NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F096915

Metagenome Family F096915

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096915
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 62 residues
Representative Sequence MNYLPQDFARCMTNPLLEQCKQCARNVHINPVHPAAGRQVWIGPWVGHGPCPNGDFVEVEDE
Number of Associated Samples 57
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 94.23 %
% of genes near scaffold ends (potentially truncated) 15.38 %
% of genes from short scaffolds (< 2000 bps) 60.58 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (48.077 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(48.077 % of family members)
Environment Ontology (ENVO) Unclassified
(66.346 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(65.385 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.44%    β-sheet: 6.67%    Coil/Unstructured: 78.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF11753DUF3310 13.46
PF02195ParBc 2.88
PF12705PDDEXK_1 2.88
PF01612DNA_pol_A_exo1 1.92
PF11397GlcNAc 1.92
PF06067DUF932 0.96
PF00959Phage_lysozyme 0.96
PF05866RusA 0.96
PF04851ResIII 0.96
PF03237Terminase_6N 0.96
PF01370Epimerase 0.96
PF06378DUF1071 0.96
PF06048DUF927 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 0.96
COG5519Predicted ATPase domain of Cch-like helicases, DUF927 familyGeneral function prediction only [R] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.92 %
UnclassifiedrootN/A48.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002161|JGI24766J26685_10012683All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2224Open in IMG/M
3300005525|Ga0068877_10045432All Organisms → Viruses → Predicted Viral2920Open in IMG/M
3300005525|Ga0068877_10163777All Organisms → Viruses → Predicted Viral1352Open in IMG/M
3300005527|Ga0068876_10030762All Organisms → Viruses → Predicted Viral3342Open in IMG/M
3300005805|Ga0079957_1006189Not Available9614Open in IMG/M
3300005805|Ga0079957_1079596All Organisms → Viruses → Predicted Viral1858Open in IMG/M
3300006802|Ga0070749_10115803All Organisms → Viruses → Predicted Viral1576Open in IMG/M
3300007169|Ga0102976_1011004Not Available30670Open in IMG/M
3300007171|Ga0102977_1125398Not Available1327Open in IMG/M
3300007640|Ga0070751_1265337Not Available648Open in IMG/M
3300008113|Ga0114346_1113846Not Available1215Open in IMG/M
3300008117|Ga0114351_1000179All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage56130Open in IMG/M
3300008264|Ga0114353_1033912All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6513Open in IMG/M
3300009169|Ga0105097_10002529Not Available9003Open in IMG/M
3300009169|Ga0105097_10421550All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage743Open in IMG/M
3300009170|Ga0105096_10259766Not Available883Open in IMG/M
3300009183|Ga0114974_10503551Not Available679Open in IMG/M
3300010354|Ga0129333_10140796All Organisms → Viruses → Predicted Viral2216Open in IMG/M
3300010354|Ga0129333_10200226All Organisms → Viruses → Predicted Viral1816Open in IMG/M
3300010370|Ga0129336_10393022Not Available758Open in IMG/M
3300010370|Ga0129336_10776567Not Available505Open in IMG/M
3300017747|Ga0181352_1004227All Organisms → Viruses → Predicted Viral4981Open in IMG/M
3300019784|Ga0181359_1182032Not Available693Open in IMG/M
3300020498|Ga0208050_1000770Not Available4785Open in IMG/M
3300020498|Ga0208050_1002554All Organisms → Viruses → Predicted Viral2425Open in IMG/M
3300020551|Ga0208360_1005651All Organisms → Viruses → Predicted Viral1930Open in IMG/M
3300020570|Ga0208465_1022874Not Available819Open in IMG/M
3300022179|Ga0181353_1040241All Organisms → Viruses → Predicted Viral1236Open in IMG/M
3300022179|Ga0181353_1080440All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium823Open in IMG/M
3300022179|Ga0181353_1097923Not Available724Open in IMG/M
3300025889|Ga0208644_1178494Not Available944Open in IMG/M
3300027721|Ga0209492_1001577Not Available7072Open in IMG/M
3300027793|Ga0209972_10000031Not Available138223Open in IMG/M
3300027793|Ga0209972_10008141Not Available7299Open in IMG/M
3300027816|Ga0209990_10063490All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1851Open in IMG/M
3300027900|Ga0209253_10436975Not Available987Open in IMG/M
3300027900|Ga0209253_10597997Not Available810Open in IMG/M
3300027972|Ga0209079_10150059All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage798Open in IMG/M
3300031787|Ga0315900_10143917All Organisms → Viruses → Predicted Viral2219Open in IMG/M
3300031787|Ga0315900_11051905Not Available529Open in IMG/M
3300031857|Ga0315909_10000395All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage58539Open in IMG/M
3300031857|Ga0315909_10217052All Organisms → Viruses → Predicted Viral1500Open in IMG/M
3300031951|Ga0315904_10052504All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4536Open in IMG/M
3300031951|Ga0315904_10314117Not Available1462Open in IMG/M
3300032116|Ga0315903_10020278All Organisms → cellular organisms → Bacteria7382Open in IMG/M
3300033414|Ga0316619_10831658Not Available792Open in IMG/M
3300033416|Ga0316622_101225109Not Available878Open in IMG/M
3300033416|Ga0316622_101840070Not Available705Open in IMG/M
3300033418|Ga0316625_100004223Not Available4160Open in IMG/M
3300033418|Ga0316625_100294187All Organisms → Viruses → Predicted Viral1151Open in IMG/M
3300033482|Ga0316627_100928623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Pseudochelatococcus → Pseudochelatococcus contaminans837Open in IMG/M
3300033485|Ga0316626_12208277Not Available500Open in IMG/M
3300033521|Ga0316616_103399965All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage599Open in IMG/M
3300033521|Ga0316616_103796160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33569Open in IMG/M
3300033816|Ga0334980_0083600All Organisms → Viruses → Predicted Viral1333Open in IMG/M
3300033816|Ga0334980_0338335Not Available578Open in IMG/M
3300033979|Ga0334978_0018015All Organisms → Viruses → Predicted Viral3737Open in IMG/M
3300033979|Ga0334978_0044110All Organisms → Viruses → Predicted Viral2323Open in IMG/M
3300033979|Ga0334978_0046575All Organisms → Viruses → Predicted Viral2253Open in IMG/M
3300033979|Ga0334978_0145774All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1182Open in IMG/M
3300033980|Ga0334981_0168357All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300033980|Ga0334981_0241414Not Available822Open in IMG/M
3300033980|Ga0334981_0331201Not Available667Open in IMG/M
3300033981|Ga0334982_0097471All Organisms → Viruses → Predicted Viral1554Open in IMG/M
3300033981|Ga0334982_0134373All Organisms → Viruses → Predicted Viral1273Open in IMG/M
3300033981|Ga0334982_0343660Not Available691Open in IMG/M
3300033981|Ga0334982_0501852Not Available536Open in IMG/M
3300034012|Ga0334986_0014721Not Available5476Open in IMG/M
3300034012|Ga0334986_0038048All Organisms → Viruses → Predicted Viral3131Open in IMG/M
3300034012|Ga0334986_0111043All Organisms → Viruses → Predicted Viral1628Open in IMG/M
3300034012|Ga0334986_0239459Not Available992Open in IMG/M
3300034020|Ga0335002_0200692All Organisms → Viruses → Predicted Viral1240Open in IMG/M
3300034020|Ga0335002_0227479All Organisms → Viruses → Predicted Viral1138Open in IMG/M
3300034020|Ga0335002_0280101Not Available984Open in IMG/M
3300034020|Ga0335002_0383365Not Available787Open in IMG/M
3300034021|Ga0335004_0424724Not Available746Open in IMG/M
3300034061|Ga0334987_0060408All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3083Open in IMG/M
3300034061|Ga0334987_0702283Not Available579Open in IMG/M
3300034061|Ga0334987_0739032Not Available557Open in IMG/M
3300034061|Ga0334987_0748823Not Available552Open in IMG/M
3300034062|Ga0334995_0081777All Organisms → Viruses → Predicted Viral2508Open in IMG/M
3300034062|Ga0334995_0265997All Organisms → Viruses → Predicted Viral1144Open in IMG/M
3300034062|Ga0334995_0531831Not Available699Open in IMG/M
3300034063|Ga0335000_0037944All Organisms → Viruses → Predicted Viral3515Open in IMG/M
3300034063|Ga0335000_0048972Not Available3035Open in IMG/M
3300034063|Ga0335000_0254146All Organisms → Viruses → Predicted Viral1102Open in IMG/M
3300034101|Ga0335027_0003436Not Available13955Open in IMG/M
3300034101|Ga0335027_0010318Not Available8081Open in IMG/M
3300034103|Ga0335030_0000334All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage45345Open in IMG/M
3300034103|Ga0335030_0003462All Organisms → cellular organisms → Bacteria12309Open in IMG/M
3300034103|Ga0335030_0008848Not Available7761Open in IMG/M
3300034103|Ga0335030_0098530All Organisms → Viruses → Predicted Viral2132Open in IMG/M
3300034103|Ga0335030_0680218All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage620Open in IMG/M
3300034104|Ga0335031_0003467Not Available11776Open in IMG/M
3300034104|Ga0335031_0297859All Organisms → Viruses → Predicted Viral1050Open in IMG/M
3300034106|Ga0335036_0003882Not Available12796Open in IMG/M
3300034106|Ga0335036_0008714Not Available8386Open in IMG/M
3300034109|Ga0335051_0046796All Organisms → Viruses → Predicted Viral2318Open in IMG/M
3300034109|Ga0335051_0129156All Organisms → Viruses → Predicted Viral1299Open in IMG/M
3300034112|Ga0335066_0119239Not Available1644Open in IMG/M
3300034118|Ga0335053_0061809All Organisms → Viruses → Predicted Viral2650Open in IMG/M
3300034122|Ga0335060_0023615All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4041Open in IMG/M
3300034122|Ga0335060_0302979Not Available873Open in IMG/M
3300034280|Ga0334997_0318485All Organisms → Viruses → Predicted Viral1000Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater48.08%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake10.58%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil8.65%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.73%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment4.81%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.85%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.85%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.88%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.88%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.92%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake1.92%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.96%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.96%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.96%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002161Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USAEnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300007169Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007171Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008264Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTREnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020498Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020551Freshwater microbial communities from Lake Mendota, WI - 27JUL2010 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300020570Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300033979Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003EnvironmentalOpen in IMG/M
3300033980Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034020Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055EnvironmentalOpen in IMG/M
3300034021Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034063Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034109Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034122Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181EnvironmentalOpen in IMG/M
3300034280Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24766J26685_1001268343300002161Freshwater And SedimentVRHLPQDFARCMTNPLLDQCKQCARNVHMNPVHPEAMRQVWIGPWVGHGPCPNGDFVEVXDE*
Ga0068877_10045432133300005525Freshwater LakeMKYLAQDFARCMSNPLLDQCKQCRRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE*
Ga0068877_1016377763300005525Freshwater LakeMRYLAQDFARCMTNPLLDQCKQCRRNVNINPVSPDAQRQSWIGPWVGHGP
Ga0068876_1003076253300005527Freshwater LakeMRYLAQDFARCMTNPLLDQCKQCRRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE*
Ga0079957_1006189143300005805LakeVNYLPQNFARCLSNPLLEQCKTCQRNVNNSPVHPKAEWQSMIGPWTGHGPCPNGDFVEVKDD*
Ga0079957_107959643300005805LakeMNYLPQDFARCMTNPKLDQCKQCARNVHKSPVHPKAERQMWIGPWVGHGPCPNGDFVEKEEE*
Ga0070749_1011580343300006802AqueousMKYLAQDFARCMTNPLLDQCKQCQRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVKDDETVR*
Ga0102976_101100473300007169Freshwater LakeMNYLPQDFARCTSNPLLEQCKTCQRNVHINPVSPDAQRQMWIGPWVGHGPCPNGDFVEVKDE*
Ga0102977_112539853300007171Freshwater LakeMNYLPQDFARCAGNPLLEQCKTCQRNVHINPVSPDAQRQMWIGPWVGHGPCPNGDFVEVKDE*
Ga0070751_126533713300007640AqueousMRYLAQDFARCMTNPLLDQCKQCRRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEAKDE*
Ga0114346_111384623300008113Freshwater, PlanktonMRYLAQDFARCMTNPLLDQCKQCRRNVNMNPVSPDAQRQSWIGPWVGHGPCPNGDFVEVKDE*
Ga0114351_1000179193300008117Freshwater, PlanktonMISSNIYKYKPQDFARCESNPLLDQCKRCGRNVHINPAHPGWQTWIGPWTGHGPCPNGDFMEIKNADS*
Ga0114353_1033912203300008264Freshwater, PlanktonMKYLAQDFARCMSNPFLDQCKQCRRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE*
Ga0105097_10002529123300009169Freshwater SedimentMKYKPQDFALCMSNPLLDQCKQCARNVHMNPVHPEAMRQVWIGPWVGHGPCPNGDFVEVEDE*
Ga0105097_1042155023300009169Freshwater SedimentMSFKGDGVNYLPQDFARCLSNPLLEQCKTCQRNVNNSPVHPKAEWQSMIGPWTGHGPCPNGDFVEKEGQ*
Ga0105096_1025976633300009170Freshwater SedimentMNYKPQEFARCPSNPLLDQCKTCQRNVRINPVHPDNAWQTWIGPWVGHGPCPNGDFVEVKDD*
Ga0114974_1050355123300009183Freshwater LakeMNYKPQDFARCESNPLLDQCKQCARNVHMNPVHPDSAWQTWIGPWVGHGPCPNGDFVEVEDE*
Ga0129333_1014079683300010354Freshwater To Marine Saline GradientMNYKPEDFARCVSNPLLEQCKTCQRNVNNSPFDPDAQRQSWIGPWVGHGPCPNGDFVEVEDE*
Ga0129333_1020022633300010354Freshwater To Marine Saline GradientMNYKSQDFARCVSNPLLEQCKQCARNVNNSPVHPKAARQSWIGPWVGHGPCPNGDFVEVKDE*
Ga0129336_1039302223300010370Freshwater To Marine Saline GradientMNYKPEDFARCPGNPLLDQCKTCQRNVNNSPFNPDGSWHTWIGPWVGHGPCPNGDFVEVEDE*
Ga0129336_1077656713300010370Freshwater To Marine Saline GradientMNYLPQDFARCMTNPLLEQCKTCQRNVHINPVSPDAQRQSWIGPWTGHGPCPNGDFVEVKDE*
Ga0181352_100422743300017747Freshwater LakeMNYLPQDFARCMTNPLLEQCKQCQRNVNNSPVHPAAGRQVWIGPWVGHGPCPNGDFVEKEGE
Ga0181359_118203223300019784Freshwater LakeMNYLPQDFARCVSNPLLEQCKQCQRNVNNSPVSPDAQRQSWIGPWVGHGPCPNGDFVEKENE
Ga0208050_100077083300020498FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEVKDE
Ga0208050_100255443300020498FreshwaterMISSNIYKYKPQDFARCASNPLLDQCKRCGRNVHMNPVHSGWQMWIGPWTGHGPCPNGDFMEIKNENQQTNL
Ga0208360_100565153300020551FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQVWIGPWVGHGPCPNGDFVEKEGE
Ga0208465_102287423300020570FreshwaterMNYLPQDFARCPSNPLLEQCKQCARNMHINPVHPAAGRQVWIGPWTGHGPCPNGDFVEKEGE
Ga0181353_104024113300022179Freshwater LakeCHSTQEKSMNYKPQDFARCMTNPLLDQCKQCRRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0181353_108044033300022179Freshwater LakeMNYLPQDFARCMTNPLLEQCKQCARNMHINPVHPAAGRQVWIGPWTGHGPCPNGDFVEKEGE
Ga0181353_109792333300022179Freshwater LakeMNYKPQDFARCESNPLLDQCKQCARNVHMNPVHPAAGRQVWIGPWTGHGPCPNGDFVEVKDE
Ga0208644_117849423300025889AqueousMKYLAQDFARCMTNPLLDQCKQCQRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVKDDETVR
Ga0209492_100157793300027721Freshwater SedimentMKYKPQDFALCMSNPLLDQCKQCARNVHMNPVHPEAMRQVWIGPWVGHGPCPNGDFVEVEDE
Ga0209972_10000031703300027793Freshwater LakeMKYLAQDFARCMSNPLLDQCKQCRRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0209972_10008141163300027793Freshwater LakeMRYLAQDFARCMTNPLLDQCKQCRRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0209990_1006349073300027816Freshwater LakeMRYLAQDFARCMTNPLLDQCKQCQRNVNINPVSPYAQRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0209253_1043697523300027900Freshwater Lake SedimentMRCSNQEQNMNYLPQDFARCMSNPLLEQCKQCQRNVNNSPVHPAAGRQMWIGPWTGHGPCPDGLFVEVKDE
Ga0209253_1059799723300027900Freshwater Lake SedimentMNYKPQDFARCPSNPLLDQCKTCQRNVNNSPFNPDGSWHTWIGPWVGHGPCPNGDFVEKENE
Ga0209079_1015005923300027972Freshwater SedimentMISSNIYKYKPQDFARCESNPLLDQCKQCARNVRINPAHPGWQTWIGPWTGHGPCPNGDFMEIKNADS
Ga0315900_1014391733300031787FreshwaterMRYLAQDFARCMTNPLLDQCKQCQRNVHMNPVHPDSAWQTWIGPWVGHGPCPNGDFVEVEDE
Ga0315900_1105190523300031787FreshwaterMRYLAQDFARCMTNPLLDQCKQCRRNVNMNPVSPDAQRQSWIGPWVGHGPCPNGDFVEVKDE
Ga0315909_10000395533300031857FreshwaterMISSNIYKYKPQDFARCESNPLLDQCKRCGRNVHINPAHPGWQTWIGPWTGHGPCPNGDFMEIKNADS
Ga0315909_1021705233300031857FreshwaterMRYLAQDFARCVSNPLLEQCKQCQRNVNNSPVDPRAGRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0315904_10052504103300031951FreshwaterMNYLPQDFARCMSNPLLEQCKTCQRNVNNSPVHPAAGRQMWIGPWTGHGPCPNGDFVEKEGE
Ga0315904_1031411723300031951FreshwaterMTHYLPQDFSRCPSNPILDQCKQCSRNVNNSPVSPNAMWQSWIGPWVGHGPCPNGDFVEKKD
Ga0315903_10020278133300032116FreshwaterVNHLPQDFARCMTNPLLEQCKTCQRNVNNSPVHPKAERQMWIGPWTGHGPCPNGDFVEKEGE
Ga0316619_1083165823300033414SoilMRYAAQDFSRCPSNPLLDQCKKCQRNVNNSPVNPNSVWQVWIGPWVGHGPCPNGDFVEVEDE
Ga0316622_10122510933300033416SoilMRYLAQDFARCMTNPLLDQCKLCRRNVNINPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0316622_10184007013300033416SoilMRYAAQDFSRCPSNPLLDQCKKCQRNVNNSPVNPNSVWQVWIGPWVGHGPCPDGHFVEVKDDR
Ga0316625_10000422353300033418SoilMTHYLPQDFSRCMSNPLLDQCKRCQRNINNSPVSPDAQRQSWIGPWVGHGPCPNGDFVEKKAD
Ga0316625_10029418753300033418SoilMRYLAQDFARCMTNPLLDQCKQCRRNVNMNPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0316627_10092862323300033482SoilMRYLAQDFARCMTNPLLDQCKQCRRNVNTNPVSPDAQRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0316626_1220827723300033485SoilMRYLAQDFARCMTNPLLDQCKKCQRNVNNSPVSPDAQRQSWIGPWVGHGPCPNGDFVEKKAD
Ga0316616_10339996533300033521SoilGREEMNYLPQDFARCTSNPLLEQCKTCQRNVNNNPVSPDAQRQVWIGPWVGHGPCPNGDFVEVKDE
Ga0316616_10379616033300033521SoilMRYLAQDFARCMTNPLLDQCKQCARNVHMNPVHPDSMWQTWIGPWVGHGPCPNG
Ga0334980_0083600_2_1843300033816FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQMWIGPWVGHGPCPNGDFVEKE
Ga0334980_0338335_207_3953300033816FreshwaterMNYLPQDFARCMSNPLLDQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEKEGE
Ga0334978_0018015_2898_31163300033979FreshwaterMISSNIYKYKPQDFARCASNPLLDQCKRCGRNVHMNPVHSGWQTWIGPWTGHGPCPNGDFMEIKSENQQTNL
Ga0334978_0044110_1848_20603300033979FreshwaterMISSNIYKYKPQDFARCESNPSLDQCKKCGRNVHMNPVHPDSVWQTWIGPWTGHGPCPNGDFMEIKNADS
Ga0334978_0046575_1931_21193300033979FreshwaterMNYLPQYFARCVSNPLLEQCKTCQRNINTNPPRVWVEHQTWIGPWTGHGPCPNGDFVEVKDE
Ga0334978_0145774_151_3363300033979FreshwaterMNYLPQDFARCPSNPLLDQCKQCARNMHINPVHPAAGRQVWIGPWTGHGPCPNGDFVEKQ
Ga0334981_0168357_238_4263300033980FreshwaterMNYLPQDFARCMTNPLLEQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEKEGE
Ga0334981_0241414_602_7903300033980FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQVWIGPWTGHGPCPNGDFVEKEGE
Ga0334981_0331201_503_6673300033980FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQVWIGPWVGHGPCPNGD
Ga0334982_0097471_666_8903300033981FreshwaterMISSNIYKYKPQDFARCASNPLLDQCKRCGRNVHMNPVHPAAGRQVWIGPWTGHGPCPNGDFMEIKSENQQTNL
Ga0334982_0134373_651_8393300033981FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEVKDD
Ga0334982_0343660_465_6533300033981FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEKEGE
Ga0334982_0501852_1_1893300033981FreshwaterMNYLPQDFARCESNPLLEQCKQCARNVHINPVHPAAGRQVWIGPWTGHGPCPDGDFVEVKDE
Ga0334986_0014721_4568_47563300034012FreshwaterMNYLPQDFARCMSNPLLEQCKQCARNVHINPVHPAAGRQVWIGPWVGHGPCPNGDFVEKENE
Ga0334986_0038048_2763_29513300034012FreshwaterMNYLPQDFARCMSNPLLEQCKTCQRNVNNSPVHPKAERQVWIGPWTGHGPCPNGDFVEVKDE
Ga0334986_0111043_1161_13493300034012FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQVWIGPWVGHGPCPNGDFVEKENE
Ga0334986_0239459_817_9903300034012FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQVWIGPWTGHGPCPNGDFVE
Ga0335002_0200692_421_6093300034020FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEKEGE
Ga0335002_0227479_45_2333300034020FreshwaterMNYLPQDFARCMSNPLLEQCKTCQRNVNTNPPRVWVEHQMWIGPWIGHGPCPNGDFVEVKDE
Ga0335002_0280101_55_2433300034020FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQVWIGPWVGHGPCPNGDFVEVKDD
Ga0335002_0383365_574_7623300034020FreshwaterMNHLPQYFARCMSNPLLDQCKQCARNVHINPVHPAAGRQVWIGPWTGHGPCPNGDFVEVKDE
Ga0335004_0424724_1_1833300034021FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEAK
Ga0334987_0060408_2645_28333300034061FreshwaterMNYLPQDFARCESNPLLEQCKQCQRNVNNSPVHPAAGRQLWIGPWTGHGPCPNGDFVEKENE
Ga0334987_0702283_240_4283300034061FreshwaterMNYKPEDFSRCVSNPLLEQCKTCQRNLNNSPFDPDAQRQSWIGPWVGHGPCPNGDFVEVEDE
Ga0334987_0739032_314_5023300034061FreshwaterMNYLPQDFARCESNPLLEQCKTCQRNVNNSPVHPKAEWQSMIGPWAGHGPCPNGDFVEVKDE
Ga0334987_0748823_2_1603300034061FreshwaterCPGNPLLDQCKTCQRNLNNSPFNPDAQRQSWIGPWVGHGPCPNGDFVEVKDE
Ga0334995_0081777_135_3233300034062FreshwaterMTYLPQDFARCPSNPLLDQCKTCQRNVNNSPVHPAAGRQMWIGPWVGHGPCPNGDFVEKGEE
Ga0334995_0265997_188_3763300034062FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQMWIGPWVGHGPCPNGDFVEKEGE
Ga0334995_0531831_238_4263300034062FreshwaterMNYLPEDFSRCPGNPLLEQCKTCQRNVNNSPVHPKAERQMWIGPWVGHGPCPNGDFVEVKDE
Ga0335000_0037944_2038_22263300034063FreshwaterMNYLPQDFARCMSNPLLDQCKTCQRNVNSNPVHPKAERQSWIGPWVGHGPCPNGDFVEVEDE
Ga0335000_0048972_1646_18343300034063FreshwaterMKYKPQDFALCMSNPLLDQCKQCARNVHMNPVHPEAMRQVWIGPWVGHGPCPNGDFVEVKDE
Ga0335000_0254146_676_8643300034063FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQMWIGPWVGHGPCPNGDFVEVKDD
Ga0335027_0003436_63_2513300034101FreshwaterMNYLPQYFARCVSNPLLEQCKTCQRNINTNPPRAWAEHQTWIGPWTGHGPCPNGDFVEKEGE
Ga0335027_0010318_244_4323300034101FreshwaterMNYLPQDFARCMTNPLLEQCKQCARNMHINPVHPAAGRQIWIGPWTGHGPCPNGDFVEKEGE
Ga0335030_0000334_28791_290093300034103FreshwaterMISSNIYKYKPQDFARCESNPLLDQCKRCGRNVHMNPVHSGWQTWIGPWTGHGPCPNGDFMEIKNENQQTNL
Ga0335030_0003462_11131_113193300034103FreshwaterMNYLPQDFARCESNPLLEQCKQCARNVHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEKENE
Ga0335030_0008848_735_9233300034103FreshwaterMNYLPQDFARCMTNPLLEQCKQCARNMHINPVHPAAGRQMWIGPWVGHGPCPNGDFVEVKDD
Ga0335030_0098530_1327_15153300034103FreshwaterMNYLPQDFARCPSNPLLEQCKQCARNMHINPVHPAAGRQVWIGPWVGHGPCPNGDFVEKEGE
Ga0335030_0680218_3_1973300034103FreshwaterVGMNYLPQDFARCESNPLLEQCKQCQRNVNNSPVHPAAGRQLWIGPWTGHGPCPNGDFVEKENE
Ga0335031_0003467_7129_73173300034104FreshwaterMKYLPQDFARCMSNPLLDQCKQCARNVHMNPVHPDSAWQTWIGPWVGHGPCPNGDFVEVKDE
Ga0335031_0297859_772_9603300034104FreshwaterMNYKPQDFARCMTNPLLDQCKQCARNVHMNPVHPDSAWQTWIGPWVGHGPCPNGDFVEVGDE
Ga0335036_0003882_2407_25953300034106FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQIWIGPWAGHGPCPNGDFVEKEGE
Ga0335036_0008714_5056_52443300034106FreshwaterMNYLPQDFARCESNPLLDQCKQCARNMHINPVHPAAGRQMWIGPWVGHGPCPDGLFVEVKDD
Ga0335051_0046796_2148_23183300034109FreshwaterMNYLPQDFARCPSNPLLEQCKQCARNMHINPVHPAAGRQVWIGPWTGHGPCPNGDFV
Ga0335051_0129156_218_4063300034109FreshwaterMNYLPQDFARCMTNPLLEQCKQCARNVHINPVHPAAGRQVWIGPWVGHGPCPNGDFVEVEDE
Ga0335066_0119239_1495_16443300034112FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQMWIGPWTGHGP
Ga0335053_0061809_485_6733300034118FreshwaterMNYLPQDFARCESNPLLEQCKQCARNVHINPVHPAAGRQVWIGPWVGHGPCPNGDFVEKENE
Ga0335060_0023615_3684_38723300034122FreshwaterMNYLPQDFARCMSNPLLEQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNGDFVEKEGE
Ga0335060_0302979_2_1873300034122FreshwaterMISSNIYKYKPQDFARCESNPLLDQCKRCGRNVHMNPVHSGWQTWIGPWTGHGPCPNGDFME
Ga0334997_0318485_838_9993300034280FreshwaterMNYLPQDFARCESNPLLEQCKQCARNMHINPVHPAAGRQMWIGPWTGHGPCPNG


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