Metagenome / Metatranscriptome Family F096792

Basic Information
Family ID	F096792
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	43 residues
Representative Sequence	MWAMSSASAPASATGLADGQRDAVIHTEDLTKIYPGTDFAAVDRLN
Number of Associated Samples	91
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.46 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Most Common Taxonomy
Group	Bacteria (76.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.577 % of family members)
Environment Ontology (ENVO)	Unclassified (32.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.038 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 13.51% β-sheet: 0.00% Coil/Unstructured: 86.49%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03807	F420_oxidored	5.77
PF00440	TetR_N	4.81
PF02687	FtsX	4.81
PF00196	GerE	3.85
PF01734	Patatin	3.85
PF13556	HTH_30	3.85
PF00106	adh_short	2.88
PF12680	SnoaL_2	2.88
PF03448	MgtE_N	2.88
PF00067	p450	2.88
PF00912	Transgly	1.92
PF00561	Abhydrolase_1	1.92
PF00005	ABC_tran	1.92
PF03061	4HBT	0.96
PF10417	1-cysPrx_C	0.96
PF00165	HTH_AraC	0.96
PF07690	MFS_1	0.96
PF08241	Methyltransf_11	0.96
PF06197	DUF998	0.96
PF11716	MDMPI_N	0.96
PF04679	DNA_ligase_A_C	0.96
PF13520	AA_permease_2	0.96
PF01022	HTH_5	0.96
PF02190	LON_substr_bdg	0.96
PF01471	PG_binding_1	0.96
PF02801	Ketoacyl-synt_C	0.96
PF00903	Glyoxalase	0.96
PF00415	RCC1	0.96
PF13191	AAA_16	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	3.85
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	3.85
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	3.85
COG2124	Cytochrome P450	Defense mechanisms [V]	2.88
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	2.88
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	1.92
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	1.92
COG5184	Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins	Cell cycle control, cell division, chromosome partitioning [D]	1.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.96
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.92 %
Unclassified	root	N/A	22.12 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.08 %
Unclassified	root	N/A	22.12 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.08 %
Unclassified	root	N/A	22.12 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.46 %
Unclassified	root	N/A	22.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.81 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.81 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.96 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.81 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	0.96 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.96 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.96 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.81 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.96 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.96 %
Actinocatenispora sera	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora sera	0.96 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.81 %
Frankia sp. Iso899	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	0.96 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.96 %
Actinocatenispora sera	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora sera	0.96 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_102854541	Not Available	645	Open in IMG/M
3300005332\|Ga0066388_108459441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300005434\|Ga0070709_10087213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2050	Open in IMG/M
3300005546\|Ga0070696_100421606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1048	Open in IMG/M
3300005549\|Ga0070704_101319024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300005602\|Ga0070762_10409714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	875	Open in IMG/M
3300005617\|Ga0068859_101708601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300006047\|Ga0075024_100864807	Not Available	511	Open in IMG/M
3300006162\|Ga0075030_101537611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300006854\|Ga0075425_100782970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1093	Open in IMG/M
3300010048\|Ga0126373_12338645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300010333\|Ga0134080_10409627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300010343\|Ga0074044_10950067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300010360\|Ga0126372_10200200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1662	Open in IMG/M
3300010360\|Ga0126372_10561865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1086	Open in IMG/M
3300010361\|Ga0126378_12296991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300010361\|Ga0126378_13165361	Not Available	524	Open in IMG/M
3300010379\|Ga0136449_103066908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300010396\|Ga0134126_10663646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1188	Open in IMG/M
3300010401\|Ga0134121_10536131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1084	Open in IMG/M
3300010401\|Ga0134121_10967342	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300010876\|Ga0126361_10953882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300012208\|Ga0137376_10614587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora sera	940	Open in IMG/M
3300012971\|Ga0126369_10482545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1294	Open in IMG/M
3300014489\|Ga0182018_10532624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300016357\|Ga0182032_11763905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300017928\|Ga0187806_1301594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300017946\|Ga0187879_10830119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300017955\|Ga0187817_11086021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300017961\|Ga0187778_10736371	Not Available	669	Open in IMG/M
3300017966\|Ga0187776_10346530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300017974\|Ga0187777_10373757	Not Available	983	Open in IMG/M
3300018001\|Ga0187815_10231566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300018007\|Ga0187805_10524345	Not Available	556	Open in IMG/M
3300018047\|Ga0187859_10824535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300018058\|Ga0187766_10089824	All Organisms → cellular organisms → Archaea	1850	Open in IMG/M
3300018058\|Ga0187766_11418620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	510	Open in IMG/M
3300018085\|Ga0187772_10982092	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300018431\|Ga0066655_10260585	Not Available	1112	Open in IMG/M
3300020581\|Ga0210399_10833602	Not Available	751	Open in IMG/M
3300020581\|Ga0210399_11576080	Not Available	507	Open in IMG/M
3300021181\|Ga0210388_10077879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2808	Open in IMG/M
3300021384\|Ga0213876_10116999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1415	Open in IMG/M
3300021402\|Ga0210385_10022226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4032	Open in IMG/M
3300021402\|Ga0210385_10726808	Not Available	760	Open in IMG/M
3300021403\|Ga0210397_11287795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300021406\|Ga0210386_10332114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1306	Open in IMG/M
3300021433\|Ga0210391_10900489	Not Available	690	Open in IMG/M
3300024181\|Ga0247693_1058809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300025627\|Ga0208220_1050102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1227	Open in IMG/M
3300025906\|Ga0207699_10074465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2086	Open in IMG/M
3300025927\|Ga0207687_11612220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300027783\|Ga0209448_10062957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1248	Open in IMG/M
3300027812\|Ga0209656_10063488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2035	Open in IMG/M
3300028742\|Ga0302220_10366382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300028775\|Ga0302231_10439395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300028781\|Ga0302223_10030838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1903	Open in IMG/M
3300028789\|Ga0302232_10243977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	891	Open in IMG/M
3300028877\|Ga0302235_10491194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300029999\|Ga0311339_11430556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300030007\|Ga0311338_11473367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300030494\|Ga0310037_10264164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300030503\|Ga0311370_11466744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300031236\|Ga0302324_102645654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300031544\|Ga0318534_10279628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300031544\|Ga0318534_10409705	Not Available	778	Open in IMG/M
3300031545\|Ga0318541_10326993	Not Available	856	Open in IMG/M
3300031549\|Ga0318571_10094400	Not Available	970	Open in IMG/M
3300031564\|Ga0318573_10334434	Not Available	812	Open in IMG/M
3300031679\|Ga0318561_10057373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1965	Open in IMG/M
3300031708\|Ga0310686_103650617	Not Available	1325	Open in IMG/M
3300031708\|Ga0310686_119648438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1078	Open in IMG/M
3300031713\|Ga0318496_10483578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300031747\|Ga0318502_10079172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1788	Open in IMG/M
3300031777\|Ga0318543_10383435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300031796\|Ga0318576_10414345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300031805\|Ga0318497_10171856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300031835\|Ga0318517_10327472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300031835\|Ga0318517_10583164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300031860\|Ga0318495_10212899	Not Available	869	Open in IMG/M
3300031880\|Ga0318544_10317307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300031896\|Ga0318551_10044605	Not Available	2214	Open in IMG/M
3300031897\|Ga0318520_10509712	Not Available	743	Open in IMG/M
3300031910\|Ga0306923_10258129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1994	Open in IMG/M
3300031910\|Ga0306923_11287233	Not Available	776	Open in IMG/M
3300031912\|Ga0306921_12715285	Not Available	509	Open in IMG/M
3300031942\|Ga0310916_10626888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300031945\|Ga0310913_10181004	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300031946\|Ga0310910_10422399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1057	Open in IMG/M
3300031954\|Ga0306926_11946209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300032001\|Ga0306922_10244643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1927	Open in IMG/M
3300032008\|Ga0318562_10026172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	3074	Open in IMG/M
3300032009\|Ga0318563_10052880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2085	Open in IMG/M
3300032041\|Ga0318549_10292361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300032054\|Ga0318570_10046543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1786	Open in IMG/M
3300032055\|Ga0318575_10054349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1846	Open in IMG/M
3300032065\|Ga0318513_10335497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300032065\|Ga0318513_10454270	Not Available	626	Open in IMG/M
3300032067\|Ga0318524_10158856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1146	Open in IMG/M
3300032160\|Ga0311301_11845444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300032805\|Ga0335078_10382471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1855	Open in IMG/M
3300032805\|Ga0335078_11281151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838	Open in IMG/M
3300032805\|Ga0335078_12644069	Not Available	513	Open in IMG/M
3300032828\|Ga0335080_10522179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1258	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.58%
Aquatic	Environmental → Aquatic	10.58%
Plants	Host-Associated → Plants	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.92%
Freshwater	Environmental → Aquatic → Freshwater	8.65%
Peat	Environmental → Terrestrial → Peat	8.65%
Sediment	Environmental → Aquatic → Sediment	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.65%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.58%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096792

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1028545412	3300004092	Bog Forest Soil	MSSVPAPVSAIDRPDGHTDAVIHTEDLTKVYPGADFAAVDHLNLDVR
Ga0066388_1084594412	3300005332	Tropical Forest Soil	MWAMSSAPASASAAGKADGQRDAVIHTEDLTKVYQGTDFAAVD
Ga0070709_100872133	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGTAEAQASAAGQADGEPGAVIHTEDLTKVYPGTDFAAVDRLNLDV
Ga0070696_1004216063	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MWAMSSASAPASATGLADGQRDAVIHTEDLTKIYPGTDFAAVDRLN
Ga0070704_1013190242	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MWAMSSASAPASATGLADGQRDAVIHTEDLTKIYPGTDFAAVDRLNL
Ga0070762_104097141	3300005602	Soil	MWPMSTADAPAGAAGTRDADRDAVIHTEDLTKVYPGTD
Ga0068859_1017086013	3300005617	Switchgrass Rhizosphere	MWAMSSASAPASATGLADGQRDAVIHTEDLTKIYPGTDFAAVDRLNLDV
Ga0075024_1008648072	3300006047	Watersheds	MCAMSTADAPAGAAGIRDADRDAVIHTEDLTKVYPGTDFAAVDRLNLDV
Ga0075030_1015376111	3300006162	Watersheds	MSAAQAPASPVSSASGLAGRGPDAVIHTEDLTKVY
Ga0075425_1007829701	3300006854	Populus Rhizosphere	MWAMSSASAPASATGLANGQRDAVIHTEDLTKIYPGTD
Ga0126373_123386452	3300010048	Tropical Forest Soil	MWAMSSASAPAGATGLADGQRDAVIHTEDLTKIYAGTDFAAVDRLNLDVE
Ga0134080_104096272	3300010333	Grasslands Soil	MWAMSSASAPASATGLAGGQRDAVIHTEDLTKIYPGTDFAAVDKLNLDV
Ga0074044_109500671	3300010343	Bog Forest Soil	MSTAQAPVTPAGINDGPQDAVIHTQDLTKVYPGADFSAVDKLNLDV
Ga0126372_102002001	3300010360	Tropical Forest Soil	MWAMSSASAPAGATGLADGQRDAVIHTEDLTKIYAGTDFAAVDRLN
Ga0126372_105618652	3300010360	Tropical Forest Soil	MSTTQAAASGTGALEGQPGAVIHTENLTKVYPGTDFAAVDHLD
Ga0126378_122969911	3300010361	Tropical Forest Soil	MWAMSSASAPAGATGLAGGSQDAVIHTEDLTKIYAGTDFAAVDRLNLD
Ga0126378_131653612	3300010361	Tropical Forest Soil	MCRMGIADAPASTAGLPDGQRPEDHRDAVIHTEDLTKIYPGTDFAAVD
Ga0136449_1030669081	3300010379	Peatlands Soil	MGTAQAPAVTAGRDGGEPDAVIHTEDLTKVYPGTDFAAVDKLNLD
Ga0134126_106636462	3300010396	Terrestrial Soil	MGTAEAQASAAGQADGEPGAVIHTEDLTKVYPGTDFAAVDRLNLDVRA
Ga0134121_105361312	3300010401	Terrestrial Soil	MCAMSTADAPAGAGTLDAERDAVIHTEDLTKIYAGTDFAAVDRLNL
Ga0134121_109673421	3300010401	Terrestrial Soil	MSTAHMPAGTTERPEGRPDAVIHTEDLTKVYPGTDFAAVDRLNLDVAA
Ga0126361_109538822	3300010876	Boreal Forest Soil	MSTAQAPVTPADLGEGEPAAVIHTEDLTKVYPGTDFAAVDKLN
Ga0137376_106145871	3300012208	Vadose Zone Soil	MWAMSSASAPASAAGLAEGQRDAVIHTENLTKVYPGTDFAAVDK
Ga0126369_104825451	3300012971	Tropical Forest Soil	MWAMSSASAPASAAGPAGGQRDAVIHTEDLTKVYPGTD
Ga0182018_105326241	3300014489	Palsa	MSTVHAPASTTGLPEGERGSVIHTEDLTKVYPGADFTA
Ga0182032_117639053	3300016357	Soil	MSIAQAPTGAADRPDGRADGVIHTEDLTKVYPGTDFAAVDRLNL
Ga0187806_13015942	3300017928	Freshwater Sediment	MRAAASPQSSLRVPGAEPAAIIHTEDLTKVYPGTDFAAVDKLNLD
Ga0187879_108301192	3300017946	Peatland	MGTAQAPAAAAGSPGTEHGGEPDAVIHTENLTKVYPGTAFA
Ga0187817_110860211	3300017955	Freshwater Sediment	MGTAQAPTVAAGTEPGGEPDAVIHTENLTKVYPGTDFAAV
Ga0187778_107363711	3300017961	Tropical Peatland	MWAMSSASAAASATGLNGDQRDAIIHTEELTKVYPGTDFAA
Ga0187776_103465301	3300017966	Tropical Peatland	VAHPAQRTMWAMSSASAPASAAGLADGQRDAVIHTEDLTKVYPGTDFAAVDR
Ga0187777_103737572	3300017974	Tropical Peatland	MSTASAAASAAGLSGGEPGGVIHTEDLTKVYHGTDFAAVDKLNLDV
Ga0187815_102315662	3300018001	Freshwater Sediment	MRAAASPQSSLRVPGAEPAAIIHTEDLTKVYPGTDFAAVDKLNLDV
Ga0187805_105243452	3300018007	Freshwater Sediment	MPKEGSAISAAPAPAGATSLATGEQAAVIHTEDLTKVYPGADFAAVDKLNL
Ga0187859_108245352	3300018047	Peatland	MSTKPAPVTPASPGDGESASVIHTEDLTKVYPGTDFAAVDHLNLDVQAG
Ga0187766_100898241	3300018058	Tropical Peatland	MVYPPQRTMWAMSSASAAASTTGLAGGQRDAVIHTEDLTKVYPG
Ga0187766_114186202	3300018058	Tropical Peatland	MSTAPAAANSASHTGGRPDGQPGAVIHTEDLTKIYPGT
Ga0187772_109820921	3300018085	Tropical Peatland	MGAVQAATQAAGSGEPDAVIHTEDLTKVYPGTDFA
Ga0066655_102605851	3300018431	Grasslands Soil	MSTADAPAGTGTRDAERDAVIHTEDLTKIYAGTDFAAVDRLNLD
Ga0210399_108336021	3300020581	Soil	MSTAQAPTSAPGRPDGQEDGVIHTEDLTKVYPGTDFAAVDR
Ga0210399_115760801	3300020581	Soil	MRTAHAPASAAGQPGQEPGGEPDAVIHTENLTKVYPDTDFAA
Ga0210388_100778791	3300021181	Soil	MSTAQAPASPVSSTGGEPDGVIHTEDLTKVYPGTDFAAVD
Ga0213876_101169993	3300021384	Plant Roots	MSTAAAPARPAGQQPGGEPDAVIHTEDLTKVYRGTDF
Ga0210385_100222261	3300021402	Soil	MSTVETPASATHSPEANPAGIIHTEDLTKVYPGTDFAAVD
Ga0210385_107268082	3300021402	Soil	MSTAEVTASQDGRPRKDEPDAVIHTEDLTKVYPGTDF
Ga0210397_112877951	3300021403	Soil	MSTAPAPASATGRPEGQPGGVIHTEDLTKVYPGTDFAAVD
Ga0210386_103321141	3300021406	Soil	MGTEATARSPAGGPGGKPEAVIHTEDLTKVYPGTDFTAVDKLNL
Ga0210391_109004891	3300021433	Soil	MSTVEAPASATHSPEANPAGIIHTEDLTKVYPGTDFAAVDR
Ga0247693_10588091	3300024181	Soil	MWAMSSASAPASATGLADGQRDAVIHTEDLTKIYPGTDFAAVDKL
Ga0208220_10501021	3300025627	Arctic Peat Soil	VAMSTAHAPASSTDLPGGEPVAVIHTSDLTKIYPGTD
Ga0207699_100744651	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGTAEAQASAAGQADGEPGAVIHTEDLTKVYPGTDFAAVDRLNLDVR
Ga0207687_116122202	3300025927	Miscanthus Rhizosphere	MWAMSSASAPASATGLADDQRDAVIHTEDLTKIYPG
Ga0209448_100629571	3300027783	Bog Forest Soil	MGTARAPAVTAGPPGTEHGGEPDAVIHTENLTKVYPGTDFAAV
Ga0209656_100634884	3300027812	Bog Forest Soil	MSTAHAPASPAELAGGEPGAVIHTEDLTKVYPGTDFAAVDRLNLDVRA
Ga0302220_103663822	3300028742	Palsa	MSTAQAPVIPAGPGDGEAASVIHTEDLTKVYPGTDFAAVDHLNLD
Ga0302231_104393952	3300028775	Palsa	MSTAQAPVTPAGPGDGEPAPVIHTEDLTKVYPGTDF
Ga0302223_100308381	3300028781	Palsa	MSTAPAPVTPARPGDGESVPKTSVIHTQDLTKVYPGTD
Ga0302232_102439772	3300028789	Palsa	MSTAQAHASATDLPAAGPVAVIHTEDLTKVYPGADLAAVDQLNLDVQAG
Ga0302235_104911941	3300028877	Palsa	MSTAQAPAAAAGRPAGEEDAVIHTADLTKVYPGTDF
Ga0311339_114305562	3300029999	Palsa	MSTAQAPVIPAGPGDGEAASVIHTEDLTKVYPGTDFAAVDHL
Ga0311338_114733672	3300030007	Palsa	MNTAQAPVTPATPGGEPDPLTSVIHTEDLTKVYHGTDFAAVDHLNLDVQAG
Ga0310037_102641643	3300030494	Peatlands Soil	MSTAQAPASAASLAGGPPAAVIHTEDLTKVYPGTDFAAVDR
Ga0311370_114667441	3300030503	Palsa	MSTAPAPVTPARPGDGESDPKTSVIHTQDLTKVYPGTDFAAVDHLNL
Ga0302324_1026456541	3300031236	Palsa	MSTAQAPAAAAGRPAGEEDAVIHTADLTKVYPGTDFAAVDR
Ga0318534_102796281	3300031544	Soil	MSTAEARASAAGTDHQDAVIHTEDLTKIYQGTDFAAVDKLN
Ga0318534_104097051	3300031544	Soil	VDDVSSASAPASAAGRAGGSRDAVIHTEDLTKIYP
Ga0318541_103269931	3300031545	Soil	MCRMSTAEATAGTGLPDGQRDAVIHTEDLTKVYPGTDFA
Ga0318571_100944001	3300031549	Soil	MCRMSTAEATAGTGLPDGQRDAVIHTEDLTKVYPGTD
Ga0318573_103344342	3300031564	Soil	MCRMSTAEATAGTGLPDGQRDAVIHTEDLTKVYPGTDFAAVDK
Ga0318561_100573731	3300031679	Soil	MWAMSSASAAAGATGLADGGQRDAVIHTEDLTKIYAGTD
Ga0310686_1036506172	3300031708	Soil	LKEGSAISTAPAPAGATSLAHGQHAVAIHTEDLTKVYPGTDFAAVDK
Ga0310686_1196484383	3300031708	Soil	MRTAHAPASAAGLPDQEPDAVIHTEDLTKVYPDTDFAAVD
Ga0318496_104835782	3300031713	Soil	MWAMSSASAPASAAGRAGGQRDAVIHTEDLTKIYPGTDFAAVDRLNLDVG
Ga0318502_100791721	3300031747	Soil	MWAMSSASAAAGATGLADGGQRDAVIHTEDLTKIYA
Ga0318543_103834352	3300031777	Soil	MWAMSSASAPAGATGLANGRRDAVIHTEELTKVYPGTDFAAVDRLNLDVE
Ga0318576_104143452	3300031796	Soil	MSTAQAPTSATDRPDGHADGVIHTEDLTKIYPGTDFAAV
Ga0318497_101718563	3300031805	Soil	VSSASAPASAAGRAGGSRDAVIHTEDLTKIYPGTDFAAV
Ga0318517_103274721	3300031835	Soil	MWAMSSASSPASAAGLAGGQRDAVIHTEDLTKVYPGT
Ga0318517_105831642	3300031835	Soil	MWAMSSASAAAGATGLADGGQRDAVIHTEDLTKIYAG
Ga0318495_102128991	3300031860	Soil	MSTAPAPTSATDRPDGRPDGVIHTEDLTKIYPGTD
Ga0318544_103173072	3300031880	Soil	MCAMSTADAPAGAGTRDAARDAVIHTEDLTKVYPG
Ga0318551_100446053	3300031896	Soil	MSTAQAPTSATDRPDGHADGVIHTEDLTKIYPGTDFAAVDRLN
Ga0318520_105097121	3300031897	Soil	MSTAPAPTSATDRPDGRPDGVIHTEDLTKIYPGTDFAAVDRLN
Ga0306923_102581291	3300031910	Soil	MWAMSSASAAAGATGLADGQRDAVIHTEDLTKIYAGTDF
Ga0306923_112872332	3300031910	Soil	MSTAPAPTSATDRPDGRPDGVIHTEDLTKIYPGTDFAAVDRLNLDVR
Ga0306921_127152851	3300031912	Soil	MCRMSTAEATAGTGLPDGQRDAVIHTEDLTKVYPG
Ga0310916_106268881	3300031942	Soil	MSTAQAPTSATDRPDGHADGVIHTEDLTKIYPGTDF
Ga0310913_101810043	3300031945	Soil	MCAMSTADAPGGTGAGTHDAERGAVIHTEDLSKIYAGTDF
Ga0310910_104223991	3300031946	Soil	MWAMSSASAAAGATGLADGGQRDAVIHTEDLTKIYAGTDFAAVDRLNLDVE
Ga0306926_119462092	3300031954	Soil	MSTAQAPTSAPGRPDGQQDGVIHTEDLTKVYPGTDFAAVDRLNLDVRA
Ga0306922_102446431	3300032001	Soil	MSSASAAAGVTGLADGQRDAVIHTEDLTKIYAGTDFAAVDRLNLD
Ga0318562_100261723	3300032008	Soil	MWAMSSASAAAGATGLADGGQRDAVIHTEDLTKIYAGTDFAAVDRLNL
Ga0318563_100528801	3300032009	Soil	MWAMSSASSPASAAGLAGGQRDAVIHTEDLTKVYPGTDFAAVDK
Ga0318549_102923612	3300032041	Soil	MSTTEAKTSAAKVDLPDGVIHTEDLTKIYQGTDFAAVDKLNLDIRT
Ga0318570_100465431	3300032054	Soil	VVRPPQRTMWAMSSASAAAGVTGLADGQRDAVIHTEDLTKIYAGTDFAAV
Ga0318575_100543491	3300032055	Soil	MWAMSSASAAAGATGLADGGQRDAVIHTKDLTKIYAGTDFAAVDRLNLDV
Ga0318513_103354973	3300032065	Soil	MSSASAAAGVTGLADGQRDAVIHTEDLTKIYAGTDFA
Ga0318513_104542702	3300032065	Soil	MCPMSTADAPAGSAGTRDAGRDAVIHTEDLTKVYPGTD
Ga0318524_101588561	3300032067	Soil	MSTAQAPTSATDRPDGRPDGVIHTEDLTKIYPGTDFAAVDRLNLDV
Ga0311301_118454441	3300032160	Peatlands Soil	MGTAQAPAAAAGPPGTEHGGEPDAVIHTENLTKVYPGTDFAAVDQLNLDV
Ga0335078_103824713	3300032805	Soil	VTSGTQVAAGTAGLSDGEPSAVIHTEDLTKVYGGTDFAA
Ga0335078_112811511	3300032805	Soil	MGTAEAQASAAGQADREPGAVIHTEDLTKVYPGTDFAAVDRLNLDV
Ga0335078_126440691	3300032805	Soil	MSTAEAAAKSAAQAGEPDAIIHTEDLTKVYPGTDFAAVDRLNLDV
Ga0335080_105221791	3300032828	Soil	MWAMSSASAPASATGLADGQRDAVIHTEDLTKIYPGTDFAAVDKLNLDVEA

Hidden Markov Model


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