Metagenome / Metatranscriptome Family F096771

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096771
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	71 residues
Representative Sequence	MSRSNRREDVLSLQLALERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Number of Associated Samples	66
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.04 %
% of genes near scaffold ends (potentially truncated)	60.58 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.731 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.385 % of family members)
Environment Ontology (ENVO)	Unclassified (60.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.67% β-sheet: 0.00% Coil/Unstructured: 21.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01527	HTH_Tnp_1	15.38
PF13384	HTH_23	13.46
PF13531	SBP_bac_11	3.85
PF01068	DNA_ligase_A_M	3.85
PF12850	Metallophos_2	0.96
PF00535	Glycos_transf_2	0.96
PF13340	DUF4096	0.96
PF14235	DUF4337	0.96
PF05717	TnpB_IS66	0.96
PF00589	Phage_integrase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	3.85
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.85
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
All Organisms	root	All Organisms	43.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
cellular organisms	root	All Organisms → cellular organisms	43.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22.12 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.62 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.85 %
Alsobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae	1.92 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.85 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	1.92 %
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.85 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	1.92 %
unclassified Roseobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.85 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	1.92 %
Roseobacter sp. H9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. H9	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0485838	Not Available	978	Open in IMG/M
3300000156\|NODE_c0563233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1331	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1026015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	921	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10049160	Not Available	1099	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10059817	All Organisms → cellular organisms → Bacteria → Proteobacteria	977	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10088475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	770	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10095116	Not Available	737	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10098831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	721	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1004244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2708	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1076550	Not Available	588	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1089926	Not Available	539	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10002824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3880	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10041521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1050	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1067145	Not Available	565	Open in IMG/M
3300004633\|Ga0066395_10114643	Not Available	1319	Open in IMG/M
3300005332\|Ga0066388_100985235	Not Available	1409	Open in IMG/M
3300005332\|Ga0066388_101658677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1129	Open in IMG/M
3300005363\|Ga0008090_10108456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300005363\|Ga0008090_10124650	Not Available	2019	Open in IMG/M
3300005363\|Ga0008090_15825303	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300005363\|Ga0008090_15883297	Not Available	935	Open in IMG/M
3300005713\|Ga0066905_100487715	Not Available	1022	Open in IMG/M
3300005764\|Ga0066903_100755355	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300005764\|Ga0066903_101715744	Not Available	1196	Open in IMG/M
3300005764\|Ga0066903_102335914	Not Available	1033	Open in IMG/M
3300005764\|Ga0066903_106945028	Not Available	587	Open in IMG/M
3300005764\|Ga0066903_107949368	Not Available	544	Open in IMG/M
3300005764\|Ga0066903_108773895	Not Available	513	Open in IMG/M
3300006871\|Ga0075434_102436799	Not Available	525	Open in IMG/M
3300006914\|Ga0075436_100036872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3375	Open in IMG/M
3300010046\|Ga0126384_10686682	Not Available	906	Open in IMG/M
3300010048\|Ga0126373_10095102	All Organisms → cellular organisms → Bacteria → Proteobacteria	2744	Open in IMG/M
3300010361\|Ga0126378_10117556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2656	Open in IMG/M
3300010366\|Ga0126379_10755234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1069	Open in IMG/M
3300010366\|Ga0126379_12141729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	661	Open in IMG/M
3300010376\|Ga0126381_101242219	Not Available	1077	Open in IMG/M
3300010398\|Ga0126383_11393593	Not Available	791	Open in IMG/M
3300010398\|Ga0126383_11608953	Not Available	739	Open in IMG/M
3300010398\|Ga0126383_12881078	Not Available	562	Open in IMG/M
3300012971\|Ga0126369_12397933	Not Available	614	Open in IMG/M
3300016270\|Ga0182036_10112626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1872	Open in IMG/M
3300016270\|Ga0182036_11472159	Not Available	571	Open in IMG/M
3300016341\|Ga0182035_10750560	Not Available	853	Open in IMG/M
3300016341\|Ga0182035_11573907	Not Available	592	Open in IMG/M
3300016341\|Ga0182035_11638537	Not Available	581	Open in IMG/M
3300016357\|Ga0182032_10324130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1224	Open in IMG/M
3300016371\|Ga0182034_11116342	Not Available	684	Open in IMG/M
3300016445\|Ga0182038_11614008	Not Available	583	Open in IMG/M
3300021560\|Ga0126371_10261909	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300031543\|Ga0318516_10013028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4076	Open in IMG/M
3300031543\|Ga0318516_10120135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1498	Open in IMG/M
3300031544\|Ga0318534_10027550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3076	Open in IMG/M
3300031545\|Ga0318541_10069556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1843	Open in IMG/M
3300031545\|Ga0318541_10114183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1461	Open in IMG/M
3300031546\|Ga0318538_10775073	Not Available	520	Open in IMG/M
3300031561\|Ga0318528_10038976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2367	Open in IMG/M
3300031573\|Ga0310915_10045043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	2826	Open in IMG/M
3300031681\|Ga0318572_10753400	Not Available	579	Open in IMG/M
3300031682\|Ga0318560_10188622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1099	Open in IMG/M
3300031719\|Ga0306917_10593458	Not Available	871	Open in IMG/M
3300031719\|Ga0306917_11598086	Not Available	500	Open in IMG/M
3300031724\|Ga0318500_10579790	Not Available	567	Open in IMG/M
3300031736\|Ga0318501_10738492	Not Available	543	Open in IMG/M
3300031763\|Ga0318537_10260129	Not Available	643	Open in IMG/M
3300031763\|Ga0318537_10294378	Not Available	601	Open in IMG/M
3300031768\|Ga0318509_10020758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3069	Open in IMG/M
3300031768\|Ga0318509_10377068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	793	Open in IMG/M
3300031769\|Ga0318526_10208190	Not Available	799	Open in IMG/M
3300031770\|Ga0318521_10468422	Not Available	755	Open in IMG/M
3300031780\|Ga0318508_1184597	Not Available	596	Open in IMG/M
3300031793\|Ga0318548_10657842	Not Available	508	Open in IMG/M
3300031795\|Ga0318557_10374763	Not Available	654	Open in IMG/M
3300031796\|Ga0318576_10164132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1039	Open in IMG/M
3300031798\|Ga0318523_10009626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3878	Open in IMG/M
3300031805\|Ga0318497_10652073	Not Available	590	Open in IMG/M
3300031833\|Ga0310917_10195237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1352	Open in IMG/M
3300031845\|Ga0318511_10184702	Not Available	922	Open in IMG/M
3300031890\|Ga0306925_10326345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1649	Open in IMG/M
3300031890\|Ga0306925_10411115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1449	Open in IMG/M
3300031890\|Ga0306925_10893280	Not Available	914	Open in IMG/M
3300031896\|Ga0318551_10012679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3715	Open in IMG/M
3300031896\|Ga0318551_10398380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300031912\|Ga0306921_10395046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1614	Open in IMG/M
3300031912\|Ga0306921_11357713	Not Available	783	Open in IMG/M
3300031912\|Ga0306921_12204916	Not Available	580	Open in IMG/M
3300031942\|Ga0310916_10711699	Not Available	849	Open in IMG/M
3300031954\|Ga0306926_10569087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. H9	1386	Open in IMG/M
3300031959\|Ga0318530_10012892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2719	Open in IMG/M
3300031959\|Ga0318530_10507310	Not Available	501	Open in IMG/M
3300031981\|Ga0318531_10101682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1267	Open in IMG/M
3300032001\|Ga0306922_10698511	Not Available	1068	Open in IMG/M
3300032035\|Ga0310911_10285714	Not Available	948	Open in IMG/M
3300032041\|Ga0318549_10239700	Not Available	816	Open in IMG/M
3300032041\|Ga0318549_10520889	Not Available	534	Open in IMG/M
3300032043\|Ga0318556_10322480	Not Available	808	Open in IMG/M
3300032044\|Ga0318558_10074857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1546	Open in IMG/M
3300032063\|Ga0318504_10315033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	742	Open in IMG/M
3300032066\|Ga0318514_10447944	Not Available	686	Open in IMG/M
3300032066\|Ga0318514_10545552	Not Available	617	Open in IMG/M
3300032066\|Ga0318514_10653518	Not Available	559	Open in IMG/M
3300032076\|Ga0306924_10078484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3696	Open in IMG/M
3300032076\|Ga0306924_11218187	Not Available	813	Open in IMG/M
3300032261\|Ga0306920_100168534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3264	Open in IMG/M
3300033290\|Ga0318519_10234132	Not Available	1058	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	1.92%
Engineered	Engineered	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.15%
Plants	Host-Associated → Plants	1.92%
Solid Waste	Engineered → Solid Waste	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Grass	Engineered → Solid Waste → Grass	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.54%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Composting	Engineered → Solid Waste → Grass → Composting	1.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.62%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	11.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.62%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	3.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	1.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_04858382	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MSRSNRRQDVLSLQLAPERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDLFLQIQALRDGSTSRNRF*
NODE_05632334	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MNKISRSNRKESLLERAWQPRDGSNVTYLHTSGAAVQLNQRLLARLEAENAQLRGSVVDLFLQIQALRDGSTSRNRF*
AF_2010_repII_A01DRAFT_10260152	3300000580	Forest Soil	MNKISRSNRKEDVQSLPLALERTWQPRDGSNVTYLHTSGAVVDQNQNQRLLEQLEAENAQLRGSVVDLLLHIQALRDGSTSRNRF*
AF_2010_repII_A1DRAFT_100491602	3300000597	Forest Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVPLNQSLLARLEAENAQLRGSVVDLFLQIRASRWFD*
AF_2010_repII_A1DRAFT_100598171	3300000597	Forest Soil	DVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT*
AF_2010_repII_A1DRAFT_100884752	3300000597	Forest Soil	MSRSNRTDVLSLQLAPERAWQPRDGSNVTYLHTSGAAVHMNQRLLARLEAENAQLRGSVVDLVLQIRALRDGV*
AF_2010_repII_A1DRAFT_100951162	3300000597	Forest Soil	MISQSNRKEILQLALERAWQPRDGSNVTYLHTSGAVVHQNQRLLAQLEAENAQLRGSVVDLLLQIRALRDGV*
AF_2010_repII_A1DRAFT_100988311	3300000597	Forest Soil	MSRNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT*
AF_2010_repII_A100DRAFT_10042441	3300000655	Forest Soil	MNKKSRSNRKEDVQRLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENARLRGSVVDLFLQIRASRDGST
AF_2010_repII_A100DRAFT_10765502	3300000655	Forest Soil	MSRSNRRQDVLSLQLAPEPAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENARLR
AF_2010_repII_A100DRAFT_10899261	3300000655	Forest Soil	MNKMSRSNRRENVSERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDLFLQIQALRDGSTSRNRF
AF_2010_repII_A001DRAFT_100028243	3300000793	Forest Soil	MNKKSRSNRKEDVQXLQLALERPWQSRDGSNVTYLHTSGAVVPLNQSLLARLEAENAQLRGSVVDLFLQIRASRWFD*
AF_2010_repII_A001DRAFT_100415211	3300000793	Forest Soil	MSRSNRRQDVLSLQLAPEPAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENARLRGSVVDLFLQIQALRD
AP72_2010_repI_A001DRAFT_10671451	3300000893	Forest Soil	MNKMSRSNRRENVSERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDLFLQIQALRD
Ga0066395_101146431	3300004633	Tropical Forest Soil	VQRLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLAQLEAENARLRGSVVDLFLQIR
Ga0066388_1009852352	3300005332	Tropical Forest Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLRTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIQASHDCSTSRNRF*
Ga0066388_1016586772	3300005332	Tropical Forest Soil	MSRSNRREDVGSNVTYLHISRAAVNLDQRLLARLEAENAHLRGSAVELLLQIQALRDGAT
Ga0008090_101084561	3300005363	Tropical Rainforest Soil	KEDVQSLPLALERTWQPRDGSNVTYLHTSGAVVDQNQNQRLLEQLEAENAQLRGSVVDLLLHIQALRDGSTSRNRF*
Ga0008090_101246502	3300005363	Tropical Rainforest Soil	MNKKSRSNRKEDVRSQQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIQASRNGSTSRNRF*
Ga0008090_158253032	3300005363	Tropical Rainforest Soil	MSRSNRREDVLSLQLALERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT*
Ga0008090_158832971	3300005363	Tropical Rainforest Soil	MISQSNRKEILQLALERAWQPRDGSNVTYLHTSGAAVQLNQRLLARLEAENAQPRGSVVDLFLQIQALRDGSTSRNRF*
Ga0066905_1004877151	3300005713	Tropical Forest Soil	MSRSNRREDVLSLQLGLERAWQPKDGSNVTYLHTSRAVVNLNRRLLARLETENAQLRGSVVDLLLQIHALRDGAR*
Ga0066903_1007553555	3300005764	Tropical Forest Soil	LERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIKALRDGAT*
Ga0066903_1017157442	3300005764	Tropical Forest Soil	MNKRSRSNRKEDVQSLQLALEGARQPRDGSSVTYLHSSGAVVNLNQRLLARLEAENAQLRGRVAELRLEIQALRDALGHPQFETQPK*
Ga0066903_1023359142	3300005764	Tropical Forest Soil	MSRSNRREDVLGLQLGLERAWQPRDGSNVTYLHTSGAVVNLNQRLLARLETENAQLRGSVVDLLLQIQALRDGDAR*
Ga0066903_1069450282	3300005764	Tropical Forest Soil	MSRSNRRQDVLSLQLAPERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLR
Ga0066903_1079493682	3300005764	Tropical Forest Soil	MNKMSRSNRRENVSERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLR
Ga0066903_1087738953	3300005764	Tropical Forest Soil	QLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT*
Ga0075434_1024367991	3300006871	Populus Rhizosphere	MSRSDRREDVLSLQLGLGRAWQPKDGSNITYLHTSRAVVNLNRRLLARLETENAQLRGS
Ga0075436_1000368721	3300006914	Populus Rhizosphere	RSNRREDVLSLQLGLGRAWQPKDGSNITYLHTSRAVVNLNRRLLARLETENAQLRGSVVDLLLQIHALRDGAR*
Ga0126384_106866822	3300010046	Tropical Forest Soil	MSRSNRREDVLSLQLGLGRAWQPKDGSNITYLHTSRAVVNLNRRLLARLETENAQLRGSVVDLLLQIHALRDGAR*
Ga0126373_100951023	3300010048	Tropical Forest Soil	MNKKSRSNRKEDVQRLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRWFDKPQ*
Ga0126378_101175561	3300010361	Tropical Forest Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRWFDKPQ*
Ga0126379_107552342	3300010366	Tropical Forest Soil	MNKISRSNRKEDVQSLPLALERTWQPRDGSNVTYLHTSGAVVDQNQRLLEQLEAENAQLRGSVVDLLLHIQALRDGSTSRNRF*
Ga0126379_121417291	3300010366	Tropical Forest Soil	MGGDNRSTGERMSRNRREDVLSLQLGLERAWQPRDGLNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQI
Ga0126381_1012422192	3300010376	Tropical Forest Soil	MNKKSRSNRKQDVQSPQLALERPWQSRDSSNVTYLHTSGAVVHLDQSLLARLEAENAQLRGSVVDLFLQIRASRDGSTSRN
Ga0126383_113935931	3300010398	Tropical Forest Soil	MNKISRSNRKEDVQSLPLALERTWQPRDGSNVTYLHTSGAVVDQNQNQNQRLLEQLEAENAQLRGSVVDLLLHIQALRDGSTSRNRF*
Ga0126383_116089532	3300010398	Tropical Forest Soil	GIAQRVPSNRGLPMNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRWFDKPQ*
Ga0126383_128810781	3300010398	Tropical Forest Soil	MNKMSRSNRRENVSERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDL
Ga0126369_123979331	3300012971	Tropical Forest Soil	MNKKSRSNRKEDVQRLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENARLRGSVVDLFLQIRASRDG
Ga0182036_101126262	3300016270	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0182036_114721591	3300016270	Soil	VLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENTQLRGSVVDLFLQIQALRDGSTSRNRF
Ga0182035_107505601	3300016341	Soil	MSRSNRRQDVLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDLFLQIQA
Ga0182035_115739071	3300016341	Soil	QLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDG
Ga0182035_116385372	3300016341	Soil	MSRSNRREDVLSLQLALERAWQPRDGSNVTFLHTSRAAVNLNHRLLARLEAENAQLRG
Ga0182032_103241302	3300016357	Soil	VLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0182034_111163421	3300016371	Soil	MSRSNRRQDVLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGS
Ga0182038_116140081	3300016445	Soil	EDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0126371_102619093	3300021560	Tropical Forest Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIQASRDGSTTRNRF
Ga0318516_100130286	3300031543	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRDGSTSRNRF
Ga0318516_101201353	3300031543	Soil	MSRSNRRQDVLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDLFLQIQALRDGSTSRNRF
Ga0318534_100275502	3300031544	Soil	MNKKSRSNRKEDVQSLQLAHERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRDGSTSRNRF
Ga0318541_100695561	3300031545	Soil	MVGDNRSTGERMSRSNRREDVLSLQLGLERAWQPRDGSNVAYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0318541_101141832	3300031545	Soil	MKKIARSNRREDVLSLQLGLERAWQPRDGSNVTYVHTSRAAVNLNHILARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0318538_107750732	3300031546	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0318528_100389764	3300031561	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLR
Ga0310915_100450435	3300031573	Soil	MSRSNRREDVLSLQLALERAWQPRDGSNVTFLHTSRAAVNLNHRLLARLEAENAQLRGSCDGAT
Ga0318572_107534001	3300031681	Soil	MSRSNRREDVLSLQLALERAWQPRGGSSVHYLHNTSVNQRLLERLEGENAQLRDSVV
Ga0318560_101886221	3300031682	Soil	MNKKSRSNRKEDVQSLQLAHERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGS
Ga0306917_105934582	3300031719	Soil	MIPAYCTYRKEDVQSLQLALEGARQPRDGSSVTYLHASGAVVNLNQRLLARLEAENAQLRGRVAELRLEIQALRDALGHPQFETQPK
Ga0306917_115980861	3300031719	Soil	GLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0318500_105797902	3300031724	Soil	RMSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0318501_107384921	3300031736	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVAYLHTSRAAVNLNHRLLARLEAENAQLRDSAVALLLQIQ
Ga0318537_102601292	3300031763	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVD
Ga0318537_102943782	3300031763	Soil	MSRSNRRQDVLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDLFLQIQALRDGST
Ga0318509_100207581	3300031768	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIQASRDG
Ga0318509_103770682	3300031768	Soil	MSRSNRREDVLSLQLALERAWQPRDGSNVTFLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0318526_102081902	3300031769	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLLLQIQALRDGAR
Ga0318521_104684222	3300031770	Soil	VLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVD
Ga0318508_11845972	3300031780	Soil	MSRSNRRQDVLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLR
Ga0318548_106578421	3300031793	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRDG
Ga0318557_103747631	3300031795	Soil	LGCEMIPAYCTYRKEDVQSLQLALEGARQPRDGSSVTYLHASGAVVNLNQRLLARLEAENAQLRGRVAELRLEIQALRDALGHPQFETQPK
Ga0318576_101641322	3300031796	Soil	MKKIARSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0318523_100096263	3300031798	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYHHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRDGSTSRNRF
Ga0318497_106520731	3300031805	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVV
Ga0310917_101952373	3300031833	Soil	MSRSNRRQDVLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDR
Ga0318511_101847022	3300031845	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLL
Ga0306925_103263451	3300031890	Soil	DVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0306925_104111153	3300031890	Soil	MSRSNWREDVLSLQLALERAWQPRGGSNVHTFIPTGLSVNQRPLERLEAENAQLRDC
Ga0306925_108932803	3300031890	Soil	DVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0318551_100126796	3300031896	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAIARVG
Ga0318551_103983802	3300031896	Soil	VLSLQLGLERAWQPRDGSNVTYVHTSRAAVNLNHILARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0306921_103950461	3300031912	Soil	LQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0306921_113577133	3300031912	Soil	DVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIQASRDGSTSRNRF
Ga0306921_122049162	3300031912	Soil	MSRSNRREDMLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0310916_107116991	3300031942	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0306926_105690874	3300031954	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVAYLHTSRAAVNLNHRLLARLEAENAQLRGSAVALLLQIQALRDGAR
Ga0318530_100128924	3300031959	Soil	MNKKSRSNRKEDVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRA
Ga0318530_105073101	3300031959	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQI
Ga0318531_101016822	3300031981	Soil	VLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0306922_106985112	3300032001	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVAYLHTSRAAVNLNHRLLARLEAENAQLRDSAVALLLQIQALRDGAR
Ga0310911_102857143	3300032035	Soil	SNRREDMLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0318549_102397001	3300032041	Soil	VRMSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0318549_105208891	3300032041	Soil	DVQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRDGSTSRNRF
Ga0318556_103224802	3300032043	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSA
Ga0318558_100748571	3300032044	Soil	VQSLQLALERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRDGSTSRNRF
Ga0318504_103150332	3300032063	Soil	MSRSNRREDVLSLQLALEHAWQPRDGSNVTFLHTSRAAVNLNHRLLARLEAENAQLRGSCDGAT
Ga0318514_104479442	3300032066	Soil	MNKKSRSNRKEDVQSLQLAHERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAGSTS
Ga0318514_105455522	3300032066	Soil	QSLQLAHERPWQSRDGSNVTYLHTSGAVVHLNQSLLARLEAENAQLRGSVVDLFLQIRASRDGSTSRNRF
Ga0318514_106535181	3300032066	Soil	MSRSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQL
Ga0306924_100784841	3300032076	Soil	QLGLERAWQPRDGSNVTYLHTSRAAVNLNHRLLARLEAENAQLRGSAVELLLQIQALRDGAT
Ga0306924_112181871	3300032076	Soil	RSNRREDVLSLQLGLERAWQPRDGSNVTYLHTSRAAVNRNHRLLARLEAENAQLRGRVVDLALQIQALRDGV
Ga0306920_1001685345	3300032261	Soil	MKKIARSNRREDVLSLQLGLERAWQPRDGSNVTYVHTSRAAVNLNHILARLEAENAQLRGSAVELLLQIQALRDG
Ga0318519_102341321	3300033290	Soil	MSRSNRRQDVLSLQLAAERAWQPRDGSNVTYLHTSGAVVGLNQGLLARLEAENAQLRGSVVDLFLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096771

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences