Metagenome Family F096811

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096811
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	53 residues
Representative Sequence	PEFAAEAKKLLDWDGATYLSGEQLQKKIEATVTQPPDVIKRVKEVLEES
Number of Associated Samples	97
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.77 %
% of genes near scaffold ends (potentially truncated)	82.69 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.577 % of family members)
Environment Ontology (ENVO)	Unclassified (36.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (33.654 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.96% β-sheet: 2.60% Coil/Unstructured: 58.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF09587	PGA_cap	21.15
PF03401	TctC	7.69
PF00890	FAD_binding_2	6.73
PF03972	MmgE_PrpD	4.81
PF09084	NMT1	3.85
PF05016	ParE_toxin	1.92
PF00507	Oxidored_q4	1.92
PF00296	Bac_luciferase	1.92
PF01797	Y1_Tnp	0.96
PF13378	MR_MLE_C	0.96
PF13343	SBP_bac_6	0.96
PF00346	Complex1_49kDa	0.96
PF07927	HicA_toxin	0.96
PF13531	SBP_bac_11	0.96
PF13416	SBP_bac_8	0.96
PF01936	NYN	0.96
PF02661	Fic	0.96
PF00378	ECH_1	0.96
PF10531	SLBB	0.96
PF00596	Aldolase_II	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	7.69
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	4.81
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	3.85
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	3.85
COG0838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	Energy production and conversion [C]	1.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.92
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.96
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.96
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.96
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.96
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.15 %
Unclassified	root	N/A	3.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.31 %
Unclassified	root	N/A	3.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	64.42 %
Unclassified	root	N/A	3.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	64.42 %
Unclassified	root	N/A	3.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	64.42 %
Unclassified	root	N/A	3.85 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.96 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	64.42 %
Unclassified	root	N/A	3.85 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	64.42 %
Unclassified	root	N/A	3.85 %
Virgisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium	0.96 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	64.42 %
Unclassified	root	N/A	3.85 %
Virgisporangium aurantiacum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aurantiacum	0.96 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002124\|C687J26631_10021765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2277	Open in IMG/M
3300002223\|C687J26845_10273132	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300003890\|Ga0063162_1004986	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300004009\|Ga0055437_10258097	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300004011\|Ga0055460_10283184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300004013\|Ga0055465_10348022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300004780\|Ga0062378_10099587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300005166\|Ga0066674_10356294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300005213\|Ga0068998_10060712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	769	Open in IMG/M
3300005295\|Ga0065707_10799177	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005328\|Ga0070676_11357410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300005340\|Ga0070689_100301874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1333	Open in IMG/M
3300005540\|Ga0066697_10303228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300005545\|Ga0070695_101604988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300005615\|Ga0070702_100855241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300005844\|Ga0068862_100435486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1233	Open in IMG/M
3300006845\|Ga0075421_101784912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300006847\|Ga0075431_101188580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300006847\|Ga0075431_102021694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300006853\|Ga0075420_101211312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300006894\|Ga0079215_10053127	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300007255\|Ga0099791_10458941	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009012\|Ga0066710_100538324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1765	Open in IMG/M
3300009053\|Ga0105095_10832078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300009078\|Ga0105106_11171761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300009153\|Ga0105094_10130803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1425	Open in IMG/M
3300009174\|Ga0105241_12110102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300009176\|Ga0105242_12483711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300009610\|Ga0105340_1049353	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1642	Open in IMG/M
3300009678\|Ga0105252_10428869	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300009792\|Ga0126374_11061835	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010043\|Ga0126380_11576575	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300010046\|Ga0126384_12100116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300010359\|Ga0126376_11059274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	816	Open in IMG/M
3300010360\|Ga0126372_11445730	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300010366\|Ga0126379_10686040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1117	Open in IMG/M
3300010376\|Ga0126381_103261682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300010399\|Ga0134127_10223843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1764	Open in IMG/M
3300010399\|Ga0134127_12651807	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010401\|Ga0134121_10960996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300010403\|Ga0134123_11546414	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	709	Open in IMG/M
3300010403\|Ga0134123_12989539	Not Available	542	Open in IMG/M
3300012034\|Ga0137453_1063507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300012199\|Ga0137383_11341104	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012202\|Ga0137363_10136767	All Organisms → cellular organisms → Bacteria → Nitrospirae	1911	Open in IMG/M
3300012231\|Ga0137465_1135849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	742	Open in IMG/M
3300012232\|Ga0137435_1077210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	991	Open in IMG/M
3300012582\|Ga0137358_10153876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1566	Open in IMG/M
3300012922\|Ga0137394_11591227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300012930\|Ga0137407_10064858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aurantiacum	3019	Open in IMG/M
3300014255\|Ga0075320_1018707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1113	Open in IMG/M
3300014864\|Ga0180068_1060450	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300014872\|Ga0180087_1096891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300014880\|Ga0180082_1160906	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300014883\|Ga0180086_1008900	All Organisms → cellular organisms → Bacteria → Proteobacteria	2087	Open in IMG/M
3300015254\|Ga0180089_1093399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300016371\|Ga0182034_11483875	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300016387\|Ga0182040_11131833	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300018000\|Ga0184604_10024247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1477	Open in IMG/M
3300018028\|Ga0184608_10118930	Not Available	1119	Open in IMG/M
3300018052\|Ga0184638_1326135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300018053\|Ga0184626_10049498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1758	Open in IMG/M
3300018063\|Ga0184637_10343499	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300018073\|Ga0184624_10146406	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300018075\|Ga0184632_10034100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2179	Open in IMG/M
3300018079\|Ga0184627_10224802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	990	Open in IMG/M
3300018422\|Ga0190265_10052148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3575	Open in IMG/M
3300018429\|Ga0190272_11314643	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300018429\|Ga0190272_12397327	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300018432\|Ga0190275_10010279	All Organisms → cellular organisms → Bacteria	6902	Open in IMG/M
3300018466\|Ga0190268_10207972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1076	Open in IMG/M
3300018469\|Ga0190270_10020136	All Organisms → cellular organisms → Bacteria → Proteobacteria	4093	Open in IMG/M
3300018481\|Ga0190271_12845268	Not Available	581	Open in IMG/M
3300019789\|Ga0137408_1400605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1267	Open in IMG/M
3300019881\|Ga0193707_1108617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	820	Open in IMG/M
3300019889\|Ga0193743_1016601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3928	Open in IMG/M
3300020034\|Ga0193753_10286179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300020060\|Ga0193717_1030262	All Organisms → cellular organisms → Bacteria	2126	Open in IMG/M
3300020197\|Ga0194128_10092931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1906	Open in IMG/M
3300020200\|Ga0194121_10564843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300022756\|Ga0222622_10835897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300025146\|Ga0209322_10124887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1161	Open in IMG/M
3300025155\|Ga0209320_10085311	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300025159\|Ga0209619_10040684	All Organisms → cellular organisms → Bacteria	2959	Open in IMG/M
3300025160\|Ga0209109_10039205	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300025167\|Ga0209642_10058143	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300025167\|Ga0209642_10265023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	982	Open in IMG/M
3300025318\|Ga0209519_10545390	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300025324\|Ga0209640_10097463	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300025324\|Ga0209640_10229780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1569	Open in IMG/M
3300025327\|Ga0209751_10410637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1122	Open in IMG/M
3300025560\|Ga0210108_1059163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300025780\|Ga0210100_1072461	Not Available	508	Open in IMG/M
3300025936\|Ga0207670_10558448	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300027462\|Ga0210000_1009616	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300027722\|Ga0209819_10099243	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300027909\|Ga0209382_10908589	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300027909\|Ga0209382_11194104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	779	Open in IMG/M
3300032075\|Ga0310890_11680553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300032180\|Ga0307471_100039716	All Organisms → cellular organisms → Bacteria	3753	Open in IMG/M
3300033407\|Ga0214472_10295737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1541	Open in IMG/M
3300034147\|Ga0364925_0256227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300034150\|Ga0364933_129943	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300034151\|Ga0364935_0227722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.42%
Host-Associated	Host-Associated	10.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.69%
Aquatic	Environmental → Aquatic	31.73%
Plants	Host-Associated → Plants	10.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.81%
Sediment	Environmental → Aquatic → Sediment	18.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.65%
Freshwater	Environmental → Aquatic → Freshwater	6.73%
Marine	Environmental → Aquatic → Marine	5.77%
Floodplain	Environmental → Terrestrial → Floodplain	2.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.27%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.88%
Lake	Environmental → Aquatic → Freshwater → Lake	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.88%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.58%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	9.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	6.73%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.88%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.92%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.96%
Hot Spring Sediments	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300002223	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_1.2	Environmental	Open in IMG/M
3300003890	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004011	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025780	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26631_100217652	3300002124	Soil	LQALRESFERMLKDPEFAAEAKKLLDWDGMTFLSGEQLQRKFEANVIQPPDVIKRVKEVLEKS*
C687J26845_102731322	3300002223	Soil	ESFERMLKDPEFAAEAKKLLDWDGMTFLSGEQLQRKFEANVIQPPDVIKRVKEVLEKS*
Ga0063162_10049861	3300003890	Hot Spring Sediments	ESFARMLKDSDFAAEAKKFLDWDGVTSLSGAELEKKMIDTITQPPGLIKRIKDVLAES*
Ga0055437_102580971	3300004009	Natural And Restored Wetlands	RMLKDPEFGAHAKKLLDWDGETFMNGDKLQKKIDATVTQPPSVIKLVKEVLAEP*
Ga0055460_102831842	3300004011	Natural And Restored Wetlands	ILRDSFERMLKDPEFGAHAKKLLDWDGETFMNGDKLQKKIDATVTQPPSVIKLVKEVLAEP*
Ga0055465_103480222	3300004013	Natural And Restored Wetlands	DRAQILRDSFTKMLKDAEFTAEARKLLDWDGSSHMTGEQLQRKIAETMNQPADVIKRIKEILTQQ*
Ga0062378_100995871	3300004780	Wetland Sediment	SFERMLKDSEFSAEAKKLLDWDGTTFLSGEQLQKKIIATVSQPPDVIKRVKEIMSE*
Ga0066674_103562942	3300005166	Soil	EAKKLLDWNGTTYLSGEDLRRKIDATVSQPPDVIRRVQEVLAES*
Ga0068998_100607121	3300005213	Natural And Restored Wetlands	PEFGAEAKKQLDWDGNTFLTGDQMRQKIEATVTQPPEVIKRIKEVLAEE*
Ga0065707_107991772	3300005295	Switchgrass Rhizosphere	ERLQILRESFERMLKDTEFAAEAKKLLDWDGTTYLSGDQLQKKIDATVNQPPEVIKRVKEILEES*
Ga0070676_113574102	3300005328	Miscanthus Rhizosphere	MRWLVGHFIAEAKKLTDWDGRWFLTGEQLQKKMETTINQPPDVIKRIKEFLEES*
Ga0070689_1003018743	3300005340	Switchgrass Rhizosphere	MRWLVGHFIAEAKKLTDWHGRWFLTGEQLQKKMETTINQPPDVIKRIKEFLEES*
Ga0066697_103032282	3300005540	Soil	LLDWNGTTYLSGEDLRRKIDATVSQPPDVIQRVKEILAES*
Ga0070695_1016049882	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AEAKKLTDWDGRWFLTGEQLQKKMETTISQPLDVIKRIKEILEES*
Ga0070702_1008552412	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	KLLDWDGATYLSGEQLQRKMIVTITQPPEVIKRVKEILAES*
Ga0068862_1004354862	3300005844	Switchgrass Rhizosphere	AEAKKLTDWDGRWFLTGEQLQKKMETTINQPPDVIKRIKEFLEES*
Ga0075421_1017849122	3300006845	Populus Rhizosphere	PEFVAEAKKQLDWDGNTFLTGEQMRQKIEATVTQPADVIKRIKEVLAEE*
Ga0075431_1011885801	3300006847	Populus Rhizosphere	ESFERMLKDAEFAAEAKKLVDWDGATYLSGEQLQKKMIATVTQPPEVIKRVKEILAE*
Ga0075431_1020216942	3300006847	Populus Rhizosphere	ERMLKDGEFVAEAKKLLDWDGATYLSGEQLQKKMISTITQPPEVIKRIKEILAES*
Ga0075420_1012113122	3300006853	Populus Rhizosphere	AAPPGVAQERLQILRDSFQRIWQDAEFAAEAKKLTDWDGRWHLTGEQLQKKMETTISQPPDVIKRIKEILEES*
Ga0079215_100531271	3300006894	Agricultural Soil	PEFTADAKKLLDWDGATYLSGEQLQKKMIDTITQPPEVIKRVKEILAES*
Ga0099791_104589412	3300007255	Vadose Zone Soil	EAKKLLDWDGTTYLSGEQLQKKIDATITQPPEVIKRVKEILEES*
Ga0066710_1005383241	3300009012	Grasslands Soil	AGVAAEAKKLLEWNGTTYRSGEELRRKIDGTVSQPPDVIERVKEILAEA
Ga0105095_108320781	3300009053	Freshwater Sediment	KKLLDWDGTTFLSGDQLQQKIIATVTQPADVVKRVKEIMAE*
Ga0105106_111717611	3300009078	Freshwater Sediment	AADAKKLLDWDGATSLSGEQLQKKLIDTVTQPPEVLKLVKEILAES*
Ga0105094_101308032	3300009153	Freshwater Sediment	ESKKLLEGDGTTFLSGDQLQKKIIATVTQPADVVKQVKEIMAE*
Ga0105241_121101022	3300009174	Corn Rhizosphere	MPKERLQILSESFERMLRDAEFAAEAKKLLDWDGATYLSGEQLQRKMIVTITQPPEVIKRVKEILAES*
Ga0105242_124837111	3300009176	Miscanthus Rhizosphere	MRWLVGHFIAEAKKLTDWHGRWFLTGEQLQKKMETTINQPPDVIKRIKEILEES*
Ga0105340_10493531	3300009610	Soil	ERLQILRESFERMLKDAEFAAEAKKLVDWDGATYLSGEQLQKKMIATVTQPPEVIKRVKEILAE*
Ga0105252_104288692	3300009678	Soil	FERMLKDAEFAAEAKKLLDWDGTTYLSGEQLQKKIEATVTQPPDVIKQVKEVLAES*
Ga0126374_110618352	3300009792	Tropical Forest Soil	ERLQILRESFERMLKDAEFAAEAKKLLDWDGTTYLSGAQLQKKIDATVTQPTEVIKRVKEILEES*
Ga0126380_115765751	3300010043	Tropical Forest Soil	SFEIMLKDAEFAAEAKKLLDWDRTTYLSGAQLQKKIDATVTQPTEVIKRVKEILEES*
Ga0126384_121001162	3300010046	Tropical Forest Soil	QILRESFERMLKDGEFAAEAKKLLDWDGTTYLSGEQLQKKIEATVTQPPDVTKRVKEILKES*
Ga0126376_110592741	3300010359	Tropical Forest Soil	KERLQILRESFEKMLKDPEFAAEAKKLLDWDGTTYLSGEQLQKKIEATVTQPPDVTKRVKEILEES*
Ga0126372_114457301	3300010360	Tropical Forest Soil	AAEAKKLLDWDGTTYLSGEQLQKKIEATVTQPPDVTKRVKEILEES*
Ga0126379_106860402	3300010366	Tropical Forest Soil	RLQILRESFEKMLKDPEFAAEAKKLLDWDGTTYLSGEQLQKKIEATVTQPPDVTKRVKEILEES*
Ga0126381_1032616821	3300010376	Tropical Forest Soil	EFAAEAKKLLDWDGTTYLSGEQLQKKIEATVTQPPDVTKRVKEILEES*
Ga0134127_102238432	3300010399	Terrestrial Soil	AAPPGVAQERLQILRDSFQRIWQDAEFAAEAKKLTDWDGRWYLTGEQLQKKMEIIISQPSDVIKRIKEILEES*
Ga0134127_126518072	3300010399	Terrestrial Soil	MRWLVGHFIAEAKKLTDWDGRWFLTGEQLQKKMETTINQPPDVIKRIQEFLEES*
Ga0134121_109609962	3300010401	Terrestrial Soil	MRWLVGHFIAEAKKLTDWDGRWFLTGEQLQKKMETINQPPDVIKRIKEFLEES*
Ga0134123_115464142	3300010403	Terrestrial Soil	RVQILRNGFESMLKDAEFAAEAKKLLDWDGRTYLSGEQLQKKLIDTVTQPPEIIKRIKEILSES*
Ga0134123_129895391	3300010403	Terrestrial Soil	QGSGVRAEGKEQLDWDGTAFLNGEQLQKKIDVTVTQPPDVIKRIVLEES*
Ga0137453_10635072	3300012034	Soil	AEAKKQLDWDGNTFLTGEQMRQKIEATVTQPPDVIKRIKEVLEES*
Ga0137383_113411041	3300012199	Vadose Zone Soil	KDAEFAAEAKKLLDWDGTTFLSGEHLQKKIDATVTQPPEVIKRVKEILEES*
Ga0137363_101367672	3300012202	Vadose Zone Soil	LLDWDGTTYLSGEQLQKKIDATVTQPPDVIKRVKEILEES*
Ga0137465_11358491	3300012231	Soil	PGVAQERLQILRDSFQRIWQDAEFAAEAKKLTDWDGRWHLTGEQLQKKMETTISQPPDVIKRIKEILEES*
Ga0137435_10772101	3300012232	Soil	AEAKKLTDWDGRWYLSGEQLQKKMEATITQPPDVIKRIREILEES*
Ga0137358_101538761	3300012582	Vadose Zone Soil	DAGFAAEAKKLLDWNGTTYLSGEDLRRKIDATVSQPPDVIRRVQEVLAES*
Ga0137394_115912271	3300012922	Vadose Zone Soil	FERMLKDAGFAAEAKKLLDWNGTTYLSGEDLRRKIDATVSQPPDVIRRVQEVLAES*
Ga0137407_100648583	3300012930	Vadose Zone Soil	LQILRESFERMLKDTEFAAEAKKLLDWDGTTFLSGEQLQKKIDATVSQPPEVIKRVKDILEES*
Ga0075320_10187072	3300014255	Natural And Restored Wetlands	LKMLKDSEFSAEARKLLDWDGGSHFSGEQLQKKIDLTMNQPPEVIKRIKEILTEP*
Ga0180068_10604502	3300014864	Soil	FSAEAKKLVDWDGAAFLTGEQLQKKIEVTVTQPPDVIKRIKEILEET*
Ga0180087_10968912	3300014872	Soil	MLRDGFQKMLKDADFAAEAKKLIDWDGISHLTGEQLQKRIAETVTQPPDMIKRIKQILEE
Ga0180082_11609061	3300014880	Soil	KKLLDWDGTTYLSGEQLQKKIEATVTQPPDVIKQVKEILAES*
Ga0180086_10089001	3300014883	Soil	KMLKDREFVAEGKNLLDWDGVSHLDGEQLQKKIEATMNQPPDVIKRIREILTES*
Ga0180089_10933991	3300015254	Soil	NLLDWDGISHLDGEQLQKKIEATMNQPPDVIKRIREILTEP*
Ga0182034_114838751	3300016371	Soil	EAKKLLDWDGTTYLSGEQLQKKIDATVTQPPDVIRRVKEILEES
Ga0182040_111318331	3300016387	Soil	MPRLQACQRSDYKILRESFERVLKDPEFAAEAKNLLDWDGPTYLSGEQLQKKIDATVTQPPDVIKRVKEILEES
Ga0184604_100242472	3300018000	Groundwater Sediment	MSVWQDPEFAAEAKKLTDWDGRWFLTGEQLQKKMETTINQPPDVIKRIKEFLEESLGS
Ga0184608_101189302	3300018028	Groundwater Sediment	DTEFAGDAKKLLDWDGTTYLSGEQLQKKIDATVTQPPEVIKRVKEILEES
Ga0184638_13261351	3300018052	Groundwater Sediment	MLKDPEFGAEAKKQLDWDGATFLSGEDLRKKIEATVTQPPEVIKRVKEVLAES
Ga0184626_100494983	3300018053	Groundwater Sediment	EFAAEAKKLTDWDGRWYLSGEQLQKKFETTITQPPDVIKRIREILAES
Ga0184637_103434992	3300018063	Groundwater Sediment	AEFAAEAKNLLDWDGISHYSGEQLQKKIEATMNQPPDVIKRIKEILAES
Ga0184624_101464061	3300018073	Groundwater Sediment	DTEFAAEAKKLLDWDGTTYLSGEQLQKKIDATVAQPPDVIKRVKEILEES
Ga0184632_100341001	3300018075	Groundwater Sediment	ESFERMLKDSDFAAEAKKLLDWDGATYLSGEQLQKKLIATITQPAEVVKRVKEIMAE
Ga0184627_102248022	3300018079	Groundwater Sediment	FERMLKDAEFTAEAKKLLDWDGRTYLTGEQLQKKIIATVTQPPEVIQRVKEILAESG
Ga0190265_100521485	3300018422	Soil	MSVWQDPEFATEAKKLTDWDGRWFLTGKQLQKKMETTINQPPDVIKRIKEFLEES
Ga0190272_113146431	3300018429	Soil	EFAAEAKKLLDWDGTTFMRGDQLQQKIIAVVSQPADVVKRVKEIMAE
Ga0190272_123973272	3300018429	Soil	LKILRESFVRVWRDPEFAAEAKKLTDWDGSWHLTGDQLQKKIDAAINQPLDVIKRIKEILAE
Ga0190275_100102791	3300018432	Soil	LDWDGTTFMSGDQLQKKIIAVVSQPADVVKRVKDIMAE
Ga0190268_102079722	3300018466	Soil	LVDWDGATYLSGEQLQKKLIATVTQPPEVIKRVKEILAE
Ga0190270_100201366	3300018469	Soil	TDWDGRWHLTGEQLQKKMETTISQPPDVIKRIKEILEES
Ga0190271_128452681	3300018481	Soil	AEAKKLLDWDGATYLSGEQLQKKMVVTITQPPEVIKRVKEILAES
Ga0137408_14006051	3300019789	Vadose Zone Soil	LQILRESFERMLKDTEFAAEAKKLLDWDGTTFLSGEQLQKKIDATVSQPPEVIKRVKDILEES
Ga0193707_11086172	3300019881	Soil	MRWLVGHFIAEAKKLTDWDGRWFLTGEQLQKKMETTINQPPDVIKRIKEFLEES
Ga0193743_10166012	3300019889	Soil	MSVWQDPEFAAEAKKLTDWDGHWFLTGEQLQKKMETTINQPPDVIKRIKEFLEES
Ga0193753_102861791	3300020034	Soil	NLLSSWKTLNVCWHDPEFAAEAKKLTDWDGRWFLTGEQLQKKMETTINQPPDVIKRIKEFLEES
Ga0193717_10302621	3300020060	Soil	RMLRDAEFAAEAKKLLDWDGATYLSGEQLQKKMIATITQPPDVIKRVKEILAES
Ga0194128_100929312	3300020197	Freshwater Lake	KDAEFVAEAKKQLDWDGGTFLTGEQMRQKLEVTITQPPEVIKRVKEVLAEE
Ga0194121_105648431	3300020200	Freshwater Lake	PGLPPERLQILRESLLRVWRDAEFAAEAKKLTDWDGSWHLTGAELQKRHEAALNQPADVVRRIKEILQES
Ga0222622_108358971	3300022756	Groundwater Sediment	KLTDWDGRWFLTGEQLQKKMETTINQPPDVIKRIKEFLEES
Ga0209322_101248872	3300025146	Soil	MLKDPEFAAEAKKLLDWDGMTFLSGEQLQRKFEANVIQPPDVIKRVKEVLEKS
Ga0209320_100853111	3300025155	Soil	PEFAAEAKKQLDWDGATFLSGEDLRRKIEATVNQPPDVIKRVKEVLEES
Ga0209619_100406844	3300025159	Soil	MLKDPEFAAEAKKLLDWDGMTFLSGDQLQKKIEETVTQPPDVIKRVKEVLEES
Ga0209109_100392055	3300025160	Soil	FERMLKDPEFAAEAKKLLDWDGMTFLSGEQLQKRIEATVTQPPDVIKRVKEVLEES
Ga0209642_100581433	3300025167	Soil	LRESFERMLKDPEFAAEAKKLLDWDGMTFLSGEQLQRKFEANVIQPPDVIKRVKEVLEKS
Ga0209642_102650232	3300025167	Soil	LILRNSFESTLHDAKFSEEAKKHFDWDGSYLTGEQLQRKIEQIVTQPPDVIKRVKEILQ
Ga0209519_105453901	3300025318	Soil	KERLQILRESFERMLKDPEFAAEAKKLLDWDGATYLSGEQLQKKIEATVTQPPDVIKRVKEVLEES
Ga0209640_100974636	3300025324	Soil	PEFAAEAKKLLDWDGATYLSGEQLQKKIEATVTQPPDVIKRVKEVLEES
Ga0209640_102297802	3300025324	Soil	AKFSEEAKKHFDWDGSYLSGEKLQRKIDQIVTQPPDVIKRVKEILE
Ga0209751_104106372	3300025327	Soil	MLKAPEFAAEAKKLLDWDGMTFLSGEQLQRKIEATVTQPPDVIKRIKEVLEES
Ga0210108_10591631	3300025560	Natural And Restored Wetlands	AKKQLDWDGNTFLTGEQMRQKIEATVTQPPEVIKRVKEVLAEE
Ga0210100_10724611	3300025780	Natural And Restored Wetlands	LKDTDFAAEAKKLLDWDGKTYLSGEQLQKKLIDTVTQPPEILKRVKEILDAAE
Ga0207670_105584482	3300025936	Switchgrass Rhizosphere	LDWDGATYLSGEQLQRKMIVTITQPPEVIKRVKEILAES
Ga0210000_10096161	3300027462	Arabidopsis Thaliana Rhizosphere	SFARMLNDPEFAAEAKKLLDWDGKTYLGGEQLQKKLIDTVSQPPEVLKRVKEILDAAE
Ga0209819_100992432	3300027722	Freshwater Sediment	RMLKDTEFAAEAKKLLDWDGTTYLSGEQLQKKIDATVTQPPGIIKRVKEVLEES
Ga0209382_109085892	3300027909	Populus Rhizosphere	ESFERMLKDTEFAAEAKKLLDWDGTTFLTGEQLQKKLEATVSQPPEVIKRVKEILEES
Ga0209382_111941042	3300027909	Populus Rhizosphere	VDWDGATYLSGEQLQKKMIATVTQPPEVIKRVKEILAE
Ga0310890_116805531	3300032075	Soil	EFTAEAKKLLDWDGTTFLSGDQLQKRMIDTVTQPADVVKRVKEIMAE
Ga0307471_1000397161	3300032180	Hardwood Forest Soil	KERLQILRESFERVLKDPEFAAEAKKLLDWDGTTYLSGEQLQKKIDATVTQPPDVIKRVKEILEES
Ga0214472_102957373	3300033407	Soil	AGKLLDWDGGSHFSGEQLQKKIETTMNQPPEVIKRIKEILTES
Ga0364925_0256227_496_651	3300034147	Sediment	RDAEFAAEAKKLLDWDGATYLSGEQLQKKMVVTITQPPEVIKRVKEILAES
Ga0364933_129943_1_141	3300034150	Sediment	FAAEAKKLLDWDGTTFMSGDQLQKKIIATVTQPADVVKRVKEIMAE
Ga0364935_0227722_405_602	3300034151	Sediment	ERLQILRESFERMLRDAEFAAEAKKLLDWDGATYLSGEQLQKKMVVTITQPPEVIKRVKEILAES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096811

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences