Metagenome / Metatranscriptome Family F096819

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096819
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	58 residues
Representative Sequence	MLLRIIEPGLSPELTGDLNRVDAGRLPPGLLVAGAMDGAVMRAAERDGEFVARFAAER
Number of Associated Samples	75
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.73 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.654 % of family members)
Environment Ontology (ENVO)	Unclassified (60.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.53% β-sheet: 0.00% Coil/Unstructured: 60.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03706	LPG_synthase_TM	1.92
PF00872	Transposase_mut	1.92
PF14339	DUF4394	0.96
PF04577	Glyco_transf_61	0.96
PF00988	CPSase_sm_chain	0.96
PF13473	Cupredoxin_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	1.92
COG0505	Carbamoylphosphate synthase small subunit	Amino acid transport and metabolism [E]	1.92
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.27 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	56.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.15 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	56.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.85 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	56.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.58 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	56.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.58 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	56.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.58 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	56.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.58 %
Bradyrhizobium sp. 139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	0.96 %
Unclassified	root	N/A	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459020\|G1E9HNB14IY8JS	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	550	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10119002	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	645	Open in IMG/M
3300004156\|Ga0062589_101267272	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	710	Open in IMG/M
3300005332\|Ga0066388_102620764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300005363\|Ga0008090_10099685	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300005445\|Ga0070708_101622521	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	602	Open in IMG/M
3300005447\|Ga0066689_10627132	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005713\|Ga0066905_101924470	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	547	Open in IMG/M
3300005764\|Ga0066903_101976226	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1119	Open in IMG/M
3300005764\|Ga0066903_105801706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300005764\|Ga0066903_106880529	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	590	Open in IMG/M
3300005764\|Ga0066903_107230403	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	574	Open in IMG/M
3300006844\|Ga0075428_102510957	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	528	Open in IMG/M
3300009156\|Ga0111538_12234393	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	687	Open in IMG/M
3300010043\|Ga0126380_12265177	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300010046\|Ga0126384_11326815	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	668	Open in IMG/M
3300010046\|Ga0126384_11651937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300010048\|Ga0126373_10438991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1338	Open in IMG/M
3300010048\|Ga0126373_11318664	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300010048\|Ga0126373_12579505	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	567	Open in IMG/M
3300010361\|Ga0126378_11994034	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	661	Open in IMG/M
3300010398\|Ga0126383_12119747	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	649	Open in IMG/M
3300010398\|Ga0126383_12202757	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	637	Open in IMG/M
3300010398\|Ga0126383_12377281	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	615	Open in IMG/M
3300010398\|Ga0126383_13037264	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	548	Open in IMG/M
3300010400\|Ga0134122_12499065	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	565	Open in IMG/M
3300012180\|Ga0153974_1166944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300012204\|Ga0137374_10577830	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	860	Open in IMG/M
3300012960\|Ga0164301_10698428	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300012988\|Ga0164306_12027006	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300013306\|Ga0163162_13033309	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	539	Open in IMG/M
3300014325\|Ga0163163_12311163	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	596	Open in IMG/M
3300014969\|Ga0157376_10773389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300016294\|Ga0182041_11817326	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	565	Open in IMG/M
3300016294\|Ga0182041_12251524	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	509	Open in IMG/M
3300016319\|Ga0182033_11125422	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	702	Open in IMG/M
3300016319\|Ga0182033_11964571	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300016319\|Ga0182033_12039979	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300016341\|Ga0182035_10466719	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1073	Open in IMG/M
3300016341\|Ga0182035_12147199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300016357\|Ga0182032_11080414	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	688	Open in IMG/M
3300016357\|Ga0182032_11766888	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	540	Open in IMG/M
3300016371\|Ga0182034_10605408	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	925	Open in IMG/M
3300016371\|Ga0182034_10754588	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300016371\|Ga0182034_11778656	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300016387\|Ga0182040_11552318	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300016422\|Ga0182039_10727403	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300021560\|Ga0126371_11136902	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	919	Open in IMG/M
3300022756\|Ga0222622_11068041	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300025936\|Ga0207670_10116887	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1932	Open in IMG/M
3300026023\|Ga0207677_12313548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300027903\|Ga0209488_10642163	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300028047\|Ga0209526_10037468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3415	Open in IMG/M
3300028791\|Ga0307290_10279639	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	611	Open in IMG/M
3300031544\|Ga0318534_10737968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300031561\|Ga0318528_10581927	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	601	Open in IMG/M
3300031564\|Ga0318573_10615311	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	585	Open in IMG/M
3300031573\|Ga0310915_10739956	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	693	Open in IMG/M
3300031640\|Ga0318555_10279859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300031668\|Ga0318542_10070298	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1636	Open in IMG/M
3300031668\|Ga0318542_10497975	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	633	Open in IMG/M
3300031679\|Ga0318561_10135917	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1314	Open in IMG/M
3300031679\|Ga0318561_10434874	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	722	Open in IMG/M
3300031719\|Ga0306917_10688723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300031719\|Ga0306917_11153899	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	602	Open in IMG/M
3300031736\|Ga0318501_10146073	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1214	Open in IMG/M
3300031740\|Ga0307468_102131350	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	541	Open in IMG/M
3300031744\|Ga0306918_10312694	Not Available	1212	Open in IMG/M
3300031744\|Ga0306918_10756754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300031744\|Ga0306918_10857856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	708	Open in IMG/M
3300031763\|Ga0318537_10026885	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2031	Open in IMG/M
3300031768\|Ga0318509_10648416	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	587	Open in IMG/M
3300031770\|Ga0318521_10062511	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300031771\|Ga0318546_10469310	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300031780\|Ga0318508_1211703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300031781\|Ga0318547_10215523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1150	Open in IMG/M
3300031781\|Ga0318547_10470869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	775	Open in IMG/M
3300031781\|Ga0318547_10837768	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	573	Open in IMG/M
3300031796\|Ga0318576_10302155	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	756	Open in IMG/M
3300031819\|Ga0318568_10715341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300031831\|Ga0318564_10038084	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2071	Open in IMG/M
3300031833\|Ga0310917_10489790	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300031890\|Ga0306925_12229213	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	508	Open in IMG/M
3300031893\|Ga0318536_10640852	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	530	Open in IMG/M
3300031897\|Ga0318520_10644045	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	660	Open in IMG/M
3300031897\|Ga0318520_10775421	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	601	Open in IMG/M
3300031912\|Ga0306921_10146079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2765	Open in IMG/M
3300031912\|Ga0306921_11584636	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	712	Open in IMG/M
3300031941\|Ga0310912_11096732	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300031945\|Ga0310913_10445202	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	920	Open in IMG/M
3300031945\|Ga0310913_11026402	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300031946\|Ga0310910_10167861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1688	Open in IMG/M
3300031946\|Ga0310910_10868640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300031947\|Ga0310909_11024546	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	673	Open in IMG/M
3300031954\|Ga0306926_11900843	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	672	Open in IMG/M
3300032001\|Ga0306922_11264061	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	748	Open in IMG/M
3300032041\|Ga0318549_10567923	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300032042\|Ga0318545_10023411	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1980	Open in IMG/M
3300032076\|Ga0306924_10028370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6047	Open in IMG/M
3300032091\|Ga0318577_10123547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1223	Open in IMG/M
3300032094\|Ga0318540_10621490	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	520	Open in IMG/M
3300032261\|Ga0306920_101424241	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	992	Open in IMG/M
3300032261\|Ga0306920_102197508	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300032261\|Ga0306920_102915205	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	648	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.31%
Host-Associated	Host-Associated	6.73%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.35%
Plants	Host-Associated → Plants	5.77%
Aquatic	Environmental → Aquatic	0.96%
Fungi	Host-Associated → Fungi	0.96%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%
Roots	Host-Associated → Plants → Roots	0.96%
Mycelium	Host-Associated → Fungi → Mycelium	0.96%
Grass	Engineered → Solid Waste → Grass	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.69%
Loam	Environmental → Terrestrial → Soil → Loam	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.96%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2NP_03230850	2170459020	Switchgrass, Maize And Mischanthus Litter	MLLRIIEPGLPPELPGDLNGDQCPAAFHQGLLVAGAMDGAVMRATERDGEFVARFAAECPAVA
AF_2010_repII_A1DRAFT_101190021	3300000597	Forest Soil	MLLRIIEPGLSPELPGDLDGIDAGXLPPGLXVAGXMDGAVMRAAEGHSEFVARFAAERPRLQV
Ga0062589_1012672722	3300004156	Soil	LTIGRSAYLRIIAPRLSPELMSDLDGVDAGRLPPGLLVGGAMNRAVMRAAERDGE
Ga0066388_1026207641	3300005332	Tropical Forest Soil	MVEPGLLPKLTGDLDGVDAGRLPPGLLVAGAMDRAVMRAAERDGEFVARLAAERPR
Ga0008090_100996852	3300005363	Tropical Rainforest Soil	MRLVTLLRIIESGLSPELTGDLNGIDAGRLPPGLLVAGAMDGAVMRAAERDGEFIARFAAERP*
Ga0070708_1016225211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTLLPIIEPGLSPELTGDLNGIDAGRLPPGLLIASAMDRPVMRAAERDGEFVARFAAE
Ga0066689_106271322	3300005447	Soil	VRILQIIAPGLSPELTGDLDRVDAGRLPPCLLVAGAMDRAVMRAAERDGEFVARF
Ga0066905_1019244702	3300005713	Tropical Forest Soil	MLLRIIESGLSPELTGDLNGVDAGRPPPRLLVAGAMDRPVMRAAERDGEFVARFAAERPWLQV
Ga0066903_1019762261	3300005764	Tropical Forest Soil	MVLPIIEPGLSPELPGDLDGVDAGRLPPGLLVAGAMDGAVMRAAERDGEFVARF
Ga0066903_1058017062	3300005764	Tropical Forest Soil	MLLRIIEPGLSPELAGDLNGVDAGRLPPGLLIAGAMDRAVMRAAERDGEFVARFAAERP
Ga0066903_1068805291	3300005764	Tropical Forest Soil	MLLRIIESGLSPELTGDLNGVDAGRLPPGLLVAGAMDRPVMRAAERDGEFVARFA
Ga0066903_1072304032	3300005764	Tropical Forest Soil	MLLRIIELGLSPELAGDLNGVDAGRLPPGLLVAGAMDRAVMRAAERDGEFVA
Ga0075428_1025109572	3300006844	Populus Rhizosphere	VHRNTRLLRIARIIEPGLPPELAGDFDGVDPGCRPPGLLIAGAMDRAMMRAAERDG
Ga0111538_122343931	3300009156	Populus Rhizosphere	LKIVRIIEPGLPPELTGDFDGVDPRRRPPGLLIAGAMDRAMMRAVERDGEFIS
Ga0126380_122651771	3300010043	Tropical Forest Soil	LPIIEPGLSPELTGDLNGVDAGRLPPGLLVASALDRPVMRAAERDGEFVASFA
Ga0126384_113268151	3300010046	Tropical Forest Soil	MLLRIIESGLSPELTGDLNGVDAGRLPPGLLVAGAMDGAVMRAAERDGEFVARF
Ga0126384_116519372	3300010046	Tropical Forest Soil	MLLRIIEPGLSPQVTGDLDGVDAGRLPPGLLVAGAMDGAVMRAAERDGEFVARFAA
Ga0126373_104389913	3300010048	Tropical Forest Soil	MLLRIIESGLSPELPGDLDGVDAGRLPPRLLVAGAMDRAVMRAAERDGEFVARFA
Ga0126373_113186642	3300010048	Tropical Forest Soil	MLLRIIESGLSPELTGDLNGVDAGRLPPGLLVAGAMDGAVMRAAERDGEFVARFA
Ga0126373_125795051	3300010048	Tropical Forest Soil	MLLRIIEPGLSPELAGDLNGVDAGRLPPGLLVAGAMDGAVMRAAERDGEFVARFA
Ga0126378_119940341	3300010361	Tropical Forest Soil	VTLLPIIEPGLSPELTGDLNGVDAGGLPPGLLVAGAMDRPVMRAAERDGEFVA
Ga0126383_121197471	3300010398	Tropical Forest Soil	MLLRITESGLSPELTGDLNGVDAGRLPPGLLVAGAMDGAMMRATERDGEFVAR
Ga0126383_122027572	3300010398	Tropical Forest Soil	MLLRIIDPGLSPELTGDLNWVDAGRLPPGLLVAGAMDRAMMRAAERDGEFVARFAAERPW
Ga0126383_123772811	3300010398	Tropical Forest Soil	MLLRIIESGLSPQLTGDLNGVDAGRLPPGLLVAGAMDGAMMRATERDGEFVAR
Ga0126383_130372641	3300010398	Tropical Forest Soil	MLLRIIEPGLSPELTGDLNGIDAGRLPPGLLVAGAMDRAVMRAAERDGEFVAR
Ga0134122_124990651	3300010400	Terrestrial Soil	LRIVRIIEPGLPPELTGGLDGVDAGSRPPGLLIAGAMNGAVMRAAERDSEFIAGLAAERP
Ga0153974_11669441	3300012180	Attine Ant Fungus Gardens	MLLPIIESGLSPELLGDLTGIDAGRLPPGLLVAGAMDGAVMRAAEGHGEFVARFAAECPR
Ga0137374_105778302	3300012204	Vadose Zone Soil	VCRESRLVTILRIAPRLSPELTSDLDGVDAGRLPPGLLIAGAMDGAVMRAAERDGEFVARFAA
Ga0164301_106984283	3300012960	Soil	MIWRIIEPGLSPELTGDLDGINAGRLPPGLLVAGAMDRTVMRAAERDGEFIAHFAAERPR
Ga0164306_120270061	3300012988	Soil	MILRIIEPGLSPELTGDFDGVDPGRRPPGLLIAGAMNGAVMRAAERDSEFIAGLAAE
Ga0163162_130333091	3300013306	Switchgrass Rhizosphere	VTIWRIIEPGLSPELTGDLDGVDAGRLPPGLLIAGAMDRAMMRAAERDGEFIA
Ga0163163_123111632	3300014325	Switchgrass Rhizosphere	LRIVRIIEPGLSPELTGGLDGIDAGRRPPGLLIAGAMNGAVMRAAERDSEFIAGLA
Ga0157376_107733891	3300014969	Miscanthus Rhizosphere	MRIIEPGLPPELTGDFDGVDPRRRPPGPLVASTMDRAVMRAAERNGEFIAHLAAERPRL
Ga0182041_118173261	3300016294	Soil	VTLLPIIEPGLSPELTGDLNGVDAGRFPPGLLVAGAMDRPVMRAAERDGEFVARFAAERPWL
Ga0182041_122515241	3300016294	Soil	MFLRIIESGLPPELTGDLHGIDAGRLPPRLLVPGAMDRAVMRAAERDGEFVARFAAERP
Ga0182033_111254222	3300016319	Soil	MLLRIIEPGLSPELPGDLDGIDAGCLPPGLFVAGAMDGAVMRAAEGHGEFVARFAAERP
Ga0182033_119645712	3300016319	Soil	MLLRIIESGLSPELPGDLDGVDAGRLPPRLLVAGAMDRAVMRAAERDGEFVARFAAERPWLQ
Ga0182033_120399792	3300016319	Soil	MLLRIIQPGLSPQLTGDLDGIDAGRRPPGLLVPGAMDGAMMRAAERDDEFVARFATERPRLQVTKM
Ga0182035_104667192	3300016341	Soil	MFLRIIESGLPPELTGDLHGIDAGRLPPRLLVPGAMDRAVMRAAERDGEFVARFAAERPWLQV
Ga0182035_121471992	3300016341	Soil	VTLLPIIEPGLSPELTGDLNGIDAGRLPPRLLVASAMDRPVMRAAERDGEFVARFAAERPWLQV
Ga0182032_110804141	3300016357	Soil	MFLRIIEPGLSPELTSDLNGIDAGRLPPGPFVAGAMDRAVMRAAERDGEFVARFAAER
Ga0182032_117668881	3300016357	Soil	VTLLPIPEPGLSPELTGDLNGVDAGRLPPGLLVASAMDRPVMRAAERDGEFVARFAAERP
Ga0182034_106054082	3300016371	Soil	MLLPIIESGLSPELTGDLNGIDAGRLPPGLLVAGAMDGAVMRAAERDGEFIARFAAERPWLQVT
Ga0182034_107545881	3300016371	Soil	MFLRIIEPGLSPELTSDLNGIDAGRLPPGPFVAGAMDRAVMRAAERDGEFVARFAA
Ga0182034_117786562	3300016371	Soil	VIILGTMQPGLSPELTGNLNGVDAGRLPPGLLVAGAMDRAVMRAAERDGEFIACFA
Ga0182040_115523182	3300016387	Soil	MLLRIIESGLSPELTGDLNGVDAGGPPPRLLVAGAMDGAVMRAAERDGEFVAGFAAE
Ga0182039_107274032	3300016422	Soil	MLLPIIEPGLSPEMTGDLNGVDAGGLPPRLLVAGAMDGAVMRAAERDGEFVARFAAER
Ga0126371_111369021	3300021560	Tropical Forest Soil	MLLRIIESGLSPELTGDLNGVDAGRLPPRLLVAGAMDGAMMRATERDGEFVARFAAERP
Ga0222622_110680411	3300022756	Groundwater Sediment	MRIVRIIEPGLPPELTGDFDGVDPGRRPPGLLIAGAMDRAMMRAAERDGEFIAGLAAERP
Ga0207670_101168872	3300025936	Switchgrass Rhizosphere	VRIIEPGLSPKLTGGLDGVDASRRPPGLLIAGAMNGAVMRAAERDSEFIA
Ga0207677_123135481	3300026023	Miscanthus Rhizosphere	LRIVRIIEPGLPPELTGDLERVDPGRRPPGLLVAGAMDRAVMRAAERHREFIAGLAAE
Ga0209488_106421632	3300027903	Vadose Zone Soil	MRIVRIIEPGLPPELTGDFDGVDPGRRPPGLLIAGAMDGAMMRAAERDGEFIAGLTAERPRLQ
Ga0209526_100374681	3300028047	Forest Soil	MRLQIIEPGLSPELTGDLDGIDAGRLPPRPLVAGAMDRAVMRAAERDGEFVARFAA
Ga0307290_102796392	3300028791	Soil	MRIVRIIEPGLPPELTGDFDGVDPGRRPPGLLVAGAMDRAMMRAAERDGEFIWPCGRA
Ga0318534_107379682	3300031544	Soil	MLLRIIEPGLPPELPGDLDWVDAVPGLLVAGAMDRAVMRAAERDRELVARFAAECPRLQITKM
Ga0318528_105819271	3300031561	Soil	MQPGLSPELTGNLNGVDAGRLPPGLLVAGAMDRAVMRAAERDGEFIACFAAECPRLQITK
Ga0318573_106153111	3300031564	Soil	MMLLRIIEPGLSPELAGDLNGIDARRLPPGLLVAGAMDGAVMRAAERDGEFVARFA
Ga0310915_107399562	3300031573	Soil	MLLRIIEPGLPPELPGDLNGIDAGRLPPGPLVAGAMDGAVMRAAERDGEFVARFA
Ga0318555_102798591	3300031640	Soil	MLLRIIESGLSPELTGDLNGVDAGRLPPGLLVAGAMDGAMMRATERDGEFVARFAAERPRSQVAKMM
Ga0318542_100702981	3300031668	Soil	MMLLRIIEPGLSPELAGDLNGIDARRLPPGLLVAGAMDGAVMRAAERDGEFVARFAPERPRLQ
Ga0318542_104979752	3300031668	Soil	MQPGLSPELTGNLNGVDAGRLPPGLLVAGAMDRAVMRAAERDGEFIACFAAE
Ga0318561_101359172	3300031679	Soil	MMLLRIIEPGLSPELAGDLNGIDARRLPPGLLVAGAMDGAVMRAAERDGEFVARFAP
Ga0318561_104348742	3300031679	Soil	MFLRIIEPGLSPELTSDLNGIDAGRLPPGPFVAGAMDRAVMRAAERDGEFVARFAAERPWLQ
Ga0306917_106887232	3300031719	Soil	MLLPIIEPGLSPQLTGDLNGVDAGRLPPRLLVPGAMDGAVMRAAERDGEFVAGFAAERSWLQVA
Ga0306917_111538992	3300031719	Soil	VTLLPIIEPGLSPELTGDLNGVDAGRFPPGLLVAGAMDRPVMRAAERDGEFVARFAAERP
Ga0318501_101460732	3300031736	Soil	MLLRIIEPGLPPELPGDLNGVDADRLPPGLLVAGAMDRPVMRAAERDGEFVARFAAERPWLQVTK
Ga0307468_1021313501	3300031740	Hardwood Forest Soil	VRRESRPDLRTIAPSSSPELTGDLDGVDAGRPPPSLLVAGAMNRAVARAAKRDGELIAHFAAER
Ga0306918_103126943	3300031744	Soil	MGQESGLSPELTGDLNGVDAGGPPPRLLVAGAMDGAVMRAAERDGEFVAGFAAE
Ga0306918_107567543	3300031744	Soil	MLLRIIESGLSPELPGDLDGVDAGRLPPRLLVAGAMDRAVMRAAERDGEFVARFAAERP
Ga0306918_108578561	3300031744	Soil	LRVVEPGLPPELPGDLNGIDAGRLPPGLLVAGAMDGAVMRAAEGHSEFVARFAAERPR
Ga0318537_100268851	3300031763	Soil	MMLLRIIEPGLSPELAGDLNGIDARRLPPGLLVAGAMDGAVMRAAERDGEFVARFAPERP
Ga0318509_106484161	3300031768	Soil	VTLLPIIESGLSPELTGDLNGVDAGGLPPGLLVAGAMDRAVMRAAERDGEF
Ga0318521_100625111	3300031770	Soil	MFLRIIEPGLSPELTSDLNGIDAGRLPPGPFVAGAMDRAVMRAAERDGEFVARFAAERPWLQAAKM
Ga0318546_104693101	3300031771	Soil	MLLRIIEPGLSPELTGDLNRVDAGRLPPGLLVAGAMDGAVMRAAERDGEFVARF
Ga0318508_12117033	3300031780	Soil	MGQESGLSPELTGDLNGVDAGGLPPGLLVAGAMDRPVMRAAERDGEFIARF
Ga0318547_102155231	3300031781	Soil	MLLPIIEPGLSPELTGDLNGVNAGRLPPGLLVAGAMDRAVMRTAERDREFVARFAAERPRLQ
Ga0318547_104708691	3300031781	Soil	MLLPIIEPGLSPEMTGDLNGVDAGGLPPRLLVAGAMDGAVMRAAERDGEFVAGFAAERSWLQVAKMM
Ga0318547_108377681	3300031781	Soil	MLLRIIEPGLSPELPCDLDGIDAGRLPPGLLVAGTMDGAMVGAAERDDEFVARFA
Ga0318576_103021551	3300031796	Soil	MLLRIIEPGLSPELTGDLNGVDAGRLPPGLLVPGAMDGAVMRAAERDGEFVARFA
Ga0318568_107153413	3300031819	Soil	MGQESGLSPELTGDLNGVDAGGPPPRLLVAGAMDGAVMRAAERDGEFVAGFAAERSWLQ
Ga0318564_100380842	3300031831	Soil	MLLRIIEPGLPPELPGDLNGVDADRLPPGLLVAGAMDRPVMRAAERDGEFVARFAAERPR
Ga0310917_104897902	3300031833	Soil	MLLRIIESGLSPELTGDLNGVDAGRLPPGLLVAGAMDGAMMRATERDGEFVAR
Ga0306925_122292132	3300031890	Soil	VTLLPIIEPGLSPELTGDLNGVDAGGLPPGLLIASAMDRSVMRAAERDGEFVARFA
Ga0318536_106408522	3300031893	Soil	MLLRIIEPGLSPELTGDLNRVDAGRLPPGLLVAGAMDGAVMRAAERDGEFVARFAAER
Ga0318520_106440452	3300031897	Soil	MLLRIIEPGLSPELPCDLDGIDAGRLPPGLLVAGTMDGAMVGAAERDDEFVARF
Ga0318520_107754212	3300031897	Soil	MLLRIIQPGLSPQLTGDLDGIDAGRRPPGLLVPGAMDGAMMRAAERDGEFIAGLAAERPRLQ
Ga0306921_101460791	3300031912	Soil	LRVVEPGLPPELPGDLNGIDAGRLPPRLLVAGAMDGAVVGAAERDDEFVARFAAERPWL
Ga0306921_115846361	3300031912	Soil	MLLRIIEPGLPPELPGDLDWVDAGRLPPGLLVAGAMDRAVMRAAERDRELVARFAAE
Ga0310912_110967321	3300031941	Soil	MLLPIVKPGLSLELAGDLNGVDAGRLPPRLLVAGAMDGAMMRAAERDGEFVARFAAERP
Ga0310913_104452021	3300031945	Soil	MLLRIIEPGLPPELTSDLNGIDAGRPPPRLLVAGAMDRAVMRAAERDGEFVARFAAKRP
Ga0310913_110264021	3300031945	Soil	MVQPGLLPEVTRDLNGVDAGGLPPGLLIAGAVDRAVMRAAERDGEFVARFAAERPWLQVAKM
Ga0310910_101678611	3300031946	Soil	MGQESGLSPELTGDLNGVDAGGPPPRLLVAGAMDGAVMRAAERDGEFVAGFAAERSW
Ga0310910_108686401	3300031946	Soil	VWLLRIIKPGLPPELTGDLNGIDAGRLPPGLLVAGAMNRAVMRAAERDGEFVARFATERSRL
Ga0310909_110245461	3300031947	Soil	MLLQVIEPGLPPELPGDLNGIDASRPPPGLLVAGAMDRAVMRAAERDGEFVARFAAER
Ga0306926_119008432	3300031954	Soil	MLLPIIEPGLSPELTGDLNGVDAGRLPPGLLVAGAMDRAVMRAAERHGEFVADFAA
Ga0306922_112640611	3300032001	Soil	MLLPIVKPGLSLELAGDLNGVDAGRLPPRLLVAGAMDGAMMRAAERDGEFVARFA
Ga0318549_105679232	3300032041	Soil	MLLRIIEPGLPPELPGDLDWVDAVPGLLVAGAMDRAVMRAAERDRELVARFAAE
Ga0318545_100234111	3300032042	Soil	MLLRIIEPGLPPELPGDLNGVDADRLPPGLLVAGAMDRPVMRAAERDGEFVARFAAERPWLQVTKM
Ga0306924_100283706	3300032076	Soil	MFLRIIESGLPPELTGDLHGIDAGRLPPRLLVPGAMDRAVMRAAERDGEFVARFAAERPW
Ga0318577_101235471	3300032091	Soil	MLLPIIEPGLSPELTGDLNGVNAGRLPPGLLVAGAMDRAVMRTAERDREFVARFA
Ga0318540_106214901	3300032094	Soil	MLLRIIESGLSPELTGDLNGVDAGRLPPRLLVAGAMDGAMMRATERDGEFVARFAAANNPIRIIFATCN
Ga0306920_1014242411	3300032261	Soil	MIEPGLSPELAGDLNGVDAGRLPPGLLVAGAMDRAVMRAAERDGEFVARFAAERPWLQVAKMM
Ga0306920_1021975081	3300032261	Soil	MLLPIIESGLSPELTGDLNGVDAGRLPPRLLVAGAMDRAVMRAAERDGEFVARFAAERPRLQVAKM
Ga0306920_1029152052	3300032261	Soil	MLLRIIEPGLSPEPAGDLDGVDAGRLPPGLLVASAMDGAVMRTAERDGEFVARF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096819

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences