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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F096793 |
| Family Type | Metagenome |
| Number of Sequences | 104 |
| Average Sequence Length | 147 residues |
| Representative Sequence | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPIHL |
| Number of Associated Samples | 98 |
| Number of Associated Scaffolds | 104 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 4.85 % |
| % of genes near scaffold ends (potentially truncated) | 96.15 % |
| % of genes from short scaffolds (< 2000 bps) | 91.35 % |
| Associated GOLD sequencing projects | 89 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.74 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (83.654 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.385 % of family members) |
| Environment Ontology (ENVO) | Unclassified (41.346 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (57.692 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 17.14% β-sheet: 27.43% Coil/Unstructured: 55.43% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.74 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| c.52.1.7: Cfr10I/Bse634I | d1knva_ | 1knv | 0.53018 |
| c.52.1.27: Hypothetical protein TT1808 (TTHA1514) | d1wdja_ | 1wdj | 0.51442 |
| c.52.1.26: Hypothetical protein VC1899 | d1xmxa1 | 1xmx | 0.51416 |
| c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | d1p1ja1 | 1p1j | 0.50559 |
| c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | d3qvsa1 | 3qvs | 0.5009 |
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| Pfam ID | Name | % Frequency in 104 Family Scaffolds |
|---|---|---|
| PF02518 | HATPase_c | 10.58 |
| PF05375 | Pacifastin_I | 3.85 |
| PF08448 | PAS_4 | 1.92 |
| PF00486 | Trans_reg_C | 0.96 |
| PF08757 | CotH | 0.96 |
| PF04542 | Sigma70_r2 | 0.96 |
| PF14791 | DNA_pol_B_thumb | 0.96 |
| COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
|---|---|---|---|
| COG0568 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | Transcription [K] | 0.96 |
| COG1191 | DNA-directed RNA polymerase specialized sigma subunit | Transcription [K] | 0.96 |
| COG1595 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family | Transcription [K] | 0.96 |
| COG4941 | Predicted RNA polymerase sigma factor, contains C-terminal TPR domain | Transcription [K] | 0.96 |
| COG5337 | Spore coat protein CotH | Cell wall/membrane/envelope biogenesis [M] | 0.96 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 83.65 % |
| All Organisms | root | All Organisms | 16.35 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 15.38% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 7.69% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 6.73% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.77% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.81% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 4.81% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 4.81% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 3.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.88% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 2.88% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.92% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.92% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.92% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.92% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.92% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.92% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.96% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.96% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.96% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.96% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.96% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.96% |
| Prmafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.96% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.96% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.96% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.96% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.96% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300004047 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1 | Environmental | Open in IMG/M |
| 3300004081 | Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2) | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
| 3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300005993 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 | Environmental | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300006914 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011416 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2 | Environmental | Open in IMG/M |
| 3300011440 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2 | Environmental | Open in IMG/M |
| 3300012907 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1 | Environmental | Open in IMG/M |
| 3300012909 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1 | Environmental | Open in IMG/M |
| 3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
| 3300012916 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2 | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300018074 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2 | Environmental | Open in IMG/M |
| 3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
| 3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
| 3300020005 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2 | Environmental | Open in IMG/M |
| 3300020016 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1 | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300024251 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20 | Environmental | Open in IMG/M |
| 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028782 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193 | Environmental | Open in IMG/M |
| 3300030000 | I_Fen_N3 coassembly | Environmental | Open in IMG/M |
| 3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031640 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23 | Environmental | Open in IMG/M |
| 3300031679 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23 | Environmental | Open in IMG/M |
| 3300031682 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22 | Environmental | Open in IMG/M |
| 3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
| 3300032000 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3 | Environmental | Open in IMG/M |
| 3300032089 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23 | Environmental | Open in IMG/M |
| 3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
| 3300034354 | Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| Ga0055499_100524191 | 3300004047 | Natural And Restored Wetlands | MSSAKRTLRRVIQRWLAGTTEAPLLLRHCEVCGEKSWRPLSDTVKRVTIDARLPGGKRADALLTDARGEIELVIQLEGGSKLANRIEPRAGLPLVVLRAATLDDDPQRWRTLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGC |
| Ga0063454_1007009941 | 3300004081 | Soil | MSAAKRTLRRVISSWLSGDSDAPQLLRRCETCGEKCWRPLDASIKHVQVDAQLANGARADLLLTDERGGVQLVIQLDGGSRLANRVDARAGLPLVVLRGATLGADPTRWATLREFSMPAWRCRCAGTRSLSVDDDFSLRAIGCPIHLRHDGAQHFARVIED |
| Ga0062589_1011519761 | 3300004156 | Soil | MSSAKRTLRRVITEWLAGAAGAPLLLRHCEVCGEKSWRPLNDTVHGVTIDAHLPGGKRADVLLTDGRGEIELVIQLEGGSALPNRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGW |
| Ga0063356_1006243621 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSSAKRTLRRVIKDWLAGATSAPLLLRHCEVCGEKSWRPLNDTIQAVTIDAHLPGGKRADVLLTDGRGEIELVIQLEGGSALPNRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSDDGKQFYARVIEDCGRCAFFVGI |
| Ga0062594_1009925681 | 3300005093 | Soil | MSSAKLTLKRVVRGWLTGATTSPLLLRHCEVCGEKSWKPLAETIRGVTIDAKLPGGKRADAILTDARGEIELVVQLDGGSKLENRIEPRAGLPLIVLRAATFADEPNRWRALREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSEG |
| Ga0062594_1030020861 | 3300005093 | Soil | GNVPGLRRQMSSAKRTLRRVIREWLGGSAAAPLLLRHCEVCGEKSWRPLSETVRGVTIDANLPGGKRADAILTDAQGEIDLVIQLEGGSKLQNRIEPRAGMPMVVLRAATLADEPQRWRTLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGTQYYARVIEDCGRCA |
| Ga0070676_104804832 | 3300005328 | Miscanthus Rhizosphere | VIKDWLAGATSAPLLLRHCEVCGEKSWRPLNDTIQSVTIDAHLPGGKRADVLLTDGRGEIELVIQLEGGSALANRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDDGNQFYARVIEDCGRCAFFVGI |
| Ga0066388_1044244421 | 3300005332 | Tropical Forest Soil | MSSAKRTLRRVISDWLSGKTAAPLLLRHCEVCGEKAWRPLSDTVRAVSVDARLSGGKRADVVLTDAQGQIELVIQLEGGSKLENRVDPRAGLPLVVLRASSLSDEPQRLRAIREHGLPAWRCRCAGTRSLPVDDDFSLRVI |
| Ga0070680_1010297862 | 3300005336 | Corn Rhizosphere | VIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCA |
| Ga0070682_1012566811 | 3300005337 | Corn Rhizosphere | MSSAKRTLRRVIQDWLAGTSSAPLLLRHCEVCGEKSWRPLPESVEGVTIDAHLPGGKRADAILTDGQGAVQLVIQLEGGSKLQNRVESRAGLPMIVLRAATLADEPHRWRASRENGLPAWRCRCAGTRSLPVDDDFSLRVIGCPINLRSDDGH |
| Ga0070675_1015361981 | 3300005354 | Miscanthus Rhizosphere | MSSAKRTLRRVIREWLGGNAAAPLLLRHCEVCGEKSWRPLSDSVRGVTIDANLAGGKRADAILTDAQGEIELVIQLEGGSKLQNRIEPRAGMPMVVLRAATLADEPQRWRTLREHGMPAW |
| Ga0070673_1001972452 | 3300005364 | Switchgrass Rhizosphere | MSSAKRTLRRVIREWLGGNAAAPLLLRHCEVCGEKSWRPLSDSVRGVTIDANLAGGKRADAILTDAQGEIELVIQLEGGSKLQNRIEPRAGMPLVVLRAATLADEPQRWRTLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGTQY |
| Ga0070667_1005716762 | 3300005367 | Switchgrass Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSVREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGQQYYARVIEDCGRCAFFVGI |
| Ga0070713_1015673461 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | VNSWLKGGSQAPHLLRRCETCGEKSWRPLEPSITRVELDAHLPNGARADVLLTDNRGGIQLVIQLDGGSRLANRVDPRAGLPMVVLRAATLTGDPARWSTVREFCLPAWRCRCAGTRALAVDDDFSLRAIGCPIHLRHDGTQHFARVIEDCGRCAFF |
| Ga0070701_101096561 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSDDGQQFYARVIEDCGRC |
| Ga0070700_1013106191 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCP |
| Ga0070678_1005449332 | 3300005456 | Miscanthus Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPI |
| Ga0070662_1003309492 | 3300005457 | Corn Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADVILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTD |
| Ga0068867_1018406971 | 3300005459 | Miscanthus Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPIHL |
| Ga0073909_105643951 | 3300005526 | Surface Soil | LRRVIQDWLAGRSDAPLLLRHCEVCGEKAWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLKNRIEPRAGLPLVVLRAATLSDEPERWRTVREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPINLRT |
| Ga0070695_1010417271 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPINLRSDDGQQFYARVIEDC |
| Ga0068855_1008327902 | 3300005563 | Corn Rhizosphere | VIKDWLAGTTSAPLLLRHCEVCGEKSWRPLNDTIQSVTIDAHLPGGKRADVLLTDGRGEIELVIQLEGGSALANRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPVDDDFSLRVIGCPINLRTDDGAQFYARVIE |
| Ga0066706_113132121 | 3300005598 | Soil | VIRDWLVGTTVAPLVLRHCEVCGEKSWRPLADTIRGVTIDAQLPGGKRADAILTNAQGEIELVVQLEGGSKLENRIEPRAGLPLVVLRAATLADEPQRWRVLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGTQYYARVIEDCGRCAFF |
| Ga0070763_109429871 | 3300005610 | Soil | HMSAAKRTLRRVISSWLNGESEAPQLLRRCETCGEKCWRPLDDSIKHIELDARLANGARADVLLTDDNGGVQLVIQLEGGSRLANRVDPRAGLPLVVLRAVTLDADPARWASLREFGLPAWRCRCAGTRALSVDDDFSLRAIGCPIHLRHDGTQHFARVIEDCGRCAFFVG |
| Ga0070702_1003939112 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTD |
| Ga0070764_104247511 | 3300005712 | Soil | MSAAKRTLRKVIQAWLDGHGPAPQLLRHCETCGEKSWRPLEPSICRVEIDARLPNGARADVLLSDENGGLQLVIQLDGGSRLTNRVEPRSGVPLVVLRGATLSDEPARWRSLRESGLPAWRCRCAGTRALPVDDDFSLRVIGCPIHLRTDGTQYYARVIEDCGRC |
| Ga0066905_1005421601 | 3300005713 | Tropical Forest Soil | MSSAKRTLRRVIRDWLNGLSEAPLLLRHCEVCGEKSWRPLADTVRGVTIDARLPGGKRADAILTDAHGEIELVIQLEGGSKLENRIEPRAGLPLVVLRAATLSDEPQRWRTLREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGQQ |
| Ga0068861_1003601872 | 3300005719 | Switchgrass Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCAGTRSLPVDDDFSLRVMGCPIHLRTADDGQFFARVIEDCGRCAFFVGI |
| Ga0068863_1000456891 | 3300005841 | Switchgrass Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSVREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGQQYYARVIED |
| Ga0068860_1026117101 | 3300005843 | Switchgrass Rhizosphere | LSQICYFLVPCSWHGPPSRRQMSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGAIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSVREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGQQ |
| Ga0080027_100020307 | 3300005993 | Prmafrost Soil | MSAAKRTLRRVINSWLAGQGQAPAVLRRCGTCGEKSWRPLEPSIKRVEIDARLPNGTRADALCTDENGGIQLVIQLEGGSRLGNRVEPRAGLPLIVLRGETLSDQPERWRTLREFGLPSWRCRCAGTRALPVDDDFSLRVIGCPIHLRNDGTQYF |
| Ga0075425_1006875612 | 3300006854 | Populus Rhizosphere | MSSAKRTLRRVIRDWLNGNAEVPLLLRHCEVCGEKAWRPLAESVRGVTIDARLPGGKRADALLTDAQGEIELVIQLEGGSKLENRIEPRPGLPMIVLRAATLDDEPQRWRTLREYGMPAWRCRCAGTRSLPVDDDFSLRVIG |
| Ga0068865_1017232601 | 3300006881 | Miscanthus Rhizosphere | VIQDWLAGTTQAPLLLRHCEVCGEKSWRPLPESVEGVTIDAHLPGGKRADAILTDAQGAVQLVIQLEGGSKLTNRVESSAGLPMIVLRAATLTDEPHRWRTLREHGLPAWRCRCAGTRSLPV |
| Ga0075426_113994901 | 3300006903 | Populus Rhizosphere | IRDWLNGNAEVPLLLRHCEVCGEKAWRPLAESVRGVTIDARLPGGKRADALLTDAQGEIELVIQLEGGSKLENRIEPRPGLPMIVLRAATLDDEPQRWRTLREYGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSDAWTEPGSARRSPSREGVGTLPGSPRSEDGQQYYARVIE |
| Ga0075424_1018039032 | 3300006904 | Populus Rhizosphere | MSSAKRTLRRVIQDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDERGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRTVREHGLPAWRCRCAGTRSLPVDDD |
| Ga0075436_1013432041 | 3300006914 | Populus Rhizosphere | NAEVPLLLRHCEVCGEKAWRPLAESVRGVTIDARLPGGKRADALLTDAQGEIELVIQLEGGSKLENRIEPRPGLPMIVLRAATLDVEPQRWRTLREYGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSDAWTEPGSARRSPSREGLGTLRGSP* |
| Ga0105245_105016062 | 3300009098 | Miscanthus Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCAG |
| Ga0075418_120466691 | 3300009100 | Populus Rhizosphere | VIRDWLGGNAAAPLLLRHCEVCGEKAWRPLVDTVRGVTIDARLPGGKRADAILTNAQGEIELVIQLEGSRLENRIEPRAGLPLVVLRAATLGDEPQRWRTLREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSDGDQYYAR |
| Ga0105248_109950632 | 3300009177 | Switchgrass Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSAREHGLPAWRCRCAGTRSLPVDDDFSLRV |
| Ga0105238_118330531 | 3300009551 | Corn Rhizosphere | MSSAKRTLRKVINDWLNGSTSAPLLLRQCEVCGEKSWRPLPDTVRGVTVDARLPGGKRADAVLTDAQGGLELVIQLEGGSKLQNRIEPRAGLPLVVMRAATLADEPQRWRTLREHGLPA |
| Ga0134121_115055862 | 3300010401 | Terrestrial Soil | MSSVKRTLRRVISDWLSGKTAAPLLLRHCEVCGEKAWRPLPDTVRGVTIDAHLPGGRRADAVLTDARGEIDLVIQLEGGSKLANRIEPRAGLPLVVLRAETLRDAPQRWRTLREHGLPAWRCRCAGTRSLPVDDDFSLRVI |
| Ga0137422_11579511 | 3300011416 | Soil | MSSAKRTLRRVIREWLGGNSAAPLLLRHCEVCGEKSWRPLPDTVRGVTIDANLPGGKRADAILTDVQGEIELVIQLEGGSKLQNRIEPRAGKPLVVLRAATLADEPQRWRTLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGT |
| Ga0137433_10351311 | 3300011440 | Soil | MSSAKRTLRRVIREWLGGNAAAPLLLRHCEVCGEKSWRPLSDTVRGVTIDANLPGGKRADAILTDAQGEIALVIQLEGGSKLENRIEPRAGLPLVVLRAATLADEPQRWRTLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGTQYYARVIEDCGRCA |
| Ga0157283_104002471 | 3300012907 | Soil | MSSAKRTLRRVIREWLGGNAAAPLLLRHCEVCGEKSWRPLPDTVRGVTIDAELPGGKRADAILTDAQGQIELVIQLEGGSKLQNRIEPRAGMPMVVLCAATLADEPQRWRTLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGTQYY |
| Ga0157290_100851833 | 3300012909 | Soil | MSSAKRTLRKVIRDWLTGATSAPLLLRHCEVCGEKSWRPLGDSVRHVTIDARLEGGKRADAILTDAHGGIELVVQLEGGIKLANRIEPRAGLPLVVLRAATFADEPQRWRTLREHGLPAWRCRCAARGRCPSTTISRCA* |
| Ga0157297_103442151 | 3300012914 | Soil | MSSAKRTLQRVIRTWLNGDAPAPLLLRRCEVCGDKSWRPLDDRIRGVTIDARLPNGMRADAVLTDADGRVELVLQLDGGSRLKNRVDTRAGLPMIVLRAATLDDEPERWCPTREHGLPSWRCRCAGTRSLPV |
| Ga0157310_102020591 | 3300012916 | Soil | MSSAKRTLRKVIRDWLTGATSAPLLLRHCEVCGEKSWRPLGDSVRHVTIDARLEGGKRADAILTDAHGGIELVVQLEGGSKLANRIEPRAGLPLVVLRAATFADEPQRWRTLREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSESDQFYARVIEDCGR |
| Ga0164298_104467221 | 3300012955 | Soil | MSSAKRTLRRVITEWLAGAAGAPLLLRHCEVCGEKSWRPLSDTVRGVTIDAHLPGGKRADAILTDARGEVELVIQLEGGSKLANRVEPSAGLPLVVLRAATLADEPNRWRTLREHGMR |
| Ga0164306_104008621 | 3300012988 | Soil | MSSAKRTLRRVITEWLAGAAGAPLLLRHCEVCGEKSWRPLSDTVRGVTIDAHLPGGKRADLILTDDQGRIELVIQLEGGSKLANRIDSRGGLPLVVLRAATLADEPHRWRTLREHGMTAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSDDGQQFYARVIED |
| Ga0157378_116052562 | 3300013297 | Miscanthus Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGAIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSVREHGLPAWRCRCAGTRSLPVDDDFALRVIGCPIHLRTDGQQYYARVI |
| Ga0157375_125041751 | 3300013308 | Miscanthus Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDDGAQFYARVIE |
| Ga0157380_108801191 | 3300014326 | Switchgrass Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPINLRSDDGQQFYARVIEDCGRCAFFVGIG |
| Ga0157377_116766651 | 3300014745 | Miscanthus Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSAREHGLP |
| Ga0157376_126240971 | 3300014969 | Miscanthus Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSVREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGQQYYARVIE |
| Ga0173480_106952822 | 3300015200 | Soil | VITEWLAGAAGAPLLLRHCEVCGEKSWRPLNDTVRGVTIDAHLPGGKRADAILTDDRGEVELVIQLEGGSKLANRVEPSAGLPLVVLRAATLADEPNRWRTLREHGMRGWRCRCAGTRSLPVDDDFSLRVIGSSA* |
| Ga0173480_107166451 | 3300015200 | Soil | MSSAKRTLRKVIRDWLTGATSAPLLLRHCEVCGEKSWRPLGDSVRHVTIDARLEGGKRADAILTDAHGGIELVVQLEGGSKLANRIEPRAGLPLVVLRAATFTDEPQRWRTLREHGLPAWRCRCAGTRSLPVDDDFS |
| Ga0173480_108998971 | 3300015200 | Soil | MSSAKRTLRRVIREWLGGNAAAPLLLRHCEVCGEKSWRPLPDTVRGVTIDAELPGSKRADAILTDAQGQIELVIQLEGGSKLQNRIEPRAGMPMVVLRAATLADEPQRWRTLREHGMPACAAAARERVRFPSTTIFLCV* |
| Ga0132256_1000959273 | 3300015372 | Arabidopsis Rhizosphere | MSSAKRTLRRVIKDWLAGTTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADVILTDGRGEIELVIQLEGGSALANRIEPRAGLPLVVLRAETLADEPHRWRTLRERGLNGWRCRCAGTRSL |
| Ga0163161_117547461 | 3300017792 | Switchgrass Rhizosphere | CADGRTRRSDSGLALRAPVDKHGQPSGTVREVATQVLSQICYFLVPGSWHRANPRRPMSSAKRTLRRVIKDWLAGATSAPLLLRHCEVCGEKSWRPLNDTIQSVTIDAHLRGGKRPGAILTDGRGAIQLVIQLEGGSALAKRIPSRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCAG |
| Ga0184640_102995381 | 3300018074 | Groundwater Sediment | MSSIKRTLRRVIQEWLAGNVSAPLLLRHCEVCGEKSWRPLADTVTAVTIDAHLPGGKRADAILTDAQGRVELVIQLEGGSKLANRIDSRGGLPLVVLRAATLADEPYRWRTIREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPINLRTDDGQQFYAR |
| Ga0190271_110802761 | 3300018481 | Soil | MSSAKRTLRRVIRDWLGGNAAAPLLLRHCEVCGEKSWRPLSDTVRGVTIDANLPGGKRADAILTDAQGEIELVIQLDGGSKLQNRIEPRAGLPLVVLRASTLADEPQRWRTLREHSLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGTQYYARVIDDCGRCAFFVGI |
| Ga0190271_112679081 | 3300018481 | Soil | MSSAKRTLQRVIRAWLDGDAPAPLLLRRCEVCGEKSWRPLDERVRGVTIDARLPNGMRADALLTDANGGVELVIQLEGGSRLQNRVDPRAGMPMIVLRAETLADEPERWRALREHGLTSWRCRCAG |
| Ga0173482_106895801 | 3300019361 | Soil | RRQMSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSVREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGQQYYARVIEDCGRCAFFVGI |
| Ga0193697_10777301 | 3300020005 | Soil | MSSAKRTLQRVIRAWLDGDAPAPLLLRRCEVCGEKSWRPLDDRIRSVTIDARLPNGMRADALLTDANGDVALVIQLEGGSRLQNRVDSRAGMPLVVLRAETLDDEPERWRTLREHGMPNWRCRCAGTRSLPVDDDFSLRVIGCPI |
| Ga0193696_11377511 | 3300020016 | Soil | MSSIKRTLRRVIQEWLAGNVSAPLLLRHCEVCGEKSWRPLADTVTAVTIDAHLPGGKRADAILTDAQGRVELVIQLEGGSKLANRIDSRGGLPLVVLRAATLADEPYRWRTIREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPINLRTDDGQQFYARVIEDCGR |
| Ga0210387_107906612 | 3300021405 | Soil | MSAAKRTLRRVISSWLNGDSQAPQLLRRCETCGEKCWRPLDSGIKHIELDARLANGARADVLLTDDGGDVQLVIQLDGGSRLPNRVDPRAGLPLVVLRAATLDADPARWASLREFGLPAWRCRCAGTRALSVDDDFSLRALGCPIHLRHDGTQHFARVIE |
| Ga0222622_113382541 | 3300022756 | Groundwater Sediment | RLLINLGMANCHRFVTSWFRVRGNVPSLRRQMSSAKRTLRRVIREWLGGSAAAPLLLRHCEVCGEKSWRPLSETVRGVTIDANLPGGKRADAILTDAHGEIELVIQLEGGSKLQNRIEPRAGMPLVVLRAATLADEPQRWRTLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGGP |
| Ga0247679_10817991 | 3300024251 | Soil | MSSAKRTLRRVIRDWLAGDATAPLLLRHCEVCGEKSWRPLAETVRGITIDARLPGGKRADAILTDAAGEVELVIQLEGGTKLENRIEPRAGLPLVVLRAATLEDEPHRWRTLREHGLTGW |
| Ga0207697_104819521 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHG |
| Ga0207688_102503961 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | VIKDWLAGATSAPLLLRHCEVCGEKSWRPLNDTIQSVTIDAHLPGGKRADVLLTDGRGEIELVIQLEGGSALANRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDDG |
| Ga0207680_112988001 | 3300025903 | Switchgrass Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAW |
| Ga0207660_109619372 | 3300025917 | Corn Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAW |
| Ga0207659_109123202 | 3300025926 | Miscanthus Rhizosphere | VIKDWLAGATSAPLLLRHCEVCGEKSWRPLNDTIQSVTIDAHLPGGKRADVLLTDGRGEIELVIQLEGGSALANRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWR |
| Ga0207701_108800471 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MSSAKRTLRRVIREWLGGSAAAPLLLRHCEVCGEKSWRPLSETVRGVTIDANLPGGKRADAILTDAQGEIDLVIQLEGGSKLQNRIEPRAGLPLVVLRAATLADEPQRWRTLREHG |
| Ga0207644_101005781 | 3300025931 | Switchgrass Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGL |
| Ga0207690_110766871 | 3300025932 | Corn Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPINLRSDDGQQFYARVIEDCGRCAFFVGI |
| Ga0207670_101661411 | 3300025936 | Switchgrass Rhizosphere | MSSAKRTLRRVIKDWLAGATSAPLLLRHCEVCGEKSWRPLNDTIQSVTIDAHLPGGKRADVLLTDGRGEIELVIQLEGGSAPANRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPV |
| Ga0207669_108993462 | 3300025937 | Miscanthus Rhizosphere | VIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCAGTRSLPV |
| Ga0207704_105657232 | 3300025938 | Miscanthus Rhizosphere | VIQDWLAGTTQAPLLLRHCEVCGEKSWRPLPESVEGVTIDAHLPGGKRADAILTDAQGAVQLVIQLEGGSKLTNRVESSAGLPMIVLRAATLTDEPHRWRTLREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLR |
| Ga0207711_118207611 | 3300025941 | Switchgrass Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSAREHGLPAWRCRCAGTRSLPVDDDFSLRVI |
| Ga0207661_113235711 | 3300025944 | Corn Rhizosphere | MSSAKRTLRRVIKDWLSGRTSAPLLLRQCEVCGEKSWRPLGDNIRGVIVDAQLPGGKRADAILTDAQGEIALVIQLEGGSKLQNRIEPRAGLPLVVLRAATLADEPQRWRALREHGMPAWRCR |
| Ga0207658_105010011 | 3300025986 | Switchgrass Rhizosphere | MSSAKRTLRRVITEWLAGAAGAPLLLRHCEVCGEKSWRPLSDTVRGVTIDAHLPGGKRADAILTDARGEVELVIQLEGGSKLANRIEPRAGLPLVVLRAATLADEPHRWRTLREHGMTAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSDDGQQFYARVIEDCGRCAFF |
| Ga0207658_114713011 | 3300025986 | Switchgrass Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSD |
| Ga0207677_111861321 | 3300026023 | Miscanthus Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGAIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSVREHGLPAWRCRCAGTRSLPVDDDSS |
| Ga0207641_100282015 | 3300026088 | Switchgrass Rhizosphere | MSSAKRTLRSVIRDWLAGRSDAPLLLRHCEVCGEKSWRPLADTVRGVTVDARLPGGKRADVILTDDHGEIELVIQLEGGSKLQNRIEPRAGLPLVVLRAATLSDEPQRWRSVREHGLPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSAWTEPGFARRSPSREGVGTLPGSPRSEDGQQYY |
| Ga0207648_117911451 | 3300026089 | Miscanthus Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSL |
| Ga0207674_109316422 | 3300026116 | Corn Rhizosphere | MSSAKRTLRRVIREWLGGNAAAPLLLRHCEVCGEKSWRPLPDTVRGVTIDAELPGGKRADAILTDAQGQIELVIQLEGGSKLQNRIEPRAGMPMVVLRAATLADEPQRWRTLREHGMPAWRCRCAGT |
| Ga0207675_1000348951 | 3300026118 | Switchgrass Rhizosphere | MSSAKRTLRRVIKDWLAGNTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEIELVIQLEGGSALANRIESRAGLPLVVLRAETLADEPLRWGTLREHGLTAWRCRCAGTRSLPVDDDFSLRVI |
| Ga0207675_1026376251 | 3300026118 | Switchgrass Rhizosphere | RQMSSAKRTLRRVIREWLGGNAAAPLLLRHCEVCGEKSWRPLSDSVRGVTIDANLAGGKRADAILTDAQGEIELVIQLEGGSKLQNRIEPRAGMPLVVLRAATLADEPQRWRTLREHGMPAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDGTQYYARVIEDCGRCAFF |
| Ga0207683_100766523 | 3300026121 | Miscanthus Rhizosphere | MSSAKRTLRRVIRSWLAGSTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADAILTDGRGEVELVIQLEGGSTLANRIEPRAGLPLVVLRAATLDDEPHRWRTLREHGLTAWRCRCAGTRSLPVDDDFSLRVIG |
| Ga0209275_108437701 | 3300027884 | Soil | AIAADPAQERGFEKMRIAFGDFGEPLRGRPIVLFVESQAPQLLRRCETCGEKCWRPLDSAIKHIELDARLANGARADVLLTDDNGDVQLVIQLDGGSRLPNRVDPRAGLPLVVLRAATLDADPARWASLREFGLPAWRCRCAGTRSLSVDDDFSLRAIGCPIHLRHDGTQHFARVI |
| Ga0268265_110511801 | 3300028380 | Switchgrass Rhizosphere | VIKDWLAGATSAPLLLRHCEVCGEKSWRPLNDTIQSVTIDAHLPGGKRADVLLTDGRGEIELVIQLEGGSALANRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDD |
| Ga0307306_101575021 | 3300028782 | Soil | MSSAKRTLRRVIRGWLAGEAPAPLLLRQCEVCGEKSWRPLAETVRGLTIDAHLLGGKRADAILTDARGEIELVIQLEGGSKLANRIEPRAGLPLVVLRAATLADEPHRWRTLREHGLAAWRCRCAGTRSLPVDDDFSLRVIGCPIHLRSDDGQQFYARVIEDCGRCAFFV |
| Ga0311337_108178981 | 3300030000 | Fen | MSAAKRTLRRVISSWLNGESHAPQLLRRCETCGEKCWRPLDVSIKRVEIDARLANGARADLLLTDDRGGVQLVIQLDGGSRLPNRVDPRAGLPLVVLRAATLDADPARWATLREFGMPAWRCRCAGTRSLSVDDDFSLRAIGCPIHLRHDGAQHFARVIEDCGRCAFF |
| Ga0318528_104112791 | 3300031561 | Soil | MSSAKRTLRKVIRSWLDGTGPTPELLRRCETCGEKSWRPLDAGVRNVVIDARLPNGTRADVLLTDAAGRIELVIQLEGGTRLANRVEPSSGLPLIVLRAATLDDTPERLRALREYALPAW |
| Ga0310886_106277991 | 3300031562 | Soil | VIKDWLAGTTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADVILTDGRGEIELVIQLEGGSALANRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPV |
| Ga0318555_103442022 | 3300031640 | Soil | MHRANVASSVFPRPMSHGKRTLRRVIRQWLDGHAPAPQLLRHCEICGEKSWRPLDVAVRDVTIDARLPNGMRADAVLTDADGGVQLVIQIDGGSRLANRVDARAGLPLIVLRASTLLEEPQRWWTMREHGLPAWRCR |
| Ga0318561_101421892 | 3300031679 | Soil | MSSAKRTLRKVVRSWLDGVGPTPEVLRHCETCGEKSWRPLDATVRNVTVDARLPNGTRADLLLTDAAGRIELVVQLEGGSRLVNRVQASSGLPLIVLRAETIEDGPERWRALREYALPAWRCRCAGARTLPVDDDFSLRA |
| Ga0318560_107506371 | 3300031682 | Soil | APNNPPPLRKVTAWVCHRFVTFPSLNRGIVRLSADMSSAKRTLRKVVRSWLDGVGPTPEVLRHCETCGEKSWRPLDATVRNVTVDARLPNGTRADLLLTDAAGRIELVVQLEGGSRLVNRVQASSGLPLIVLRAETIEDGPERWRALREYALPAWRCRCAGARTLPVDDDFSLRA |
| Ga0318502_100616452 | 3300031747 | Soil | MSSAKRTLRKVVRSWLDGVGPTPEVLRHCETCGEKSWRPLDATVRNVTVDARLPNGTRADLLLTDAAGRIELVVQLEGGSRLVNRVQASSGLPLIVLRAETIEDGPERWRALREYALPAWRCRCAGARTLPVDDDFSLRAIGCPIRLRSDGAQYFARVIED |
| Ga0310903_102759782 | 3300032000 | Soil | VIKDWLAGTTSAPLLLRHCEVCGEKSWRPLNDTIQGVTIDAHLPGGKRADVILTDGRGEIELVIQLEGGSALANRIEPRAGLPLVVLRAETLADEPHRWRTLREHGLNGWRCRCAGTRSLPVDDDF |
| Ga0318525_106320971 | 3300032089 | Soil | VVTFPSLNRGIVRLPADMSSAKRTLRKVIRSWLDGTGPTPELLRRCETCGEKSWRPLDAGVRNVVIDARLPNGTRADVLLTDAAGRIELVIQLEGGTRLANRVEPSSGLPLIVLRAATLDDTPERLRALREYALPAWRCRCAGARTLPVDDDFSLRAIGCPIRLRTDGTQHYARVIEDCG |
| Ga0310812_103521711 | 3300032421 | Soil | MSSAKRTLRRVIRDWLAGDATAPLLLRHCEVCGEKSWRPLAETVRGITIDARLPGGKRADAILTDAAGEVELVIQLEGGTKLENRIEPRAGLPLVVLRAATLEDEPHRWRTLREHGLTGWRCRCAGTRSLPVDDDFSLRVIGCPIHLRTDAQTEPGSAG |
| Ga0364943_0167593_2_421 | 3300034354 | Sediment | MSSAKRTLRRVIRDWLNGGADAPLLLRHCEVCGEKSWRPLAETVRSVTIDARLPGGKRADALLTDAQGEIELVIQLEGGSKLQNRIEPRPGLPLIVLRAATLADEPQRWRTLREHGLPAWRCRCAGTRSLPVDDDFSLRV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |