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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F096853 |
| Family Type | Metagenome |
| Number of Sequences | 104 |
| Average Sequence Length | 60 residues |
| Representative Sequence | MFSIGQIFEGMIGGILRSAKVIAIVDGGRIGWLEFLDTKSPPFELDMAKNSVWKLVQRE |
| Number of Associated Samples | 83 |
| Number of Associated Scaffolds | 104 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 46.15 % |
| % of genes near scaffold ends (potentially truncated) | 32.69 % |
| % of genes from short scaffolds (< 2000 bps) | 89.42 % |
| Associated GOLD sequencing projects | 72 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.75 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (73.077 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (14.423 % of family members) |
| Environment Ontology (ENVO) | Unclassified (54.808 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (62.500 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.34% β-sheet: 35.63% Coil/Unstructured: 54.02% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.75 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| b.34.9.3: MBT repeat | d1oz2a1 | 1oz2 | 0.7211 |
| b.34.9.0: automated matches | d2r58a2 | 2r58 | 0.70643 |
| b.34.9.3: MBT repeat | d1wjra1 | 1wjr | 0.70051 |
| b.34.9.3: MBT repeat | d1oz2a2 | 1oz2 | 0.68814 |
| d.310.1.1: VC0467-like | d2ew0a1 | 2ew0 | 0.67439 |
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| Pfam ID | Name | % Frequency in 104 Family Scaffolds |
|---|---|---|
| PF00313 | CSD | 9.62 |
| PF11752 | DUF3309 | 4.81 |
| PF06210 | DUF1003 | 2.88 |
| PF13439 | Glyco_transf_4 | 1.92 |
| PF13581 | HATPase_c_2 | 1.92 |
| PF00072 | Response_reg | 0.96 |
| PF11776 | RcnB | 0.96 |
| PF10431 | ClpB_D2-small | 0.96 |
| PF01261 | AP_endonuc_2 | 0.96 |
| PF16998 | 17kDa_Anti_2 | 0.96 |
| PF12833 | HTH_18 | 0.96 |
| PF13649 | Methyltransf_25 | 0.96 |
| COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
|---|---|---|---|
| COG4420 | Uncharacterized membrane protein | Function unknown [S] | 2.88 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 73.08 % |
| All Organisms | root | All Organisms | 26.92 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 14.42% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 13.46% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 5.77% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.77% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 5.77% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.81% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.85% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 3.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.85% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.88% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 2.88% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.92% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.92% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.92% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.96% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.96% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.96% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.96% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.96% |
| Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.96% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.96% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001305 | Grasslands soil microbial communities from Hopland, California, USA | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005529 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1 | Environmental | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
| 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
| 3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
| 3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
| 3300021445 | Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG | Environmental | Open in IMG/M |
| 3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
| 3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
| 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028779 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2 | Environmental | Open in IMG/M |
| 3300029913 | III_Bog_N3 coassembly | Environmental | Open in IMG/M |
| 3300030688 | II_Bog_N2 coassembly | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Host-Associated | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300033475 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| C688J14111_101930273 | 3300001305 | Soil | MFSMGQKFEGMVGGIRRSAKVIAIVDGGHIGWLEFLDAKGPPFELLRADGPVWKVVPPRPRAGS* |
| Ga0062593_1021080432 | 3300004114 | Soil | MFSIGQIFEGMIGGILRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMANRSVWKLVQRER |
| Ga0063455_1013641861 | 3300004153 | Soil | QKFQGMVGGIRRSAKVIAIVDGGHIGWLEFLDAKGPPFELLRADGPVWRVVPPRPRAGS* |
| Ga0062595_1013756993 | 3300004479 | Soil | MMFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDVTKNNVWKLVSRER* |
| Ga0070690_1011990851 | 3300005330 | Switchgrass Rhizosphere | MFSIGQIFEGMIGGILRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMANRSVWK |
| Ga0070670_1005630071 | 3300005331 | Switchgrass Rhizosphere | MFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKRSVWKLVQHER |
| Ga0068869_1019743371 | 3300005334 | Miscanthus Rhizosphere | MFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKRSVWK |
| Ga0070666_104618901 | 3300005335 | Switchgrass Rhizosphere | MFLIGQVFEGVVGGRVRPAKVIAIVDGGRIGWLEFLDVKSPPFELDMA |
| Ga0070682_1009895331 | 3300005337 | Corn Rhizosphere | AVGGIRRSAKVIAIVDGGHIGWLEFLDAKAPPFELLRSDGPVWKLVPPERGVHS* |
| Ga0068868_1006380053 | 3300005338 | Miscanthus Rhizosphere | MMFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDVTKNSVWKLVSRER* |
| Ga0070661_1010176931 | 3300005344 | Corn Rhizosphere | MFSIGQIFEGMIGGILRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMANRAVWKLVQRER |
| Ga0070668_1008818153 | 3300005347 | Switchgrass Rhizosphere | VIGGTLRPAKVIAIVDGGRIGWLEFLDIKGPPFELTGANISAWKLVRHDR* |
| Ga0070671_1001056745 | 3300005355 | Switchgrass Rhizosphere | MMFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDVTKNSVWKLVSR |
| Ga0070667_1005056084 | 3300005367 | Switchgrass Rhizosphere | MFSIGQIFEGLVGGRIRSAKVIAIVDSGRIGWLEFLDIKSPPFELDMAKNPLWKLVQRER |
| Ga0070711_1001270351 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MMFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDMTKNSVWKLVSRE |
| Ga0070711_1008264381 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MFSMGQIFEGVVDGTRRSAKVIALVDGGHIGWLKFLDAKAPPFELLKADGPIWKLVPPERWDR* |
| Ga0070685_104116401 | 3300005466 | Switchgrass Rhizosphere | ALMFSRGQIFEGMVGGLRRSAKVIAIVDGGRIGWLEFVDTKGPPFELDMAKNSAWTLVQRER* |
| Ga0070741_103660522 | 3300005529 | Surface Soil | MFSMGQKFEGVVGGIRRSAKVIAIVDGGHIGWLEFLDAKAPPFELLRADGPVWKLVPPGPSVRP* |
| Ga0070679_1011634063 | 3300005530 | Corn Rhizosphere | MFSMGQIFEGMVGGIRRSAKVIAIVDGGHIGWLEFLDAKAPPFELLRSDGPVWKLVPPERSVHS* |
| Ga0068855_1024660391 | 3300005563 | Corn Rhizosphere | MIGGILRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMANRSVWKLVQRER* |
| Ga0070762_105283621 | 3300005602 | Soil | MFSRGQIFEGVIGGTRRSAKVIAIVDGGRIGWLEFLDTRAPPFELNRADGAIWKLVEHG* |
| Ga0068859_1015414532 | 3300005617 | Switchgrass Rhizosphere | MFSRGQIFEGMVGGLRRSAKVIAIVDGGRIGWLEFVDTKGPPFELDMAKNSAWTLVQRER |
| Ga0068859_1031693311 | 3300005617 | Switchgrass Rhizosphere | RRTQGEVLMFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKRSVWKLVQHER* |
| Ga0068863_1027156602 | 3300005841 | Switchgrass Rhizosphere | MYSRGQIFESMAGGLTRSAKVIAIVDGGRIGWLEFLDTKGPPFELDVAKKTVWTLVRR* |
| Ga0066696_101866655 | 3300006032 | Soil | MFSRGQIFEGLVGGVRRSAKVIAIVNAGQIGWLEFLDAKAPPFELLRADGPVWKLVSRAR |
| Ga0066652_1007375303 | 3300006046 | Soil | MYSRGQIFESVAGGLRRSAKVIAIVDGGRIGWLEFQDTKSPPFELDVAKKTVWTLVRR* |
| Ga0079220_111247022 | 3300006806 | Agricultural Soil | MFSMGQKFEGVVGGIRRSAKVIAIVDGGHIGWLEFLDAKAPPFELLRADGPVWKLVPPGPSVRS* |
| Ga0068865_1015512241 | 3300006881 | Miscanthus Rhizosphere | RAVLMFSRGQIFEGVVGGIRRSAKVIAIVDGGHVGWLEFLDVKAPPFELVRADGPVWKLVPRER* |
| Ga0105240_116671602 | 3300009093 | Corn Rhizosphere | MFSRGQISEGAVGGIRRSAKVIAIVDGGHIGWLEFLDAKAPPFELLRSDGPVWKLVPPERGVHS* |
| Ga0105240_127069852 | 3300009093 | Corn Rhizosphere | MFSIEQIFEGMIGGILRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMANRSVWKLVQRER |
| Ga0105247_101403386 | 3300009101 | Switchgrass Rhizosphere | MFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKRSVWKLVQHE |
| Ga0105247_105524031 | 3300009101 | Switchgrass Rhizosphere | MFSRGQIFEGMVCGLRRSAKVIAIVDGGRIGWLEFVDTKGPPFELDMAKNSAWTLVQRER |
| Ga0105241_100336343 | 3300009174 | Corn Rhizosphere | MFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDVTKNSVWKLVSRER |
| Ga0105241_116069662 | 3300009174 | Corn Rhizosphere | MFSRGQIFEGAVGGIRRSAKVIAIVDGGHIGWLEFLDAKAPPFELLRSDGPVWKLVPPERGVHS* |
| Ga0105238_101743615 | 3300009551 | Corn Rhizosphere | MFSIGQTFEGMIGDVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKRSVWKLVQHER |
| Ga0105238_126528952 | 3300009551 | Corn Rhizosphere | MFSRGQIFEGMVGGLRRSAKVIAIVDGGRIGWLEFVDTKGPPFELDMAKNPAWTLVQRER |
| Ga0134121_101072251 | 3300010401 | Terrestrial Soil | RREVMMFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDVTKNSVWKLVSRER* |
| Ga0150984_1037662862 | 3300012469 | Avena Fatua Rhizosphere | MFSMGQKFEGMVGGIRRSAKVIAIVDGGHIGWLEFLDAKGPPFELLRADGPVWKLVPPRPRAGS* |
| Ga0137404_114177202 | 3300012929 | Vadose Zone Soil | MFSRGQIFEGMVGGLRRSAKVIAIVDGGRIGWLEFVDTKGPPFELDMTKNSAWTLVQRER |
| Ga0164308_118759722 | 3300012985 | Soil | MFSRGQIFEGVVGGIRRSAKVIAIVDGGQVGWLEFLDAKAPPFELVRADGPVWKLVSRKQ |
| Ga0157378_109890263 | 3300013297 | Miscanthus Rhizosphere | ARREILMFSRGQIFECVIGGALRSAKVIAIVDGGRIGWLEFLDVKGPLFELDMAKKSVWKLVQGAR* |
| Ga0157375_132039032 | 3300013308 | Miscanthus Rhizosphere | MYARGQIFEGVAGGLRRSAKVIAIVDGGRIGWLEFLDTKGPPFELDVAKSSVWTLVRRER |
| Ga0182024_1000179225 | 3300014501 | Permafrost | MFSRGQIFEGVMGGIRRSAKVIAIVDGGRIGWLEYLDTKAPPFELNIADGTTWKLVKHG* |
| Ga0157379_1000160022 | 3300014968 | Switchgrass Rhizosphere | MFSRGQIFEGMVGGLRRSAKVIAIVDGGRIGWLEFMDTKGPPFELDVAKNSAWTLVRRER |
| Ga0157376_117199153 | 3300014969 | Miscanthus Rhizosphere | MFSRGQIFEGMVGGLRRSAKVIAIVDGGRIGWLEFVDTKGPPFDLDMAKNSAWTLVQREG |
| Ga0157376_121859033 | 3300014969 | Miscanthus Rhizosphere | RCAGRGGLMFSIGQIFEGLVGGRIRSAKVIAIVDSGRIGWLEFLDIKSPPFELDMAKNPVWKLVQRER* |
| Ga0210407_106998922 | 3300020579 | Soil | MFSRGQIFEGVIGGIPRSAKVIAIVDGGRIGWLEFRDTKGPPFELDVTKTSVWKLVQVER |
| Ga0210401_102061191 | 3300020583 | Soil | MFSRGQIFEGLIGGTRRSAKVIAIVDGGRVGWLEFLDTKAPLFELDRADGPIWRLVEHGQ |
| Ga0210406_101453044 | 3300021168 | Soil | MFSIGQIFEGVIGGIPRSAKVIAIVDGGRKGWLEFRDTKGPPFELDVTRASVWKLVQGER |
| Ga0210408_101927355 | 3300021178 | Soil | MFSRGQIFESVIGGIPRSAKVIAIVDGGRIGWLEFRDTKGPPFELDVTKTSVWKLVQVKR |
| Ga0210396_100293654 | 3300021180 | Soil | MFSRGQIFEGLVGGIRRSAKVIAIVDGGRVGWLELLDTKAPLFELDRADGPIWRLVEHGQ |
| Ga0210388_107736762 | 3300021181 | Soil | MFSRGQVFEGLTGGIRRSAKVIAIVDGGRIGWLEHLDTKAPLSELNSTDGPIWKLVQHG |
| Ga0210389_102791653 | 3300021404 | Soil | MFSRGQIFEGVIGGIRRSAKVIAIVDGGRIGWLELLDAKAPLFELNRADGPIWKLVPHG |
| Ga0210389_106605782 | 3300021404 | Soil | MFSIGQIFEGVIGGIPRSAKVIAIVDGGRIGWLEFRDTKGPPFELDVTRASVWKLVQGVR |
| Ga0210387_104474023 | 3300021405 | Soil | MFSRGQIFEGVIGGIRRSAKVIAIVDGGRIGWLEFLDTRAPPFELNRADGTIWKLVEHG |
| Ga0210384_108893213 | 3300021432 | Soil | MFSRGQIFESVIGGIPRSAKVIAIVDGGRIGWLEFRDTKGPPFELDVTKTSVWKLVQVER |
| Ga0210391_101458291 | 3300021433 | Soil | MFSRGQIFEGVIGGTRRSAKVIAIVDGGRIGWLEFLDTRAPPFELNRADGAIWKLVEHG |
