Metagenome Family F096830

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096830
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	100 residues
Representative Sequence	MTAQAPILLFGSYGELDVFASVTEAERAIDPWSLSDGQLAAADASGRVLRVLSVGASVRLTDTGATEPEQIRARLAERLREDGNLERLVERAIERYGYRR
Number of Associated Samples	71
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.73 %
% of genes near scaffold ends (potentially truncated)	47.12 %
% of genes from short scaffolds (< 2000 bps)	93.27 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.192 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (41.346 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.03% β-sheet: 26.56% Coil/Unstructured: 41.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF08241	Methyltransf_11	8.65
PF12697	Abhydrolase_6	4.81
PF01243	Putative_PNPOx	4.81
PF12802	MarR_2	3.85
PF13193	AMP-binding_C	3.85
PF04851	ResIII	2.88
PF00990	GGDEF	1.92
PF03466	LysR_substrate	1.92
PF13649	Methyltransf_25	1.92
PF00561	Abhydrolase_1	1.92
PF01548	DEDD_Tnp_IS110	0.96
PF00496	SBP_bac_5	0.96
PF00440	TetR_N	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.00 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.00 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	25.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	25.96 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	16.35 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.92 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	10.58 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5.77 %
Allostreptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Allostreptomyces	0.96 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	10.58 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.96 %
unclassified Patulibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → unclassified Patulibacter	0.96 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.96 %
Allostreptomyces psammosilenae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Allostreptomyces → Allostreptomyces psammosilenae	0.96 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	10.58 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.96 %
Patulibacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → unclassified Patulibacter → Patulibacter sp.	0.96 %
Streptomyces sp. PT12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PT12	0.96 %
Allostreptomyces psammosilenae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Allostreptomyces → Allostreptomyces psammosilenae	0.96 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_115013912	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300004463\|Ga0063356_100957888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1216	Open in IMG/M
3300005093\|Ga0062594_102711711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	549	Open in IMG/M
3300005327\|Ga0070658_10392674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1191	Open in IMG/M
3300005328\|Ga0070676_10481730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300005337\|Ga0070682_101418080	Not Available	594	Open in IMG/M
3300005339\|Ga0070660_100293149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300005347\|Ga0070668_100538299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300005354\|Ga0070675_100855793	Not Available	832	Open in IMG/M
3300005459\|Ga0068867_100711523	Not Available	887	Open in IMG/M
3300005544\|Ga0070686_100852800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	738	Open in IMG/M
3300005546\|Ga0070696_100914780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300005549\|Ga0070704_100920517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	787	Open in IMG/M
3300005615\|Ga0070702_100412836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	969	Open in IMG/M
3300005615\|Ga0070702_101080214	Not Available	640	Open in IMG/M
3300005719\|Ga0068861_100945491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	819	Open in IMG/M
3300006844\|Ga0075428_100895877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
3300006881\|Ga0068865_100518846	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300006881\|Ga0068865_100660894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300009098\|Ga0105245_11284874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	781	Open in IMG/M
3300009100\|Ga0075418_12631414	Not Available	549	Open in IMG/M
3300009156\|Ga0111538_10457004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PT12	1619	Open in IMG/M
3300009789\|Ga0126307_10093561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2378	Open in IMG/M
3300009789\|Ga0126307_10126804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2036	Open in IMG/M
3300009789\|Ga0126307_10809414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Allostreptomyces → Allostreptomyces psammosilenae	756	Open in IMG/M
3300009789\|Ga0126307_11410942	Not Available	564	Open in IMG/M
3300009840\|Ga0126313_10001873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	11421	Open in IMG/M
3300009840\|Ga0126313_10898005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300009840\|Ga0126313_11395412	Not Available	580	Open in IMG/M
3300010036\|Ga0126305_10771294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	653	Open in IMG/M
3300010038\|Ga0126315_10955027	Not Available	572	Open in IMG/M
3300010039\|Ga0126309_10721751	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300010040\|Ga0126308_10081199	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300010040\|Ga0126308_11128545	Not Available	553	Open in IMG/M
3300010042\|Ga0126314_10256288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → unclassified Patulibacter → Patulibacter sp.	1242	Open in IMG/M
3300010042\|Ga0126314_10777940	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010044\|Ga0126310_10369675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1011	Open in IMG/M
3300010045\|Ga0126311_11039942	Not Available	671	Open in IMG/M
3300010045\|Ga0126311_11255925	Not Available	614	Open in IMG/M
3300010166\|Ga0126306_11847065	Not Available	506	Open in IMG/M
3300010399\|Ga0134127_12764590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	570	Open in IMG/M
3300011119\|Ga0105246_10806186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	833	Open in IMG/M
3300017965\|Ga0190266_10195407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300017965\|Ga0190266_10337104	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300017965\|Ga0190266_11065878	Not Available	547	Open in IMG/M
3300018422\|Ga0190265_10040810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3956	Open in IMG/M
3300018422\|Ga0190265_10488868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1342	Open in IMG/M
3300018422\|Ga0190265_10929947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	992	Open in IMG/M
3300018422\|Ga0190265_11206752	Not Available	875	Open in IMG/M
3300018422\|Ga0190265_11237622	Not Available	864	Open in IMG/M
3300018432\|Ga0190275_11696000	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300018466\|Ga0190268_10572102	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300018466\|Ga0190268_11567500	Not Available	578	Open in IMG/M
3300018469\|Ga0190270_10182649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1749	Open in IMG/M
3300018469\|Ga0190270_10684041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300018469\|Ga0190270_10770862	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300018469\|Ga0190270_10869735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300018469\|Ga0190270_11138246	Not Available	815	Open in IMG/M
3300018476\|Ga0190274_10361574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300018476\|Ga0190274_10708965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1052	Open in IMG/M
3300018476\|Ga0190274_11401914	Not Available	788	Open in IMG/M
3300018481\|Ga0190271_10919768	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300019377\|Ga0190264_10313994	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300019767\|Ga0190267_10465008	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300021976\|Ga0193742_1006996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6186	Open in IMG/M
3300025901\|Ga0207688_10991612	Not Available	531	Open in IMG/M
3300025907\|Ga0207645_10143576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1556	Open in IMG/M
3300025907\|Ga0207645_10319062	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300025908\|Ga0207643_10491083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300025919\|Ga0207657_10387525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1100	Open in IMG/M
3300025932\|Ga0207690_10322155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1215	Open in IMG/M
3300025935\|Ga0207709_10775617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300025937\|Ga0207669_10526700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	950	Open in IMG/M
3300025938\|Ga0207704_11557200	Not Available	567	Open in IMG/M
3300025938\|Ga0207704_11788662	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300025942\|Ga0207689_10437331	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300025945\|Ga0207679_11975617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	531	Open in IMG/M
3300025961\|Ga0207712_11572672	Not Available	589	Open in IMG/M
3300026035\|Ga0207703_11701796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	607	Open in IMG/M
3300026075\|Ga0207708_10781100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300026088\|Ga0207641_11495339	Not Available	677	Open in IMG/M
3300026089\|Ga0207648_10445312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1179	Open in IMG/M
3300028596\|Ga0247821_10954098	Not Available	573	Open in IMG/M
3300028876\|Ga0307286_10224137	Not Available	685	Open in IMG/M
3300028878\|Ga0307278_10012957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3886	Open in IMG/M
3300030336\|Ga0247826_10318008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1122	Open in IMG/M
3300030336\|Ga0247826_10457669	Not Available	955	Open in IMG/M
3300031450\|Ga0272433_10004962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	17205	Open in IMG/M
3300031731\|Ga0307405_10455740	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300031731\|Ga0307405_11116778	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300031824\|Ga0307413_11800217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300031824\|Ga0307413_11908566	Not Available	534	Open in IMG/M
3300031852\|Ga0307410_10415896	Not Available	1090	Open in IMG/M
3300031852\|Ga0307410_10573634	Not Available	938	Open in IMG/M
3300031903\|Ga0307407_10636076	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300031995\|Ga0307409_100628405	Not Available	1065	Open in IMG/M
3300031995\|Ga0307409_101263528	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300032002\|Ga0307416_100474350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1310	Open in IMG/M
3300032002\|Ga0307416_102167265	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300032004\|Ga0307414_11874099	Not Available	560	Open in IMG/M
3300032080\|Ga0326721_10131798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1243	Open in IMG/M
3300032080\|Ga0326721_10646335	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300032080\|Ga0326721_10679508	Not Available	634	Open in IMG/M
3300033551\|Ga0247830_10957066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	683	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.65%
Host-Associated	Host-Associated	41.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.65%
Plants	Host-Associated → Plants	41.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.50%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	6.73%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	17.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	11.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021976	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1150139122	3300000956	Soil	CAGSPTKVRMAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADASGQIYRVLEVGRSIRLTETGTTEPEVVRARLAEKLREEGELDTLIERAIARFGYRR*
Ga0063356_1009578883	3300004463	Arabidopsis Thaliana Rhizosphere	MAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADASGQIYRVLEVGRSIRLTETGTTEPEVVRARLAEKLREEGELDTLIERAIARFGYRR*
Ga0062594_1027117111	3300005093	Soil	MTTQAPILLFGSYGELDVYASVSDAERAIDPWTLADGQLAAADASGRVLRVLPIGRSICLTDTGACDPDTVRARLAERLREEGDLGRLVERAVERFGYRR*
Ga0070658_103926742	3300005327	Corn Rhizosphere	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR*
Ga0070676_104817301	3300005328	Miscanthus Rhizosphere	APILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR*
Ga0070682_1014180802	3300005337	Corn Rhizosphere	VDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR*
Ga0070660_1002931493	3300005339	Corn Rhizosphere	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEEGELDRLVERAVERYGFRH*
Ga0070668_1005382992	3300005347	Switchgrass Rhizosphere	MAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADASGQIYRVLEVGRSIRLTETGTTEPEVVRARLAEKLREEGELDALVERAIARFGYRR*
Ga0070675_1008557931	3300005354	Miscanthus Rhizosphere	MAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLSCADASGQIYRVLEVGRSIRLTDTGTTEPEVVRARLAEKLREEGELDALVERAIARFGYRR*
Ga0068867_1007115232	3300005459	Miscanthus Rhizosphere	MTTQAPILLFGSYGELDVYASLTDAERAIDPWTLSDGQLSAADASGRVLRVLGVGRSICLTDTGASDPDTVRAKLSERLREDGDLGRLIERAVERFGYRR*
Ga0070686_1008528002	3300005544	Switchgrass Rhizosphere	LRRVPYKSAMAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADALGQIYRVLEVGRSIRLTETGTTEPEVVRARLAEKLREEGELDALVERAIARFGYRR*
Ga0070696_1009147802	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	WRSSSGVRTISGAMNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR*
Ga0070704_1009205172	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTTQAPILLFGSYGELDVYASVTDAERAIDPWTLSDGQLSAADASGRVLRVLPIGRSICLTDTGACDPDTVRARLAERLREEGDLGRLVERAVERFGYRR*
Ga0070702_1004128361	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEEGELDRLVERAVERYGF
Ga0070702_1010802143	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	QAPILLFGSYGELDVYASVTDAERAIDPWTLSDGQLSAADASGRVLRVLGVGRSVCLTDTGAIDAETVRARLSERLREDGDLGRLIERAVERFGYRR*
Ga0068861_1009454912	3300005719	Switchgrass Rhizosphere	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELGRLVERAVERYGFRR*
Ga0075428_1008958771	3300006844	Populus Rhizosphere	RSSSGVRTISGAMNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR*
Ga0068865_1005188462	3300006881	Miscanthus Rhizosphere	MAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLSCADASGQIYRVLEVGRSIRLTDTGTTEPEVVRARLAEKLREEGELDTLIERAIARFGYRR*
Ga0068865_1006608941	3300006881	Miscanthus Rhizosphere	GELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR*
Ga0105245_112848742	3300009098	Miscanthus Rhizosphere	MNALPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVERYGFRH*
Ga0075418_126314141	3300009100	Populus Rhizosphere	IDETPWRSSSGVRTISGAMNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR
Ga0111538_104570044	3300009156	Populus Rhizosphere	DPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR*
Ga0126307_100935612	3300009789	Serpentine Soil	MTTQSPILLFGSYGELDVYASISDAERTIDPWTLADGQLSAADASGRVLRVLPIGHSVCLTDTGAIDPETVRARLSVRLREDGDLGRLVERAVERFGYRR*
Ga0126307_101268041	3300009789	Serpentine Soil	SPAKPMRITPDRGIAPLGGFPYKPGMAAPQAPILVFGSYGELDVFASVTEAERAIDPWALSDAQLAAADASGRVLRVLSVGASVRLTDTGESEPEQIRAKLAERLREDGNLDRLVERAIERFGYRR*
Ga0126307_108094142	3300009789	Serpentine Soil	MTAETPILLFGSYGEIEVFASVAEAERSIDPWILSDGQLSAADASGRVLRVLSVGSSVRLTDTGASDPEQIRSRLAERLAEDGNLDRLVERAIERFGYRR*
Ga0126307_114109421	3300009789	Serpentine Soil	MTAQSPILLFGSYGELDVFASVTEAERAIDAWALSDGQLAAADASGRVLRVLSVGSSVRLTDTGASEPEQIRAKLAERLREDGNLDRLVERAIERFGYRR*
Ga0126313_100018739	3300009840	Serpentine Soil	MTADSPILVFGSYGELDVFASVTEAERAIDPWALSDAQLAAADASGRVLRVLSVGASVRLTDTGESEPEQIRAKLAERLREDGNLDRLVERAIERFGYRR*
Ga0126313_108980051	3300009840	Serpentine Soil	EAERAIDSWALADGQLAAADASGRMLRVLSVGPSVRLTETGASDPEQVRAKLAERLKEDGNLDRLVERAIERYGYRR*
Ga0126313_113954121	3300009840	Serpentine Soil	MTAQSPILLFGSYGELDLFASVAEAERAIDPWELSDGQLAAADASGRVLRVLSIGASVRLTETGASEPERIRAKLAERLREEGELERLVARAV
Ga0126305_107712942	3300010036	Serpentine Soil	MTASPQAPILLFGSYGELDVFASVTEAERAIDPWALSDGQLAAADASGRVLRVLSVGSSVRLTDTGASEPEQIRAKLAERLREDGNLDRLVERAIERFGYRR*
Ga0126315_109550272	3300010038	Serpentine Soil	MTTQAPILLFGSYGELDVYASVGDAERTIDPWTLADGQLSAADASGRVLRVLPIGHTVCLTDTGAIDPETVRARLSERLREDGDLGRLVERAVERFGYRR*
Ga0126309_107217512	3300010039	Serpentine Soil	MTAQAPILLFGSYGELDVFASVTEAERAIDPWALSDGQLAAADASGRVLRVLSVGPSVRLTETGTTDPEQIRAKLAERLEEDGALDRLVERAVERFGFRR*
Ga0126308_100811992	3300010040	Serpentine Soil	MTASPQAPILLFGSYGELDVFASLDDAERAIDPWSLSDGQLSACDASGRMLRVLSIGASIRLTDTGASEPEVIRARLSERLREDGELDRLVARAIERYGFRR*
Ga0126308_111285452	3300010040	Serpentine Soil	MTTQAPILLFGSYGELDVYASVGDAERTIDPWTLADGQLSAADASGRVLRVLPIGHSVCLTDTGAIDPETVRARLSERLREDGDLGRLVER
Ga0126314_102562883	3300010042	Serpentine Soil	YGELDVFASVTEAERAIDPWALSDAQLAAADASGRVLRVLSVGASVRLTDTGESEPEQIRAKLAERLREDGNLDRLVERAIERFGYRR*
Ga0126314_107779401	3300010042	Serpentine Soil	ECVRNRLAPAEYSDQTMPAHAPILLFGSYGELDVYASVSDAERAIDPWALSDGQLAAADASGRVLRVLSVGAGVQLTDTGASDPEQTRARLAERLQEDGELDRLVARAVERFGFRR*
Ga0126310_103696752	3300010044	Serpentine Soil	MTASPQAPILLFGSYGELDVFASLDDAERAIDPWLLSDGQLSACDASGRMLRVLSIGASIRLTDTGASEPEVIRARLSERLREDGELDRLVARAIERYGFKR*
Ga0126311_110399421	3300010045	Serpentine Soil	DSVTEAERAIDPWALSDGQLAAADASGRMLRVLSVGASIRLTETGATDPEQVRAKLAERLQEDGNLDRLVERAIERYGYRR*
Ga0126311_112559252	3300010045	Serpentine Soil	MTASPQAPILLFGSYGELDVFASLDDAERAIDPWSLSDGQLSACDASGRMLRVLSIGASIRLTDTGASEPEVIRARLSERLREDGELDRLVARAIERYGF
Ga0126306_118470652	3300010166	Serpentine Soil	MTAQSPILLFGSYGELDVFASVTEAERAIDPWALSDGQLAAADASGRVLRVLSVGSSVRLTDTGASEPEQIRAKLAERLREDGNLDRLVE
Ga0134127_127645901	3300010399	Terrestrial Soil	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEEGELDR
Ga0105246_108061861	3300011119	Miscanthus Rhizosphere	ISPDSPMTAQAPILLFGSYGELDVYASVVDAERAIDPWSLSDGQLSAADASGRVLRVLGVGRSICLTDTGACDPDTVRARLAERLREEGDLGRLVERAVERFGYRR*
Ga0190266_101954073	3300017965	Soil	MMPAGEADAASHPIGGLRRSDGVPTKGAMAAPQAPILLFGSYGELDLFTSVDEAERVIDPHALDDGQLACADAAGQILRVLPVGRSVRLTETGAIDPEEVRARLAERLREEGNLNRLVERAVERYGY
Ga0190266_103371042	3300017965	Soil	FASVDEAERVIDPHALDDGQLACADASGQIYRVLEVGRSIRLTDTGTTEPEVVRARLAEKLREEGELDTLIERAIARFGYRR
Ga0190266_110658781	3300017965	Soil	MAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADATGQIYRVLEVGRSIRITETGSTEPEVVRARLAERLREEGELGVLVERAIERFGYRR
Ga0190265_100408103	3300018422	Soil	MTTAQAPILLFGSYGELDVYASVTEAERSIDAWALADGQLSAADASGRVLRVLSVGASVQLTDTGASDPERIRARLAERLHEDGALDRLIERAVERFGYRR
Ga0190265_104888683	3300018422	Soil	MTTAQAPILLFGSYGELDLYASVTEAERAIDPWALSDGQLAAADASGRVLRVLAVGPSVRLTDTGASEPEQIRARLAERLREDGNLDRLVERAVERFGYRR
Ga0190265_109299473	3300018422	Soil	MRNRSPAAEYSDQTMTAHAPILLFGSYGELDVYASVTDAERAIDPWALSDGQLTAADASGRVLRVLSVGAGVQLTDTGASEPEQIRARLAERLHEDGELPRLVERAVERFGYRR
Ga0190265_112067522	3300018422	Soil	VNVLTIPVPEPPRSRRIPPYAMTTAQAPILLFGSYGELDLYASVTEAERAIDPWALSDGQLAAADASGRVLRVLAVGPSVRLTDTGASEPEQIRARLAERLREDGNLDRLVERAIERFGYRR
Ga0190265_112376222	3300018422	Soil	MTAQAPILLFGSYGELDLFASVTEAERSIDPWALSDGQLAAADASGRVLRVLSIGSSVRLTETGATDPEQIRAKLAERLAEDGNLDRLVERAIERFGYRR
Ga0190275_116960002	3300018432	Soil	MMPAGEANAASHPIGGLRRSDGVPTKGAMAAPQAPILLFGSYGELDLFTSVDEAERVIDPHALDDGQLACADASGQIYRVLGVGHSIRITETGATEPEVVRARLAERLREEGELGALVERAIERFGYRR
Ga0190268_105721021	3300018466	Soil	DLFTSVDEAERVIDPHALDDGQLACADAAGQILRVLPVGRSVRLTETGAIDPEEVRARLAERLREEGNLHRLVERAVERYGYRR
Ga0190268_115675001	3300018466	Soil	LGGIPYKPGMAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLSCADSAGQILRVLSVGHSIRLTETGAAEPEEVRARLAARLREEGELDRLVERAVERFGYRR
Ga0190270_101826492	3300018469	Soil	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLRACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVERYGFRR
Ga0190270_106840411	3300018469	Soil	LRWIPYKSAIAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADASGQIYRVLEVGRSIRITETGATEPEVVRARLAERLREE
Ga0190270_107708621	3300018469	Soil	RVIDPHALDDGQLACADASGQIYRVLEVGRSIRLTDTGTTEPEVVRARLAEKLREEGELDTLIERAIARFGYRR
Ga0190270_108697352	3300018469	Soil	MTAHSPILLFGSYGELDVFASITEAERAIDPWALSDGQLAAADASGRVLRVLSVGSSVRLTDTGATDPEQIRAKLAERLREDGNLDRLVERAIERFGYRR
Ga0190270_111382462	3300018469	Soil	VGIARRLPNTKTEPMTAQSPILLFGSYGELDVFASVAEAERAIDPWALSDGQLAAADASGRVLRVLSVGASVRLTDTGASEPEQIRAKLAERLREDGELDRLVERAIERFGYRR
Ga0190274_103615742	3300018476	Soil	LGGIPYKTRMAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADATGQIYRVLEVGRSIRITETGSTEPEVVRARLAERLREEGELDRLVERAIERFGYRR
Ga0190274_107089652	3300018476	Soil	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVERYGFRR
Ga0190274_114019142	3300018476	Soil	MTAQSPILLFGSYGELDVFASVTEAERAIDPWALADGQLSAADASGRMLRVLSVGPSVRLTETGTTDPEQIRAKLAERLHEDGNLDRLVERAIARFGYRR
Ga0190271_109197681	3300018481	Soil	PHALDDGQLACADASGQIYRVLEVGRSIRITETGSTEPEVVRARLAERLREEGELDRLVERAIERFGYRR
Ga0190264_103139942	3300019377	Soil	MRITPDRGIARLGGIPYKPGMAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLSCADATGQIYRVLEVGRSIRITETGSADPEVVRARLAERLREEGELDRLVERAVERFGYR
Ga0190267_104650082	3300019767	Soil	FGSYGELDLFTSVDEAERVIDPHALDDGQLACADAAGQILRVLPVGRSVRLTETGAIDPEEVRARLAERLREEGNLDRLVERAVERYGYRR
Ga0193742_10069962	3300021976	Soil	MTAQAPILLFGSYGELDVFASVTEAERAIDPWALSDAQLAAADASGRVLRVLSVGASVQLTDTGASEPEQIRSRLAERLREDGNLDRLVERAVERYGYRR
Ga0207688_109916121	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLSCADASGQIYRVLEVGRSIRLTDTGTTEPEVVRARLAEKLREEGELDALVERAIARFGYRR
Ga0207645_101435761	3300025907	Miscanthus Rhizosphere	APILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVERYGFRH
Ga0207645_103190622	3300025907	Miscanthus Rhizosphere	MAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADASGQIYRVLEVGRSIRLTETGTTEPEVVRARLAEKLREEGELDTLIERAIARFGYRR
Ga0207643_104910832	3300025908	Miscanthus Rhizosphere	MAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADASGQIYRVLEVGRSIRLTETGTTEPEVVRARLAEKLREEGELDALIERAIARFGYRR
Ga0207657_103875251	3300025919	Corn Rhizosphere	YASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEEGELDRLVERAVERYGFRH
Ga0207690_103221551	3300025932	Corn Rhizosphere	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR
Ga0207709_107756171	3300025935	Miscanthus Rhizosphere	WRSSSGVRTISGAMNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR
Ga0207669_105267002	3300025937	Miscanthus Rhizosphere	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQ
Ga0207704_115572001	3300025938	Miscanthus Rhizosphere	YGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR
Ga0207704_117886622	3300025938	Miscanthus Rhizosphere	DLFASVDEAERVIDPHALDDGQLSCADASGQIYRVLEVGRSIRLTDTGTTEPEVVRARLAEKLREEGELDTLIERAIARFGYRR
Ga0207689_104373312	3300025942	Miscanthus Rhizosphere	MAAPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEEGELDRLV
Ga0207679_119756172	3300025945	Corn Rhizosphere	SVSDAERAIDPWTLADGQLAAADASGRVLRVLPIGRSICLTDTGATDPDTVRARLAERLREEGDLGRLVERAVERFGYRR
Ga0207712_115726722	3300025961	Switchgrass Rhizosphere	MNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVERYGFRH
Ga0207703_117017961	3300026035	Switchgrass Rhizosphere	GELDVYASLTDAERAIDPWTLSDGQLSAADASGRVLRVLGVGRSVCLTDTGAIDAETVRARLSELLREDGDLGRLIERAVERFGYRR
Ga0207708_107811002	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR
Ga0207641_114953392	3300026088	Switchgrass Rhizosphere	SGVRTISGAMNAPPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVQRYGFRR
Ga0207648_104453122	3300026089	Miscanthus Rhizosphere	MTTQAPILLFGSYGELDVYASVSDAERTIDPWTLADGQLAAADASGRVLRVLGVGRSVCLTDTGASDPDTVRAKLSERLREDGDLGRLIERAVERFGYRR
Ga0247821_109540981	3300028596	Soil	MTAQSPILLFGSYGELDLFASVAEAERAIDAWALSDGQLAAADASGRVLRVLSVGASVRLTDTGASEPEQVRARLAERLREDGELDRLVERAIERFGYRR
Ga0307286_102241372	3300028876	Soil	VTAQAPILLFGSYGELDVFASITEAERAIDPWALSDSQLAAADASGRVLRVLSVGASVRLTDTGASEPEQIRARLAERLREDGELDRLVERAIERFGYRR
Ga0307278_100129574	3300028878	Soil	MTAQAPILLFGSYGELDVFASVTEAERAIDPWSLSDGQLAAADASGRVLRVLSVGASVRLTDTGATEPEQIRARLAERLREDGNLERLVERAIERYGYRR
Ga0247826_103180082	3300030336	Soil	MNALPQAPILLFGSYGELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEEGELDRLVERAVERYGFRH
Ga0247826_104576691	3300030336	Soil	MTTQAPILLFGSYGELDVYASVTDAERAIDPWTLSDGQLSAADASGRVLRVLGVGRSVCLTDTGAIDAEYVRARLSERLREDGDLGRLVERARVGE
Ga0272433_100049629	3300031450	Rock	MPNTPDETMTAAQAPILLFGSYGELDVFASVTEAERAIDPWTLADGQLAAADASGRVLRVLSVGASVRLTDTGAVDPEQIRARLAERLREDGNLDRLVERAVERYGYRC
Ga0307405_104557401	3300031731	Rhizosphere	PPDRGIAALGRIPYKTRMAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADATGQIYRVLEVGRSIRITETGSTEPEVVRARLAERLREEGELDRLVERAIERFGYRR
Ga0307405_111167781	3300031731	Rhizosphere	MSFRVPNTQTERMTAQAPILLFGSYGELDVFASVTEAERAIDPWSLSDGQLAAADASGRVLRVLSVGPSVRLTETGTSDPEQIRAKLAERLEEDGALDRLVERAIERFGYRR
Ga0307413_118002172	3300031824	Rhizosphere	IAALGRIPYKTRMAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADATGQIYRVLEVGRSIRITETGSTEPEVVRARLAERLREEGELDRLVERAIERFGYRR
Ga0307413_119085661	3300031824	Rhizosphere	MTAQSPILIFGSYGELDVFASLTEAERAIDPWALSDGQLAAADASGRMLRVLAVGSSVRLTDTGATDAEQVRAKLAERLQEDGNLDRLVERAIERYGYRR
Ga0307410_104158962	3300031852	Rhizosphere	LGRIPYKTRMAAPQAPILLFGSYGELDLFASVDEAERVIDPHALDDGQLACADATGQIYRVLEVGRSIRITETGSTEPEVVRARLAERLREEGELDRLVERAIERFGYRR
Ga0307410_105736341	3300031852	Rhizosphere	MTAQAPILLFGSYGELDLFDSVTEAERAIEPWALADGQLAAADASGRMLRVLSVGASVRLTETGTTDPEQIRAKLAERLLEDGNLDRLVERAIERYGYRR
Ga0307407_106360762	3300031903	Rhizosphere	MTAQAPILLFGSYGELDVFASVTEAERAIDPWSLSDGQLAAADASGRMLRVLAVGSSVRLTDTGATDAEQVRAKLAERLQEDGNLDRLVERAIERYGYRR
Ga0307409_1006284052	3300031995	Rhizosphere	QAPILLFGSYGELDVFASVTEAERSIDPWALSDGQLAAADASGRVLRVLCVGSSVRLTDTGATDPEQIRARLAELLAEDGNLDRLVERAIERYGYRR
Ga0307409_1012635282	3300031995	Rhizosphere	MTAQSPILLFGSYGELDVFASLTEAERAIDPWALSDGQLAAADASGRVLRVLAVGSSVRLTDTGATDAEQVRAKLAERLQEDGNLDRLVERAIERYGYRR
Ga0307416_1004743502	3300032002	Rhizosphere	MAAPQAPILLFGSYGELDLFASVDEAERVIDPNALDDGQLACADASGQIYRVLEVGRSIRITETGATEPEIVRARLAERLREEGELGVLVERAIERFGYRR
Ga0307416_1021672652	3300032002	Rhizosphere	TQTRRMTAQSPILLFGSYGELDVFASLTEAERAIDPWALSDGQLAAADASGRVLRVLAVGSSVRLTDTGATDAEQVRAKLAERLQEDGNLDRLVERAIERYGYRR
Ga0307414_118740992	3300032004	Rhizosphere	ALSHPPFVGDEDETALARAVNVLTMPVRRPVPAAEYPREPMTAQAPILLFGSYGELDLFDSVTEAERAIEPWALADGQLAAADASGRMLRVLSVGASVRLTETGTTDPEQIRAKLAERLQEDGNLDRLVERAIERYGYRR
Ga0326721_101317981	3300032080	Soil	MTANAPILLFGSYGELEVYASVTDAERAIDPWSLSDGQLAAADASGRVLRVLSVGAGVQLTDTGASDPERIRAKLAERLHEDGELDRLVERAVERFGYRR
Ga0326721_106463352	3300032080	Soil	YGELDLFASVDEAERVIDPHALDDGQLACADATGQIYRVLEVGRSIRITETGSTEPEVVRARLAERLREEGELDRLVERAIERFGYRR
Ga0326721_106795081	3300032080	Soil	MTAQAPILLFGSYGELDLFDSVIEAERAIDPWALADGQLAAADASGRMLRVLSVGASVRLTETGATDPEQVRARLAERLQEEGNLDRLVERAIERYGYRR
Ga0247830_109570662	3300033551	Soil	GELDVYASVDDAERAIDPWSLSDGQLSACDANGRVLRVLSVGASIRLTDTGASEPEVIRARLSERLHEDGELDRLVERAVERYGFRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096830

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences