Metagenome / Metatranscriptome Family F096772

Basic Information
Family ID	F096772
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	81 residues
Representative Sequence	MTRLLFATLLCALGTTQASAQTVVSQGLLELDDDERNASFTLMLRDSDRRCDQVIRTLFTGTVLGVDEWEALCKDRNAYSISVLVE
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.00 %
% of genes near scaffold ends (potentially truncated)	85.58 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (70.192 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.577 % of family members)
Environment Ontology (ENVO)	Unclassified (29.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.192 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.53% β-sheet: 0.00% Coil/Unstructured: 39.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00171	Aldedh	2.88
PF13424	TPR_12	1.92
PF00719	Pyrophosphatase	0.96
PF13676	TIR_2	0.96
PF00196	GerE	0.96
PF04392	ABC_sub_bind	0.96
PF03797	Autotransporter	0.96
PF13011	LZ_Tnp_IS481	0.96
PF02798	GST_N	0.96
PF03734	YkuD	0.96
PF13844	Glyco_transf_41	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	2.88
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	2.88
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	2.88
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.96
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.96
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
All Organisms	root	All Organisms	29.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
cellular organisms	root	All Organisms → cellular organisms	29.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	15.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.92 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.46 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.92 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.46 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.92 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.96 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.46 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.92 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.96 %
Bradyrhizobium sp. sGM-13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004081\|Ga0063454_101427061	Not Available	588	Open in IMG/M
3300004479\|Ga0062595_101911641	Not Available	569	Open in IMG/M
3300005160\|Ga0066820_1007482	Not Available	673	Open in IMG/M
3300005328\|Ga0070676_11449441	Not Available	528	Open in IMG/M
3300005335\|Ga0070666_11118723	Not Available	586	Open in IMG/M
3300005340\|Ga0070689_100767324	Not Available	846	Open in IMG/M
3300005364\|Ga0070673_101882419	Not Available	567	Open in IMG/M
3300005366\|Ga0070659_100906731	Not Available	770	Open in IMG/M
3300005439\|Ga0070711_100321358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300005456\|Ga0070678_101498748	Not Available	632	Open in IMG/M
3300005459\|Ga0068867_100412051	Not Available	1142	Open in IMG/M
3300005713\|Ga0066905_100403558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1109	Open in IMG/M
3300005764\|Ga0066903_103606686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300005764\|Ga0066903_104693321	Not Available	727	Open in IMG/M
3300005842\|Ga0068858_101817926	Not Available	602	Open in IMG/M
3300005844\|Ga0068862_102685691	Not Available	510	Open in IMG/M
3300006038\|Ga0075365_10177026	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300006871\|Ga0075434_101483032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300009092\|Ga0105250_10441858	Not Available	582	Open in IMG/M
3300009094\|Ga0111539_10721905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1160	Open in IMG/M
3300009176\|Ga0105242_13185560	Not Available	509	Open in IMG/M
3300009553\|Ga0105249_10375288	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300010373\|Ga0134128_12459887	Not Available	574	Open in IMG/M
3300010396\|Ga0134126_11561738	Not Available	726	Open in IMG/M
3300010397\|Ga0134124_12266558	Not Available	583	Open in IMG/M
3300010399\|Ga0134127_10970420	Not Available	908	Open in IMG/M
3300010403\|Ga0134123_12086236	Not Available	627	Open in IMG/M
3300011444\|Ga0137463_1270168	Not Available	630	Open in IMG/M
3300012683\|Ga0137398_10177114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1397	Open in IMG/M
3300012912\|Ga0157306_10298308	Not Available	590	Open in IMG/M
3300012925\|Ga0137419_10731889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300012955\|Ga0164298_10469393	Not Available	833	Open in IMG/M
3300012957\|Ga0164303_10267156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300012957\|Ga0164303_10713040	Not Available	678	Open in IMG/M
3300012985\|Ga0164308_10957673	Not Available	758	Open in IMG/M
3300012986\|Ga0164304_11422954	Not Available	570	Open in IMG/M
3300012986\|Ga0164304_11676115	Not Available	531	Open in IMG/M
3300013307\|Ga0157372_11507249	Not Available	775	Open in IMG/M
3300013308\|Ga0157375_10988279	Not Available	982	Open in IMG/M
3300014968\|Ga0157379_11919434	Not Available	584	Open in IMG/M
3300015241\|Ga0137418_10534066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300015371\|Ga0132258_10285774	All Organisms → cellular organisms → Bacteria	4050	Open in IMG/M
3300015372\|Ga0132256_100237967	Not Available	1884	Open in IMG/M
3300015372\|Ga0132256_102388268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300015373\|Ga0132257_100838682	Not Available	1149	Open in IMG/M
3300015374\|Ga0132255_100046093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5643	Open in IMG/M
3300015374\|Ga0132255_102366320	Not Available	811	Open in IMG/M
3300018000\|Ga0184604_10055659	Not Available	1108	Open in IMG/M
3300018028\|Ga0184608_10366115	Not Available	631	Open in IMG/M
3300018051\|Ga0184620_10025779	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300018073\|Ga0184624_10095129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1269	Open in IMG/M
3300018073\|Ga0184624_10359048	Not Available	652	Open in IMG/M
3300018076\|Ga0184609_10219988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	887	Open in IMG/M
3300018082\|Ga0184639_10187321	Not Available	1099	Open in IMG/M
3300018469\|Ga0190270_10089579	Not Available	2316	Open in IMG/M
3300018469\|Ga0190270_11198528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300019869\|Ga0193705_1020542	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300019873\|Ga0193700_1064700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300020015\|Ga0193734_1056701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300021080\|Ga0210382_10021682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2328	Open in IMG/M
3300021968\|Ga0193698_1018563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300025899\|Ga0207642_10237540	Not Available	1027	Open in IMG/M
3300025917\|Ga0207660_11389193	Not Available	569	Open in IMG/M
3300025934\|Ga0207686_11627684	Not Available	533	Open in IMG/M
3300025960\|Ga0207651_11872943	Not Available	540	Open in IMG/M
3300025972\|Ga0207668_11442229	Not Available	621	Open in IMG/M
3300026498\|Ga0257156_1125365	Not Available	535	Open in IMG/M
3300027181\|Ga0208997_1016403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1024	Open in IMG/M
3300027383\|Ga0209213_1107624	Not Available	514	Open in IMG/M
3300027738\|Ga0208989_10003117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5466	Open in IMG/M
3300027738\|Ga0208989_10215583	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027738\|Ga0208989_10241342	Not Available	590	Open in IMG/M
3300028712\|Ga0307285_10129508	Not Available	682	Open in IMG/M
3300028718\|Ga0307307_10180333	Not Available	665	Open in IMG/M
3300028718\|Ga0307307_10218621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300028720\|Ga0307317_10269267	Not Available	575	Open in IMG/M
3300028722\|Ga0307319_10009093	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300028771\|Ga0307320_10353750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300028778\|Ga0307288_10298178	Not Available	641	Open in IMG/M
3300028782\|Ga0307306_10126159	Not Available	698	Open in IMG/M
3300028784\|Ga0307282_10197391	Not Available	961	Open in IMG/M
3300028791\|Ga0307290_10149217	Not Available	856	Open in IMG/M
3300028793\|Ga0307299_10138789	Not Available	913	Open in IMG/M
3300028803\|Ga0307281_10110996	Not Available	931	Open in IMG/M
3300028811\|Ga0307292_10072952	Not Available	1317	Open in IMG/M
3300028819\|Ga0307296_10017788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	3727	Open in IMG/M
3300028819\|Ga0307296_10147124	Not Available	1271	Open in IMG/M
3300028819\|Ga0307296_10324140	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300028819\|Ga0307296_10355926	Not Available	799	Open in IMG/M
3300028828\|Ga0307312_11011540	Not Available	550	Open in IMG/M
3300028872\|Ga0307314_10075053	Not Available	888	Open in IMG/M
3300028872\|Ga0307314_10083309	Not Available	851	Open in IMG/M
3300028875\|Ga0307289_10118051	Not Available	1086	Open in IMG/M
3300030902\|Ga0308202_1124835	Not Available	553	Open in IMG/M
3300031152\|Ga0307501_10291415	Not Available	500	Open in IMG/M
3300031720\|Ga0307469_10406269	Not Available	1165	Open in IMG/M
3300031908\|Ga0310900_11143486	Not Available	646	Open in IMG/M
3300032013\|Ga0310906_10265421	Not Available	1079	Open in IMG/M
3300032180\|Ga0307471_100542379	Not Available	1317	Open in IMG/M
3300032205\|Ga0307472_101722891	Not Available	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.04%
Host-Associated	Host-Associated	25.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.42%
Plants	Host-Associated → Plants	25.96%
Aquatic	Environmental → Aquatic	9.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.35%
Sediment	Environmental → Aquatic → Sediment	8.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.65%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.92%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.58%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063454_1014270612	3300004081	Soil	MTRLLFATLLCALGTTQASAQTVVSQGLLELDDDERNASFTLILRDSDRRCDQVIRTLFTGTV
Ga0062595_1019116411	3300004479	Soil	LTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDEWEALCKDRNAYSISVLVEPDGTTITSLTCR
Ga0066820_10074822	3300005160	Soil	MTRLLLATLLCALGTTQASTQNVVTQGLLELDDEERNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTPTRLASL*
Ga0070676_114494411	3300005328	Miscanthus Rhizosphere	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDEWEALCKDRNA
Ga0070666_111187232	3300005335	Switchgrass Rhizosphere	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLG
Ga0070689_1007673241	3300005340	Switchgrass Rhizosphere	MPWAATLLFTTLLCALGVAQASAQNAVSQRLLEFDAAQRNAAFTIMLNESNRRCDQVMRTLFSGSILGVDEWEAACNDQNAYSVSV
Ga0070673_1018824191	3300005364	Switchgrass Rhizosphere	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDEWEALCKNRNAYSISVLVEPDGTTIT
Ga0070659_1009067311	3300005366	Corn Rhizosphere	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDEWEALCKDRNAYSISVLVEPDGTTIT
Ga0070711_1003213582	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLFTTLLCALGMAQASAQTSVSQQLLELNDDERNGAFTSMLWDGHGKCDQVVRTLLKSTVLDVDEWEAVCRDRRSYASSILVDADETMTLS*
Ga0070678_1014987482	3300005456	Miscanthus Rhizosphere	MTRLLLATLLCAFGTTQASAQTVVSQGLLELDDDERNASFTLMLRDSDRRCDQVIRTLFTGSVLGVDEWDALCKDRNSYSISVLVEPDETT
Ga0068867_1004120511	3300005459	Miscanthus Rhizosphere	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDEWEALCKDRNAYS
Ga0066905_1004035582	3300005713	Tropical Forest Soil	MSRLLFATVLWTLGIAQAAAQSEVSQRLLELEDDERNAAFTLILKDSNRKCDQVIRTLFKGTAVGLDEWEAMCRDRNAYSLSVLAQGNETIIN
Ga0066903_1036066862	3300005764	Tropical Forest Soil	MSRLLFATVLWTLGIAQAAAQSEVSQRLLELEDDERNAAFTLILKDSNRKCDQVIRTLFKGTAVGLDEWEAMCRDRNAYSLSVLAQGNETIINAVSCRE
Ga0066903_1046933211	3300005764	Tropical Forest Soil	MSRLLFATVFWTLGFAQAAAQSEMSQRLLELEDDERNAAFTLILKDSNRKCDQVIRTLFKGTVVGLDEWEAMCRDRNAY
Ga0068858_1018179262	3300005842	Switchgrass Rhizosphere	MPWAATLLFTTLLCALGVAQASAQNAVSQRLLEFDAAQRNAAFTIMLNESNRRCDQVMRTLFSGSILGVDEWEAACNDQNAYSVSVLSESNEAIIT
Ga0068862_1026856911	3300005844	Switchgrass Rhizosphere	MPWAATLLFTTLLCALGVAQASAQNAVSQRLLEFDAAQRNAAFTIMLNESNRRCDQVMRTLFSGSVLGVDEWEASCGDQ
Ga0075365_101770265	3300006038	Populus Endosphere	MSRLLFATVFWTLGFAQAAAQSDVSHRLLELEDDERNAAFTLILKDSNRKCDQVIRTLFKGTVVGLDEWEAMCRDRNAYSLSVLAQGNET
Ga0075434_1014830321	3300006871	Populus Rhizosphere	MMRLLLPTLLCVLGTAQGYAQREVSLHLLELADDERNAAFTLMLRDSNRKCNQVIRTLFKGTILGVDEWEALCRDRNSY
Ga0099795_106417331	3300007788	Vadose Zone Soil	MKWVLFTMLLCAVGPTQASAQNEISQQLLELDQDQRNAAFTHMLWDSNRKCDQVIRTLFN
Ga0105250_104418581	3300009092	Switchgrass Rhizosphere	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGMDEWEPLCNNRNAYS
Ga0111539_107219053	3300009094	Populus Rhizosphere	LATLLCALGTTQASAQNVVSQGLLELNDEERNASFTLLLRDSDRRCDQVTRTLFTCTLLGVDEWEALCKD*
Ga0105242_131855601	3300009176	Miscanthus Rhizosphere	TRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLMLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTPTRLASL*
Ga0105249_103752882	3300009553	Switchgrass Rhizosphere	MTRLALATLLCALGTTQASAQNVVSQGLLELDDEERNASFTLLLRDSDRRCDQVIRTLFTGTLLGVDEW
Ga0134128_124598871	3300010373	Terrestrial Soil	MTRLLFATLLCALGITQASAQTVVSQGLLELGYNERNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTSTRLASL*
Ga0134126_115617382	3300010396	Terrestrial Soil	MTRLLLATLLCAFGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDEWEALCKDRNAYSISVLVEPDGTTITSL
Ga0134124_122665581	3300010397	Terrestrial Soil	MTRLALATLLCALGTTQASAQNVVSQGLLELDDEERNASFTLLLRDSDRRCDQVIRTLFTGTLLGVD
Ga0134127_109704202	3300010399	Terrestrial Soil	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDGRCDQVIRTLFTGTLLGVDEWEALCKDRNAYSISVLVEPDGT
Ga0134123_120862361	3300010403	Terrestrial Soil	MTRLLLATLLCAFGTTQASAQTVVSQGLLELGYNERNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTPTRLASL*
Ga0137463_12701682	3300011444	Soil	MTRLMFTALLCALGTAQASSQNVVSQQFLELDDDLRNAAFTLMLRDSNRKCNQVIRTLFNGTVLGVTSGKKASNSGIR
Ga0137398_101771141	3300012683	Vadose Zone Soil	MLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGRRKCDQVVRTLFRGTVLGVDEWEAMCRDRRSYS
Ga0157306_102983082	3300012912	Soil	MTRLLVATLLCALGTTQASAQNVLSQGLLDLDDDERNAYFTLILKESDRRCDQVIRTLFTGTLLGVDEWEALCKDRNAYSISVLVE
Ga0137419_107318892	3300012925	Vadose Zone Soil	MKRVMFAMLLCALGPAQASAQNEVTQLLLEWDEDQRNEAFTHMLWDSDRKCDHVNQTIFNGAFLGVDEWEVLCRDGRSYLVSVLGDL
Ga0164298_104693931	3300012955	Soil	MTRLLLATLLCALGITQASAQTVVSQGLLELGYNERNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTPTRLASL*
Ga0164303_102671562	3300012957	Soil	MKRVLFTMLLCALGPVQASDQNDTSQQLLELEEEQRNAAFTHMLWDSERKCDQVIRTLFNGTVLGVDDWEVLCRDGRSYSIS
Ga0164303_107130402	3300012957	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVLGVDEWEAMCRDRRSYSFTML
Ga0164308_109576731	3300012985	Soil	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDEWEALCKDRIAYSISVLVEPDGTT
Ga0164304_114229541	3300012986	Soil	MLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLRLQDGHRKCEQVVRTLFRRTVLGVDEWEA
Ga0164304_116761151	3300012986	Soil	MTRLLFAMLLCALGAVQASAQNGVSQRLLELDDDERNEAFTMMLRDSSRKCDRVIRTLFNGTVLGVDEWEALC
Ga0157372_115072492	3300013307	Corn Rhizosphere	MPWAATLLFTTLLCALGVAQASAQNAVSQRLLEFDAAQRNAAFTIMLNESNRRCDQVMRTLFSGSILGVDEWEAACNDQNAY
Ga0157375_109882792	3300013308	Miscanthus Rhizosphere	MTRLLFATLLCALGTTQASAQTVVSQGLLELDDDERNASFTLMLRDSDRRCDQVIRTLFTGTVLGVDEWEALCKDRNAYSISVLVE
Ga0157379_119194342	3300014968	Switchgrass Rhizosphere	MTRLLFATLLCALGITQASAQTVVSQGLLELDDNERNASFTLLLRDSDRRCDQVIRTLFTGTI
Ga0137418_105340661	3300015241	Vadose Zone Soil	MRRAMKRVMFAMLLCALGPAQASAQNEVTQLLLEWDEDQRNEAFTHMLWDSDRKCDHVNQTIFNGAFLGVDEWEVLCRDGRSYLVSVLGDL
Ga0132258_102857741	3300015371	Arabidopsis Rhizosphere	RLLLATLLCALGITQASAQTVVSQGLLELGYNEPNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTPTRLASL*
Ga0132256_1002379674	3300015372	Arabidopsis Rhizosphere	VIKPPATNVCGNELVPKERAMTRLLLATLLCAFGTTQASAQTVVSQGLLELDDEERNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTPTRLASL*
Ga0132256_1023882681	3300015372	Arabidopsis Rhizosphere	MKRLLFTALFCVLGPAQASAQNDTSQQLLELEEDQRNAAFTHMLWDSERKCNQVIRTLFNGTLLGVDDWEVICRDRRSYSISVLVEP
Ga0132257_1008386823	3300015373	Arabidopsis Rhizosphere	MTRLAFATLLCALGITQASAQTVVSQGLLELDDEERNASFTLLLRDSDRRCDQVIRTLFTGTLLGVDEWEALCKDRNAYSISVLVEPEGTTITSLTC
Ga0132255_1000460939	3300015374	Arabidopsis Rhizosphere	MTRLLLATLLCALGITQASAQTVVSQGLLELGYNERNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRT
Ga0132255_1023663202	3300015374	Arabidopsis Rhizosphere	LFIVAVKYTYLSAHYVFDGEAPMTRLLCTTLLCALGTAQASAQTLVSQQLLELEDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVLGVDEWEAMCRDRRSYSFTMLAEPDE
Ga0184604_100556591	3300018000	Groundwater Sediment	MTRLALATLLCALGTTQASAQNVVSQGLLELNDEERNASFTLLLRDSDRRCDQVTRTLFTGTLLGVDEWEA
Ga0184608_103661151	3300018028	Groundwater Sediment	LTRLLLATLLCALGTTQASAQNVVSQGLLELDDDERNASFTLMLRDSDRRCDQVIRTLFTGTLLGVDEWEAL
Ga0184620_100257791	3300018051	Groundwater Sediment	MTRLLFTTLLCALGTVQASAQNQVSQQLSELDENERNAAFTLMLRDSNRKCDQVIRTLFNGTVLGVDEWEALCKDRSSYSISVLAELNETIITSLS
Ga0184621_102194131	3300018054	Groundwater Sediment	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGRRKCDQVV
Ga0184624_100951291	3300018073	Groundwater Sediment	LTRLLLATLLCALGTTQASAQNVVSRGLLDLDDDERNASFTLILKESDRRCDQVTRTLFTGTLLGVVEWEALCKDRNAYSISVLVEPDGTTITSLTCR
Ga0184624_103590481	3300018073	Groundwater Sediment	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVLGMDEWEAMCRDRRSY
Ga0184609_102199882	3300018076	Groundwater Sediment	MKWVLFTMLLCAVGPTQASAQNEISQQLLELDQDQRNAAFTRMLWDTKRKCDHVIRTLFNGTVLGVDDWEVLCRD
Ga0184639_101873211	3300018082	Groundwater Sediment	MTRLMFTALLCALGTAQASSQNVVSQQFLELDDDLRNAAFTLMLRDSNRKCNQVIRTLFNGTVLGVTSGKKASNSGIRARTRARVF
Ga0190270_100895794	3300018469	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVLGM
Ga0190270_111985281	3300018469	Soil	MLRLLFTMLLCAVGTAQASAQTAITQQWLELDDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVLGM
Ga0193705_10205422	3300019869	Soil	MTRLLFTTLLCALGTVQASAQNQVSQQLSELDENERNAAFTLMLRDSNRKCDQVIRTLFNGTVLGVDEWEALCKDRSSYSISVLAELNETII
Ga0193700_10647001	3300019873	Soil	MKRVMFAMLLCALGPAQASAQNEVSQLLLEWDEDQRNEAFTHMLWDSDRKCDHVIQTIFNGAFLGVDEWEVLCRDGRSFLVSVLGDLNDT
Ga0193734_10567011	3300020015	Soil	MTRLMFTALLCALGTAQASSQNVVSQQFLELDDDLRNAAFTLMLRDSNRKCNQVIRTLFNGTVLGVDEWEALCRDRNSYSISVLAELNDAII
Ga0210382_100216821	3300021080	Groundwater Sediment	MTRLLFTTLLCALGTVQASAQNQVSQQLSELDEDERNAAFTLMLRDSNRKCDQVIRTLFNGTVLGVDEWEALCKD
Ga0193698_10185631	3300021968	Soil	MTRLMFTALLCALGTAQASSQNVVSQQFLELDDDLRNAAFTLMLRDSNRKCNQVIRTLFNGTVLGVDEWEALCRDRNSYSISVLAELNDAIITSLSYNLTSSGH
Ga0207642_102375401	3300025899	Miscanthus Rhizosphere	LTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGMDEWEALCKDRNAYSISVLVEPDGTTITS
Ga0207660_113891931	3300025917	Corn Rhizosphere	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGMDEWEALCKDR
Ga0207686_116276841	3300025934	Miscanthus Rhizosphere	MTRLLLATLLCALGITQASAQTVVSQGLLELGYNERNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTPTRLASL
Ga0207651_118729432	3300025960	Switchgrass Rhizosphere	ASAQTVVSQGLLELDDDERNASFTLMLKETDRRCDQVIRTLFTGSVLGVDEWEALCKDRNSYSISVLVEPDETTITSLTLLRMSGHL
Ga0207668_114422291	3300025972	Switchgrass Rhizosphere	LTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLG
Ga0257156_11253651	3300026498	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGRRKCDQVVRTLFRGTVLGVDEWEAMCRDRRSYSFTMLAEPDETVISFV
Ga0208997_10164033	3300027181	Forest Soil	MTRLLFTTVLCALCTAHASAQNEVSQKFLELSEDKRNTAFTLVLRESNRKCDQVIRTLFKGTFLGVDDWEALCRDRNSYSFSV
Ga0209213_11076241	3300027383	Forest Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVL
Ga0208993_11010961	3300027480	Forest Soil	MKRVLFTILLCALGPAQASAQNVTSQQLLELDQAQRNAAFAHMLWDSERKCDQVIRTLFNGTV
Ga0208989_100031175	3300027738	Forest Soil	MKWVLFTMLLCAVLGPAQASAQNGISQQLLELDEDQRNAALTHMLWDIKRKCDHVIRTLFNGTVLGVDDWEVLCRD
Ga0208989_102155831	3300027738	Forest Soil	MTRLLFTGLLCALGTAQASAQSEVSQQLLELDDNERNAAFTLMLREGHRKCDQVVRTLFKGTVLGVDEWEAMCRNRISYSFAVLAEPNETMITFVS
Ga0208989_102413422	3300027738	Forest Soil	MKRVLFTILLCALGPAQASAQNDTSRQLLELDEEQRNAAFAHMLWDSERKCDQVIRTLFNGTVLGVDNWEVL
Ga0307285_101295081	3300028712	Soil	MTRLLFTTLLCALGTVQAFAQSEVSQHWLELDDDERNAAFTLMLRDSNRKCDQVTRTLYNGSVLGVDDWEAKCRDRNS
Ga0307307_101803331	3300028718	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVLGVDEWE
Ga0307307_102186212	3300028718	Soil	MKRVMFAMLLCALGPAQASAQNEVSQLLLEWDEDQRNEAFTHMLWDSDRKCDHVIQTIFNGAFLGVDEWEVLCRDGRSFLVSVLGDLNDTIITSLSCSE
Ga0307317_102692671	3300028720	Soil	LATLLCALGTTQASAQNVVSQGLLELDDDERNASFTLMLRDRDRRCDQVIRTLFTGTLLGVDEWEARSAKTETPTRLASWWNRTGPPSHH
Ga0307319_100090934	3300028722	Soil	MTRLLFTTLLCALGTVQASAQNQVSQQLSELDENERNAAFTLMLRDSNRKCDQVIRTLFNGTVLGVDEWEALCKDRSSYSIS
Ga0307320_103537502	3300028771	Soil	MKRVMFAMLLCALGPAQASAQNEVSQLLLEWDEDQRNEAFTHMLWDSDRKCDHVIQTIFNGAFLGVDEWEVLCRDGRSFLVSVLGDLNDTIITSLSC
Ga0307288_102981781	3300028778	Soil	MKWVLFTMLLCAVGPTQASAQNEISQQLLELDQDQRNAAFTHMLWDSTRKCDHVIRTLFNGTVLGV
Ga0307306_101261591	3300028782	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVLGVDEWEAICRDRRSYSFTMLTEPD
Ga0307282_101973911	3300028784	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGRRKCDQVVRTLFRGTVLGVDE
Ga0307290_101492171	3300028791	Soil	VTRLLLATLLCALGTTQASAQNVVSQGLLELDDDERNASFTLMLRDSDRRCDQVIRTLFTGTLLGVDEWEALCKDRNAYSISVLVEPDG
Ga0307299_101387891	3300028793	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNVAFTLMLQDGRRKCDQVVRTLFRGTVLGVDEWEAMCRDRRSYSFTM
Ga0307281_101109962	3300028803	Soil	MTRLMFTALLCALGTAQASSQNVVSQQFLELDDDLRNAAFTLMLRDSNRKCNQVIRTLFNGTVLGVDEWE
Ga0307292_100729523	3300028811	Soil	MKRVMFAMLLCALGPAQASAQNEVSQLLLEWDEDQRNEAFTHMLWDSDRKCDHVIQTIFNDAFLGVDDWEVLCRDGRSYLVS
Ga0307296_100177881	3300028819	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGHRKCDQVVRTLFRGTVLGMDEWEAMCRDRRSYSFS
Ga0307296_101471241	3300028819	Soil	VTRLLLAALLCALGTTQTSAQNVVSQGLLELDDDERNASFTLMLRDSDRWCDQVIRTLFTGTLLGVDEWEARSAKTETPTRLASWWNRTGPPSHH
Ga0307296_103241401	3300028819	Soil	TLLCALGTVQAFAQSEVSQHWLELDDDERNAAFTLMLRDSNRKCDQVTRTLYNGSVLGVDDWEAKCRDRNS
Ga0307296_103559262	3300028819	Soil	MKWVLFTMLLCAVGPTQASAQNEISQQLLELDQDQRNAAFTRMLWDSKRKCDHVIRTLFNGTVLGVDDW
Ga0307312_110115401	3300028828	Soil	MTRLLFTTLLCALGTVQAFAQSEVSQHWLELDDDERNAAFTLMLRDSNRKCDQVTRTLYNGTVLGVDEW
Ga0307314_100750531	3300028872	Soil	MTRLLFATLLCALGTTQASAQSVVSQGLLELDDEERNASFTLILKESDRRCDQVIRTLFTGTVLGVDEWE
Ga0307314_100833092	3300028872	Soil	MTRLLCTMLLCALGTAQASAQTAVSQQLLELEDDERNAAFTLMLQDGRRKCDQVVRTLFRGTVLGVDEWEAMCRDRRSYSFTM
Ga0307289_101180512	3300028875	Soil	MKWVLFTMLLCAVGPTQASAQNEISQQLLELDQDQRNAAFTRMLWDSKRKCDHVIRTLFNGTVLS
Ga0307308_101497491	3300028884	Soil	MKWVLFTMLLCAVGPTQASAQNEISQQLLELDQDQRNAAFTRMLWDSKRKCDHVIRTLF
Ga0308202_11248351	3300030902	Soil	VFDGEARHARLLFTTLLCAFGATQVSAQNLVSQRLLELDDDERNASFTLILKDSDRRCDQVIRTLFNGTILGVDEWEALCKDRKRLLAQRP
Ga0307501_102914151	3300031152	Soil	MKWVLFTMLLCAVGPTQASAQNEISQQLLELDQDQRNAAFTHMLWDSNRKCDQVIRTAFSGTLLGVDDWEVLCRDRRSYSISVLVELELH
Ga0307469_104062692	3300031720	Hardwood Forest Soil	MTRLLLATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDEWEARCKDRNAYSISVL
Ga0310900_111434862	3300031908	Soil	MTRLALATLLCALGTTQASAQNVVSQGLLELDDEERNASFTLLLRDSDRRCDQVIRTLFTGTLLGVDEWEALCKDRNAYSISVLVE
Ga0310906_102654211	3300032013	Soil	MTRLLVATLLCALGTTQASAQTVVSQGLLELGYNERNASFTLLLRDSDRRCDQVIRTLFTGTVLGVDEWKALCKDRTPTRLASL
Ga0307471_1005423793	3300032180	Hardwood Forest Soil	MSSRGARHDAAVATLLCALGTTQASAQNVVSQGLLDLDDDERNASFTLILKESDRRCDQVIRTLFTGTLLGVDDWEALCKKPKRLLD
Ga0307472_1017228911	3300032205	Hardwood Forest Soil	MSRLLFATVLCTLGIAQAAAQSEVSQRLLELEDDERNAAFTLILKDSNRKCDQVIRTLFKGTAVGLDEWEAICRD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096772

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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