| Ga0210391_107224901 | 3300021433 | Soil | RGQIFEGLIGGIRRSAKVIAIVDGGRVGWLEFLDTKAPLFELDRADGPIWRLVEHGQ |
| Ga0182009_100431871 | 3300021445 | Soil | CSFRRKVLMFSRGLTFECIIGEILRSAKVIAIVDGGRIGWLAYLDAKGPPFELDTADRSAWKLVQCGR |
| Ga0210392_112784902 | 3300021475 | Soil | WRRARREVLMFSIGQIFEGVIGGIPRSAKVIAIVDGGRKGWLEFRDTKGPPFELDVTRASVWKLVQGER |
| Ga0210398_108254241 | 3300021477 | Soil | MFSRGQIFEGVIGGIRRSAKVIAIVDGGRIGWLEFLDTRSPPFELNRADGTIWKLVEHG |
| Ga0207710_102979194 | 3300025900 | Switchgrass Rhizosphere | MFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDVKGPLFELDMAKKSVWKLVQG |
| Ga0207710_103305213 | 3300025900 | Switchgrass Rhizosphere | MFSIGQIFEGLVGGRIRSAKVIAIVDSGRIGWLEFLDIKSPPFELDMAKNPVWKLVQRER |
| Ga0207654_112062511 | 3300025911 | Corn Rhizosphere | MFSRGQIFEGAVGGIRRSAKVIAIVDGGHIGWLEFLDAKAPPFELLRSDGPVWKLVPPERGVHS |
| Ga0207695_101980963 | 3300025913 | Corn Rhizosphere | MFSMGQIFEGVVDGTRRSAKVIALVDGGHIGWLKFLDAKAPPFELLKADGPIWKLVPPERWDR |
| Ga0207695_106045512 | 3300025913 | Corn Rhizosphere | MFLIGQVFEGVVGGRVRPAKVIAIVDGGRIGWLEFLDVKSPPFELDMAKKPVWKLVQREQ |
| Ga0207695_110665413 | 3300025913 | Corn Rhizosphere | MFSRGLTFECIIGEILRSAKVIAIVDGGRIGWLAYLDAKGPPFELDTADRSAWKLVQCGR |
| Ga0207695_114784803 | 3300025913 | Corn Rhizosphere | MFSRGQISEGAVGGIRRSAKVIAIVDGGHIGWLEFLDAKAPPFELLRSDGPVWKLVPPERGVHS |
| Ga0207671_103955363 | 3300025914 | Corn Rhizosphere | MFSRGQTFECIIGGILRSAKVIAIVDGGRIGWLAYLDAKGPPFELDTADRSAWKLVQCGR |
| Ga0207693_103004352 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | QIFEGVIGGTLRSAKVIAIVDGGRIGWLEYRDTKGPPFELDVAKSSVWKLVQGATIASNTART |
| Ga0207693_107478521 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MMFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDVTKNNVWKLVSRE |
| Ga0207657_110040613 | 3300025919 | Corn Rhizosphere | SARREILMFSRGQIFECVIGGALRSAKVIAIVDGGRIGWLEFLDVKGPLFELDMAKKSVWKLVQGAR |
| Ga0207649_108936831 | 3300025920 | Corn Rhizosphere | RREILMFSRGQIFECVIGGALRSAKVIAIVDGGRIGWLEFLDVKGPLFELDMAKKSVWKLVQGAR |
| Ga0207694_103071034 | 3300025924 | Corn Rhizosphere | MFSRGQIFEGTIGGVLRCAKVIAIVDGGRIGWLAYLHAKGPPFELDAADRSAWKLVQCER |
| Ga0207694_106914754 | 3300025924 | Corn Rhizosphere | GEVLMFSIGQTFEGMIGGVPQSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKRSVWKLVQHER |
| Ga0207694_116339712 | 3300025924 | Corn Rhizosphere | IFEGVVGGLRRSAKVIAIVDGGRIGWLEFVDTKGPPFELDMAKNPAWTLVQRER |
| Ga0207701_106955342 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MFSIGQVFEGVIGGTLRPAKVIAIVDGGRIGWLEFLDIKGPPFELTGANISAWKLVRHDR |
| Ga0207686_114177942 | 3300025934 | Miscanthus Rhizosphere | MFSRGQIFEGVVGGIRRSAKVIAIVDGGHVGWLEFLDVKAPPFELVRADGPVWKLVPRER |
| Ga0207686_116920863 | 3300025934 | Miscanthus Rhizosphere | MFSIGQVFEGVVGGRVRPAKVIAIVDGGRIGWLEFLDIKSPPFELDMAKKPAWKLVQREQ |
| Ga0207689_101334903 | 3300025942 | Miscanthus Rhizosphere | MFSIGQVFEGVVGGRVRPAKVIAIVDGGRIGWLEFLDVKSPPFELDMAKKPVWKLVQREQ |
| Ga0207689_116469153 | 3300025942 | Miscanthus Rhizosphere | MFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKRSVWKLVQH |
| Ga0207679_113621103 | 3300025945 | Corn Rhizosphere | MFSRGQIFECVIGGALRSAKVIAIVDGGRIGWLAYLDAKGPPFELDTADRSAWKLVQ |
| Ga0207679_118721813 | 3300025945 | Corn Rhizosphere | MFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDVKGPLFELDMAKKSVWKLVQGAR |
| Ga0207667_119601451 | 3300025949 | Corn Rhizosphere | GRGGLMFSIGQIFEGLVGGRIRSAKVIAIVDSGRIGWLEFLDIKSPPFELDMAKNPVWKLVQRER |
| Ga0207658_115885593 | 3300025986 | Switchgrass Rhizosphere | MFSRGQIFEGMVGGLRRSAKVIAIVDGGRIGWLEFVDTKGPPFELDMAKNSAWTLVQREG |
| Ga0207677_104674381 | 3300026023 | Miscanthus Rhizosphere | LMFSRGQIFECVIGGALRSAKVIAIVDGGRIGWLEFLDVKGPLFELDMAKKSVWKLVQGA |
| Ga0207678_115847181 | 3300026067 | Corn Rhizosphere | MFSRGQIFEGVVGGIRRSAKVIAIVDGGHVGWLEFLDVKAPPFELVRADGPVWKLVP |
| Ga0207702_113597252 | 3300026078 | Corn Rhizosphere | MFSMGQIFEGVVDGTRRSAKVIAIVNGGHIGWLKFLDAKAPPFELLQADGPIWKLVPPERWDR |
| Ga0207641_117750873 | 3300026088 | Switchgrass Rhizosphere | EGMIGGVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKRSVWKLVQHER |
| Ga0207674_109696402 | 3300026116 | Corn Rhizosphere | MFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMANRSVWKLVQRER |
| Ga0207683_1001660915 | 3300026121 | Miscanthus Rhizosphere | MFSIGQIFEGMIGGILRSAKVIAIVDGGRIGWLEFLDTKSPPFELDMAKNSVWKLVQRE |
| Ga0209167_104683171 | 3300027867 | Surface Soil | MFSRGQIFEGLIGGIRRSAKVIAIVDGGRVGWLEFLDTKAPIFELDRADGPIWRLVEHGQ |
| Ga0302266_103607602 | 3300028779 | Bog | MFSRGQIFEGLIGGIRRSAKVIAIVDGGRIGWLELLDIKAPPFELNSTSGPIWKLVRHG |
| Ga0311362_103090564 | 3300029913 | Bog | MMFLRGQIFEGAIGGICRSAKVIAIVDGGRIGWLEFLDIKAPPFELNSADGPIWKLVQHG |
| Ga0311345_105330374 | 3300030688 | Bog | GAIGGICRSAKVIAIVDGGRIGWLEFLDIKAPPFELNSADGPIWKLVQHG |
| Ga0310686_1052073741 | 3300031708 | Soil | MFSRGQVFEGLIGGIRRSAKVIAIVDGGRIGWLEHLDTKAPPFELNSTDGPIWKLVQHG |
| Ga0265314_102118743 | 3300031711 | Rhizosphere | MFSIGQIFEGVIGGIPRSAKVIAIVDGGRIGWLAYRDTKGPPFELDVAKASVWKLVPGTH |
| Ga0307476_100923642 | 3300031715 | Hardwood Forest Soil | MKDVMFSREQIFEGVIGGIHLSAKVIAIVDGGRAGWLEFLDTKAPLFELDRADGPIWRLVEHGQ |
| Ga0307476_105092872 | 3300031715 | Hardwood Forest Soil | MFSRGQIFEGLIGGIRRSAKVIAIVDGGRVGWLEFLDTKAPPFELNRADGPIWKLVQHG |
| Ga0310813_105053164 | 3300031716 | Soil | MMFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDVTKNSVWKLV |
| Ga0307469_104157231 | 3300031720 | Hardwood Forest Soil | MMFSIGQIFEGVIGGIPRSAKVIAIVDYGRIGWLEFRDTKGPPFELDVAKNSVWKLVSRE |
| Ga0310892_110987952 | 3300031858 | Soil | MFSRGQVFEGVVGGLCRSARVIAIVDGGRIGWLEFLDTKSPPFELDMAKNSVWKLVQRE |
| Ga0310811_100958725 | 3300033475 | Soil | MFSRGQIFEGTIGGVLRCAKVIAIVDGGRIGWLAYLDAKGPPFELDAADRSAWKLVQCER |
| Ga0310811_104837421 | 3300033475 | Soil | TQGEVLMFSIGQTFEGMIGGVPRSAKVIAIVDGGRIGWLEFLDTRGPPFELDMAKISVWKLVQHER |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |