Metagenome / Metatranscriptome Family F096718

Overview

Basic Information

• Family ID: F096718
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 104
• Average Sequence Length: 44 residues
• Representative Sequence: AFSAVFSAKSMKEGTVMPRIIGRNLLLDAPSAKVDTGFA
• Number of Associated Samples: 99
• Number of Associated Scaffolds: 104

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 98
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (10.577 % of family members)
• Environment Ontology (ENVO): Unclassified (29.808 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (43.269 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 25.37%
  β-sheet: 0.00%
  Coil/Unstructured: 74.63%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01479	S4	10.58
PF00472	RF-1	0.96
PF14437	MafB19-deam	0.96
PF12705	PDDEXK_1	0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.96
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.96

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.12%
Host-Associated	Host-Associated	26.92%
Engineered	Engineered	0.96%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.35%
Plants	Host-Associated → Plants	26.92%
Aquatic	Environmental → Aquatic	5.77%
Solid Waste	Engineered → Solid Waste	0.96%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.54%
Peat	Environmental → Terrestrial → Peat	10.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.58%
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Roots	Host-Associated → Plants → Roots	3.85%
Sediment	Environmental → Aquatic → Sediment	1.92%
Peat Moss	Host-Associated → Plants → Peat Moss	0.96%
Grass	Engineered → Solid Waste → Grass	0.96%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.42%
Loam	Environmental → Terrestrial → Soil → Loam	13.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.92%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.92%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.96%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.96%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.96%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental
2170459015	Litter degradation PV4	Engineered
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005511	Combined assembly of arab plate scrape MF_Col (Combined Assembly)	Host-Associated
3300005513	Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)	Host-Associated
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental
3300029999	I_Palsa_E3 coassembly	Environmental
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental
3300030019	II_Fen_E2 coassembly	Environmental
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental
3300030503	III_Palsa_E3 coassembly	Environmental
3300030580	II_Palsa_N1 coassembly	Environmental
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental
3300034196	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_18	Environmental
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_09409320	2170459003	Grass Soil	PAFLAVFSAKSMKEGTVMPRIIRRNLLLDAPSAKVDADFA
4PV_00798420	2170459015	Switchgrass, Maize And Mischanthus Litter	VFSAKSMKEGAVIPRIIGRNLLLEAPSANVDTGFA
JGI25616J43925_104007072	3300002917	Grasslands Soil	SPLSTITHPIGTSPAFPAFWAAFSAKSMKDGALMSRLFVKSLLLEEHSAKVDTGFA*
JGI24140J50213_102006672	3300003369	Arctic Peat Soil	THPIGTSPDFPAFFAVFSAKSMKEGAVMPRIIGRNLLLGTHSAKVDTGFA*
JGI25404J52841_100063501	3300003659	Tabebuia Heterophylla Rhizosphere	ISAWAVGSRSVRVRLPALATTSLPRTITHPIGTSPDFSAISADFSAKSMKEGAFMPRIARGNLLLDGPSAKVDSGFA*
Ga0031654_101314391	3300003861	Freshwater Lake Sediment	MTSLLSTITHPIGTSPDFPALSAAFSAKSMKDGAVMPRIISKSLVVEAHSAKVESGFA*
Ga0062595_1010464182	3300004479	Soil	ITHPIGTSPDFPAFSAAFSAKSMKDGAVMSRIIGKSLVLEAHSAKVDTGFA*
Ga0070673_1021459722	3300005364	Switchgrass Rhizosphere	FPAFSAVLSAKSMKEGAFMPRIIGRNLLLAAPSANVDAGFA*
Ga0070659_1015830121	3300005366	Corn Rhizosphere	AFPAFSAVFSAKSMKEGAFMPRILGKNLLVGTPFSKSGFGFA*
Ga0070678_1019045732	3300005456	Miscanthus Rhizosphere	LAAFLAVFSAKSMKEGAVIPRIIGRNLLLEAPSANVDTGFA*
Ga0070706_1012862301	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	DFRAVSAAFSAKSMKDGAVMARIQAKCLLIKLHSAKVDTGFA*
Ga0077121_108240902	3300005511	Arabidopsis Rhizosphere	AFPAFSAVLSAKSMKEGAFKPRIIARNLLVAPPSARVNTGFA*
Ga0077120_12462021	3300005513	Arabidopsis Rhizosphere	SPAFPALSAAFSAKSMKEGAVNGSFPAQNSATELHSAKVDTGFA*
Ga0070684_1000088628	3300005535	Corn Rhizosphere	SRTITHPIGTSPDFPAFSAAFSAKSMKDGAVMSRIIGKSLVLEAHSAKVDTGFA*
Ga0070686_1001780752	3300005544	Switchgrass Rhizosphere	FPAFSAVLSAKSMKEGAVMPRIIERNLLLAAPSAKVDAGFA*
Ga0070665_1011195912	3300005548	Switchgrass Rhizosphere	FSAKSMKEGAFMPRIASGNLLLDGPSAKVDSRFA*
Ga0070665_1023035522	3300005548	Switchgrass Rhizosphere	PALSAVLSAKSMKEGAFKPRIIRRNLLVAAPSAEVLTEFA*
Ga0070665_1023983521	3300005548	Switchgrass Rhizosphere	TITHPIGTSPAFRAVSAAFSAKSMKDGAVMSRNARKSLVGNGHSAKVDTGFA*
Ga0068857_1017176912	3300005577	Corn Rhizosphere	AVFSAKSMKEGAFMPRIIGKNLLVHGPSAKVDSGFA*
Ga0068852_1025275392	3300005616	Corn Rhizosphere	SAVLSAKSMKEGAFKPRIIRRNLLVAAPSAEVHTEFA*
Ga0070764_101025672	3300005712	Soil	FSAVFSAKSMKEGTLMPRIIGRNLLLTAPSAKVDTGFA*
Ga0068861_1026674951	3300005719	Switchgrass Rhizosphere	THPIGTSPDFPAISAAFSAKSIKEGAFMPRIAGGNLLVDGPSAKVDSGFA*
Ga0070717_120378072	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DLPAFFAVFSAKSMKDGTVMPRIIGKNLLLDAPSAKVDADFA*
Ga0066696_110791772	3300006032	Soil	AVFSAKSMKEGAVMPRIIARNLLLDAPSAKVDTGFA*
Ga0075365_109679182	3300006038	Populus Endosphere	VLSAKSMKEGAVIPRIIGRNLLLEAPSANVDAGFA*
Ga0075028_1000562281	3300006050	Watersheds	AVSAAFSAKSMKDGADMSRIARRTLLLQTPSAKVDTGFA*
Ga0075364_106586462	3300006051	Populus Endosphere	PALAAFLAVLSAKSMKEGVVIPRIIGRNLLLEAPSANVDAGFA*
Ga0075435_1019570222	3300007076	Populus Rhizosphere	AISADFSAKSMKEGAFMPRIASGNLLLDGPSAKVDSGFA*
Ga0111539_130490732	3300009094	Populus Rhizosphere	LAVFSAKSMKEGAFVPRIIGGNLLLTAPSAKVDARFA*
Ga0105859_11978391	3300009651	Permafrost Soil	KVRLPDVAITSLLSAITHPIGTSPDFRAVSAAFSAKSMKEEAVMARIQAKCLLIEVHSAKVDAGFA*
Ga0116226_120937942	3300009787	Host-Associated	HPIGTSPAFPAFSADFSAKSIKEGAVMPRIIGGNLLSGASAARVNDGFA*
Ga0126359_16234442	3300010869	Boreal Forest Soil	AFSAKSMKEGAVMARIQAKCLLIEVHSAKVDAGFA*
Ga0126350_103033951	3300010880	Boreal Forest Soil	THPIGTSPDFPAFSAVFSAKSIKDGAVMPRIIGKYLLLAAPSARVDTGFA*
Ga0105246_125033961	3300011119	Miscanthus Rhizosphere	IGTSPAFPAFFAVFSAKSMKEGGIMPRIIGQNLLLGRPSANVDTGFA*
Ga0137392_109219471	3300011269	Vadose Zone Soil	FPAFSAVFSAKSMKEGAVIPRIIGTNLLLDAPSAKVNPGFA*
Ga0137393_115280102	3300011271	Vadose Zone Soil	VSAAFSAKSMKEGVVMPRLCAKSLLLQAHSAKVEPGFA*
Ga0120148_10699761	3300011999	Permafrost	MTXXXXSRTITHPIGTSPDFPAFSAAFSAKSMKDGAVMSRITGKSLVLEAHSAKVDTGFA
Ga0137399_106652882	3300012203	Vadose Zone Soil	HPIGTSPDFPAFSAAFSAKSMKDGAVMPRNIGETLLLNVPSAKVDTGFA*
Ga0137362_116301542	3300012205	Vadose Zone Soil	LPAFFAVFSAKSMKEGTVMPRIIGRNLLLDAPSAKVDADFA*
Ga0137372_109265422	3300012350	Vadose Zone Soil	VKVRFPADAMTSPLSTITHPTGTSPAFPAFWAAFSAKSMKDGALMPRLFVKSLLLEGHSAKVDTGFA*
Ga0157310_102522282	3300012916	Soil	AFPAFSAVFSAKSMKEGAVMPRIIERNLLLTAPSANVDAGFA*
Ga0137394_106843801	3300012922	Vadose Zone Soil	THPIGTSPDFPVFSAFFSAKSMKEGAVMPRIIGRNLLLDAPSAKVEPDFA*
Ga0137359_114562622	3300012923	Vadose Zone Soil	TITHPIGTSPDFPAFSAAFSAKSMKDGAVMSRIIGKSLVLGAHSAKVDTGFA*
Ga0137413_117572541	3300012924	Vadose Zone Soil	AFPAFSAVFSAKSMKEGVVMPRIIGRNLLLAAPSAKVDTGFA*
Ga0137413_118378851	3300012924	Vadose Zone Soil	TITHPIGTSPDFPAFSAAFSAKSMKDGAVMPRLAGKTLLGKAHSAKVDAGFA*
Ga0137419_104941981	3300012925	Vadose Zone Soil	AFSAKSMKEGAVMARIQAKCLLIKVHSAKVDTGFA*
Ga0137407_114561702	3300012930	Vadose Zone Soil	RFPAEAMTSPARTITHPIGTSPDFPAFLAAFSAKSMKDGAVMPRIARKSLVLNVNSAKVDAGFA*
Ga0164308_103385412	3300012985	Soil	FSAFFSAKSMKEGAVMPRIIARNLLLDAPSAKVDPDFA*
Ga0164308_104239841	3300012985	Soil	AAFLAVFSAKSMKEGAVIPRIIGRNLLLEAPSANVDTGFA*
Ga0157374_123538531	3300013296	Miscanthus Rhizosphere	ITHPIGTSPDFPAFLAVFSAKSMKEGTVMPRIIGRNLLLDAYSAKVDAGFA*
Ga0163162_121584952	3300013306	Switchgrass Rhizosphere	PAFSAVFSAKSMKEGAVMPRIIERNLLLTAPSANVDAGFA*
Ga0163163_120965792	3300014325	Switchgrass Rhizosphere	FPAFSAVFSAKSMKEGGVMPRIIERNLLVAAPSANVDAGFA*
Ga0182024_125711301	3300014501	Permafrost	AFSAKSMKVGSVMPRIARITLLVDAASAKVDTGFA*
Ga0132257_1013625252	3300015373	Arabidopsis Rhizosphere	FSAFFSAKSMKEGAVMPRIIARNLLVDAPSAKVDPDFA*
Ga0163161_111177631	3300017792	Switchgrass Rhizosphere	IGTSPDFAAISADFSAKSMKEGAFMPRIASGNLLLDGPSAKVDSRFA
Ga0187847_100541711	3300017948	Peatland	IGTSPDFPAFLAVLSAKSMKDGAVMPRIIRKYLLLDAASAKVDAGFA
Ga0184605_103942712	3300018027	Groundwater Sediment	HPIGTSPDFPAFLAAFSAKSMKDGAVMPRIHAKSLLLGAHPAKVEPGFA
Ga0193713_10300612	3300019882	Soil	FSAVFSAKSMKEGAVMPRIIRRNLLLETHSAKVDTGFA
Ga0193729_10601362	3300019887	Soil	SPDFRAVSAAFSAKSMKEGAVMARIQAKCLLIELHSAKVDTGFA
Ga0210385_107612292	3300021402	Soil	AVFSAKSMKEGTVMPRIIGINLLREAPSAKVDTGFA
Ga0210410_107881112	3300021479	Soil	TITHPIGTSPAFPAFSAVFSAKSMKDGAVMPRIIGKYLLLAAASAKVDTDFA
Ga0210409_116177672	3300021559	Soil	PAFPAFFAVFSAKSMKEGAVIPRIIGRNLLLEGHSAKVDTDFA
Ga0213853_109234411	3300021861	Watersheds	DFSAVSAAFSAKSMKEGAVMARIKAKCLLIELHSAKVDTGFA
Ga0213853_111989072	3300021861	Watersheds	AVLSAKSMKEGGIMPRIIGQNLLLHRPSANVDTGFA
Ga0208850_10506061	3300025457	Arctic Peat Soil	FSAAFSAKSMKDGAVMSRLYAKSLLLEAHSAKVDTGFA
Ga0207685_102846891	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VFSAFFSAKSMKEGAVMPRIIARNLLLDAPSAKVDPDFA
Ga0207663_113457791	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FRAFSAAFSAKSMKDDAVMPRIARRNLLLDTPSAKVDAGFA
Ga0207660_100582593	3300025917	Corn Rhizosphere	TSPAFPAFAAVFSAKSMKEGAFMPRIIGKNLLLDAPSAKVDSGFA
Ga0207646_104067192	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTHPIGTSPDFPVFSAFFSAKSMKEGAVMPRIIARNLLLDAPSAKVDPDFA
Ga0207664_103557362	3300025929	Agricultural Soil	IGTSPAFPALSAAFSAKSMKEGAVNGSFPAQNSATELHSAKVDTGFA
Ga0207640_108883672	3300025981	Corn Rhizosphere	AFPAFSAVFSAKSMKEGGVMPRIIERNLLVAAPSANVDAGFA
Ga0257180_10413321	3300026354	Soil	DFPVFSAFFSAKSMKEGAVMPRIIGRNLLLDAPSAKVDPDFA
Ga0257177_10804002	3300026480	Soil	PAFWAAFSAKSMKDGALMSRLFVKSLLLEEHSAKVDTGFA
Ga0257164_10382711	3300026497	Soil	FPVFSAFFSAKSMKEGAVMPRIIGRNLLLDAPSAKVEPDFA
