NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096871

Metagenome Family F096871

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096871
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 49 residues
Representative Sequence MWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLFIIRLVLQKLKHVR
Number of Associated Samples 82
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 12.50 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.96 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (97.115 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(22.115 % of family members)
Environment Ontology (ENVO) Unclassified
(76.923 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(82.692 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.14%    β-sheet: 0.00%    Coil/Unstructured: 42.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF11753DUF3310 65.38
PF09889DUF2116 11.54
PF01612DNA_pol_A_exo1 8.65
PF07486Hydrolase_2 3.85
PF01870Hjc 1.92
PF01381HTH_3 0.96
PF08774VRR_NUC 0.96
PF01583APS_kinase 0.96
PF12705PDDEXK_1 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 3.85
COG1591Holliday junction resolvase Hjc, archaeal typeReplication, recombination and repair [L] 1.92
COG0529Adenylylsulfate kinase or related kinaseInorganic ion transport and metabolism [P] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.12 %
All OrganismsrootAll Organisms2.88 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002098|JGI24219J26650_1000903Not Available10009Open in IMG/M
3300007734|Ga0104986_1638All Organisms → cellular organisms → Bacteria20519Open in IMG/M
3300007734|Ga0104986_1960Not Available61750Open in IMG/M
3300007735|Ga0104988_10905Not Available37871Open in IMG/M
3300009158|Ga0114977_10006348Not Available7511Open in IMG/M
3300011114|Ga0151515_10172Not Available30475Open in IMG/M
(restricted) 3300013126|Ga0172367_10001152All Organisms → cellular organisms → Bacteria39577Open in IMG/M
3300021961|Ga0222714_10132578All Organisms → cellular organisms → Bacteria1521Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake22.12%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake18.27%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.58%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater9.62%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater7.69%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic3.85%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.85%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton2.88%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water2.88%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.92%
LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic1.92%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.92%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.92%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.92%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.96%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton0.96%
Freshwater And MarineEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine0.96%
AquaticEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic0.96%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.96%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000882Freshwater microbial communities from the Columbia RiverEnvironmentalOpen in IMG/M
3300001836Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM27, ROCA_DNA191_0.2um_MCP-N_C_3aEnvironmentalOpen in IMG/M
3300001838Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2aEnvironmentalOpen in IMG/M
3300002098Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenomeEnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003787Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09EnvironmentalOpen in IMG/M
3300003796Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09EnvironmentalOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300004686Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)EnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300006072Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09EnvironmentalOpen in IMG/M
3300006116Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007734Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015JanEnvironmentalOpen in IMG/M
3300007735Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014OctEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300007974Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2umEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011114Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016FebEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014811Aquatic viral communities from ballast water - Michigan State University - AB_ballast waterEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300019783Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020179Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0mEnvironmentalOpen in IMG/M
3300020196Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0mEnvironmentalOpen in IMG/M
3300021091Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40mEnvironmentalOpen in IMG/M
3300021093Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surfaceEnvironmentalOpen in IMG/M
3300021115Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 epilimnionEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300025372Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)EnvironmentalOpen in IMG/M
3300025379Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)EnvironmentalOpen in IMG/M
3300025429Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)EnvironmentalOpen in IMG/M
3300025466Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)EnvironmentalOpen in IMG/M
3300027365Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300034064Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
FwDRAFT_1009234643300000882Freshwater And MarineMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLFIIRLVLQKLKHVR*
RCM27_103341013300001836Marine PlanktonLRKRTTIMWLFRFGLISGVMVGLELKFLEEEAPYVFSLVLDIFIVRLLIQKMKFNVR*
RCM27_106773233300001836Marine PlanktonMWLFRLALISGVMLGLELKFLEEEAPYVFSVVLDLLIIRVVIQKMKFNVR*
RCM33_105664923300001838Marine PlanktonGLISGVMVGLELKFLEEEAPFVFSLVLDIFIVRLLIQKMKFNVR*
JGI24219J26650_100090373300002098LenticMWVYGLGLISGVMVGLELKFLEEDVDFSLVIDLFIIRLILSKLKHVR*
JGI24219J26650_102891323300002098LenticMWVFQLGLISGVMVGLELKFLEEHYDFSMVIDLFIIRLVLQKLKYVR*
JGI25908J49247_1015892023300003277Freshwater LakeMWVFQLALISGVMVGLELRYLEDDAPYHFSIVIDLFIFRLILQKLKHVR*
JGI25908J49247_1016240613300003277Freshwater LakeMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLFIIRLILQKLKH
Ga0007811_100293443300003787FreshwaterMYLFNMGLISGVMLGLEIKFLDEDVPYAFSIVIDLLIIRLVFQKLYDVR*
Ga0007811_101514213300003787FreshwaterMYLFNMGLISGFMVGLEIKFLEEDVPYAFSIVVDLLIIRLVFQKLYDVR*
Ga0007865_102893313300003796FreshwaterMYLFNMGLISGFMVGLEIKFLEEDVPYAFSIVVDLLIIRLVFQKLYD
Ga0031655_1002403373300003852Freshwater Lake SedimentMYLFRLALISGVMVGLELKFLEEEAPYVFSLVLDIFIVRLVIQKMKFDVR*
Ga0065173_103731013300004686FreshwaterMYLFNMGLISGFMVGLEIKFLEEDVPYAFSIVIDLLIIRLVFQKLYVR*
Ga0049081_1004564443300005581Freshwater LenticMWAHSIALISGVMVGLELRFAEKQAPFYFSLVIDLFIIRLVLQKLKPCPTTQTTPKTG*
Ga0049081_1004709123300005581Freshwater LenticMWIFQLALISGVMVGLELRFLEERGPYSFSLVIDLFIIRLILQKLKHVR*
Ga0049081_1004827443300005581Freshwater LenticMWVFQLALISGVMVGLELRYLEDDTPYHFSLVIDLLIIRLVLQKLKHVR*
Ga0007881_113827013300006072FreshwaterMYLFNMGLISGVMLGLEIKFLDEDVPYAFSIVIDLLIIRLVFQKLYDVR*CR
Ga0007807_108325833300006116FreshwaterMYLFNMGLISGVMLGLEIKFLDEDVPYAFSIVIDLLIIRLVFQKLYDVR*CRYNSRKT*
Ga0075464_1019424033300006805AqueousMWVFQLALISGVMVGLELRYLEDDEPYHFSLVIDLLIIRLVLQKLKHVR*
Ga0070748_134079433300006920AqueousMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLFIIRLVLQKLKHV
Ga0104986_1638253300007734FreshwaterMWVFQLALISGVMVGLEIRYLEEEMPYKVSIVIDLFIIRLILQKLKHVR*
Ga0104986_1960283300007734FreshwaterMWVFQLALISGVMVGLELKFLEEEAPYTFSLVIDLFIIRLILQKLKYVR*
Ga0104988_10905273300007735FreshwaterMWVFQLGLISGVMVGLELKFLEEDAPYIFSLVIDLFIIRLVIQKLKYVR*
Ga0105746_103598343300007973Estuary WaterMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLFIIRLILQKLKHVR*
Ga0105746_130210423300007973Estuary WaterMWVFQLALISGVMVGLELKFLEEDAPYTFSLVIDLLIIRLVLQKLKYVR*
Ga0105747_122991433300007974Estuary WaterMWEFQIALISGDMVGLELRYLEDDAPYHFSLVIDLFIIRLILQKLKHVR*
Ga0114363_106021823300008266Freshwater, PlanktonMWVYELGLISGVMVGLELKFLEEEAPYVFSLVLDLFIIRLIVQKLKYVR*
Ga0114973_1003372643300009068Freshwater LakeMWVFNLALISGVMLGLELRYLEDDEPYHFSLVIDLFIIRLVLQKLKHVR*
Ga0114973_1003727353300009068Freshwater LakeMYLFNMGLISGVMLGLEIKFLDEDVPYAFSIVIDLLIIRFVFQKLYDVR*
Ga0114973_1067547613300009068Freshwater LakeKRSSKFKIMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLLIFRLILQKLKHVR*
Ga0105103_1011298823300009085Freshwater SedimentMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLLIIRLILQKLKHVR*
Ga0114962_1039060133300009151Freshwater LakeMWVFQLALISGVMLGLELRYLEDDAPYHFSLVIDLFIIRLILQKLKHVR*
Ga0114980_1007920423300009152Freshwater LakeMWVFNLALISGVMVGLELKFLEKNAPYTFSLVIDLFIIRLILQKLKYVR*
Ga0114968_1002238883300009155Freshwater LakeMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLLIFRLILQKLKHVR*
Ga0114968_1009019343300009155Freshwater LakeMWVFQLALISGVMVGLELRFLEEREPYSFSLVIDLFIIRLIIQKLKHVR*
Ga0114968_1045265433300009155Freshwater LakeMWVFQLALISGVMLGLELKYLEDDAPYHFSLVIDLFIIRLILQKLKHVR*
Ga0114977_10006348113300009158Freshwater LakeMWIFQLALISGVMIGLELRYLEDDEPYHFSLVIDLLIIRLVLQKLKHVR*
Ga0114966_1020093543300009161Freshwater LakeMWVFQLALISGVMIGLELRFLEEEAPYTFSLVIDLFIIRLILQKLKYVR*
Ga0105102_1007355243300009165Freshwater SedimentMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLLIIRLVLQKLKHVR*
Ga0114974_1029694433300009183Freshwater LakeMWVFQLALISGVMVGLELRFLEEREPYSFSLVIDLFIIRLILQKLKHVR*
Ga0114974_1046188533300009183Freshwater LakeMWVFQLALISGVMIGLELRFLEEEAPYTFSLVIDLFIIRLI
Ga0114982_103062023300009419Deep SubsurfaceMWVFQLALISGIMVGLELRYLEDDAPYHFSLVIDLLIIRLVLQKLKHVR*
Ga0114967_1064656523300010160Freshwater LakeMWVFNLALISGVMVGLELRYLEDDEPYHFSLVIDLFIIRLVLQKLKHVR*
Ga0129333_1062046723300010354Freshwater To Marine Saline GradientMWIFQLALISGVMVGLELKFLEEDAPYTFSLVIDLFIIRLVLQKLKYVR*
Ga0133913_1002691783300010885Freshwater LakeMWVFRLALISGVMVGFELRFLEERAPFKFSLVVDLFIIRLIIQKLT*
Ga0133913_1042442053300010885Freshwater LakeMWVFNVGLISGVMVGLELKFLEEEAYYDFSLVVDLFIIRIVIQKLKHV*
Ga0151515_10172223300011114FreshwaterMWFFHLALISGVMVGLELKFLEEDTPYVFSLVIDLFIIRLVVQKIKHVR*
Ga0164293_1009055563300013004FreshwaterMWVFQLALISGVMVGLELRYLEDEAPYHFSLVIDLFIIRLILQKLKHVR*
Ga0164293_1034989133300013004FreshwaterMWVFQLALISGVMVGLELRYLEDDTPYHFSLVIDLLIIRLILQKLKHVR*
Ga0164293_1105646023300013004FreshwaterMWVFQLALISGVMVGLELKFLEKDAPYTFSLVIDLFIIRLVLQKLK
(restricted) Ga0172367_10001152353300013126FreshwaterMWVFQLALISGVMVGLELKFLEEDAPYVFSLVLDLFIIRLVIQKLKYVR*
Ga0177922_1060226633300013372FreshwaterMWVFQLALISGVMVGLELKYLEDDTPYHFSLVIDLLIIRLVLQKLKHVR*
Ga0119960_105284923300014811AquaticMWVFSVGLISGVMVGLELKFLEEEAYYDFSLVVDLFIIRIVIQKLKHV*
Ga0181350_111244233300017716Freshwater LakeMWAHSIALVSGVMVGLELRFAEKQAPFYFSLVIDLFIIRLVLQKLKPCP
Ga0181352_100487983300017747Freshwater LakeMWVFQLALISGVMVGLELKFLEKDAPYTFSLVIDLFIIRLVLQ
Ga0181344_107051133300017754Freshwater LakeMWVFSLALISGVMVGLELKFLEEDAPYTFSLVIDLLIIRLVLQKLKYVR
Ga0181356_115150213300017761Freshwater LakeMLAYSIALISGVMVGLELRFAEKQAPFYFSLVIDLFIIRLVLQKLKPCPTTQTT
Ga0181343_103623113300017766Freshwater LakeMWVFQLALISGVMVGLELRYLEDDTPYHFSLVIDLLIIR
Ga0181358_104851243300017774Freshwater LakeMLAYSIALISGVMVGLELRFAEKQAPFYFSLVIDLFIIRLVLQKLKPCPTTQTTPKTG
Ga0181357_125044213300017777Freshwater LakeMWVFQLALISGVMLGLELRYLEDDAPYHFSLVIDLFIIRLILQKLKHV
Ga0181349_124949913300017778Freshwater LakeMWAYSIALISGVMVGLELRFAEKQAPFYFSLVIDL
Ga0181346_109720933300017780Freshwater LakeMWVFQLALISGVMVGLEFRYLEDDTPYHFSLVIDLLIIRLVLQKLKHVR
Ga0181348_107549133300017784Freshwater LakeMWVFQLALISGVMVGLELRYLEDDTPYHFSLVIDLFIIRLILQKLKICQMTQIKRKTD
Ga0181361_10164743300019783Freshwater LakeMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLFIIRLILQKLKHVR
Ga0211736_1069578523300020151FreshwaterMWVFQLALISGVMVGLELRYLEDEAPYHFSLVIDLFIIRLVLQKLKHVR
Ga0211734_1014841323300020159FreshwaterMWVFQLALISGVMVGLELRYLEDEAPYHFSLVIDLFIIRLILQKLKHVR
Ga0211733_1060435343300020160FreshwaterMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLLIIRLVLQKLKHVR
Ga0211735_1146884963300020162FreshwaterMWVFQLALISGVMVGLELRYLEDDEPYYFSLVIDLLIIRLVLQKLK
Ga0211729_1030506053300020172FreshwaterMWAYRIALISGVMVGLELRFAEKQAPFYFSLVIDLFIIRLVLQKLKPCPTTQTTPKTG
Ga0211729_1110743953300020172FreshwaterMWVFQLALISGVMVGLELRYLEDEAPYHFSLVIDLLIIRLVLQKLKHVR
Ga0194134_1029634023300020179Freshwater LakeMWIFKLALISGVMIGLELKFLEEDVPYVFSLVLDLFIIRLVVQKLKYVR
Ga0194124_1038507113300020196Freshwater LakeMWIFKLALISGVMIGLELKFLEEDVPYVFSLVLDLFIIRLVV
Ga0194133_1011217643300021091Freshwater LakeMWIFKLALISGVMVGLELKFLEEDVPYVFSLVLDLFIIRLVVQKLKYVR
Ga0194123_1049408713300021093Freshwater LakeMWIFKLALISGVMIGLELKFLEEDVPYVFSLVLDLFIIRLVVQ
Ga0214174_11253423300021115FreshwaterMYLFRLALISGVMVGLELKFLEEEAPYVFSLVLDIFIVRLVIQKMKFDVR
Ga0222714_1013257843300021961Estuarine WaterMWVFQLALISGVMIGLELRYLENDAPYHFSLVIDLIIIRLVIQKLKYVR
Ga0222713_1055010213300021962Estuarine WaterMWVFQLALISGVMVGLELKFLEEDAPYTFSLVIDLL
Ga0181353_103239643300022179Freshwater LakeMWVFSLALISGVMVGLELKFLEEDAPYTLSLVIDLFIIRLVLQKIKYVR
Ga0181353_105827733300022179Freshwater LakeMWVFQLALISGVMVGLELRYLEDDTPYHFSLVIDLLIIRLILQKLKHVR
Ga0181354_110148713300022190Freshwater LakeMWAHSIALVSGVMVGLELRFAEKQAPFYFSLVIDLFIIRLVLQKL
Ga0181351_105068443300022407Freshwater LakeMWAHSIALISGVMVGLELRFAEKQAPFYFSLVIDLFIIRLVLQKLKPCPTTQTTPKTG
Ga0181351_111466343300022407Freshwater LakeMWAHSIALVSGVMVGLELRFAEKQAPFYFSLVIDLFIIRLVLQKLKPCPTTQTTPKTG
Ga0181351_112365223300022407Freshwater LakeMWVFNLALISGVMIGLELKFLEKNAPYTFSLVIDLFIIRLILQKLKYVR
Ga0214923_1011127643300023179FreshwaterMWVFNLALISGVMVGLELKFLEKNAPYTFSLVIDLFIIRLILQKLKYVR
Ga0214919_1015521413300023184FreshwaterMWVFNLALISGVMVGLELRYLEDDEPYHFSLVIDLLIIRLVLQKLKHVR
Ga0214919_1072113223300023184FreshwaterMWISNIALISGVMVGLELKFLDEEAYYDFSLVIDLFIVRIVIQKLKHVR
Ga0207957_100793633300025372FreshwaterMYLFNMGLISGVMLGLEIKFLDEDVPYAFSIVIDLLIIRLVFQKLYDVR
Ga0208738_100621943300025379FreshwaterMYLFNMGLISGFMVGLEIKFLEEDVPYAFSIVVDLLIIRLVFQKLYDVR
Ga0208500_103661433300025429FreshwaterMYLFNMGLISGVMLGLEIKFLDEDVPYAFSIVIDLLIIRLVFQKLYDVRXCRYNSRKTXERRSNK
Ga0208497_104973043300025466FreshwaterMYLFNMGLISGFMVGLEIKFLEEDVPYAFSIVIDLLIIRLVFQKLYVR
Ga0209300_107332213300027365Deep SubsurfaceVFQLALISGVMVGLELRYLEDDTPYHFSLVIDLLIIRLVLQKLKHVR
Ga0208974_100154473300027608Freshwater LenticMWIFQLALISGVMVGLELRFLEERGPYSFSLVIDLFIIRLILQKLKHVR
Ga0209297_100759493300027733Freshwater LakeMWIFQLALISGVMIGLELRYLEDDEPYHFSLVIDLLIIRLVLQKLKHVR
Ga0209190_101083743300027736Freshwater LakeMYLFNMGLISGVMLGLEIKFLDEDVPYAFSIVIDLLIIRFVFQKLYDVR
Ga0209084_129111233300027749Freshwater LakeMWVFQLALISGVMLGLELRYLEDDAPYHFSLVIDLFIIRLILQKLKHVR
Ga0209596_101115813300027754Freshwater LakeMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLLIFRLILQKLKHVR
Ga0209596_123383333300027754Freshwater LakeMWVFQLALISGVMIGLELRFLEEEAPYTFSLVIDLFIIRLILQKLKYVR
Ga0209296_136246223300027759Freshwater LakeMWVFQLALISGVMVGLELRFLEEREPYSFSLVIDLFIIRLILQKLKHVR
Ga0209777_1082816923300027896Freshwater Lake SedimentMYLFNMGLISGFMVGLEIKFLEEDVPYAFSVVVDLLIIRLVFQKLYDVR
Ga0209401_102603543300027971Freshwater LakeMWVFNLALISGVMVGLELRYLEDDEPYHFSLVIDLFIIRLVLQKLKHVR
Ga0209298_1007493933300027973Freshwater LakeMWVFQLALISGVMVGLELRYLEDDAPYHFSLVIDLLIFRLILQKLKYVR
Ga0315900_1074716523300031787FreshwaterMWVYELGLISGVMVGLELKFLEEEAPYVFSLVLDLFIIRLVLQKLKYVR
Ga0315902_1081471613300032093FreshwaterMWVFQLGLISGVMVGLELKFLEEEAPYVFSLVLDLFIIR
Ga0335001_0021724_3303_34493300034064FreshwaterMWISNLALISGVMVGLELKFLEEEAYYDFSLVIDLFIIRIVIQKLKHV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.