Metagenome Family F096858

Basic Information
Family ID	F096858
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	86 residues
Representative Sequence	MKRCLSKFGGSLMALALIGVMSLGVLAGPRPFHLVEHGNLTVTPRDQSGTVLDVVAEGVGTATHLGVITVERTATLTATSTPGVFD
Number of Associated Samples	84
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.99 %
% of genes near scaffold ends (potentially truncated)	91.35 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Bacteria (60.577 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (58.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (71.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.93% β-sheet: 14.04% Coil/Unstructured: 64.04%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07366	SnoaL	37.50
PF03551	PadR	7.69
PF05721	PhyH	4.81
PF13231	PMT_2	1.92
PF00535	Glycos_transf_2	0.96
PF04945	YHS	0.96
PF12680	SnoaL_2	0.96
PF13419	HAD_2	0.96
PF13745	Obsolete Pfam Family	0.96
PF05090	VKG_Carbox	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	7.69
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	7.69
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	7.69
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.58 %
Unclassified	root	N/A	39.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.58 %
Unclassified	root	N/A	39.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.58 %
Unclassified	root	N/A	39.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.96 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.96 %
Alkaliphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Alkaliphilus	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Alkaliphilus hydrothermalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Alkaliphilus → Alkaliphilus hydrothermalis	0.96 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	0.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_10011901	Not Available	514	Open in IMG/M
3300003267\|soilL1_10011963	All Organisms → cellular organisms → Bacteria → Acidobacteria	6795	Open in IMG/M
3300003267\|soilL1_10015264	All Organisms → cellular organisms → Bacteria	9158	Open in IMG/M
3300003319\|soilL2_10004911	All Organisms → cellular organisms → Bacteria	6393	Open in IMG/M
3300004081\|Ga0063454_100550646	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300004156\|Ga0062589_102212310	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	563	Open in IMG/M
3300004156\|Ga0062589_102770089	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300004157\|Ga0062590_101102307	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300004480\|Ga0062592_102226250	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005288\|Ga0065714_10293399	Not Available	705	Open in IMG/M
3300005293\|Ga0065715_10641522	Not Available	684	Open in IMG/M
3300005293\|Ga0065715_10647911	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005295\|Ga0065707_10197735	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300005295\|Ga0065707_10256643	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005330\|Ga0070690_100499247	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300005332\|Ga0066388_102887706	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005338\|Ga0068868_101890680	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005343\|Ga0070687_100197986	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300005345\|Ga0070692_10945510	Not Available	599	Open in IMG/M
3300005355\|Ga0070671_102046963	Not Available	510	Open in IMG/M
3300005364\|Ga0070673_102402763	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005441\|Ga0070700_100501660	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005444\|Ga0070694_100737113	Not Available	804	Open in IMG/M
3300005459\|Ga0068867_102001678	Not Available	548	Open in IMG/M
3300005459\|Ga0068867_102396906	Not Available	502	Open in IMG/M
3300005544\|Ga0070686_101418091	Not Available	583	Open in IMG/M
3300005545\|Ga0070695_100437936	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300005546\|Ga0070696_101410307	Not Available	594	Open in IMG/M
3300005547\|Ga0070693_100028717	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300005577\|Ga0068857_101677143	Not Available	621	Open in IMG/M
3300005578\|Ga0068854_100134621	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300005578\|Ga0068854_100843512	Not Available	802	Open in IMG/M
3300005615\|Ga0070702_100374742	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300005616\|Ga0068852_100276272	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300005617\|Ga0068859_100934711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	951	Open in IMG/M
3300005617\|Ga0068859_101352169	Not Available	785	Open in IMG/M
3300005618\|Ga0068864_102707092	Not Available	502	Open in IMG/M
3300005841\|Ga0068863_101024910	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005841\|Ga0068863_101858159	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005844\|Ga0068862_101017650	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300006806\|Ga0079220_10247088	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300006844\|Ga0075428_102327455	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009093\|Ga0105240_11483138	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300009093\|Ga0105240_12206053	Not Available	571	Open in IMG/M
3300009174\|Ga0105241_10546506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Alkaliphilus → Alkaliphilus hydrothermalis	1039	Open in IMG/M
3300009174\|Ga0105241_11641826	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300009174\|Ga0105241_12614977	Not Available	507	Open in IMG/M
3300009177\|Ga0105248_10824349	Not Available	1047	Open in IMG/M
3300009177\|Ga0105248_10901783	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300009553\|Ga0105249_12241681	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300009553\|Ga0105249_13346777	Not Available	516	Open in IMG/M
3300010036\|Ga0126305_10818635	Not Available	634	Open in IMG/M
3300010041\|Ga0126312_11380304	Not Available	522	Open in IMG/M
3300010047\|Ga0126382_10685677	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	857	Open in IMG/M
3300010047\|Ga0126382_11535160	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010362\|Ga0126377_13395969	Not Available	515	Open in IMG/M
3300010375\|Ga0105239_10820683	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300010397\|Ga0134124_10992935	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300010397\|Ga0134124_12650975	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010397\|Ga0134124_13005301	Not Available	515	Open in IMG/M
3300010401\|Ga0134121_12480869	Not Available	560	Open in IMG/M
3300011119\|Ga0105246_12217585	Not Available	535	Open in IMG/M
3300012955\|Ga0164298_10575644	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300013100\|Ga0157373_11143890	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300013102\|Ga0157371_10460568	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300013297\|Ga0157378_10196946	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300013297\|Ga0157378_11327917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300013306\|Ga0163162_12973346	Not Available	545	Open in IMG/M
3300013307\|Ga0157372_12355166	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300013308\|Ga0157375_10780584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300014325\|Ga0163163_11432466	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300014326\|Ga0157380_12599063	Not Available	572	Open in IMG/M
3300014745\|Ga0157377_11615925	Not Available	520	Open in IMG/M
3300014968\|Ga0157379_10761281	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300015262\|Ga0182007_10164634	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300015374\|Ga0132255_105576911	Not Available	532	Open in IMG/M
3300018476\|Ga0190274_10731419	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300025904\|Ga0207647_10052789	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300025908\|Ga0207643_11115791	Not Available	509	Open in IMG/M
3300025911\|Ga0207654_10230658	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300025914\|Ga0207671_11571133	Not Available	506	Open in IMG/M
3300025935\|Ga0207709_10969702	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300025981\|Ga0207640_10074909	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300026035\|Ga0207703_10660548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300026041\|Ga0207639_12162782	Not Available	518	Open in IMG/M
3300026088\|Ga0207641_10730278	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300026088\|Ga0207641_11446211	Not Available	689	Open in IMG/M
3300026095\|Ga0207676_11884498	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300026116\|Ga0207674_10750609	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300026142\|Ga0207698_10074681	All Organisms → cellular organisms → Bacteria	2706	Open in IMG/M
3300026142\|Ga0207698_12333480	Not Available	547	Open in IMG/M
3300028380\|Ga0268265_11667179	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300031548\|Ga0307408_100018943	All Organisms → cellular organisms → Bacteria	4627	Open in IMG/M
3300031716\|Ga0310813_11764297	Not Available	581	Open in IMG/M
3300031720\|Ga0307469_11517011	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031901\|Ga0307406_10021382	All Organisms → cellular organisms → Bacteria → Acidobacteria	3825	Open in IMG/M
3300032013\|Ga0310906_11354727	Not Available	521	Open in IMG/M
3300032075\|Ga0310890_11134432	Not Available	634	Open in IMG/M
3300033412\|Ga0310810_11497776	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.58%
Environmental	Environmental	39.42%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.58%
Terrestrial	Environmental → Terrestrial	39.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	31.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.88%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	26.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.96%
Loam	Environmental → Terrestrial → Soil → Loam	11.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	26.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	11.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	9.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_100119011	3300000953	Soil	MKRYLSKFGSNLKALTLIGVMSLTAFAGPRPFHLVEHGNLTATPRDRSGSVLDVVAHGSGTATHLGSITVERTAVLTATGTPGVFDFNGQATL
soilL1_100119633	3300003267	Sugarcane Root And Bulk Soil	MKRCLSKFGGSLLAVALIGIMSLTVLAGPRPFHLVEHGNLTVTPRDQSGTVLDVVAEGVGTATHLGVITVERTATLT
soilL1_100152645	3300003267	Sugarcane Root And Bulk Soil	MKRYFSKFGSGLIALTLIGIISLTALAGVRPFHLVEHGQLTATPRDTSGSVLDVVAEGSGTATHLGSITVQRTATLTATDTPGVFDFKG
soilL2_1000491111	3300003319	Sugarcane Root And Bulk Soil	MKRYFSKFGSGLIALTLIGIISLTALAGVRPFHLVEHGQLTATPRDRSGSVLDVVAEGSGTATHLGSITVQRTATLTATDTPGVFDFKG
Ga0063454_1005506461	3300004081	Soil	MKRCLSKFGGGLMALALIGVMSLAAVAGPRPFHLVEHGNLTVTPRDASGTVLDVVAEGVGTPTHLGVITVERTATLTATSSPGIF
Ga0062589_1022123101	3300004156	Soil	MKRYLSKFGRNLKALTLIGVMSLTVLAGPRPFHLVEHGKITATPRDQSGTVLDVVANGTGTATHLGAITVERTAVLTATSTPGVFDFNGEATLTAATGEQL
Ga0062589_1027700891	3300004156	Soil	MKRYFSKFGSGLIALTLMGVMSLTALAGARPFHLVEHGRLTATPRDRSGTVLDVVAQGAGTATHLGAITV
Ga0062590_1011023072	3300004157	Soil	MKRYLSKFGGSVLALALLVGMCLTVIATPHPLHLVEHGQISATPRDASATVLDVVAHGTGTATHLGAITVERTATLTATDAPGIFDFEGDAI
Ga0062592_1022262501	3300004480	Soil	MKRNLFRISIGIITLALMAVTALAVSRPFHLVEHGKLTATPRDASGAILDLVADGIGTATHLGLITVHREATLTATSTTGIFDIKGTATLTAASGE
Ga0065714_102933992	3300005288	Miscanthus Rhizosphere	MKSFLFKNLLGLALVCAVSLTTLAGPRPFHLVEHGWITATPRDASGAVLDVVSNGTGTATHLGAISVERTATLTATNTPGVFDFKGQATLTAAS
Ga0065712_108360121	3300005290	Miscanthus Rhizosphere	MKHYFFKNLLGLALIGVISLTALAGPRPFHLVEHGWISATPRDASGTVLDVVSNGTGTATHL
Ga0065715_106415222	3300005293	Miscanthus Rhizosphere	MKRYLTIFASSLTALALTGVMSLTVLASARPFHLVEHGQLYVTPRDASGTVLDVVAEGVGTATHLGAITVQRTATLTATQAAGVF
Ga0065715_106479111	3300005293	Miscanthus Rhizosphere	MKHYLSKFGSTLMALAVVGVISLTVFAGARPFHLVEHGQLTVTPRDQSGAVLDVVANGVGTATHLGAITVQRTAVLTATNTPGIFDFNGEATLTAATGE
Ga0065707_101977353	3300005295	Switchgrass Rhizosphere	MKRYLSKFGGSVLALALLVGMCLTVIATPHPLHLVEHGQISATPRDASGTVLDVVAHGTGTATHLGAITVERTATLT
Ga0065707_102566432	3300005295	Switchgrass Rhizosphere	MKSYLSKFGTHLMAVSLIGAMSLTALAAPRPFHLVEHGLITATPRDASGTVLDVVASGAGTATHLGAITVERTATLTATSTPGIFDFKGEAVLT
Ga0070690_1004992471	3300005330	Switchgrass Rhizosphere	MNRFLFKNLLGLALIAVVSLTALAGPRPFHLVEHGLISATPRDASGTLLDVVASGGGTATHLGAIQVQRTATLTATATPGVFDFKGEATL
Ga0066388_1028877061	3300005332	Tropical Forest Soil	MKRYLHKFSSILMALALMGGMSLTTLAGPRPFHLVEHGLITATPRDPSGTILDVVASGSGTATHLGAITVERTATLTATATPGVFDFKGDAVLTAAT
Ga0068868_1018906801	3300005338	Miscanthus Rhizosphere	MKRCLSKCGVSLMAVALIAVMSLTVLAGPRPFHLVEHGNLTVTPRDQSGTVLDVVAEGVGTATHLGVITVERTATLTATATPGIFDFNGEAT
Ga0070687_1001979863	3300005343	Switchgrass Rhizosphere	MKRYLSKFGSSVLALALLVGMCLTVIATPHPLHLVEHGQISATPRDASGTVLDVVAHGTGTATHLGAITVERTATLTATDAPGIFDFEGDAILTSAS
Ga0070692_109455102	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKHYFFKNLLGLALIGVISLTALAVPRPFHLVEHGWITATPRDASGTVLDVVSNGTGTATHLGAISVERTATLTATSTPGVFAF
Ga0070671_1020469631	3300005355	Switchgrass Rhizosphere	MKRYLSKCCGSLMALALIAVMSLSVLAGPRPFHLVEHGNLTVSPRDASGTVLDVVANGVGTATHLGVITVERTATLTATSTPGVFDFN
Ga0070673_1024027631	3300005364	Switchgrass Rhizosphere	MKRILFLFGRNLMALALTGVVSVVALAGPRPFHLVEHGQITATPRDASGTVLDVVATGTGTATH
Ga0070700_1005016601	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKHFLFKNLLGLALIGVVSLTALADPRPFHLVEHGWISATPRDASGTLLDVVASGGGTATHLGAIQVQRTATLTATSTPGVFDFKGEATL
Ga0070694_1007371132	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKRYLTIFASSLTALALTGVMSLTVLAGARPFHLVEHGQLYVTPRDASGTVLDVVAEGVGTATHLGAITVQRTATLTATQAAGVFDFKGEATLT
Ga0068867_1020016781	3300005459	Miscanthus Rhizosphere	MKHFLFKNLLGLALIGVVSLTTLAGPRPFHLVEHGWISATPRDASGAVLDVVASGGGTATHLGAITVQRTATLTATATPGVFDFKGE
Ga0068867_1023969061	3300005459	Miscanthus Rhizosphere	MKRCLSKFGGSLMALALIGVMSLGVLAGPRPFHLVEHGNLTVTPRDQSGTVLDVVAEGVGTATHLGVITVERTATLTATSTPGVFDFNGQAVLTAA
Ga0070686_1014180912	3300005544	Switchgrass Rhizosphere	MKRYLSKFGGSVLALALLVGMCLTVIATPHPLHLVEHGQISATPRDASGTVLDVVAHGTGTATHLGAITVERTATLTATDAPGIFDFEGDAILTSASGDQLFTEIHGTF
Ga0070695_1004379362	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKRYLSIFGSRLMALALTGVMSLTVLAGARPFHLVEHGQLSVTPRDGSGTVLDVVAEGVGTATHLGAITVQRTATLTATSTPGVFDFNGEATLTAASGE
Ga0070696_1014103071	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKHYLSKFGTSLLALALVGAVSLTALANARPFHLVEHGQLQATPRDQSGTVLDVVANGVGTATHLGAITVQRTAVLTATSTPGIFDFNGEA
Ga0070693_1000287171	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MALALLGLSSPTIFANPRPFHLVEFGKITATPRDQSGTILDVVANGVGTATHLGAITVERTATLTATNTPGIFDFNGDATLTAANGD
Ga0068857_1016771431	3300005577	Corn Rhizosphere	MKYYLSRFGTTIALVVAISLTALAGARPFHLVEHGQLQVTPRDASGTVLDVYAEGVGTATHLGAITVERTATLTATSTPGVFDFNGEAVLTAASG
Ga0068854_1001346211	3300005578	Corn Rhizosphere	MKRFLFKNLVGLVLIGVVSLTALAGPRPFHLVEHGWISATPRDASGTLLDVVASGGGTATHLGAIQVQRTATLTATATPGVFDFKGEAT
Ga0068854_1008435123	3300005578	Corn Rhizosphere	MKHFLFKNLLGLALIGVVSLTTLAGPRPFHLVEHGLISATPRDASGAVLDVVASGGGTATHLGAITVQRTATLTATATPGVFDFKGE
Ga0070702_1003747421	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKRYLSKFGRNLKALTLIGVMSLTVLAGPRPFHLVEHGKITATPRDQSGTVLDVVANGTGTATHLGAITVERTAVLTATSTPGVFDFNGEAT
Ga0068852_1002762723	3300005616	Corn Rhizosphere	MKRYLSKFGWSLMALALVGVISLKAFAAPRPFHLVEHGVITATPRDGSGTVLDVVASGVGTATHLGAITVER
Ga0068859_1009347113	3300005617	Switchgrass Rhizosphere	MKRYFSKFGTSLIALTLIGLISLTALAGARPFHLVEHGHLTVTPRAGSGGSVLDVVAQGAGTATHLGAIT
Ga0068859_1013521692	3300005617	Switchgrass Rhizosphere	MKHCLSKFGSNLIALSLIALMSLTTLAGPKPFHLVEHGQLNVTPRDASGSVLDVVAEGLGTATHLGVITVQRTATLTATSTPGV
Ga0068864_1027070922	3300005618	Switchgrass Rhizosphere	MKRFLFKNLLGLALIGVVSLTALAVPRPFHLVEHGQIAATPRDSSGTLLDVVASGGGTATHLGAIQVQRTATLTATATPGVFDFK
Ga0068863_1010249101	3300005841	Switchgrass Rhizosphere	MKRYLSKFGGSVLALALLVGMCLTVVATPHPLHLVEHGQISATPRDASGTVLDVVAHGTGTATHLGAITVERTATLTATDAPGIFDFEGDAILTSASGDQL
Ga0068863_1018581592	3300005841	Switchgrass Rhizosphere	MKRYFSKFGTSLIALTLIGLISLTALAGARPFHLVEHGRLTATPRAGSGGSVLDVVAQGSGTATHLGAITVDRTATLTATNTPGVFDFKGEATLTAATGE
Ga0068862_1010176501	3300005844	Switchgrass Rhizosphere	MKRYLSKFGGSVLALALLVGMCLTVVATPHPLHLVEHGQISATPRDASGTVLDVVAHGTGTATHLGAITVERTATLT
Ga0079220_102470883	3300006806	Agricultural Soil	MKRYLSWFGNSLLALALVGLISPTIFANPRPFHLVEFGQITATPRDASDTILDVVANGVGTATHLGA
Ga0075428_1023274551	3300006844	Populus Rhizosphere	MKRYLFKFGTHVMALALIGAISLTVLAAPRPFHLVEHGQITATPRDASGSVLDVVATGAGTATHLGAFTVERTATLTATSTPGIFDFKGEAILTAAT
Ga0105240_114831382	3300009093	Corn Rhizosphere	MKRYLSKFGSSVLALALLVGMCLTVIATPHPLHLVEHGQISATPRDASGTVLDVVAHGTGTATHLGAITVERTATLTATDAPGI
Ga0105240_122060531	3300009093	Corn Rhizosphere	MNRFLFKNLLGLALIGVISLTALAGPRPFHLVEHGLISATPRDASGTVLDVVASGGGTATHLGAITVQRTATLTATATPGVFDFKGE
Ga0105241_105465062	3300009174	Corn Rhizosphere	MKRFLSHFGTSSLMALALIGVLSLTAVGGVRPFHLVEHGTLSATPRDPSGTVLDVVANGTGTATHLGAITVQRIA
Ga0105241_116418261	3300009174	Corn Rhizosphere	MKRYFSKFGTSLIALTLIGLISLTALAGARPFHLVEHGHLTVTPRAGSGGSVLDVVAQGAGTATHLGAITVD
Ga0105241_126149771	3300009174	Corn Rhizosphere	MKRYLTKFGNNLKAFSLIAVMSLTVFAGPRPFHLVEHGQLQVTPRDRSGAILEVVANGTGTATHLGAITVQRTATLTATSTPGIFDFKGEATL
Ga0105248_108243491	3300009177	Switchgrass Rhizosphere	MKHYFFKNLLGLALIGVISLTALAGPRPFHLVEHGWITATPRDASGTVLDVVSNGTGTATHLGAISVERTATLTATSTPGVFAFNGQA
Ga0105248_109017833	3300009177	Switchgrass Rhizosphere	MKRFLSKFGTHLMALALMGAMSLSALGGPRPFHLVEHGQITATPRDGSGTVLDVVASGTGTATHLGAITVE
Ga0105249_122416811	3300009553	Switchgrass Rhizosphere	MKHYLSKFSSSLMALAVMGVISLTVLAGARPFHLVEHGQLTVTPRDQNGAVLDVVANGVGTATHLGAIT
Ga0105249_133467771	3300009553	Switchgrass Rhizosphere	MKRCLSKFGGSLMALAVIAAISLTVLAGSRPFHLVEHGNLTVTPRDASGTVLDVVAEGVGTATHLGVITVDRTATLTATSTPGIFDFNGQATLT
Ga0126305_108186351	3300010036	Serpentine Soil	MKSYFSKFGSALMALSLIGIMSLTVLAGSTRPFHLVGHGRLTVTPRDASGTVLDVVAEGVGTATHLGVITVERTATLTATSTAGIFDFNGAATLQLPL
Ga0126312_113803041	3300010041	Serpentine Soil	MKCYLPKFGGSLMALALIGVMSLTVLAGTRPFHLVEHGKLTVTPRDANGTVLDVVAEGVGTATHLGVITVDRTATLTATSTPGVFDFNGEATLTAATGEKLTS
Ga0126382_106856772	3300010047	Tropical Forest Soil	MKSYLLKFGTSLIGLALIGVMSLTTLASTRPFHLVEHGQLQVTPRDASGTVLDVIANGTGTATHLGAITVQRTATLTAT
Ga0126382_115351602	3300010047	Tropical Forest Soil	MKRYLSKFGTNLKALTLIGVMSLTVFAGPRPFHLVEHGWLTATPRDRSGTVLDVVANGTGTATHLGAITVERTAVLTATSTPG
Ga0126377_133959691	3300010362	Tropical Forest Soil	MKGYLPKFRSHLKALALIGLMSLTVLAGPRPFNLVEHGKLYVTPRDQSGTILDVVSEGAGTATHLGAITVQRTFTLTATATPGVFDFNGQATLTAASGEILNSTITGTFNANAGHADLVYEWTGG
Ga0105239_108206832	3300010375	Corn Rhizosphere	MSLTALAGPRPFHLVEHGNLTATPRDRSGSVLDVVAHGTGTATHLGAITVERTAVLTATGTPGVFDFNGEA
Ga0134124_109929352	3300010397	Terrestrial Soil	MKRYFSKFGTSLIALTLIGLISLTALAGARPFHLVEHGRLTATPRAGSGGSVLDVVAQGSGTATHLGGLTLDRTVNLTATNTPGE*
Ga0134124_126509752	3300010397	Terrestrial Soil	MKRYLSKFGTHLMALALIGAMFPTAFAAPRPFHLVEHGQISATPRDPSGTVLDVVASGSGTATHLGAITVERTATLTATAT
Ga0134124_130053011	3300010397	Terrestrial Soil	MKHFLFKNLLGLALIGVVSLTALAGPRPFHLVEHGWISATPRDASGTLLDVVASGGGTATHLGAIQVQRTATLTATSTPGVFDFKGE
Ga0134122_118808491	3300010400	Terrestrial Soil	MTVNGGFIIVLFRLGAQQTERTKLMKRYLSKFGTHLMALALIGLMSLTALAAPRPFHLVEHGLISATPRDATGTVLDVVASGSGTATHLGAITVERTATLTATATPGIFDFKGEAILTAATGEKLTTEI
Ga0134121_124808691	3300010401	Terrestrial Soil	MKHFLFKNLLGVVLIGVVSLTTLAGPRPFHLVEHGVISSSPRDASGAVLDVVASGGGTATHLGAITVQRTATLTATATPGVFDFKGEATLTA
Ga0105246_122175852	3300011119	Miscanthus Rhizosphere	MNRFLFKNLLGLALIGVVSLTSLAGPRPFHLVEHGQLTATPRDRSGSVLDVVASGVGTATHLGAIT
Ga0164298_105756442	3300012955	Soil	MKRYLSKCGGSLVTLALIGVMSLSALAGPRPFHIVEHGNITATPRDASGTVLDVVASGVGTATHLGVITVERTAT
Ga0157373_111438901	3300013100	Corn Rhizosphere	MKHFLFKNLLGLALIGVVSLTTLAGPRPFHLVEHGLISATPRDASGAVLDVVASGGGTATHLGAIT
Ga0157371_104605681	3300013102	Corn Rhizosphere	MKRYFSKFGTSLIALTLIGLISLTALAGARPFHLVEHGRLTATPRAGSGGSVLDVVAQGSGTATHLGAITVDR
Ga0157378_101969464	3300013297	Miscanthus Rhizosphere	MKHFLFKNLLGLALIGVVSLTALAGPRPFHLVEHGWISATPRDASGTLLDVVASGGGTATHLGAIQVQRTATLTATSTPGVFDFKGEATLTAATGELLTTT
Ga0157378_113279171	3300013297	Miscanthus Rhizosphere	MALALIGVMSLGVLAGPRPFHLVEHGNLTVTPRDQSGTVLDVVADGVGTAAHLGVITVERTATLTATPTP
Ga0163162_129733461	3300013306	Switchgrass Rhizosphere	MKRYLSKVGSSVLALSLLVGMCLTVSATSHPLHLVEHGQLSATPRDPSNTVLDVVAHGTGNATHLGAITVERTATLTATDTPGIFDFE
Ga0157372_123551662	3300013307	Corn Rhizosphere	MKRYLFKFGTHVMALALIGAISLTVLAAPRPFHLVEHGQITATPRDASGSVLDVVATGAGTATHLGAFTVERTATLTATSTPGIFDFKGE
Ga0157375_107805842	3300013308	Miscanthus Rhizosphere	MKRCLSKFGGSLMALALIGVMSLGVLAGPRPFHLVEHGNLTVTPRDQSGTVLDVVAEGVGTATHLGVITVDRTA
Ga0163163_114324661	3300014325	Switchgrass Rhizosphere	MKRYFSKFGSGLIALTLMGVMSLTALAGARPFHLVEHGRLTATPRDRSGTVLDVVAQGAGTATHLGAITVQRTATLTATD
Ga0157380_125990631	3300014326	Switchgrass Rhizosphere	MKHFLFKNLLGLALIGVVSLTALAGPRPFHLVEHGWISATPRDASGTLLDVVASGGGTATHLGAIQVQRTATLTATSTPGVFDFKGEATLTAA
Ga0157377_116159251	3300014745	Miscanthus Rhizosphere	MKRYLSKFGGSVLALALLVGMCLTVVATPHPLHLVEHGQLSATPRDPSNTVLDVVAHGTGNATHLGAITVERTATLTATDTPGIFDFEGDAILTSASGDQLFTEIH
Ga0157379_107612812	3300014968	Switchgrass Rhizosphere	MKSFLFKNLLGLALVCAVSLTTLAGPRPFHLVEHGWITATPRDASGAVLDVVSNGTGTATHLGAISVERTATLTATN
Ga0182007_101646341	3300015262	Rhizosphere	MASTIVARVRVTTERTISMKRYVSKFGNNLKALSLIAAMSLTVFAGPRPFHLVEHGQLQVTPRDASGTILDVVANGTGTATHLGAITVQRTATLT
Ga0132255_1055769111	3300015374	Arabidopsis Rhizosphere	MKRYLSKFSSKLLAIALIGLTSLTLLAGPRPFHLVEHGQVRVTPHDTTGNVLDLVADGLGTATHLGLISVHREATLTATSTPGIFDVN
Ga0190274_107314191	3300018476	Soil	MKCYLSKFGGSLMALALIGVLSLTVLAGARPFHLVEHGKLTVTPRDASGTVLDVVAEGVGTATHLGVITVDRTATLTATSTPGVFDFNGE
Ga0207647_100527893	3300025904	Corn Rhizosphere	MKRYLSKFGWSLMALALVGVISLKAFAAPRPFHLVEHGVITATPRDGSGTVLDVVASGVGTATHLGAITVERTATLTATNTPGIFAFKGDAILTAASGEKLTTEID
Ga0207643_111157911	3300025908	Miscanthus Rhizosphere	MKHFLFKNLLGLALIGVVSLTALAGPRPFHLVEHGWISATPRDASGAVLDVVASGGGTATHLGAITVQRTA
Ga0207654_102306583	3300025911	Corn Rhizosphere	MKRYLSKVGSSVLALSLLVGMCLTVSATSHPLHLVEHGQLSATPRDPSNTVLDVVAHGTGNATHLGAITVERTATLTATDTPGIFDFEGDAILTSASG
Ga0207671_115711331	3300025914	Corn Rhizosphere	MNRFLFKNLLGLALIGVISLTALAGPRPFHLVEHGLISATPRDASGTLLDVVASGGGTATHLGAITVQRTATLTATATPGVFDFKGEATLTAASGELLTTTI
Ga0207709_109697022	3300025935	Miscanthus Rhizosphere	MALALVGVISLKAFATPRPFHLVEHGVITATPRDGSGTVLDVVAEGSGTATHLGAITVQRTATLTATDTPG
Ga0207689_109581141	3300025942	Miscanthus Rhizosphere	MKHYFSKFGSSLMAVALIGVFSLTALAGTRPFHLVEHGWITATPRDASGAVLDVVASGGGTATHLGA
Ga0207640_100749095	3300025981	Corn Rhizosphere	MKRFLFKNLVGLVLIGVVSLTALAGPRPFHLVEHGWISATPRDASGTLLDVVASGGGTATHLGAIQVQRTATLTATSTPGVFDFKGEATLTAATGE
Ga0207703_106605482	3300026035	Switchgrass Rhizosphere	MKRCLSKFGGSLMALALIGVMSLGVLAGPRPFHLVEHGNLTVTPRDQSGTVLDVVAEGVGTATHLGVITVERTATLTATSTPGVFD
Ga0207639_121627821	3300026041	Corn Rhizosphere	MKRYLSHFGTSSLMALALIGVLSLTAVGGVRPFHLVEHGTLSATPRDPSGTVLDVVANGTGTATHLGAITVQRIATLTATGTPGIFDFEGDATLTSASGDQLTTEIHGTFNAN
Ga0207641_107302782	3300026088	Switchgrass Rhizosphere	MKRCLSKFGGSLMALALIGVMSLGVLAGPRPFHLVEHGNLTVTPRDQSGTVLDVVAEGVGTATHLGVITVERTATLTATSTPGVFDFNGQATLTAASGERRSSSSR
Ga0207641_114462111	3300026088	Switchgrass Rhizosphere	MKRYLSKVGSSVLALSLLVGMCLTVSATSHPLHLVEHGQLSATPRDPSNTVLDVVAHGTGNATHLGAITVERTSTLTATD
Ga0207676_118844981	3300026095	Switchgrass Rhizosphere	MKHFLFKNLLGLALIGVVSLTALAGPRPFHLVEHGWISATPRDASGAVLDVVASGGGTATHLGAITVQRTAT
Ga0207674_107506092	3300026116	Corn Rhizosphere	MKRILFIFGRNLMVLALTGVVSVLALASPRPMHLVEHGQITATPRDASGTVLDVVATGTGTATHLGAITVEHT
Ga0207698_100746814	3300026142	Corn Rhizosphere	MKRYLSKFGWSLMALALVGVISLKAFAAPRPFHLVEHGVITATPRDGSGTVLDVVASGIGTATHLGAITVERTATLTATATPGIFDFKGEAILTAATGEKLT
Ga0207698_123334801	3300026142	Corn Rhizosphere	MKSFLFKNLLGLALVCAVSLTTLAGPRPFHLVEHGWITATPRDASGAVLDVVSNGTGTATHLGAISVERTA
Ga0268265_116671791	3300028380	Switchgrass Rhizosphere	MKRYLFKFGTHVMALALIGAVSLTVLAAPRPFHLVEHGQITATPRDASGSVLDVVATGAGTATHLGAFTVERTATLTATSTPGIFDFKGEAILTAATGEKLTTEIDGT
Ga0268264_101003815	3300028381	Switchgrass Rhizosphere	MNRFLFKNLLGLALIGVISLTALAGPRPFHLVEHGLISATPRDASGTLLDVVASGGGTA
Ga0307408_1000189435	3300031548	Rhizosphere	MKHYLSKFGSSLMALAVMGVISLTVLAGARPFHLVEHGQLTVTPRDQSGAVLDVVASGVGTATHLGGITVQRTAVLTA
Ga0310813_117642971	3300031716	Soil	MKHYLSRFGTTIALVVAISLTALAGARPFHLVEHGQLQVNPRDASGTVLDVYAEGVGTATHLGAITVERTATLTATSTPGVFDFNGEAVLTAASGEKLNTTITGTFNAAIGHADLI
Ga0307469_115170112	3300031720	Hardwood Forest Soil	MKRYLSKFGSSLVALALLGVMSLTTLAGPRPFHLVEHGNLTVTPRDASGNVLDVVAVGLGTATHLGTITVQRTATLTATSTPGIFDFKGEATL
Ga0307406_100213823	3300031901	Rhizosphere	MKHYLSKFGSSLMALAVMGVISLTVLAGARPFHLVEHGQLTVTPRDQSGAVLDVVASGVGTATHLGGITVQRTAVLTATSTPGIFDFNGEATLTAATGEKLTSTITG
Ga0310906_113547271	3300032013	Soil	MKHFLFKNLLGLALIGVVSLTAFAGPRPFHLVEHGLISATPRDASGAVLDVVASGGGTATHLGAITVQRTATLTATATPGVFDF
Ga0310890_111344321	3300032075	Soil	MKHFLFKNLLGVALIGVVSLTALAGPRPFHLVEHGLISATPRDASGTLLDVVASGGGTATHLGAITVQRTATLTATST
Ga0310810_108903543	3300033412	Soil	MKHFLFKNLMGLALIGVVSLTALAGPRPFHLVEHGLISATPRDASGAVLDVVASGGG
Ga0310810_114977762	3300033412	Soil	MKRYLSKFGTHLMALALIGAMFLTAFAAPRPFHLVEHGQISATPRDPSGTVLDVVASGSGTATH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096858

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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