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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F096820 |
| Family Type | Metagenome |
| Number of Sequences | 104 |
| Average Sequence Length | 62 residues |
| Representative Sequence | SAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Number of Associated Samples | 99 |
| Number of Associated Scaffolds | 104 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 91 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.56 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.423 % of family members) |
| Environment Ontology (ENVO) | Unclassified (34.615 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (47.115 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 60.71% β-sheet: 0.00% Coil/Unstructured: 39.29% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.56 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 104 Family Scaffolds |
|---|---|---|
| PF02541 | Ppx-GppA | 90.38 |
| PF01565 | FAD_binding_4 | 1.92 |
| PF00291 | PALP | 0.96 |
| PF14711 | Nitr_red_bet_C | 0.96 |
| PF01058 | Oxidored_q6 | 0.96 |
| PF07366 | SnoaL | 0.96 |
| PF00571 | CBS | 0.96 |
| PF03786 | UxuA | 0.96 |
| COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
|---|---|---|---|
| COG0248 | Exopolyphosphatase/pppGpp-phosphohydrolase | Signal transduction mechanisms [T] | 180.77 |
| COG0377 | NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase | Energy production and conversion [C] | 0.96 |
| COG1312 | D-mannonate dehydratase | Carbohydrate transport and metabolism [G] | 0.96 |
| COG1740 | Ni,Fe-hydrogenase I small subunit | Energy production and conversion [C] | 0.96 |
| COG1941 | Coenzyme F420-reducing hydrogenase, gamma subunit | Energy production and conversion [C] | 0.96 |
| COG3260 | Ni,Fe-hydrogenase III small subunit | Energy production and conversion [C] | 0.96 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 14.42% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 13.46% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 11.54% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 8.65% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 6.73% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.77% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 4.81% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 2.88% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.88% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.88% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.88% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.88% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.92% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.92% |
| Polar Desert Sand | Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand | 0.96% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.96% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.96% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.96% |
| Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.96% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.96% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Host-Associated | Open in IMG/M |
| 3300003997 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 | Environmental | Open in IMG/M |
| 3300003998 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
| 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
| 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
| 3300006058 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006876 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 | Environmental | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300011400 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2 | Environmental | Open in IMG/M |
| 3300012185 | Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06) | Environmental | Open in IMG/M |
| 3300012895 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2 | Environmental | Open in IMG/M |
| 3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
| 3300012910 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2 | Environmental | Open in IMG/M |
| 3300012912 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2 | Environmental | Open in IMG/M |
| 3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
| 3300012943 | Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY) | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
| 3300018056 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
| 3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
| 3300022889 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4 | Environmental | Open in IMG/M |
| 3300022898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5 | Environmental | Open in IMG/M |
| 3300022915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4 | Environmental | Open in IMG/M |
| 3300023057 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6 | Environmental | Open in IMG/M |
| 3300023067 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5 | Environmental | Open in IMG/M |
| 3300023071 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5 | Environmental | Open in IMG/M |
| 3300023077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6 | Environmental | Open in IMG/M |
| 3300023102 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5 | Environmental | Open in IMG/M |
| 3300023263 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6 | Environmental | Open in IMG/M |
| 3300023266 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4 | Environmental | Open in IMG/M |
| 3300023269 | Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6 | Environmental | Open in IMG/M |
| 3300024055 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6 | Environmental | Open in IMG/M |
| 3300025792 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027410 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-12 (SPAdes) | Environmental | Open in IMG/M |
| 3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
| 3300028589 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1 | Environmental | Open in IMG/M |
| 3300028596 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14 | Environmental | Open in IMG/M |
| 3300028809 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48 | Environmental | Open in IMG/M |
| 3300030336 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1 | Environmental | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031847 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4 | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
| 3300032122 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4 | Environmental | Open in IMG/M |
| 3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI24739J22299_101727152 | 3300001989 | Corn Rhizosphere | LDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV* |
| Ga0055466_101700592 | 3300003997 | Natural And Restored Wetlands | ARIADVSARIEEHLDRAGASNELLREAAERLAVSRARLEVQLQAVREARYTMRRLLWFLPGA* |
| Ga0055472_101288692 | 3300003998 | Natural And Restored Wetlands | FGTETARIAEASASIQEHLDRASASSLLLGEATARLAVSRAKLDVQLDAIREARQTVRRVLWFVPGV* |
| Ga0062589_1012544221 | 3300004156 | Soil | MWRRLKRTGREFSVESERIAEVSAQIETHMDRANASNARLGDAAARLATSRARLEVQLQAIREARYTVRRLLWFLPGV* |
| Ga0063356_1032174632 | 3300004463 | Arabidopsis Thaliana Rhizosphere | ERIAEVSAQIETHMDRANASNARLGDAAARLATSRARLEVQLQAIREARYTVRRLLWFLPGV* |
| Ga0062592_1015458042 | 3300004480 | Soil | ETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0070683_1021123572 | 3300005329 | Corn Rhizosphere | LIKRTGSSFSAESDRIAETSAQMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA* |
| Ga0070670_1011590232 | 3300005331 | Switchgrass Rhizosphere | SAQIETHMDRANASNARLGDAAARLATSRARLEVQLQAIREARYTVRRLLWFLPGV* |
| Ga0070680_1016551802 | 3300005336 | Corn Rhizosphere | AEISSQIETHMDRANASNTRLGDAAARLATSRARLDVQLQAIREARHTMRRLLWFLPGV* |
| Ga0070682_1003859871 | 3300005337 | Corn Rhizosphere | AQIQEHLDRASASGALLGDASARLAASRAKLDVQLQALREARRTVRRVLWFLPGV* |
| Ga0070691_100026667 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | GRVFSAESTRIADVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV* |
| Ga0070674_1000357775 | 3300005356 | Miscanthus Rhizosphere | WRLIKRTGSSFSAESDRIAETSAQMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA* |
| Ga0070659_1000429065 | 3300005366 | Corn Rhizosphere | ETARIAEASAEIQEHLDRASASSALLTEATARLAVSRAKLDVQLEAIREARQTVRRVLWFVPGV* |
| Ga0070701_110106401 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | HLDRASASSALLGDATARLAVSRAKLDVQLQALQEARRTVRRVLWFVPGV* |
| Ga0070705_1017499762 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | TGATFGAETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0070663_1011275971 | 3300005455 | Corn Rhizosphere | ALWRQIKRTGATFGAETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0070685_109049572 | 3300005466 | Switchgrass Rhizosphere | IKRTGSSFSAESDRIAETSAQMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA* |
| Ga0070685_111130082 | 3300005466 | Switchgrass Rhizosphere | IQEHLDRASASSALLGDATARLAVSRAKLDVQLQALQEARRTVRRVLWFVPGV* |
| Ga0068853_1013298281 | 3300005539 | Corn Rhizosphere | QIKRTGATFGAETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0070686_1008096921 | 3300005544 | Switchgrass Rhizosphere | GATFGTETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLQALQEARRTVRRVLWFVPGV* |
| Ga0070696_1017000502 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | IADVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0068855_1015945762 | 3300005563 | Corn Rhizosphere | RIAEASAEIQEHLDRAGASSALLTEATARLAVSRAKLEVQLEAIREARQTVRRVLWFVPGV* |
| Ga0068856_1022728032 | 3300005614 | Corn Rhizosphere | QRIAEVSAQIETHMDRANASNARLGDAAARLATSRARLEVQLQAIREARYTVRRLLWFLPGV* |
| Ga0068852_1008577552 | 3300005616 | Corn Rhizosphere | IRGLALWRQIKRTGATFGAETARIAEVSAGIQEHLDRASASSALLGDATARLAVSRAKLDVQLQALQEARRTVRRVLWFVPGV* |
| Ga0066905_1014502291 | 3300005713 | Tropical Forest Soil | HLDRASGSQERLQEAAARLAVTRARLDVQLQAVREARHTVKRMLWFLPGS* |
| Ga0068870_100588194 | 3300005840 | Miscanthus Rhizosphere | IRGLALWRQIKRTGATFGAETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0068862_1009117362 | 3300005844 | Switchgrass Rhizosphere | SVESERIAESSAQIETHMDRADASNARLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV* |
| Ga0075432_104622731 | 3300006058 | Populus Rhizosphere | AQIETHMDRANASNTRLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV* |
| Ga0075428_1023431292 | 3300006844 | Populus Rhizosphere | RASASGALLGDASARLAASRAKLDVQLQALREARRTVRRVLWFLPGV* |
| Ga0079217_104608692 | 3300006876 | Agricultural Soil | TNAAFGAESARIAEASEQIQVHLDRASASSARLSAAGDRLAVSRAMLDVQLQAVREARQAMRRLLWFLPGT* |
| Ga0111539_100437571 | 3300009094 | Populus Rhizosphere | RADASNALLREAAARLAVSRARLDVQLEAIREARHVMRRLLWFLPGA* |
| Ga0105249_104165881 | 3300009553 | Switchgrass Rhizosphere | QMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA* |
| Ga0126377_110021191 | 3300010362 | Tropical Forest Soil | MDRANAASLRLREATGRFSVSRARLDVQLQAVQEARYTVRRLFWFLGA* |
| Ga0134125_120548861 | 3300010371 | Terrestrial Soil | QIETHMDRANASNTRLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV* |
| Ga0105239_102971451 | 3300010375 | Corn Rhizosphere | ESTRIADVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV* |
| Ga0134126_124771662 | 3300010396 | Terrestrial Soil | RQIKRTGATFGAETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0137312_10548602 | 3300011400 | Soil | QVKRTGGVFSEETARIAEVSEQIQVHLDRASASSERLGSVAERLAVSRAKLDVQLQAIREARHAMRRLLWFLPGV* |
| Ga0136619_103268091 | 3300012185 | Polar Desert Sand | TAALRVESGRIAVARARLDVQLRAIREARLAIGRLLWFVPGA* |
| Ga0157309_102879212 | 3300012895 | Soil | RLFSAESTRIADVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV* |
| Ga0157285_103785931 | 3300012897 | Soil | RTGGTLSAESARIADATADIQEHLDRASASGASLGDAGERLAISRAKLDVQLQALREARQTMRRLLWFLPGV* |
| Ga0157308_100141043 | 3300012910 | Soil | DVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV* |
| Ga0157306_101529511 | 3300012912 | Soil | RASASSALLTEATARLAVSRAKLDVQLEAIREARQTVRRVLWFVPGV* |
| Ga0157297_100706692 | 3300012914 | Soil | ASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0164241_105672462 | 3300012943 | Soil | ALWRQLKRTNKTFGVEASRIAEVSAGIQEHLDRASASSALLSEATARLAVSRAKLDVQLQALQEARRTVRRVLWFVPGV* |
| Ga0164300_100389621 | 3300012951 | Soil | RADASSTRLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV* |
| Ga0164302_107602501 | 3300012961 | Soil | THMDRAHASNTRLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV* |
| Ga0164306_117472961 | 3300012988 | Soil | QIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0164305_121591281 | 3300012989 | Soil | ARIADASAQIQEHLDRASASGALLGDASARLAASRAKLDVQLQALREARRTVRRVLWFLPGV* |
| Ga0157372_101716233 | 3300013307 | Corn Rhizosphere | SAESTRIADVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV* |
| Ga0163163_104248931 | 3300014325 | Switchgrass Rhizosphere | IKRTGRAFSVESERIAEASAQIETHMDRANASNTRLGDAAARLATSRARHEVQLQAIREARHTMRRLLWFLPGV* |
| Ga0157379_106749172 | 3300014968 | Switchgrass Rhizosphere | ERIAETSAQMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA* |
| Ga0173483_108766272 | 3300015077 | Soil | TARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV* |
| Ga0173480_100792363 | 3300015200 | Soil | SAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV* |
| Ga0184623_100748923 | 3300018056 | Groundwater Sediment | RIATAAEEIQGHLDAAEESGARLREASERLRRSRARLDVQLQAVREARATLQRLAPFLPS |
| Ga0190270_110069371 | 3300018469 | Soil | SEETARIAEASEQIQVHLDRASASSERLRAVAERLEVSRAKLEVQLQAIREARHAMRRLLWFLPGV |
| Ga0173482_107156611 | 3300019361 | Soil | ALWRQIKRTGATFGAETARIAEVSAGIQEHLDRASASSALLGDATARLAVSRAKLDVQLQALQEARRTVRRVLWFVPGV |
| Ga0173479_100414901 | 3300019362 | Soil | IADVSAQIQEQLDRSDASGVRLGEAAERLAASQARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0247785_10049691 | 3300022889 | Soil | AQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0247745_10022311 | 3300022898 | Soil | QLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0247790_101620381 | 3300022915 | Soil | GRVFSAESTRIADVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0247797_10611601 | 3300023057 | Soil | LDRASASGTSRGDASARLAVSRAKLEVQLGAVREARQTMRRLLWFLPGV |
| Ga0247743_10481342 | 3300023067 | Soil | ADIQEHLDRASASGASLGVAGERLAVSRAKLDVQLQALREARQTMRRLLWFLPGV |
| Ga0247752_10104251 | 3300023071 | Soil | ARIADVSAGIQEHLERADASNALLREAAARLAVSRARLDVQLQAIREARHVMRRLLWFLPGA |
| Ga0247802_10128812 | 3300023077 | Soil | EHLDRADASNALLREAAARLAVSRARLDVQLQAIREARHVMRRLLWFLPGA |
| Ga0247754_11433582 | 3300023102 | Soil | EHLDRASASSALLTEATARLAVSRAKLDVQLEAIREARQTVRRVLWFVPGV |
| Ga0247800_11039202 | 3300023263 | Soil | GIQEHLDRADASNALLREAAARLAVSRARLDVQLQAIREARHVMRRLLWFLPGA |
| Ga0247789_10287192 | 3300023266 | Soil | LFSAESTRIADVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0247773_11137342 | 3300023269 | Plant Litter | QEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0247794_100661952 | 3300024055 | Soil | LDRADASSALLREAAARLAVSRARLDVQLQAIREARHVMRRLLWFLPGA |
| Ga0247794_102089902 | 3300024055 | Soil | QEQLDRSDASGVRLGEAAERLATSRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0210143_10544802 | 3300025792 | Natural And Restored Wetlands | AEASASIQEHLDRASASSLLLGEATARLAVSRAKLDVQLDAIREARQTVRRVLWFVPGV |
| Ga0207653_102389941 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | QVHFDRASASGARLAGATERLATSRARLEVQLQAIREARHTMRRLLWFLPGA |
| Ga0207645_103004521 | 3300025907 | Miscanthus Rhizosphere | LIKRTGSSFSAESDRIAETSAQMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA |
| Ga0207707_104875591 | 3300025912 | Corn Rhizosphere | RQVKRANRTFGAETARIAEASAEIQEHLDRAGASSALLTEATARLAVSRAKLDVQLEAIREARQTVRRVLWFVPGV |
| Ga0207690_103105781 | 3300025932 | Corn Rhizosphere | FGTETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV |
| Ga0207706_103466972 | 3300025933 | Corn Rhizosphere | EIQEHLDRAGASSALLTEATARLAVSRAKLEVQLEAIREARQTVRRVLWFVPGV |
| Ga0207669_103064712 | 3300025937 | Miscanthus Rhizosphere | VRGLALWRMIKRTGSSFSAESDRIAETSAQMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA |
| Ga0207711_112333921 | 3300025941 | Switchgrass Rhizosphere | KRTGSSFSAESDRIAETSAQMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA |
| Ga0207689_108907612 | 3300025942 | Miscanthus Rhizosphere | TGATFGAETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV |
| Ga0207661_103822252 | 3300025944 | Corn Rhizosphere | LALWRLIKRTGSSFSAESDRIAETSAQMQVHLDRASASGARLAGATERLATSRARLEVQLQAVREARHTMRRLLWFLPGA |
| Ga0207679_105259392 | 3300025945 | Corn Rhizosphere | IETHMDRANASNTRLGDAAARLATSRARLEVQLQAIREARHMMRRLLWFLPGV |
| Ga0207679_111396881 | 3300025945 | Corn Rhizosphere | AFSVESERIAESSAQIETHMDRADASNARLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV |
| Ga0207667_114571481 | 3300025949 | Corn Rhizosphere | ALLTEATARLAVSRAKLEVQLEAIREARQTVRRVLWFVPGV |
| Ga0207640_122061051 | 3300025981 | Corn Rhizosphere | TADIQEHLDRASASGASLGDAGERLAVSRAKLDVQLQALREARQTMRRLLWFLPGV |
| Ga0207678_111630191 | 3300026067 | Corn Rhizosphere | DVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0207708_116028592 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | RTGATFGAETARISDASAQIQEHLDRASASSALLGDATARLAVSRAKLDVQLHALQEARRTVRRVFWFLPGV |
| Ga0207702_122813522 | 3300026078 | Corn Rhizosphere | IQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0207674_106547721 | 3300026116 | Corn Rhizosphere | RASASGARLAGATERLATSRARLDVQLQAVREARHTMRRLLWFLPGA |
| Ga0207675_1018293702 | 3300026118 | Switchgrass Rhizosphere | STRIADVSAQIQEQLDRSDASGVRLGEAAERLAASRARLDVQLQAIREARYTMRRLLWFLPGV |
| Ga0207541_1033512 | 3300027410 | Soil | ARIADVSAGIQEHLDRADASNALLREAAARLAVSRARLDVQLQAIREARHVMRRLLWFLPGV |
| Ga0247828_110965621 | 3300028587 | Soil | LRGLALWRQVKRANRTFGAETARIAEASAEIQEHLDRASASSALLTEATARLAVSRAKLDVQLEAIREARQTVRRVLWFVPGV |
| Ga0247818_101003443 | 3300028589 | Soil | HMDRANASNTRLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV |
| Ga0247821_104115302 | 3300028596 | Soil | VSIWAEASAQIETHMDRANASNTRLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV |
| Ga0247821_109736532 | 3300028596 | Soil | TARIAEVSAQIQVQLDRASASSERLGVVAERLAVSRAKLEVQLAAIREARHAMRRLLWFLPGV |
| Ga0247824_104438341 | 3300028809 | Soil | RTGGAFSEETTRIAEVSEQIQVHLDRASASSDRLRAVGERLAVSRARLDVQLQAIREARHAMRRLLWFLPGV |
| Ga0247826_104687882 | 3300030336 | Soil | EGAFSDETARIAEVSEQIQVHLDRASASSEQLGAVAERLAVSRAKLEVQLQAIREARHAMRRLLWFLPGT |
| Ga0310886_103899801 | 3300031562 | Soil | GHLDRANASSTRLGEVAARLAVSRARLDVQLQAVTEARHTMRRLLWFLPGA |
| Ga0310907_105445771 | 3300031847 | Soil | SARIETHMDRADASNARLGDAAARLATSRARLEVQLQAIREARYTVRRLLWFLPGV |
| Ga0310904_104009962 | 3300031854 | Soil | SASSALLTEATARLAVSRAKLDVQLEAIREARQTVRRVLWFVPGV |
| Ga0310892_100208641 | 3300031858 | Soil | ETTRIAEVSEQIQVHLDRASASSDRLRAVGERLAVSRARLDVQLQAIREARHAMRRLLWFLPGV |
| Ga0310892_112316842 | 3300031858 | Soil | QIQVQLDRASASSERLGVVAERLAVSRAKLEVQLAAIREARHAMRRLLWFLPGV |
| Ga0310906_101422802 | 3300032013 | Soil | RTGHAFSVESERIAGSSAQIETHMDRADASNARLGDAAARLATSRARLEVQLQAIREARHTMRRLLWFLPGV |
| Ga0310895_105426552 | 3300032122 | Soil | LWRQVKRTGGSFGAETERIAEVSAQIQVQLDRASASSERLGVVAERLAVSRAKLEVQLAAIREARHAMRRLLWFLPGV |
| Ga0247830_115713152 | 3300033551 | Soil | ESARIADATADIQEHLDRASASGVSLGDAGERLAVSRAKLDVQLQALREARQTMRRLLWFLPGV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |