Metagenome Family F096781

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096781
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	39 residues
Representative Sequence	VGTSLAAEPLLSLAVTVTSEQRVESVLQSIVQGLASQ
Number of Associated Samples	76
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.12 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.808 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.15% β-sheet: 0.00% Coil/Unstructured: 53.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00158	Sigma54_activat	5.77
PF02502	LacAB_rpiB	4.81
PF02954	HTH_8	2.88
PF12833	HTH_18	2.88
PF02780	Transketolase_C	0.96
PF04542	Sigma70_r2	0.96
PF00440	TetR_N	0.96
PF01740	STAS	0.96
PF02518	HATPase_c	0.96
PF01654	Cyt_bd_oxida_I	0.96
PF07724	AAA_2	0.96
PF03707	MHYT	0.96
PF07690	MFS_1	0.96
PF00456	Transketolase_N	0.96
PF00196	GerE	0.96
PF13620	CarboxypepD_reg	0.96
PF00072	Response_reg	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	4.81
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.96
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.96
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG3300	MHYT domain, NO-binding membrane sensor	Signal transduction mechanisms [T]	0.96
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.96
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.96
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
All Organisms	root	All Organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
cellular organisms	root	All Organisms → cellular organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.92 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.92 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.54 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	2.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	4.81 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	3.85 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	2.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.96 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	4.81 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	3.85 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	2.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.96 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	4.81 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	3.85 %
Rhizobium etli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli	2.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.96 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	4.81 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	3.85 %
Rhizobium etli 8C-3	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli 8C-3	2.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.92 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.96 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.96 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_103509652	Not Available	607	Open in IMG/M
3300000955\|JGI1027J12803_103711356	Not Available	513	Open in IMG/M
3300000955\|JGI1027J12803_104400439	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300000955\|JGI1027J12803_106328948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	556	Open in IMG/M
3300004091\|Ga0062387_100934867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli 8C-3	659	Open in IMG/M
3300004092\|Ga0062389_102699026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli 8C-3	662	Open in IMG/M
3300004268\|Ga0066398_10145346	Not Available	591	Open in IMG/M
3300005332\|Ga0066388_100153683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2883	Open in IMG/M
3300005332\|Ga0066388_107787236	Not Available	536	Open in IMG/M
3300005445\|Ga0070708_100682115	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300005546\|Ga0070696_100252736	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300005549\|Ga0070704_101908100	Not Available	551	Open in IMG/M
3300006854\|Ga0075425_102556769	Not Available	565	Open in IMG/M
3300006914\|Ga0075436_100084119	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300006969\|Ga0075419_11287960	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300007265\|Ga0099794_10410803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300009092\|Ga0105250_10237568	Not Available	776	Open in IMG/M
3300009176\|Ga0105242_11405805	Not Available	725	Open in IMG/M
3300009177\|Ga0105248_11308710	Not Available	820	Open in IMG/M
3300009177\|Ga0105248_13036628	Not Available	534	Open in IMG/M
3300009551\|Ga0105238_11080952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	824	Open in IMG/M
3300009792\|Ga0126374_10839155	Not Available	706	Open in IMG/M
3300010043\|Ga0126380_10055962	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300010043\|Ga0126380_10855621	Not Available	750	Open in IMG/M
3300010046\|Ga0126384_11606571	Not Available	612	Open in IMG/M
3300010047\|Ga0126382_10487307	Not Available	987	Open in IMG/M
3300010047\|Ga0126382_11294420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	659	Open in IMG/M
3300010048\|Ga0126373_11115790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	855	Open in IMG/M
3300010048\|Ga0126373_12072329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	631	Open in IMG/M
3300010358\|Ga0126370_10033742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3112	Open in IMG/M
3300010358\|Ga0126370_10985667	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010358\|Ga0126370_11884969	Not Available	581	Open in IMG/M
3300010358\|Ga0126370_12349917	Not Available	528	Open in IMG/M
3300010360\|Ga0126372_11137342	Not Available	801	Open in IMG/M
3300010360\|Ga0126372_11533322	Not Available	703	Open in IMG/M
3300010360\|Ga0126372_11657793	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300010360\|Ga0126372_12399853	Not Available	578	Open in IMG/M
3300010360\|Ga0126372_12499821	Not Available	567	Open in IMG/M
3300010361\|Ga0126378_11596627	Not Available	740	Open in IMG/M
3300010366\|Ga0126379_10226798	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300010366\|Ga0126379_11963334	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300010376\|Ga0126381_102186275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	796	Open in IMG/M
3300010376\|Ga0126381_102255226	Not Available	782	Open in IMG/M
3300010398\|Ga0126383_10984989	Not Available	931	Open in IMG/M
3300010401\|Ga0134121_11081322	Not Available	793	Open in IMG/M
3300012205\|Ga0137362_10970262	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012971\|Ga0126369_11211181	Not Available	845	Open in IMG/M
3300012971\|Ga0126369_13338258	Not Available	526	Open in IMG/M
3300012971\|Ga0126369_13528935	Not Available	512	Open in IMG/M
3300013104\|Ga0157370_11294666	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300016270\|Ga0182036_10970752	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300016341\|Ga0182035_10451367	Not Available	1090	Open in IMG/M
3300016341\|Ga0182035_11342486	Not Available	641	Open in IMG/M
3300016341\|Ga0182035_11350559	Not Available	639	Open in IMG/M
3300016371\|Ga0182034_12003953	Not Available	512	Open in IMG/M
3300016404\|Ga0182037_10909650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	763	Open in IMG/M
3300016404\|Ga0182037_11994865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	521	Open in IMG/M
3300016422\|Ga0182039_10357231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1228	Open in IMG/M
3300016445\|Ga0182038_11220160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	671	Open in IMG/M
3300021046\|Ga0215015_10602324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli 8C-3	575	Open in IMG/M
3300021171\|Ga0210405_10018517	All Organisms → cellular organisms → Bacteria	5685	Open in IMG/M
3300021361\|Ga0213872_10327487	Not Available	632	Open in IMG/M
3300021478\|Ga0210402_10707891	Not Available	930	Open in IMG/M
3300021560\|Ga0126371_10926221	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300021560\|Ga0126371_13237570	Not Available	550	Open in IMG/M
3300025924\|Ga0207694_10917559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	741	Open in IMG/M
3300025939\|Ga0207665_11521142	Not Available	532	Open in IMG/M
3300025942\|Ga0207689_10613566	Not Available	915	Open in IMG/M
3300026088\|Ga0207641_11855447	Not Available	604	Open in IMG/M
3300031545\|Ga0318541_10169321	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300031546\|Ga0318538_10125354	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300031564\|Ga0318573_10286925	Not Available	880	Open in IMG/M
3300031573\|Ga0310915_10315081	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300031640\|Ga0318555_10403612	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031682\|Ga0318560_10211685	Not Available	1037	Open in IMG/M
3300031723\|Ga0318493_10382455	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300031751\|Ga0318494_10644480	Not Available	620	Open in IMG/M
3300031781\|Ga0318547_10846511	Not Available	570	Open in IMG/M
3300031782\|Ga0318552_10559732	Not Available	584	Open in IMG/M
3300031795\|Ga0318557_10555637	Not Available	527	Open in IMG/M
3300031819\|Ga0318568_10797754	Not Available	586	Open in IMG/M
3300031833\|Ga0310917_10173693	Not Available	1432	Open in IMG/M
3300031896\|Ga0318551_10680838	Not Available	595	Open in IMG/M
3300031910\|Ga0306923_12231063	Not Available	548	Open in IMG/M
3300031912\|Ga0306921_10818848	All Organisms → cellular organisms → Bacteria → Acidobacteria	1062	Open in IMG/M
3300031942\|Ga0310916_10935585	Not Available	725	Open in IMG/M
3300031946\|Ga0310910_10079509	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300031946\|Ga0310910_10756751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	766	Open in IMG/M
3300031946\|Ga0310910_10919703	Not Available	686	Open in IMG/M
3300031954\|Ga0306926_10970917	Not Available	1013	Open in IMG/M
3300031954\|Ga0306926_12745190	Not Available	533	Open in IMG/M
3300031962\|Ga0307479_10664406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300032001\|Ga0306922_10297808	Not Available	1732	Open in IMG/M
3300032001\|Ga0306922_12425449	Not Available	500	Open in IMG/M
3300032042\|Ga0318545_10139973	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300032059\|Ga0318533_10298628	Not Available	1168	Open in IMG/M
3300032059\|Ga0318533_11332994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	524	Open in IMG/M
3300032076\|Ga0306924_12613739	Not Available	503	Open in IMG/M
3300032091\|Ga0318577_10452601	Not Available	613	Open in IMG/M
3300032174\|Ga0307470_10642437	Not Available	800	Open in IMG/M
3300032174\|Ga0307470_11436731	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300032180\|Ga0307471_101681012	Not Available	789	Open in IMG/M
3300032828\|Ga0335080_11407645	Not Available	693	Open in IMG/M
3300033290\|Ga0318519_10796683	Not Available	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.58%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.58%
Freshwater	Environmental → Aquatic → Freshwater	1.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1035096522	3300000559	Soil	VGNSLAAESLLSLAVAVTSEHRVESALQRIVEGLAAQPGVALS
JGI1027J12803_1037113561	3300000955	Soil	VGTSLAAEPLLALAVTVTSEQRVDSVLHSIVQGLASQP
JGI1027J12803_1044004392	3300000955	Soil	VRSVVKTSLEAEQLLSIAVTVTSEQRVESVLQRTVQG
JGI1027J12803_1063289481	3300000955	Soil	VGTSLAAEPLLALAVTVTSEQHVDSVLASIVEGLA
Ga0062387_1009348671	3300004091	Bog Forest Soil	MVNLVETSLTAEPLLSLAVNVTSEHRVDSVLQSIVQGLASQPGV
Ga0062389_1026990261	3300004092	Bog Forest Soil	MVNLVETSLTAEPLLSLAVNVTSEHRVDSVLQSIVQGLASQPGVA
Ga0066398_101453461	3300004268	Tropical Forest Soil	VGTSLAAEPLLALAVTVTSEQRVDSVLQSIVQGLASQPGV
Ga0066388_1001536833	3300005332	Tropical Forest Soil	VGTSLAAEPLLALAVTVTSEQQVDSVLHSIVQGLASQPGVAL
Ga0066388_1077872361	3300005332	Tropical Forest Soil	VGSSLAAEPLLALAVTVTSEQQVDSVLHSIVQGLASQPGVAL
Ga0070708_1006821152	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSLAAEPLLSLAVTVTSEQRVESVLRNIVQGLASQPGVALT
Ga0070696_1002527361	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSTPPATSLAAESLLSLAVTVTSEQYVESVLHSIVDGLAAQPGVA
Ga0070704_1019081001	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VGNSLAAEPLLALAVTVTSEQRVDSVLQSIVQGLASQPGVA
Ga0075425_1025567692	3300006854	Populus Rhizosphere	VGNSLAAEPLLALAVTVTSEQRVDSVLQSIVQGLASQPGVAL
Ga0075436_1000841191	3300006914	Populus Rhizosphere	VGTSLAAEPLLALAVTVTSEQRVDSVLRSIVQGLASQPGVA
Ga0075419_112879601	3300006969	Populus Rhizosphere	MESSLEAERLLSIAVTVTSEQRLESVLQRTVQGLAAQPGVA
Ga0099794_104108031	3300007265	Vadose Zone Soil	MSLAAEPLLSLAVTVTSEQRVESVLRNIVQGLASQPGV
Ga0105250_102375681	3300009092	Switchgrass Rhizosphere	VVTSLAPEPLLALAVTVTSEQQVDSVLQSIVQGLASQP
Ga0105242_114058051	3300009176	Miscanthus Rhizosphere	VSTPPATSLAAESLLSLAVTVTSEQYVESVLHSIVDGLAAQ
Ga0105248_113087101	3300009177	Switchgrass Rhizosphere	VGNSLAPEPLLALAVTVTSEQQVDSVLQSIVQGLASQPGV
Ga0105248_130366281	3300009177	Switchgrass Rhizosphere	MGNALAAEPLLALAVTVTSEQRVDSVLQSIVQGLASQ
Ga0105238_110809522	3300009551	Corn Rhizosphere	VRTSLAAEPLLALAVTVTSEQHVDSVLASIVEGLASQ
Ga0126374_108391551	3300009792	Tropical Forest Soil	VGTSTGRATSLTAEPLLSLAVTVTSEQRVESVLQSIV
Ga0126380_100559623	3300010043	Tropical Forest Soil	VGTSLAAEPLLALAVTVTAEQRVDSVLQSIVQGLA
Ga0126380_108556211	3300010043	Tropical Forest Soil	MSTPRATSLAAESLLSLAVTVTSEQQVEPVLQSIVQGL
Ga0126384_116065711	3300010046	Tropical Forest Soil	MSTPPARSLAAEALLSLAVTITSEQRVESVLQAIVHGLASQPGV
Ga0126382_104873071	3300010047	Tropical Forest Soil	MSTPPATSLAAESLLSLAVTVTSEQRVEPVLQSIVQGLAS
Ga0126382_112944201	3300010047	Tropical Forest Soil	VGTSLAAERLLALAVTVTSEQRVDSVLQSIVQGLASQPG
Ga0126373_111157902	3300010048	Tropical Forest Soil	VGTSLSAEPLLSLAVTVTSEQRVEPVLQSIVEGLAA
Ga0126373_120723292	3300010048	Tropical Forest Soil	VGTSLAAEPLLALAVTVTSEQRVDSVLQSIVHGLASQ
Ga0126370_100337425	3300010358	Tropical Forest Soil	MSTPPATSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAA
Ga0126370_109856671	3300010358	Tropical Forest Soil	LAAESLLSLAVTVTSEQRVDSVLQSIVQGLAAQPGMAL
Ga0126370_118849691	3300010358	Tropical Forest Soil	VGASLTAESLLSLAVTVTSEQRVESVLQSIVQGLAAQPGMALA
Ga0126370_123499172	3300010358	Tropical Forest Soil	VGTSLTAEPLLTLAVTVTSEQRVESVLQSIVQGLASQPGVA
Ga0126372_111373421	3300010360	Tropical Forest Soil	VGSSLAAESLLSLAVTVTSEQRVESVLHSIVQGLASQPE
Ga0126372_115333221	3300010360	Tropical Forest Soil	VGTPTRLATSLAAGPLLSLAVSVTSEQCVESVLQSIVQGLASQ
Ga0126372_116577932	3300010360	Tropical Forest Soil	VRTSLAAERLLGLAVSVTSEQRVASVLQSIVQGLASQPGV
Ga0126372_123998531	3300010360	Tropical Forest Soil	VGTSTGPARSLAAEPLLSLAVTVTSEQRVESVLQGIVQGLALQPG
Ga0126372_124998211	3300010360	Tropical Forest Soil	MSRPSATSLTAESLLSLAVAVTSEQHVESVLQSIVQGLA
Ga0126378_115966272	3300010361	Tropical Forest Soil	VGTSLAAEPLLSLAVTVTSEQRVESVLQSIVQGLASQ
Ga0126379_102267981	3300010366	Tropical Forest Soil	MSAPPATSLAVDSLLSLAVTVTSEQRVESVLQSIVQG
Ga0126379_119633341	3300010366	Tropical Forest Soil	VGTSLAAEPLLSLAVTVTSEQRVDSVLQSIVRGLA
Ga0126381_1021862751	3300010376	Tropical Forest Soil	LREGFVGTSLSAEPLLSLAVTVTSEQRVEPVLKSIVEGLAAQPGVA
Ga0126381_1022552263	3300010376	Tropical Forest Soil	VGTSLAAEPLLALAVTVTSEQRVDSVLQSIVQGLAAQPGVALA
Ga0126383_109849891	3300010398	Tropical Forest Soil	MSTPSATSLAVDSLLSLAVTVTSEQRVESVLQSIVQGLASQPG
Ga0134121_110813222	3300010401	Terrestrial Soil	VGTSLAAEPLLALAVTVTSEQRVDSVLHSIVQGLAS
Ga0137362_109702621	3300012205	Vadose Zone Soil	VDTPLAAEPLLSLAVSVTSEQRVQSVLKKIVEGLASQPGVA
Ga0126369_112111812	3300012971	Tropical Forest Soil	MVGTSLAAEPLLALAVTVTSEQRVDSVLQSIVQGLASQPGV
Ga0126369_133382582	3300012971	Tropical Forest Soil	VGTSLAAESLLSLAVTVTSEQRVDSVLRSIVQGLV
Ga0126369_135289351	3300012971	Tropical Forest Soil	MSAPPATSLAAGSLLSLAVTVTAEQRVESVLQSIVQGLASQAG
Ga0157370_112946662	3300013104	Corn Rhizosphere	VETSITAGPLLSLAVTVTAEQHVESVLRKIVEGLASQP
Ga0182036_109707521	3300016270	Soil	VGTSLSAEPLLSLAVTVTSEQRVEPVLQSIVEGLAAQPG
Ga0182035_104513672	3300016341	Soil	MRSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAT
Ga0182035_113424861	3300016341	Soil	VGTSLAAESLLSLAVAVTSEQRVEPVLQSIVQGLASQ
Ga0182035_113505591	3300016341	Soil	MGSSLAAESLLSLAVTVTSEQRAESVLQSIDQGLAAQPGMALARI
Ga0182034_120039531	3300016371	Soil	VGTSLAAEPLLALAVTVTSKHRVESVLLSRVQRSAAQP
Ga0182037_109096501	3300016404	Soil	VGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQPGMALA
Ga0182037_119948651	3300016404	Soil	VGTSLSAEPLLSLAVTVTSEQRVESVLQSIVQGLAAQPG
Ga0182039_103572311	3300016422	Soil	VGTSLSAEPLLSLAVTVTSEQRVEPVLQSIVQGLAAQPGVAL
Ga0182038_112201601	3300016445	Soil	VGSSLAAESLLSLAVSVTSEQRVESVLQSIVQGLASQ
Ga0215015_106023242	3300021046	Soil	VETSLAPEPLLSLAVLVTAEHRVDPVLQKIVQGLAAEPG
Ga0210405_100185176	3300021171	Soil	VGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQPGMALARI
Ga0213872_103274872	3300021361	Rhizosphere	VGASLAAEPLLALAVTVTSEVRVDSVLKSIVQGLASQPGVALA
Ga0210402_107078911	3300021478	Soil	VGSSLAAESLLSLAVTVTSEQRVESVLQSTVQGLAAQPGMAL
Ga0126371_109262212	3300021560	Tropical Forest Soil	VGTSLAAEPLLALAVTVTSEQRVDSVLQSIVQGLA
Ga0126371_132375701	3300021560	Tropical Forest Soil	VGTSTRPATSLAAESLLSLAVTVTSEQRVESVLQSIV
Ga0207694_109175592	3300025924	Corn Rhizosphere	VRTSLAAEPLLALAVTVTSEQHVDSVLASIVEGLAS
Ga0207665_115211421	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VSMLPATSLAADALLSLAVTVTSEQYVESVLHIIVDGLAAQ
Ga0207689_106135662	3300025942	Miscanthus Rhizosphere	VVTSLAPEPLLALAVTVTSEQQVDSVLQSIVQGLA
Ga0207641_118554471	3300026088	Switchgrass Rhizosphere	VGSSLAPEPLLALAVTVTSEQQVDSVLQSIVQGLASQPGVAL
Ga0318541_101693211	3300031545	Soil	MSTPPVTSLAAEPLLSLAVTVTSEQRVESVLQSIVRGLAAQ
Ga0318538_101253542	3300031546	Soil	VGTSLAAEPLLALAVTVTSEQRVDSVLQSIVQGLASQPGVA
Ga0318573_102869252	3300031564	Soil	VGTSLAAEPLLALAVTVTSEQQVDSVLQSIVQGLASQP
Ga0310915_103150811	3300031573	Soil	VGTSLAAEPLLSLAVTVTSEQRVESVLQSIVHGLAS
Ga0318555_104036122	3300031640	Soil	VGTSTRPATSLTAESLLSLAVTVTSEQRVESALQSIVHGL
Ga0318560_102116853	3300031682	Soil	MSTPPVTSLAAEPLLSLAVTVTSEQRVESVLQSIVR
Ga0318493_103824552	3300031723	Soil	VGTSTRPATSLTAESLLSLAVTVTSEQRVESALQSIVHG
Ga0318494_106444801	3300031751	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQPG
Ga0318547_108465111	3300031781	Soil	MRSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQPGMALA
Ga0318552_105597321	3300031782	Soil	VGTSLSAEPLLSLAVTVTSEQRVEPVLKSIVEGLAAQ
Ga0318557_105556371	3300031795	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLASQPGMA
Ga0318568_107977542	3300031819	Soil	VGTSTRPATSLTAESLLSLAVTVTSEQRVESALQS
Ga0310917_101736931	3300031833	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQPGMAL
Ga0318551_106808381	3300031896	Soil	VGTSTRPATSLTAESLLSLAVTVTSEQRVESALQSIV
Ga0306923_122310631	3300031910	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQLG
Ga0306921_108188481	3300031912	Soil	VGTSLEAELLLSIAVTITSEQRVESVLQKTVQGLAAQP
Ga0310916_109355851	3300031942	Soil	VGTSLSAEPLLSLAVTVTSEQRVEPVLQSIVEGLAAQPGVA
Ga0310910_100795091	3300031946	Soil	VGTSLAAEPLLSLAVAVTSQQRVESVLQSIVQGLASQP
Ga0310910_107567512	3300031946	Soil	VGTSLSAEPLLSLAVTVTSEQRVEPVLKSIVEGLAAQP
Ga0310910_109197031	3300031946	Soil	MGSSMAAESLLSLAVTVTSEQRVESVLQSIVQGLASQPGVA
Ga0306926_109709171	3300031954	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQPGM
Ga0306926_127451901	3300031954	Soil	VGTSLSAEPLLSLAVTVTSEQRVEPVLQSIVEGLA
Ga0307479_106644061	3300031962	Hardwood Forest Soil	VDTSLAAEPLLSLAVTVTSEQRVESVLRNIVQGLAS
Ga0306922_102978081	3300032001	Soil	VGTSLAAEPLLSLAVTVTSEQRVESVLLSIVQGLASQ
Ga0306922_124254491	3300032001	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQPGMALARI
Ga0318545_101399732	3300032042	Soil	VGTSTRPATSLTAESLLSLAVTVTSEQRVESALQSI
Ga0318533_102986281	3300032059	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVEGLA
Ga0318533_113329942	3300032059	Soil	VGTSLSAEPLLSLAVTVTSEQRVESVLQSIVQGLAAQPGMA
Ga0306924_126137391	3300032076	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAA
Ga0318577_104526011	3300032091	Soil	VATSLSAEPLLSLAVTVTSEQRVEPVLKSIVEGLAAQP
Ga0307470_106424371	3300032174	Hardwood Forest Soil	VGTSLSAEPLLALAVTVTSEQHVDSVLQSIVQGLASQPG
Ga0307470_114367311	3300032174	Hardwood Forest Soil	MSTPPTTSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAS
Ga0307471_1016810122	3300032180	Hardwood Forest Soil	VSTPPATSLAAESLLSLAVTVTSEQYVESVFHSIVDGLAAQPGVA
Ga0335080_114076451	3300032828	Soil	VRTSLAAEPLLALAVTVTSEQCVDSVLQSIVQGLASQPGVAL
Ga0318519_107966831	3300033290	Soil	MGSSLAAESLLSLAVTVTSEQRVESVLQSIVQGLAAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096781

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences