Metagenome Family F096910

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096910
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	101 residues
Representative Sequence	EHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Number of Associated Samples	84
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.96 %
% of genes near scaffold ends (potentially truncated)	86.54 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (71.154 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (18.269 % of family members)
Environment Ontology (ENVO)	Unclassified (42.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (32.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.67% β-sheet: 8.91% Coil/Unstructured: 58.42%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF05136	Phage_portal_2	26.92
PF00574	CLP_protease	2.88
PF13884	Peptidase_S74	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG5511	Phage capsid protein	Mobilome: prophages, transposons [X]	26.92
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	5.77
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	5.77
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	2.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
All Organisms	root	All Organisms	28.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
cellular organisms	root	All Organisms → cellular organisms	23.08 %
Viruses	superkingdom	All Organisms → Viruses	5.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.81 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000843\|FwTDRAFT_106119	Not Available	999	Open in IMG/M
3300004126\|Ga0066179_10174196	Not Available	592	Open in IMG/M
3300004481\|Ga0069718_15192765	Not Available	631	Open in IMG/M
3300005527\|Ga0068876_10687414	Not Available	548	Open in IMG/M
3300006802\|Ga0070749_10250510	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1003	Open in IMG/M
3300006802\|Ga0070749_10345148	Not Available	828	Open in IMG/M
3300006803\|Ga0075467_10156342	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1304	Open in IMG/M
3300006805\|Ga0075464_10042928	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2469	Open in IMG/M
3300006805\|Ga0075464_10617552	Not Available	668	Open in IMG/M
3300006917\|Ga0075472_10517601	Not Available	594	Open in IMG/M
3300007177\|Ga0102978_1109023	Not Available	6686	Open in IMG/M
3300007363\|Ga0075458_10181590	Not Available	648	Open in IMG/M
3300007544\|Ga0102861_1050185	All Organisms → Viruses → Predicted Viral	1083	Open in IMG/M
3300007545\|Ga0102873_1168642	Not Available	659	Open in IMG/M
3300007548\|Ga0102877_1081039	Not Available	929	Open in IMG/M
3300007559\|Ga0102828_1148257	Not Available	587	Open in IMG/M
3300007593\|Ga0102918_1228069	Not Available	569	Open in IMG/M
3300007642\|Ga0102876_1040509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1310	Open in IMG/M
3300007708\|Ga0102859_1094820	Not Available	856	Open in IMG/M
3300007972\|Ga0105745_1096345	Not Available	866	Open in IMG/M
3300007973\|Ga0105746_1012236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2451	Open in IMG/M
3300007973\|Ga0105746_1113117	Not Available	898	Open in IMG/M
3300007973\|Ga0105746_1232185	Not Available	633	Open in IMG/M
3300007973\|Ga0105746_1300467	Not Available	557	Open in IMG/M
3300007973\|Ga0105746_1305026	Not Available	552	Open in IMG/M
3300007974\|Ga0105747_1060968	All Organisms → Viruses → Predicted Viral	1128	Open in IMG/M
3300007992\|Ga0105748_10353772	Not Available	629	Open in IMG/M
3300008108\|Ga0114341_10339285	Not Available	761	Open in IMG/M
3300008999\|Ga0102816_1078250	All Organisms → Viruses → Predicted Viral	1000	Open in IMG/M
3300009026\|Ga0102829_1221825	Not Available	617	Open in IMG/M
3300009051\|Ga0102864_1147137	Not Available	644	Open in IMG/M
3300009056\|Ga0102860_1032877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1367	Open in IMG/M
3300009056\|Ga0102860_1119803	Not Available	736	Open in IMG/M
3300009081\|Ga0105098_10065626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1507	Open in IMG/M
3300009085\|Ga0105103_10296437	Not Available	880	Open in IMG/M
3300009146\|Ga0105091_10694741	Not Available	533	Open in IMG/M
3300009152\|Ga0114980_10130020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1497	Open in IMG/M
3300009155\|Ga0114968_10404263	Not Available	745	Open in IMG/M
3300009158\|Ga0114977_10201521	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1166	Open in IMG/M
3300009161\|Ga0114966_10587724	Not Available	623	Open in IMG/M
3300009165\|Ga0105102_10052882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1791	Open in IMG/M
3300013004\|Ga0164293_10885621	Not Available	562	Open in IMG/M
3300013372\|Ga0177922_10012357	Not Available	699	Open in IMG/M
3300013372\|Ga0177922_10575960	Not Available	525	Open in IMG/M
3300017701\|Ga0181364_1012639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1417	Open in IMG/M
3300017707\|Ga0181363_1061898	Not Available	656	Open in IMG/M
3300017707\|Ga0181363_1069905	Not Available	609	Open in IMG/M
3300017716\|Ga0181350_1092195	Not Available	754	Open in IMG/M
3300017736\|Ga0181365_1100486	Not Available	700	Open in IMG/M
3300017747\|Ga0181352_1045250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1293	Open in IMG/M
3300017754\|Ga0181344_1112596	Not Available	786	Open in IMG/M
3300017766\|Ga0181343_1138192	Not Available	681	Open in IMG/M
3300017766\|Ga0181343_1171085	Not Available	601	Open in IMG/M
3300017780\|Ga0181346_1088102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1216	Open in IMG/M
3300017784\|Ga0181348_1083999	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1259	Open in IMG/M
3300018420\|Ga0181563_10323816	Not Available	895	Open in IMG/M
3300020172\|Ga0211729_10112259	Not Available	857	Open in IMG/M
3300020536\|Ga0207939_1023357	Not Available	849	Open in IMG/M
3300020549\|Ga0207942_1006172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1707	Open in IMG/M
3300020554\|Ga0208599_1020312	Not Available	1072	Open in IMG/M
3300021963\|Ga0222712_10003821	Not Available	16142	Open in IMG/M
3300022190\|Ga0181354_1119935	Not Available	846	Open in IMG/M
3300025585\|Ga0208546_1005500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	3516	Open in IMG/M
3300025896\|Ga0208916_10022544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2496	Open in IMG/M
3300027210\|Ga0208802_1058064	Not Available	522	Open in IMG/M
3300027213\|Ga0208555_1046270	Not Available	677	Open in IMG/M
3300027679\|Ga0209769_1210072	Not Available	601	Open in IMG/M
3300027733\|Ga0209297_1030516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2512	Open in IMG/M
3300027733\|Ga0209297_1114198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1145	Open in IMG/M
3300027743\|Ga0209593_10027579	All Organisms → Viruses → Predicted Viral	2263	Open in IMG/M
3300027785\|Ga0209246_10132959	Not Available	978	Open in IMG/M
3300027798\|Ga0209353_10134467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1108	Open in IMG/M
3300027805\|Ga0209229_10236802	Not Available	813	Open in IMG/M
3300027808\|Ga0209354_10356360	Not Available	575	Open in IMG/M
3300027808\|Ga0209354_10378531	Not Available	553	Open in IMG/M
3300031707\|Ga0315291_11593987	Not Available	509	Open in IMG/M
3300031772\|Ga0315288_10850432	Not Available	834	Open in IMG/M
3300031857\|Ga0315909_10016662	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7512	Open in IMG/M
3300031857\|Ga0315909_10473517	Not Available	873	Open in IMG/M
3300031951\|Ga0315904_10715172	Not Available	839	Open in IMG/M
3300031952\|Ga0315294_11532509	Not Available	520	Open in IMG/M
3300032050\|Ga0315906_10008262	Not Available	12502	Open in IMG/M
3300032050\|Ga0315906_11153403	Not Available	567	Open in IMG/M
3300032053\|Ga0315284_12294139	Not Available	534	Open in IMG/M
3300032093\|Ga0315902_10842484	Not Available	716	Open in IMG/M
3300032116\|Ga0315903_11126074	Not Available	536	Open in IMG/M
3300032143\|Ga0315292_10712526	Not Available	843	Open in IMG/M
3300032177\|Ga0315276_12400348	Not Available	530	Open in IMG/M
3300032256\|Ga0315271_11679940	Not Available	546	Open in IMG/M
3300032342\|Ga0315286_11073200	Not Available	796	Open in IMG/M
3300032342\|Ga0315286_11266015	Not Available	718	Open in IMG/M
3300033978\|Ga0334977_0446352	Not Available	596	Open in IMG/M
3300034019\|Ga0334998_0264091	Not Available	1037	Open in IMG/M
3300034019\|Ga0334998_0409535	Not Available	776	Open in IMG/M
3300034019\|Ga0334998_0444466	Not Available	734	Open in IMG/M
3300034092\|Ga0335010_0019117	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	5396	Open in IMG/M
3300034104\|Ga0335031_0191692	All Organisms → Viruses → Predicted Viral	1389	Open in IMG/M
3300034104\|Ga0335031_0742506	Not Available	557	Open in IMG/M
3300034112\|Ga0335066_0352403	Not Available	816	Open in IMG/M
3300034118\|Ga0335053_0163766	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1490	Open in IMG/M
3300034280\|Ga0334997_0015657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	5243	Open in IMG/M
3300034283\|Ga0335007_0199492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1390	Open in IMG/M
3300034283\|Ga0335007_0375696	Not Available	899	Open in IMG/M
3300034283\|Ga0335007_0590882	Not Available	644	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	68.27%
Marine	Environmental → Aquatic → Marine	31.73%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	32.69%
Lentic	Environmental → Aquatic → Freshwater → Lentic	22.12%
Coastal	Environmental → Aquatic → Marine → Coastal	16.35%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.42%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.77%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.04%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	20.19%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.35%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	13.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.77%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.96%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	18.27%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.46%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	13.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	8.65%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.65%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	7.69%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.88%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.96%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.96%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.96%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.96%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.96%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000843	Freshwater microbial communities from the Columbia River, along salinity gradients	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007177	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projects	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027210	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3 (SPAdes)	Environmental	Open in IMG/M
3300027213	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3 (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FwTDRAFT_1061193	3300000843	Freshwater And Marine	WGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0066179_101741961	3300004126	Freshwater Lake	LSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0069718_151927651	3300004481	Sediment	GVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLASSDVQS*
Ga0068876_106874142	3300005527	Freshwater Lake	DVVQPLLVFDTEHLREMLSRLRKGDIDREWGISEPPAEWQVDGAYLAEPDLYWRHLDSHLLRPQANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLIPQESTTSA*
Ga0070749_102505101	3300006802	Aqueous	TVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLASSDVQS*
Ga0070749_103451483	3300006802	Aqueous	GDIDRQWGVAGNPEGFQVEGAYLADPELYWRHLDSHVLRPVANRAGRIKHVWMKRNQKWPDHLHDCEIMQLTMVMLWNDLVTSQEPALLTS*
Ga0075467_101563421	3300006803	Aqueous	LSRLRKGDIDREWGVHQEPPTVQAEGAYLAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVPTPDN*
Ga0075464_100429284	3300006805	Aqueous	RKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAT*
Ga0075464_106175522	3300006805	Aqueous	RDILSRLRKGDIDREWGVHQDPPNVQAEGAYIADPDLYWRHLDSHILRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPEH*
Ga0075472_105176011	3300006917	Aqueous	KGDIDREWGICPTPPVLEAEGAYLADQELYWRHLDSHQLRPVANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLVQAAET*
Ga0102978_11090231	3300007177	Freshwater Lake	VQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPKVEVEGAYLAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLSPSSDG*
Ga0075458_101815901	3300007363	Aqueous	FGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVCPTPPVLEAEGAYLSDQELYWRHLDSHQLRPVANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLVQAAET
Ga0102861_10501853	3300007544	Estuarine	LSRLRKGDIDREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102873_11686421	3300007545	Estuarine	DREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102877_10810393	3300007548	Estuarine	GAYIADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102828_11482572	3300007559	Estuarine	FGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102918_12280692	3300007593	Estuarine	RKGDIDREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102876_10405091	3300007642	Estuarine	HQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102859_10948201	3300007708	Estuarine	LRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0105745_10963451	3300007972	Estuary Water	TDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0105746_10122364	3300007973	Estuary Water	MRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0105746_11131171	3300007973	Estuary Water	MRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0105746_12321851	3300007973	Estuary Water	RLRKGDIDREWGVHQDPPTVQAEGAYIADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSAPDH*
Ga0105746_13004672	3300007973	Estuary Water	VHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQS*
Ga0105746_13050262	3300007973	Estuary Water	DTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIPS*
Ga0105747_10609683	3300007974	Estuary Water	DMLSRLRKGDIDREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0105748_103537721	3300007992	Estuary Water	RKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0114341_103392853	3300008108	Freshwater, Plankton	PSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLASSDVQS*
Ga0102816_10782501	3300008999	Estuarine	GLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGSYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102829_12218252	3300009026	Estuarine	SSSMRTDVVQPLLVFDTEHLRDILSRLRKGDIDREWGVHQDPPSVQAEGAYIADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPDQ*
Ga0102864_11471372	3300009051	Estuarine	MRTDVVQPLLVFDTEHHRDMLSRLRKGGIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102860_10328771	3300009056	Estuarine	EWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0102860_11198032	3300009056	Estuarine	RTDVVQPLLVFDTEHLRDMLSRLRKGDSDREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0105098_100656261	3300009081	Freshwater Sediment	MRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQS*
Ga0105103_102964373	3300009085	Freshwater Sediment	QPLLVFDTEHLRDMLSRLRKGDIDREWGVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQS*
Ga0105091_106947412	3300009146	Freshwater Sediment	MLAVVVLRRLVCDTEHLRDMLSRLQKCDIDREWGVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQS*
Ga0114980_101300201	3300009152	Freshwater Lake	QPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0114968_104042631	3300009155	Freshwater Lake	DMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0114977_102015213	3300009158	Freshwater Lake	FDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0114966_105877241	3300009161	Freshwater Lake	MRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0105102_100528823	3300009165	Freshwater Sediment	SMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQS*
Ga0164293_108856212	3300013004	Freshwater	RDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0177922_100123572	3300013372	Freshwater	DMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAT*
Ga0177922_105759601	3300013372	Freshwater	DMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS*
Ga0181364_10126391	3300017701	Freshwater Lake	EWGVHQDPPNVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0181363_10618981	3300017707	Freshwater Lake	RKGDIDREWGVHQDPPTVQAEGAYIADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPDH
Ga0181363_10699052	3300017707	Freshwater Lake	HLREILSRLRKGDIDRDWGIHQSPPSVQAEGSYLADPETYWRHLDSHVLRPVANRAGRIKHVWMKRNQKWPDHLHDCEIMQLAMVMLWNELSGFSGELTQG
Ga0181350_10921952	3300017716	Freshwater Lake	GVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0181365_11004862	3300017736	Freshwater Lake	EHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0181352_10452503	3300017747	Freshwater Lake	EHLRDILARLRKGDIDREWGVHQDPPTVQAEGAYIAEPDLYWRHLDSHILRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLTMVMLWNDLVSAPDH
Ga0181344_11125963	3300017754	Freshwater Lake	DREWGVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLASSDVQS
Ga0181343_11381921	3300017766	Freshwater Lake	GDIDREWGVYPTPPVLEAEGAYLADQELYWRHLDSHQLRPVANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLVQTSET
Ga0181343_11710851	3300017766	Freshwater Lake	MRTDVVQPLLVFDTEHLRDILSRLRKGDIDREWGVHQQPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPDQ
Ga0181346_10881021	3300017780	Freshwater Lake	KRDMLSRLRKGDIDREWGVRQDPPNVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0181348_10839993	3300017784	Freshwater Lake	MRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0181563_103238161	3300018420	Salt Marsh	IDREWGVCPTPPVLDAEGAYLADQELYWRHLDSHQLRPVANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLVQAAET
Ga0211729_101122591	3300020172	Freshwater	LLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGTYIAEPDLYWRHLDSHVLRPQANRSGRIKHVWIKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0207939_10233572	3300020536	Freshwater	PFGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQQPPNVQAEGAYVADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTAA
Ga0207942_10061723	3300020549	Freshwater	QAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0208599_10203121	3300020554	Freshwater	PLLVFDTEHLRDMLSRLRKGDIDREWGVHQQPPNVQAEGAYVADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTAAE
Ga0222712_100038211	3300021963	Estuarine Water	FDTEHLRDMLSRLRKGDIDREWGVHQEPPTVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVPTPDN
Ga0181354_11199351	3300022190	Freshwater Lake	VQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSTESIAS
Ga0208546_10055001	3300025585	Aqueous	VFDTEHLRDMLSRLRKGDIDREWGVCPTPPVLEAEGAYLSDQELYWRHLDSHQLRPVANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLVQAAET
Ga0208916_100225441	3300025896	Aqueous	LSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0208802_10580642	3300027210	Estuarine	AVHPFGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0208555_10462701	3300027213	Estuarine	RDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0209769_12100722	3300027679	Freshwater Lake	SSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0209297_10305161	3300027733	Freshwater Lake	FGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0209297_11141981	3300027733	Freshwater Lake	FDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0209593_100275793	3300027743	Freshwater Sediment	SSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQEPPNVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQS
Ga0209246_101329593	3300027785	Freshwater Lake	MRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0209353_101344673	3300027798	Freshwater Lake	PSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0209229_102368021	3300027805	Freshwater And Sediment	IDREWGVHQEPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVQTPDH
Ga0209354_103563602	3300027808	Freshwater Lake	FGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0209354_103785311	3300027808	Freshwater Lake	VHPFGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0315291_115939872	3300031707	Sediment	PFGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAT
Ga0315288_108504321	3300031772	Sediment	RTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAT
Ga0315909_1001666213	3300031857	Freshwater	TDVVQPLLVFDTEHLREMLSRLRKGDIDREWGISEPPAEWQVDGAYLAEPDLYWRHLDSHLLRPQANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLIPQESTTSA
Ga0315909_104735173	3300031857	Freshwater	KGDIDREWGVHQEPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVQTPDH
Ga0315904_107151721	3300031951	Freshwater	ILSRLRKGDIDRDWGIHQNPPSVQAEGSYLADPETYWRHLDSHVLRPVANRAGRIKHVRMKRNQKWPDHLHDCEIMQLAMVMLWNELSGFSGELTQG
Ga0315294_115325092	3300031952	Sediment	VFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0315906_100082621	3300032050	Freshwater	PLLVFDTEHLREMLSRLRKGDIDREWGISEPPAEWQVDGAYLTEPDLYWRHLDSHLLRPQANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLIPQESTTSA
Ga0315906_111534031	3300032050	Freshwater	LVFDTEHLRDILSRLRKGDIDREWGIHQDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPDH
Ga0315284_122941391	3300032053	Sediment	EHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0315902_108424841	3300032093	Freshwater	GAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWDDLTSSDVQS
Ga0315903_111260741	3300032116	Freshwater	QPLLVFDTEHLRDMLSRLRKGDIDREWGVGIPPVLEVQGAYLADQDLYWRHLDSHQLRPVANRAGRIKHVWTKRNQKWPDHLHDCEIMQLAMVMLWNDLKTAEDAND
Ga0315292_107125263	3300032143	Sediment	RDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAT
Ga0315276_124003481	3300032177	Sediment	SMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0315271_116799402	3300032256	Sediment	REWGVHQDPPNVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAT
Ga0315286_110732002	3300032342	Sediment	FGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0315286_112660152	3300032342	Sediment	AVHPFGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0334977_0446352_353_595	3300033978	Freshwater	WGVHQQPPNVQAEGAYVADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPDH
Ga0334998_0264091_134_508	3300034019	Freshwater	VHPFGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQQPPNVQAEGAYVADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQS
Ga0334998_0409535_509_775	3300034019	Freshwater	IDRDWGIHQSPPSVQAEGSYLADPETYWRHLDSHVLRPVANRAGRIKHVWMKRNQKWPDHLHDCEIMQLAMVMLWNELSGFSGELTQG
Ga0334998_0444466_487_732	3300034019	Freshwater	EWGVHQQPPNVQAEGAYVADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPDH
Ga0335010_0019117_5161_5394	3300034092	Freshwater	QDPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQS
Ga0335031_0191692_1148_1387	3300034104	Freshwater	QDPPSVQAEGAYIADPELYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS
Ga0335031_0742506_146_520	3300034104	Freshwater	VHPFGLSTSSSMRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLASSDVQS
Ga0335066_0352403_46_387	3300034112	Freshwater	MRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLASSDVQS
Ga0335053_0163766_1012_1353	3300034118	Freshwater	MRTDVVQPLLVFDTEHLRDMLSRLRKGDIDREWGVHQEPPSVQAEGAYVADPDLYWRHLDSHLLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLTSSDVQP
Ga0334997_0015657_4894_5175	3300034280	Freshwater	MLSRLRKGDIDREWGVHQEPPSVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPDQ
Ga0335007_0199492_1064_1381	3300034283	Freshwater	VFDTEHLRDMLSRLRKGDIDREWGVHQDPPSVQAEGAYIADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIPS
Ga0335007_0375696_575_883	3300034283	Freshwater	VFDTEHLRDMLSRLRKGDIDREWGVHQQPPTVQAEGAYVADPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVSTPEQ
Ga0335007_0590882_321_638	3300034283	Freshwater	VFDTEHLRDMLSRLRKGDIDREWGVHQDPPNVQAEGAYIAEPDLYWRHLDSHVLRPQANRAGRIKHVWVKRNQKWPDHLHDCEIMQLAMVMLWNDLVTSSESIAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096910

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences