NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096815

Metagenome / Metatranscriptome Family F096815

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096815
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 94 residues
Representative Sequence RSSGVVLSVDPRASTLVLEDRGAAGEAGRLRVELAPDARVVLSERDDQAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK
Number of Associated Samples 91
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 32.69 %
% of genes near scaffold ends (potentially truncated) 61.54 %
% of genes from short scaffolds (< 2000 bps) 87.50 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (58.654 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(20.192 % of family members)
Environment Ontology (ENVO) Unclassified
(41.346 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.423 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.44%    β-sheet: 43.90%    Coil/Unstructured: 53.66%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.77
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
e.58.1.1: Viral ssDNA binding proteind1urja_1urj0.68003
b.40.4.7: Phage ssDNA-binding proteinsd1je5a_1je50.65563
b.40.4.0: automated matchesd6nrza16nrz0.63917
b.40.4.0: automated matchesd3nema13nem0.62376
b.40.4.1: Anticodon-binding domaind3a74a13a740.61989

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF13087AAA_12 11.54
PF03473MOSC 4.81
PF01435Peptidase_M48 3.85
PF00903Glyoxalase 3.85
PF00535Glycos_transf_2 1.92
PF07355GRDB 1.92
PF08299Bac_DnaA_C 0.96
PF02786CPSase_L_D2 0.96
PF00528BPD_transp_1 0.96
PF13683rve_3 0.96
PF00005ABC_tran 0.96
PF01255Prenyltransf 0.96
PF00982Glyco_transf_20 0.96
PF13604AAA_30 0.96
PF10531SLBB 0.96
PF13231PMT_2 0.96
PF01894UPF0047 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0020Undecaprenyl pyrophosphate synthaseLipid transport and metabolism [I] 0.96
COG0380Trehalose-6-phosphate synthase, GT20 familyCarbohydrate transport and metabolism [G] 0.96
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 0.96
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 0.96

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.65 %
All OrganismsrootAll Organisms41.35 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10176892All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium1101Open in IMG/M
3300002121|C687J26615_10139859Not Available611Open in IMG/M
3300004156|Ga0062589_100161813All Organisms → cellular organisms → Bacteria1554Open in IMG/M
3300004479|Ga0062595_101920666Not Available568Open in IMG/M
3300005295|Ga0065707_10430144Not Available821Open in IMG/M
3300005345|Ga0070692_10043212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2317Open in IMG/M
3300005444|Ga0070694_101120223Not Available657Open in IMG/M
3300005459|Ga0068867_101738026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300005467|Ga0070706_100074666All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3138Open in IMG/M
3300005467|Ga0070706_100244671All Organisms → cellular organisms → Bacteria → Acidobacteria1675Open in IMG/M
3300005468|Ga0070707_101712512All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium Gr01-1014_106596Open in IMG/M
3300005471|Ga0070698_100103153All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2822Open in IMG/M
3300005718|Ga0068866_10370682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium915Open in IMG/M
3300006041|Ga0075023_100219024Not Available744Open in IMG/M
3300006845|Ga0075421_100334232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1834Open in IMG/M
3300006903|Ga0075426_10447074All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300007076|Ga0075435_100310197All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei1350Open in IMG/M
3300009078|Ga0105106_10164189Not Available1628Open in IMG/M
3300009088|Ga0099830_10245888Not Available1414Open in IMG/M
3300009089|Ga0099828_10158666All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2002Open in IMG/M
3300009153|Ga0105094_10752678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia572Open in IMG/M
3300010391|Ga0136847_12692046Not Available504Open in IMG/M
3300010400|Ga0134122_11101349Not Available787Open in IMG/M
3300011269|Ga0137392_10335238Not Available1252Open in IMG/M
3300011271|Ga0137393_10881066Not Available764Open in IMG/M
3300011419|Ga0137446_1045333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium971Open in IMG/M
3300011429|Ga0137455_1058887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1092Open in IMG/M
3300011443|Ga0137457_1080126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1008Open in IMG/M
3300012035|Ga0137445_1008665Not Available1765Open in IMG/M
3300012040|Ga0137461_1128819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia736Open in IMG/M
3300012189|Ga0137388_10004023All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria9593Open in IMG/M
3300012189|Ga0137388_10864889Not Available837Open in IMG/M
3300012203|Ga0137399_10884782Not Available752Open in IMG/M
3300012205|Ga0137362_10267697All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla1477Open in IMG/M
3300012205|Ga0137362_10379935Not Available1224Open in IMG/M
3300012362|Ga0137361_10420790Not Available1227Open in IMG/M
3300012362|Ga0137361_11059055Not Available731Open in IMG/M
3300012685|Ga0137397_10338543All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium1121Open in IMG/M
3300012917|Ga0137395_10129718All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1707Open in IMG/M
3300012917|Ga0137395_10878887All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla649Open in IMG/M
3300012923|Ga0137359_10367345Not Available1278Open in IMG/M
3300012923|Ga0137359_11550439Not Available550Open in IMG/M
3300012925|Ga0137419_10097685Not Available2026Open in IMG/M
3300012927|Ga0137416_11876261Not Available548Open in IMG/M
3300012929|Ga0137404_10276080Not Available1450Open in IMG/M
3300012929|Ga0137404_11548326Not Available614Open in IMG/M
3300012930|Ga0137407_10880135Not Available847Open in IMG/M
3300014873|Ga0180066_1109982Not Available568Open in IMG/M
3300014881|Ga0180094_1156419Not Available534Open in IMG/M
3300014884|Ga0180104_1043279Not Available1190Open in IMG/M
3300017994|Ga0187822_10313155Not Available557Open in IMG/M
3300018000|Ga0184604_10178422Not Available716Open in IMG/M
3300018028|Ga0184608_10303372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia702Open in IMG/M
3300018028|Ga0184608_10432747Not Available568Open in IMG/M
3300018052|Ga0184638_1043766Not Available1627Open in IMG/M
3300018053|Ga0184626_10014689Not Available3114Open in IMG/M
3300018056|Ga0184623_10524221Not Available503Open in IMG/M
3300018061|Ga0184619_10229373Not Available854Open in IMG/M
3300018066|Ga0184617_1016353Not Available1582Open in IMG/M
3300018422|Ga0190265_10447851All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium1397Open in IMG/M
3300018422|Ga0190265_12072145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia673Open in IMG/M
3300019255|Ga0184643_1164758Not Available793Open in IMG/M
3300019259|Ga0184646_1555400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia754Open in IMG/M
3300019886|Ga0193727_1003837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus isoporae6186Open in IMG/M
3300020001|Ga0193731_1127120Not Available643Open in IMG/M
3300020002|Ga0193730_1090997Not Available855Open in IMG/M
3300020060|Ga0193717_1191996Not Available559Open in IMG/M
3300020580|Ga0210403_10678519Not Available827Open in IMG/M
3300021073|Ga0210378_10075268Not Available1322Open in IMG/M
3300021178|Ga0210408_10005311All Organisms → cellular organisms → Bacteria11336Open in IMG/M
3300021432|Ga0210384_10096607Not Available2651Open in IMG/M
3300021559|Ga0210409_11507181Not Available548Open in IMG/M
3300022534|Ga0224452_1258920Not Available532Open in IMG/M
3300025910|Ga0207684_10001286All Organisms → cellular organisms → Bacteria27674Open in IMG/M
3300025910|Ga0207684_10659055All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina cetonica891Open in IMG/M
3300025934|Ga0207686_10599982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium866Open in IMG/M
3300026089|Ga0207648_11895980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300026118|Ga0207675_100703855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1019Open in IMG/M
3300026345|Ga0257148_1023853Not Available509Open in IMG/M
3300026371|Ga0257179_1004028Not Available1307Open in IMG/M
3300026480|Ga0257177_1024128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium876Open in IMG/M
3300027181|Ga0208997_1019228Not Available957Open in IMG/M
3300027873|Ga0209814_10191171All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium883Open in IMG/M
3300028711|Ga0307293_10059551Not Available1193Open in IMG/M
3300028719|Ga0307301_10267191Not Available560Open in IMG/M
3300028784|Ga0307282_10625757Not Available522Open in IMG/M
3300028792|Ga0307504_10360379Not Available563Open in IMG/M
3300028814|Ga0307302_10702156Not Available503Open in IMG/M
3300028828|Ga0307312_10619858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia716Open in IMG/M
3300030006|Ga0299907_10500801Not Available960Open in IMG/M
3300030619|Ga0268386_10150031Not Available1776Open in IMG/M
(restricted) 3300031248|Ga0255312_1068442All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300031720|Ga0307469_10321495Not Available1285Open in IMG/M
3300031720|Ga0307469_10735581Not Available898Open in IMG/M
3300031740|Ga0307468_100125357All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium1591Open in IMG/M
3300031820|Ga0307473_11109822Not Available583Open in IMG/M
3300032180|Ga0307471_100000250All Organisms → cellular organisms → Bacteria27152Open in IMG/M
3300032180|Ga0307471_100313567Not Available1662Open in IMG/M
3300032180|Ga0307471_101040425All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300033412|Ga0310810_11273681All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300033500|Ga0326730_1002795All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4042Open in IMG/M
3300033501|Ga0326732_1021298Not Available1114Open in IMG/M
3300033813|Ga0364928_0159397Not Available556Open in IMG/M
3300034090|Ga0326723_0280227Not Available746Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.42%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil7.69%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.73%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.85%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.88%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.88%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.92%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.92%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.96%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.96%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.96%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.96%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002121Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011419Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012035Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2EnvironmentalOpen in IMG/M
3300012040Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300014881Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1DaEnvironmentalOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026345Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-AEnvironmentalOpen in IMG/M
3300026371Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-BEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033500Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fractionEnvironmentalOpen in IMG/M
3300033501Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fractionEnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1017689243300001661Forest SoilVDPRARMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPTK*
C687J26615_1013985923300002121SoilGVVLSVEPGARMLVLEXESAAGRXRVELAPDARVVLSERDEQAEDLSHPFKDTAIGLADVRRGDYVVVEMRGAEGTELARSVVVTFRPQ*
Ga0062589_10016181313300004156SoilAPPPAKRVPAPIISTRSSGVVLSVDPRARQLVLEDRGAAGEAARLRIELAPDARVLLSEREDQPADPSRPFKDTTIDLSDVRRGDYVVVERRGPEGKALARSVVVTFRANK*
Ga0062595_10192066623300004479SoilPAPPSSPPPVRVVTTRSSGLVLSVNPTARTLVLEDRGAAAAASRLRVELAPDARVVLPKRDDRAEDLSHPFKDTVISLSDIRKGDFVVVEMRGPEGKALARSLVVTFRSHEEAGGPAQPMK*
Ga0065707_1043014423300005295Switchgrass RhizosphereGVVLSVDPRARMLVLEDRGAAGEAGRLHIELAPDASVALSERNDQVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPVK*
Ga0070692_1004321233300005345Corn, Switchgrass And Miscanthus RhizosphereRGAAGEAARLRIELAPDARVLLSEREDQPADPSRPFKDTTIDLSDVRRGDYVVVERRGPEGKALARSVVVTFRANK*
Ga0070694_10112022313300005444Corn, Switchgrass And Miscanthus RhizosphereMLVLEDRGATGDAGRLHIELAPDASVALSERNDQVADLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSV
Ga0068867_10173802623300005459Miscanthus RhizospherePPTVSRAETIVPSVAAPPPAKRVPAPIISTRSSGVVLSVDPRARQLVLEDRGAAGEAARLRIELAPDARVLLSEREDQPADPSRPFKDTTIDLSDVRRGDYVVVERRGPEGKALARSVVVTFRANK*
Ga0070706_10007466623300005467Corn, Switchgrass And Miscanthus RhizosphereVLSVDPSARTLVLEDMGAGAQMSRLQVELAPDARVALSERDDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPQGSAVARSVVVTFRAK*
Ga0070706_10024467133300005467Corn, Switchgrass And Miscanthus RhizosphereMGAGAQVSRLRVELAQDARGVLSERDDRAEDLSHPFKDTMISLSDVRKGDFVVVEMRGPQGTAVARLVVVTFRAK*
Ga0070707_10171251213300005468Corn, Switchgrass And Miscanthus RhizosphereLRVELAPDARVVLSERDDRAEDPSHPFKDTVISLSDIRKGDFVVVEMRGSEGTSRARSVVVTWRPPPSG*
Ga0070698_10010315323300005471Corn, Switchgrass And Miscanthus RhizosphereVLSVDPSARTLVLEDMGVGAQMSRLQVELAPDARVALSERDDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPQGSAVARSVVVTFRAK*
Ga0068866_1037068223300005718Miscanthus RhizospherePTVSRAETIVPSVAAPPPAKRVPAPIISTRSSGVVLSVDPRARQLVLEDRGAAGEAARLRIELAPDARVLLSEREDQPADPSRPFKDTTIDLSDVRRGDYVVVERRGPEGKALARSVVVTFRANK*
Ga0075023_10021902413300006041WatershedsTDPPGRVGTTRSSGIVLAVNPGARTLVPQDMGAAPEAWKRHVELAPDPRVVRSERADRVEALSHPFTDTVISLSDVRKGDFVVVEMRGPEGTAVAQTIVVTFRGP*
Ga0075421_10033423233300006845Populus RhizosphereVLSVDPKARALVLEDRGATAERLRVELASDARVVLSERDANAEDPSHPFKDTAISLSDVRHGDYVVVEMRGPEGKELARSVVVTFRPH*
Ga0075426_1044707423300006903Populus RhizosphereTARTLLLEDRGAAVAASRLRVELAPDARVVLSERDNRAEDLRHPFKDTVISLSDIRKGDFVVVEMRGPEGKALARSLVVTFRSHEGTGGRAPLVK*
Ga0075435_10031019713300007076Populus RhizosphereAASRLRVELAPDARVVLSERDNRAEDLRHPFKDTVISLSDIRKGDFVVVEMRGPEGKALARSLVVTFRSHEGTGGRAPLVK*
Ga0105106_1016418923300009078Freshwater SedimentMRFSGVGLSVDPRAGMLVVDTGAAGEAGRLRVELAPDARVVLSERNDQAEDLRRPFKDTVTSLSDVRRGDYVVVERRGPEGKELAHSVVVTFRPMK*
Ga0099830_1024588813300009088Vadose Zone SoilMRVVTTRSSGIVLSVNPSARTLVLQDMEAAAEVRRLRVELAPDARVVLSERDDQAEDLSHPFKDTMISLSDVRTGDFVVVEMRGPEGKALARSVVVTFRPGQGASGPSQPVK*
Ga0099828_1015866633300009089Vadose Zone SoilMRVVTTRSSGIVLSVNPRARTLVLQDMEAAAEGRRLRVELAPDARVVLSERDDQAEDLSHPFKDTMISLSDVRTGDFVVVEMRGPEGKALARSVVVTFRPGQGASGPSQPVK*
Ga0105094_1075267823300009153Freshwater SedimentGRLRVELAPDARVVLSERNDQAEDLSRAFKDTVISLSDVRRGDYVVVERRGPEGKELAHSVVVTFRPMK*
Ga0136847_1269204613300010391Freshwater SedimentARVLVLGDRGAAGAAGRLRVELASDARVVLSERDERADDLSRLFKDTVIDLSDIGRGDYVVVERSGPEGKQLAHSIVVTFRNMK*
Ga0134122_1110134923300010400Terrestrial SoilVQSVDPRARSLVLEERGVAGTGRLRVELAPDARVVLSQREARAADPTHPFTDTPIDLSDVRRGDYVVVDIQGPEGKELGRSVTVTFRSP*
Ga0137392_1033523823300011269Vadose Zone SoilMVLSVDPSARTLVVENMGAPAQVSRLRVALAPDARVVLSERDDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPQGTAVARSVVVTFRAK*
Ga0137393_1088106613300011271Vadose Zone SoilMGAGAQVSRLRVELAPDARVVLSERDDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPQGTAVARSVVVTFRAK*
Ga0137446_104533313300011419SoilLPPSRPAPVRVSARSSGVVLSVDPRASTLVLEGGAAAAGRLRVELAPDARVVLSERDDQAEDLSRPFKDTVISLSDVRRGDYVVVEMRGPEGKELARSVVVTFRPK*
Ga0137455_105888713300011429SoilLSGVVLSVDPRARVLVFEDRGTAAAERLRVELAPDARVVLSERDANAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK*
Ga0137457_108012613300011443SoilRSSGVVLSVDPRASTLVLEDRGAAGEAGRLRVELAPDARVVLSERDDQAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK*
Ga0137445_100866513300012035SoilVLSVDPRASTLVLEDRGAAAAGRLRVEVAPDARVVLSERDDQAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKERARS
Ga0137461_112881913300012040SoilVSTRFSGVVLSVDPRASTLVLEDRGAAAAAGRLRVEVAPDARVVLSERDDQAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK*
Ga0137388_1000402313300012189Vadose Zone SoilAAGRLRVELAPDARVVLSERDDRAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK*
Ga0137388_1086488913300012189Vadose Zone SoilVVENMGAPAQVSRLRVALAPDARVVLSERDDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPQGTAVARSVVVTFRAK*
Ga0137399_1088478223300012203Vadose Zone SoilMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPTK*
Ga0137362_1026769713300012205Vadose Zone SoilVRVVTTRSSGLVLSVNPRARTLVLEDRGAAAAASGLRVELAPDARVVLSERDDRAEDLSHPFKDTLISLSDVRRGDFVVVEMRGPEGKALARSVVVTFRGHEGVGGPAPLVK*
Ga0137362_1037993523300012205Vadose Zone SoilMVLSVDPSARTLVLEDMGAGAQVSRLRVELAPDARVVLSEGDDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPQGTAVARSVVVTFRAK*
Ga0137361_1042079023300012362Vadose Zone SoilVRVVTTRSSGLVLSVNPRARTLVLEDRGAAAAASGLRVELAPDARVVLSERDDRAEDLSHPFKDTLISLSDVRRGDFVVVEMRGPEGKALAR
Ga0137361_1105905523300012362Vadose Zone SoilAPQAETISPDVGPVPLPSRPPARVISTRLSGMVLSVDPSARTLVVENMGAPAQVSRLRVALAPDARVVLSERDDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPQGTAVARSVVVTFRAK*
Ga0137397_1033854333300012685Vadose Zone SoilMLVLEDRGAAGDAGRLRIELAADARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPTK*
Ga0137395_1012971833300012917Vadose Zone SoilMGAGAQVSRLRVELAPDARVVLSERDDRAEDLSHPFKETVISLSDVRKGDFAVVELRGPQGTAVARSVVVTFRAK*
Ga0137395_1087888713300012917Vadose Zone SoilSPVRVVTTRSSGLVLSVNPRARTLVLEDRGAAAAASGLRVELAPDARVVLSERDDRAEDLSHPFKDTLISLSDVRRGDFVVVEMRGPEGKALARSVVVTFRGHEGVGGPAPLVK*
Ga0137359_1036734513300012923Vadose Zone SoilMRSSGLVLSVNPRARTLVLEDRGAAAAASGLRVELAPDARVVLSERDDRAEDLSHPFKDTLISLSDVRRGDFVVVEMRGPEGKALARSVVVTFRGHEGV
Ga0137359_1155043923300012923Vadose Zone SoilDPSARTLVLEDMGAGAQMSRLRVELAPDARVVLSERDDRANDLSHPFKDTAISLSDVRKGDFVVVEMRGPEGKARARSVVVTWRPPPSG*
Ga0137419_1009768523300012925Vadose Zone SoilMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPMK*
Ga0137416_1187626113300012927Vadose Zone SoilMGAGAQVSRLRVELAPDARVVLSERDDRAEDLSHPFTDTVISLSDVRKGDFVGVEMRGPEGKARARSVAVTLRGAEGAGRSAQPTK*
Ga0137404_1027608033300012929Vadose Zone SoilVTTRFTGVVLSVDPRARMLVLEDRGATGDAGRLHIELAPDASVALSERNDQVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPVK*
Ga0137404_1154832613300012929Vadose Zone SoilTVVPRAAAPPPPRQGPAPIVSTRSSGVVLSVDPRARLLVLEDRGAAGEAARLRIELAPDARVLLSERADQPADPSRPFKDTTIDLSDVRRGDYVVVERRGPEGKALARSVVVTFRANK*
Ga0137407_1088013523300012930Vadose Zone SoilMLVLEDRVAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPTK*
Ga0180066_110998213300014873SoilPRSGTSALFNLLAADPAARPLPPSRPAPVRIVSTRSSGVVLSVDPSARTLVLDDRGTAAAGRRRVELAPDARVALSERDANAEDLSRVFKDTAISLADVRRGDYVVVEMQGPEGKELARSVVVTFRPH*
Ga0180094_115641923300014881SoilAPVRIVSTRSSGVVLSVDPSARTLVLDDRGTAAAGRRRVELAPDARVALSERDANAEDLSRVFKDTAISLADVRRGDYVVVEMRWPEGKELAHSVAVTFRPP*
Ga0180104_104327913300014884SoilLVLDDRGAAAAGRRRVELAPDARVALSERDANAEDPSHPFKDTVISLSDVARGDYVVVEMRGPEGKELARSVVVTFRPH*
Ga0187822_1031315513300017994Freshwater SedimentPAAASTPDTPSLAARLAPRATPSPGHVVTTRASGIVLAVDPRARALVLQDMGAVAEGRTRHVELARDARVVRSERLDRVEDLSHPFTDTVISLSDVRKGDFVVVEMRGPEGTAVARSVVVTFRATDAAGGPARP
Ga0184604_1017842223300018000Groundwater SedimentSVDPRARMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTFRPTK
Ga0184608_1030337223300018028Groundwater SedimentFKDRGTAAAERLRVELAPDVRVALSERDANAEDPSHPFKDTVINLSDVRRGDYVVVEMRGPEGKELARSVVVTFRPK
Ga0184608_1043274713300018028Groundwater SedimentMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTFRPTK
Ga0184638_104376623300018052Groundwater SedimentVRVSTRSSGVVLSVDPRARTLVLEDRGAAGEAGRLRVELAPDARVVLSERDDQAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKEQARSVVVTFRPK
Ga0184626_1001468933300018053Groundwater SedimentVRVSTRSSGVVLSVDPRASMLVLEDRRAAGEAGRLRVELAPDARVVLSERDDQAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK
Ga0184623_1052422113300018056Groundwater SedimentMLVLEDRRAAGEAGRLRVELAPDARVVLSERDDQAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK
Ga0184619_1022937323300018061Groundwater SedimentMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTFRPLK
Ga0184617_101635333300018066Groundwater SedimentMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFTDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTFRPMK
Ga0190265_1044785123300018422SoilMRSTGVVLAVDAKARTLLVEDRGAVGDTARLRIEVAPDARVVLSVRDDQAEDVTRPFKDTVIDLAEVRRGDYVVVERRGPEGQELASSVVVTLRPTQ
Ga0190265_1207214533300018422SoilRLIVLEDRGGAAGSGRLRIELAPDARVVLSERDDKAEDLSHPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVAVTFRP
Ga0184643_116475813300019255Groundwater SedimentMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVLVTFRPTK
Ga0184646_155540013300019259Groundwater SedimentSARLSGVVVSVDPRARVLVFEDRGSAAAERLRVELAPDARVALSERDANAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKEQARSVVVTFRPK
Ga0193727_100383733300019886SoilMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPTK
Ga0193731_112712013300020001SoilGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTFRPMK
Ga0193730_109099713300020002SoilPPSRPAPTRIVTTRSTGVVLSVDPRARMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTFRPMK
Ga0193717_119199613300020060SoilRVQLAPDARVAVSERDAQAEEPSHSFKDTPISLSDIGRGDYVIVERRGPPGKEQAHSIVVTFRNR
Ga0210403_1067851913300020580SoilVNPRARTLVLQDLGAAAEGWRRRVELAPDARVVLSERDDRAEDFSHPFKDTAISLSDVRAGDFVVVETRGPEGKALARSVVVTFRGSQGSGRAAQPMK
Ga0210378_1007526833300021073Groundwater SedimentLSGVVLSVDPRARVLVFEDRGTAAAERLRVELAPDARVALSERDPNAEDPSHPFKDTVISLSDVARGDYVVVEMRGPEGKELARSVVVTFRRK
Ga0210408_1000531113300021178SoilVRVVTTRSSGLVLSVNPRARTLLLEDRGAAAAASGLRVELAPDARVVLSERDDRGEDLSHPFKDTLISLSDVRRGDFVVVEMRGPEGNALARSVVVTFRGHEGVGGPAPRVK
Ga0210384_1009660753300021432SoilVLSVNPRARTLLLEDRGAAAAASGLRVELAPDARVVLSERDDRGEDLSHPFKDTLISLSDVRRGDFVVVEMRGPEGNALARSVVVTFRGHEGVGGPAPRVK
Ga0210409_1150718113300021559SoilRCRHRARPRVRVVTTRSSGLVLSVNPRARTLLLEDRGAAAAASGLRVELAPDARVVLSERDDRGEDLSHPFKDTLISLSDVRRGDFVVVEMRGPEGNALARSVVVTFRGHEGVGGPAPRV
Ga0224452_125892013300022534Groundwater SedimentMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTF
Ga0207684_10001286113300025910Corn, Switchgrass And Miscanthus RhizosphereMGAGAQVSRLRVELANDARVVLSERHDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPEGTAVARSVVVTFRAK
Ga0207684_1065905513300025910Corn, Switchgrass And Miscanthus RhizosphereLPSPPPARVISTRASGRVLSVDPGAGALVLEDMGAGAQVSRLRVELAPDARVVLSERDDRANDLSHPFKDTAISLSDVRKGDFVVVEMRGPEGKSRARSVVVTWRPPPSG
Ga0207686_1059998223300025934Miscanthus RhizosphereRVPAPIISTRSSGVVLSVDPRARQLVLEDRGAAGEAARLRIELAPDARVLLSEREDQPADPSRPFKDTTIDLSDVRRGDYVVVERRGPEGKALARSVVVTFRANK
Ga0207648_1189598013300026089Miscanthus RhizosphereRGAAGEAARLRIELAPDARVLLSEREDQPADPSRPFKDTTIDLSDVRRGDYVVVERRGPEGKALARSVVVTFRANK
Ga0207675_10070385513300026118Switchgrass RhizosphereQLVLEDRGAAGEAARLRIELAPDARVLLSEREDQPADPSRPFKDTTIDLSDVRRGDYVVVERRGPEGKALARSVVVTFRANK
Ga0257148_102385313300026345SoilVGPVPLPSRPPARVTSTRASGRVLSVDPGARTLLLEDMGAGAQVSRLRVELAPDARVVLSERDDRAEDLSHPFKETVISLSDVRKGDFAVVEMRGPQGTAVARSVVVTFRAK
Ga0257179_100402823300026371SoilGAAGRLRVELAPDARVVLSERDDRAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK
Ga0257177_102412823300026480SoilAPPLPPSRAAPVRVVSTRSSGVVLSVDPRASMLVLEDRGAAGAAGRLRVELAPDARVVLSERDDRAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVVVTFRPK
Ga0208997_101922823300027181Forest SoilMLVLEDRGAAGDAGRLRIELAPDARVVLSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPTK
Ga0209814_1019117133300027873Populus RhizosphereIVTTRSTGVVLSVDPRARMLVLEDRGAAGDAGRLHIELAPDARVALSERNDQVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPMK
Ga0307293_1005955123300028711SoilMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVVVTFRPVK
Ga0307301_1026719123300028719SoilMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTFR
Ga0307282_1062575713300028784SoilPPSRPAPTRIVTTRSTGVVLSVDPRARMLVLEDRGAAGDTGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELARSVLVTFRPTK
Ga0307504_1036037913300028792SoilNTPESAPQKERPFTPASTGDTQSTPGRPVPSSTPPPGRVVTTRSSGIVLAVNPGARTLVLQDMGAAEKAGRLRVELAPDARVVRSERYHPFKDTVIGLSDVRKGDFVVVEMRGPEGTAVARSVVVTFRGP
Ga0307302_1070215623300028814SoilMLVLEDRGAAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVV
Ga0307312_1061985813300028828SoilFEDRGTAAAERLRVELAPDARVALSERDANAEDPSHPFKDTVISLSDVARGDYVVVEMRGPEGKELARSVVVTFRPK
Ga0299907_1050080143300030006SoilIVSMRSSGVVLSVDPGASMLVLDERGAGGEARRLRIELAPEARVVLSERADRAEDVSRLFKDTPIDLSDIRTGDYVVVERRGPEGKELAQSVVVTFRPMK
Ga0268386_1015003113300030619SoilMRSSGVVLAVDPGASMLVLDERGVGGEARRLRIELAPEARVVLSERAERAEDVSRLFKDTPIDLSDIRTGDYVVVERRGPEGKELAQSVVVTFRPMK
(restricted) Ga0255312_106844223300031248Sandy SoilAGMLVVEDTGGAGEAGRLRVELAPDARVVLSERNDQAEDLSRPFKDTVISLSDVRRGDYVVVERRGPEGKELAHSVVVTFRPMK
Ga0307469_1032149533300031720Hardwood Forest SoilEDTRPLAPASKAETGSLGGRPQPPSRPPPVRVVTTRSSGIVLSVNPRARTLVLEDRDAAAAASQLRVELAPDARVVLSERDDRAQDLSHPFKDTLISLSDVRRGDFVVVEMRGPEGKALARSVVVTFRGNQGAGGPAQPVK
Ga0307469_1073558113300031720Hardwood Forest SoilVGPIPQPSRPLARVISTRASGRVLSVDPSARTLVLEDMGAGAQVARLRVGLAPDARVVLSERDDRAEDLSHPFKETVISLSDVRKGDFVVLEMRGPEGKARARSVVVTWRPPPSG
Ga0307468_10012535733300031740Hardwood Forest SoilMLVLEDRGAGDAGRLRIELAPDARVALSERNDRVEDLSRPFKDTAIDLSDVRRGDYVVVIRQGPEGKELGRSVVVTFRPLK
Ga0307473_1110982213300031820Hardwood Forest SoilSGIVLSVNPRARTLVLQDLGAAAEGWRRRVELAPDARVVLSERDDRAEDFSHPFKDTAISLSDVRAGDFVVVETRGPEGKALARSVVVTFRGSQGSGRTAQPMK
Ga0307471_100000250253300032180Hardwood Forest SoilMGAGAQVARLRVGLAPDARVVLSERDDRAEDLSHPFKETVISLSDVRKGDFVVLEMRGPEGKARARSVVVTWRPPPSG
Ga0307471_10031356743300032180Hardwood Forest SoilLEDMGAGAKVSRLRVELANDARVVLSERHDRAEDLSHPFKETVISLSDVRQGDFAVVEMRGPEGTTVARSVVVTFRAK
Ga0307471_10104042513300032180Hardwood Forest SoilMPPSSPPPVRVVTTRSSGIVLSVNPRARTLVLQDLGAAAEGWRRRVELAPDARVVLSERDDRAEDFSHPFKDTAISLSDVRAGDFVVVETRGPEGKALARSVVVTFRGSQGSGRAAQPMK
Ga0310810_1127368113300033412SoilAAAAASRLRVELAPDARVVLSERDNRAEDLSHPFKDTLISLSEVRRGDFVVVEMRGPEGKALARSVVVTFRSHEGADEPAPLVK
Ga0326730_100279543300033500Peat SoilVASSKPPPGRVVTTRSSGIVLAVNPGARTLVLQDMGAVAEAGRVLVELAPDARVVLSERDDRAEDVSHPFKDTVISLSDVRKGDFVVVEMRGPEGTAVARSVVVTFRGP
Ga0326732_102129823300033501Peat SoilRPLTPASTADTHSTPGRPVPSTKPPPGRVVTTRSSGIVLAVNPGARTLVLQDMGAAAEAGRVLVELAPDARVVLSERDDRAEDVSHPFKDTVISLSDVRKGDFVVVEMRGPEGTAVARSVVVTFRGP
Ga0364928_0159397_3_2273300033813SedimentMLVLEDRGAAGEAGRLRVELAPDARVVLSERDDQAEDPSHPFKDTVISLSDVGRGDYVVVEMRGPEGKELARSVV
Ga0326723_0280227_318_5903300034090Peat SoilVLGVNPGARTLVLQDMGAAAEAGRLLVELAPDARVVLSERDDRAGDLSHPFKDTVISLSDVRKGDFVVVEMRGPEGTAVARSVVVTFRGP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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