005563\|Ga0068855_100368861	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300005576\|Ga0066708_10558458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300005614\|Ga0068856_100907824	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300005764\|Ga0066903_101821245	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300006028\|Ga0070717_12138321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300006797\|Ga0066659_11324347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300006914\|Ga0075436_100115857	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300006954\|Ga0079219_10340060	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300007076\|Ga0075435_101007079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300009147\|Ga0114129_11967313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300009162\|Ga0075423_11844636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300010303\|Ga0134082_10343861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300010322\|Ga0134084_10261612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300010326\|Ga0134065_10345330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300010326\|Ga0134065_10350514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300010335\|Ga0134063_10183986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300010371\|Ga0134125_10241488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2008	Open in IMG/M
3300010399\|Ga0134127_12537545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300010400\|Ga0134122_11163296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300012005\|Ga0120161_1063207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300012199\|Ga0137383_10605893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300012204\|Ga0137374_10096135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2810	Open in IMG/M
3300012351\|Ga0137386_10746872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300012354\|Ga0137366_10636233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300012513\|Ga0157326_1015260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	900	Open in IMG/M
3300012896\|Ga0157303_10096984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300012911\|Ga0157301_10087265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	890	Open in IMG/M
3300012938\|Ga0162651_100014789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M
3300012951\|Ga0164300_10482981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300012951\|Ga0164300_10943556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300012955\|Ga0164298_10170483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1244	Open in IMG/M
3300012957\|Ga0164303_11120234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300012961\|Ga0164302_10882406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300012985\|Ga0164308_11667041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300012986\|Ga0164304_10696751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300012988\|Ga0164306_10657156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300012989\|Ga0164305_11102559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300013297\|Ga0157378_12463020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300014058\|Ga0120149_1195580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300015265\|Ga0182005_1168790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300015357\|Ga0134072_10330499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300015371\|Ga0132258_11422828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1751	Open in IMG/M
3300015372\|Ga0132256_100393754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1486	Open in IMG/M
3300015373\|Ga0132257_100846620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300015374\|Ga0132255_101120711	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1183	Open in IMG/M
3300015374\|Ga0132255_104679884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300017944\|Ga0187786_10094759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300018000\|Ga0184604_10238614	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300018032\|Ga0187788_10000209	All Organisms → cellular organisms → Bacteria	15913	Open in IMG/M
3300018054\|Ga0184621_10181720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300020002\|Ga0193730_1175809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300022889\|Ga0247785_1016102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300022901\|Ga0247788_1132444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300024182\|Ga0247669_1005824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2490	Open in IMG/M
3300024310\|Ga0247681_1015840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300025903\|Ga0207680_10891927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300025938\|Ga0207704_10897311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300025945\|Ga0207679_10701651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300026312\|Ga0209153_1261710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300026331\|Ga0209267_1312731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300026538\|Ga0209056_10729277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300026552\|Ga0209577_10188267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1594	Open in IMG/M
3300027560\|Ga0207981_1104166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300028592\|Ga0247822_11779024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300028711\|Ga0307293_10014908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2224	Open in IMG/M
3300028715\|Ga0307313_10023971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1679	Open in IMG/M
3300028721\|Ga0307315_10182357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300028782\|Ga0307306_10258279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300028796\|Ga0307287_10265571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300028811\|Ga0307292_10039198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1744	Open in IMG/M
3300028819\|Ga0307296_10095918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1587	Open in IMG/M
3300028828\|Ga0307312_10527185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300028875\|Ga0307289_10278325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300028876\|Ga0307286_10311720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300028878\|Ga0307278_10023806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2820	Open in IMG/M
3300028881\|Ga0307277_10152508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300028884\|Ga0307308_10642475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300030511\|Ga0268241_10157121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300031200\|Ga0307496_10121508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031720\|Ga0307469_11390854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300031940\|Ga0310901_10504461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300032122\|Ga0310895_10685313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300032174\|Ga0307470_11625114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300032180\|Ga0307471_100706153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1173	Open in IMG/M
3300033550\|Ga0247829_11183381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300033550\|Ga0247829_11429445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300034817\|Ga0373948_0161577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300034818\|Ga0373950_0161034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.88%
Host-Associated	Host-Associated	22.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.96%
Plants	Host-Associated → Plants	22.12%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.62%
Sediment	Environmental → Aquatic → Sediment	1.92%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.38%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096952

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_09226120	2070309009	Soil	MNLRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLLVVPL
ICCgaii200_10600761	2228664021	Soil	MNLRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLLVVPLAAGG
C688J13580_10356643	3300001205	Soil	MIHDLYTSLTAREQRAIRWSAAATAAALWLSTAWADPRFLL
JGI25405J52794_100191651	3300003911	Tabebuia Heterophylla Rhizosphere	MNVRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLLGIPLA
Ga0062593_1024656581	3300004114	Soil	MIRDLYTSLTAREQRAVRWSAAATAAALWLSTAWADPRFLLIVPLA
Ga0063455_1002034053	3300004153	Soil	MFRDLYSNLTAREQRALRWSAAATAAVLWLTTAWADPWLLLGVPVVA
Ga0063455_1002665361	3300004153	Soil	MIHDLYSSLTAREQRALRWSGAATAAALWLSTAWADPWVLVSVPVIAGAFW
Ga0062595_1011034821	3300004479	Soil	MFSDLSDLYTNLTAREQRALRWSAAATAAALWLSTAWTDPWLLLA
Ga0062594_1030736021	3300005093	Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWADPRFLLAIPVLAGGLWVYHR
Ga0066673_108248642	3300005175	Soil	MFRDLYTNLSAREQRAFKWSAAATAAALWLSTAWTDPWLLLAVPL
Ga0070666_107741341	3300005335	Switchgrass Rhizosphere	MIRDLYTSLTAREQRAVRWSAAATAAALWLSTAWADPRFLLIVPLTGAGFWFYR
Ga0070669_1007748443	3300005353	Switchgrass Rhizosphere	MISDLYTSLTAREQRAFRWSAAAAAVALWLSMAWMDPMILLTVPL
Ga0070685_108926721	3300005466	Switchgrass Rhizosphere	MIRDLYTSLTAREQRAVRWSAAATAAALWLSTAWADPRFLLIVPL
Ga0070704_1003166763	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MIRDLYTSMTAREQRAIRWSAAATAAALWLSTAWADPRFLL
Ga0066698_101623351	3300005558	Soil	MFRDLYSNMTAREQRALRWSAAATAVALWLSTAWADPWLLLAVPLSG
Ga0068855_1001010041	3300005563	Corn Rhizosphere	MISDLYTSLTAREQRAFRWSAAAAAVALWLSMAWMDPMILLTVPLIGGAF
Ga0068855_1003688611	3300005563	Corn Rhizosphere	MIHDLYTSLTAREQRAIRWSAAATAAALWLSTAWADP
Ga0066708_105584581	3300005576	Soil	MFRDLYTNLNTREQRALRWSAAATAAALWLSTAWADPWLLL
Ga0068856_1009078241	3300005614	Corn Rhizosphere	MFSELSDLYSNLTAREQRALRWSAAATAAVLWLATAWTDPWLLLAVP
Ga0066903_1018212453	3300005764	Tropical Forest Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWADPRFLLGIPLAAGGFWFYRRR
Ga0070717_121383211	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIHDLYTSLTAREQRAVRWSAAATAAALWLSTAWA
Ga0066659_113243471	3300006797	Soil	MFRDLYTNLNAREQRALRWSAAATAAALWLSTAWADPW
Ga0075436_1001158571	3300006914	Populus Rhizosphere	MNFRDLYESLTAREQRALRWSAAATAVALWLSTAW
Ga0079219_103400603	3300006954	Agricultural Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLSTAWA
Ga0075435_1010070791	3300007076	Populus Rhizosphere	MNFRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLLGIPLAAGGFWFYRR
Ga0114129_119673132	3300009147	Populus Rhizosphere	MISDLYTSLTAREQRASRWSAAATAVALWLSMAWADPKFLLTVPLIGGGFYLYRI
Ga0075423_118446361	3300009162	Populus Rhizosphere	MISDLYTSLTAREQRAFRWSAAATAVALWLSMAWADPKFLL
Ga0134082_103438611	3300010303	Grasslands Soil	MFRDSYTNLTAREQRALRWSAAATAAALWLSTAWADPWL
Ga0134084_102616121	3300010322	Grasslands Soil	MFRDLYSNMTAREQRAFRWSAAATAVALWLSTAWADPWLLLAVPLSAGA
Ga0134065_103453303	3300010326	Grasslands Soil	MFRDLYSNMTAREQRALRWSAAATAVALWLSTAWA
Ga0134065_103505141	3300010326	Grasslands Soil	MFSDLYSNLTAREQRALRWSAAATAAALWLSTAWADPWL
Ga0134063_101839863	3300010335	Grasslands Soil	MFRDLYTNLSAREQRAFKWSAAATAAALWLSTAWT
Ga0134125_102414881	3300010371	Terrestrial Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWADPRFLLAIPV
Ga0134127_125375451	3300010399	Terrestrial Soil	MFRDLYTNLSAREQRAFKWSAAATAAALWLSTAWTDPW
Ga0134122_111632963	3300010400	Terrestrial Soil	MISDLYTSLTAREQRAFRWSAAAAAVALWLSMAWMDPMILLTVPLIGG
Ga0120161_10632073	3300012005	Permafrost	MISDFYSSLTSREQRALRWSAAATAVALWLATAWADPWIL
Ga0137383_106058931	3300012199	Vadose Zone Soil	MINDLYSSLTSREQRALRWSAAATAVALWLATAWADPWVLVTVP
Ga0137374_100961351	3300012204	Vadose Zone Soil	MMFRDLYSNLTAREQRAFKWSAGATAAALWLSTAWTDPWL
Ga0137386_107468721	3300012351	Vadose Zone Soil	MMREFFDDLTSREQRALGWSAVAVAAALWLATAWTDPWLLLGV
Ga0137366_106362333	3300012354	Vadose Zone Soil	MMFRDLYSNLTAREQRAFKWSAGATAAALWLSTAWTDPWLLLVVPASAAAFFVYR
Ga0157326_10152601	3300012513	Arabidopsis Rhizosphere	MISDLYTSLTAREQRALRWSAAATAVALWLSMAWADPKFLLTVP
Ga0157303_100969841	3300012896	Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLIVVPLAAGGFW
Ga0157301_100872653	3300012911	Soil	MNFRDLYESLTAREQRALRWSAAAAAVALWLSTAWADPRFLIV
Ga0162651_1000147893	3300012938	Soil	MMRDLYSSLTPREQRAIRWSAAATAAALWLSTAWADPWFLL
Ga0164300_104829813	3300012951	Soil	MIRDLYTSLTAREQRAIRWSAAATAAALWLSTAWADPRFLLIVPLAGAGFWFYR
Ga0164300_109435561	3300012951	Soil	MFSELNDLYANLTAREQRALRWSAAATAAALWLSTAWTDP
Ga0164298_101704833	3300012955	Soil	MIRDLYTSLTAREQRAIRWSAAATAAALWLSTAWA
Ga0164303_111202342	3300012957	Soil	MIHDLYTSLTAREQRAIRWSAAATAAALWLSTAWADPRFLLIVPLAGAGFWFYRR
Ga0164302_108824063	3300012961	Soil	MIRDLYTSLTAREQRAIRWSAAAPAAALWLSTAWADP
Ga0164308_116670411	3300012985	Soil	MIHDLYTSLTAREQRAIRWSAAATAAALWLSTAWAD
Ga0164304_106967513	3300012986	Soil	MIQDLYSSLTAREQRALRWSAAAAAAALWLSTAWA
Ga0164306_106571563	3300012988	Soil	MIHDLYTSLTAREQRAIRWSAAATAAALWLSTAWADPRFLLIVPLAGAAFWFYR
Ga0164305_111025591	3300012989	Soil	MFRDLYTNLTAREQRALRWSAAASAAVLWLATAWTDPWLLLAVPLVAGAFFAYRA
Ga0157378_124630202	3300013297	Miscanthus Rhizosphere	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWADPRFLLAIPVLAGGLWVYHRR
Ga0120149_11955802	3300014058	Permafrost	MINDLYSSLTPREQRAFRWSAAATAVALWLATAWAD
Ga0182005_11687901	3300015265	Rhizosphere	MIRDLYTSLTAREQRAVRWSAAATAAALWLSAAWADPRFLLIVPLAGAGFWF
Ga0134072_103304993	3300015357	Grasslands Soil	MFRDLYSNLTAREQRALRWSAAATAAALWLATAWADPWL
Ga0132258_114228281	3300015371	Arabidopsis Rhizosphere	MNFRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLIVVPLAA
Ga0132256_1003937541	3300015372	Arabidopsis Rhizosphere	MMNFRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLLVIPLAAGGFWFYRR
Ga0132257_1008466201	3300015373	Arabidopsis Rhizosphere	MNFRDLYESLTAREQRALRWRAAATAVALWLSTAWADPRFLLGIPL
Ga0132255_1011207111	3300015374	Arabidopsis Rhizosphere	MIRDLYTSLTAREQRAVRWSAAATAAALWLSTAWADPRFLL
Ga0132255_1046798841	3300015374	Arabidopsis Rhizosphere	MIRDLYTSLTAREQRAVRWSAAATAAALWLSTAWADPRFL
Ga0187786_100947591	3300017944	Tropical Peatland	MLRDLYSNLTAREQRALRWSAAATAVALWLSVAWADLWLL
Ga0184604_102386141	3300018000	Groundwater Sediment	RRPSVMMRDLYSSLTAREQRAIRWSAAATAAALWLSTA
Ga0187788_100002091	3300018032	Tropical Peatland	MFSDLYSNLTAREQRALRWSAAATAAALWLSTAWADPWLLLAVPLA
Ga0184621_101817203	3300018054	Groundwater Sediment	MIQDLYSSLTAREQRALRWSAAATAVALWLSTAWADPW
Ga0193730_11758092	3300020002	Soil	MIHDLYSSLTAREQRAVRWSAAATAAALWLSTAWADPWFLVTVPMIAGGF
Ga0247785_10161021	3300022889	Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLLGIPLA
Ga0247788_11324441	3300022901	Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLLGI
Ga0247669_10058241	3300024182	Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWADPRFLLAIPVLA
Ga0247681_10158403	3300024310	Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWADPRFLLAIP
Ga0207680_108919271	3300025903	Switchgrass Rhizosphere	MIRDLYTSLTAREQRAVRWSAAATAAALWLSTAWA
Ga0207704_108973113	3300025938	Miscanthus Rhizosphere	MIHDLYTSLTAREQRAIRWSAAATAAALWLSTAWADPRFLLIVPLAGA
Ga0207679_107016513	3300025945	Corn Rhizosphere	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWADPRFLLA
Ga0209153_12617102	3300026312	Soil	MFRDLYTNLNAREQRALRWSAAATAAALWLSTAWADPWLLLAVPLAGA
Ga0209267_13127312	3300026331	Soil	MFRDLYTNLSAREQRAFKWSAAATAAALWLSTAWTDPWLLLAVPLAAVGFFV
Ga0209056_107292772	3300026538	Soil	MFRDLYTNLNAREQRALRWSAAATAAALWLSTAWADPWLLLAVPLAGAGFFVY
Ga0209577_101882671	3300026552	Soil	MFRDLYTNLSAREQRAFKWSAAATAAALWLSTAWTAP
Ga0207981_11041661	3300027560	Soil	MLRDLYSNLTAREQRALRWSAAATAVALWLSVAWADLWLLLAVPL
Ga0247822_117790242	3300028592	Soil	MIHDLYTSLTAGEQRAIRWSAAATAAALWLSTAWADPR
Ga0307293_100149081	3300028711	Soil	MINDLYSSLTAREQRALRWSAAATAVALWLSTAWADPW
Ga0307313_100239713	3300028715	Soil	MIQDLYSSLTAREQRALRWSAAATAVALWLSTAWADPWILI
Ga0307315_101823573	3300028721	Soil	MISDLYTSLTAREQRAFRWSAAAAAVALWLAMAWADPMILLTVPLIGG
Ga0307306_102582791	3300028782	Soil	MIHDLYSSLTAREQRAVRWSAAATAAALWLSTAWADP
Ga0307287_102655713	3300028796	Soil	MIQDLYSSLTAREQRALRWSAAATAVALWLSTAWADPWILITVP
Ga0307292_100391983	3300028811	Soil	MFRDLYSNLTAREQRALRWSAAATAAALWLATAWADPWLLLA
Ga0307296_100959181	3300028819	Soil	MIHDLYTSLTAREQRAIRWSAAATAAALRLSTAWA
Ga0307312_105271853	3300028828	Soil	MFRDLYSNLTAREQRALRWSAAATAAPLWLAPAWTHTRLLH
Ga0307289_102783251	3300028875	Soil	MISDLYTSLTAREQRAFRWSAAAAAVALWLAMAWADPMILLT
Ga0307286_103117202	3300028876	Soil	MISDLYTSLTAREQRAFRWSAAAAAVALWLAMAWADPM
Ga0307278_100238064	3300028878	Soil	MFRDLYSNLTVREQRALRWSAAATAAALWLATAWTDPRL
Ga0307277_101525081	3300028881	Soil	MIGDMYSSLTAREQRALRWSAGATAAALWLTTAWADPWILLTVP
Ga0307308_106424752	3300028884	Soil	MINDLYSSLTAREQRALRWSAAATAVALWLSTAWADPWILITVPLIGAA
Ga0268241_101571212	3300030511	Soil	MNFRDLYESLTAREQRALRWSAAATAAALWLSTAWTDPRFLVVVPLAVGGFWLYRR
Ga0307496_101215081	3300031200	Soil	MINDLYSSLTAREQRALRWSAAATAVALWLSTAWADP
Ga0307469_113908541	3300031720	Hardwood Forest Soil	MISDLYTSLTAREQRAFRWSAAAAAVALWLSMAWADPKFLL
Ga0310901_105044612	3300031940	Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWADPRFLLAI
Ga0310895_106853131	3300032122	Soil	MNFRDLYDSLTAREQRALRWSAAATAVALWLATAWADPRFLLAIPVLAGGLW
Ga0307470_116251142	3300032174	Hardwood Forest Soil	MIHDLYTSLTAREQRAIRWSAAATAAALWLSTAWADPRFLLIVPLAGAAFW
Ga0307471_1007061533	3300032180	Hardwood Forest Soil	MFSDLYTNLTAREQRALRWSAAATAAALWLATAWADPWLLLAVPLAAA
Ga0247829_111833813	3300033550	Soil	MIRDLYTSMTAREQRAIRWSAAATAAALWLSTAWA
Ga0247829_114294451	3300033550	Soil	MISDLYTSLTAREQRAFRWSAAAAAVALWLSMAWMDPMILLTVPLIGGAFY
Ga0373948_0161577_1_108	3300034817	Rhizosphere Soil	MNFRDLYESLTAREQRALRWSAAATAVALWLATAWA
Ga0373950_0161034_2_133	3300034818	Rhizosphere Soil	MNVRDLYESLTAREQRALRWSAAATAVALWLSTAWADPRFLLGI

Hidden Markov Model


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