Ga0209690_11772521	3300026524	Soil	AFSAVFSAKSMKEGTVMPRIIGRNLLLAAPSANVDAGFA
Ga0209056_103274691	3300026538	Soil	FPAVSAAFSAKSMKEGAVMPRLCPKSLLLQSHSAKVEPGFA
Ga0207983_10492052	3300027310	Soil	PAFLAVFSAKSMKEGAVMPRIIGRNLLVEAPSAKVDTGFA
Ga0209527_10632722	3300027583	Forest Soil	PAFPAFSAVLSAKSMKEGTVMPRIIGKNLLLDATSAKVDTDFA
Ga0209329_10679392	3300027605	Forest Soil	VFSAKSMKEGAVIPRIIGRNLLLDGHSAKVDTGFA
Ga0209422_11551652	3300027629	Forest Soil	AFAAFFAVFSAKSMKEGAVIPRIIGRNLLLGGHSAKVDTGFA
Ga0208989_101376811	3300027738	Forest Soil	VFSAKSMKEGAVMPRIIGTNLLLDAASAKVDIGFA
Ga0268266_118887361	3300028379	Switchgrass Rhizosphere	TITHPIGTSPAFRAVSAAFSAKSMKDGAVMSRNARKSLVGNGHSAKVDTGFA
Ga0268265_104964051	3300028380	Switchgrass Rhizosphere	AFPAFSAVLSAKSMKEGAFKPRIIARNLLVAAPSAEVLTDIA
Ga0302226_104491231	3300028801	Palsa	FSAAFNAKSMKVGAVMSRIAGKSLILESHSAKVDTGFA
Ga0302278_104566471	3300028866	Bog	LPAFLAVFSAKSMKEGTVMPRIIGKNLLLGAHSAKVDTGFA
Ga0302276_100168305	3300029992	Bog	FLAVFSAKSMKEGTVMPRIIGKNLLLGAHSAKVDTGFA
Ga0311339_106230412	3300029999	Palsa	ITHPIGTSPAFPAFSADFRAKSIKEGAAMPRIIERNLLLAAASANVDTGFA
Ga0302172_102337772	3300030003	Fen	AVFSAKSMKEGGIMPRIIGQNLLLHLPSANVDTGFA
Ga0311348_108422891	3300030019	Fen	AVFSAKSMKEGGIMPRIIGQNLLLHRPSANVDTGFA
Ga0302282_11801181	3300030045	Fen	PAFSAAFSAKSMKDGAVMPRIIRKTLLGNGASAKVDTGFA
Ga0311370_119646521	3300030503	Palsa	AFSAAFSAKSMKDGAVMPRIAGRTLLWDGPSAKVDTDFA
Ga0311355_118898132	3300030580	Palsa	AFSAVFSAKSMKEGTVMPRIIGRNLLLDAPSAKVDTGFA
Ga0265316_107021302	3300031344	Rhizosphere	AVFSAKSMKEGAVIPRIIGRNLLLDSHSAKVDTGFA
Ga0310686_1134389082	3300031708	Soil	SAAFSAKSMKDGAVMPRIARRTLLWEVPSAKVDAGFA
Ga0307476_107743661	3300031715	Hardwood Forest Soil	PDFPAFSAVFSAKSMKDGAVMPRIIGKYLLLATPSAKVDAGFA
Ga0307516_107805432	3300031730	Ectomycorrhiza	FAAFLAVFSAKSLKEGAVIPRIIGRNLLVEAPSANVDTGFA
Ga0307477_105718411	3300031753	Hardwood Forest Soil	PDFPAFSAVFSAKSMKEGAVMPRIIGRNLLVDAPSAKVDLGPYVR
Ga0302315_104754702	3300031837	Palsa	IGTSPAFPAFLAVLSAKSMKDGAVMPRIIGKYLLLDAPSAKVDAGFA
Ga0308173_108357531	3300032074	Soil	AVLSAKSMKEGAFKPRIIPRNLLVAAPSAEVLTDFA
Ga0307472_1004634561	3300032205	Hardwood Forest Soil	SAVFSAKSMKEGAVMPRIIGRNLLVKQPSAKVDTGFA
Ga0334847_000276_3269_3394	3300033826	Soil	LPAFFAVFSAKSMKEGTVMPRIIGKNLLVDAPSAKVDADFA
Ga0370503_0102857_807_962	3300034196	Untreated Peat Soil	MTQPIGTSPSFSARSAAASAKSMKDGADMPRLDRKTLLEERASAKVDAGFA
Ga0372943_0163831_32_223	3300034268	Soil	LPAVAMTSKSLTITHPIGTSPDFPAFSAVFSAKSMKEGAVMPRIIRRNLLMLAASAKVDTGFA
Ga0372946_0069964_1463_1612	3300034384	Soil	HPIGTSPAFAAFSAVFSAKSMKEGAVMPRIIGTNLLLDAASAKVDIGFA