NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096717

Metagenome Family F096717

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096717
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 62 residues
Representative Sequence MYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSSFTSIECVKKGN
Number of Associated Samples 70
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 63.46 %
% of genes near scaffold ends (potentially truncated) 30.77 %
% of genes from short scaffolds (< 2000 bps) 65.38 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (46.154 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(53.846 % of family members)
Environment Ontology (ENVO) Unclassified
(77.885 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.154 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 0.00%    β-sheet: 39.06%    Coil/Unstructured: 60.94%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF14743DNA_ligase_OB_2 33.65
PF01242PTPS 7.69
PF03851UvdE 2.88
PF00152tRNA-synt_2 1.92
PF01266DAO 0.96
PF13394Fer4_14 0.96
PF05488PAAR_motif 0.96
PF10276zf-CHCC 0.96
PF01208URO-D 0.96
PF01471PG_binding_1 0.96
PF00565SNase 0.96
PF03332PMM 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG07206-pyruvoyl-tetrahydropterin synthaseCoenzyme transport and metabolism [H] 7.69
COG4294UV DNA damage repair endonucleaseReplication, recombination and repair [L] 2.88
COG0017Aspartyl/asparaginyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.92
COG0173Aspartyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.92
COG1190Lysyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 1.92
COG2269Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)Translation, ribosomal structure and biogenesis [J] 1.92
COG0407Uroporphyrinogen-III decarboxylase HemECoenzyme transport and metabolism [H] 0.96
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 0.96
COG4104Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretionIntracellular trafficking, secretion, and vesicular transport [U] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.62 %
UnclassifiedrootN/A40.38 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001589|JGI24005J15628_10060968All Organisms → Viruses → Predicted Viral1407Open in IMG/M
3300001942|GOS2262_1011932All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1706Open in IMG/M
3300004941|Ga0068514_1000241Not Available7178Open in IMG/M
3300005432|Ga0066845_10276479Not Available649Open in IMG/M
3300005432|Ga0066845_10390114Not Available539Open in IMG/M
3300005606|Ga0066835_10306371All Organisms → cellular organisms → Bacteria → Proteobacteria550Open in IMG/M
3300005837|Ga0078893_10235976Not Available6598Open in IMG/M
3300005960|Ga0066364_10008195All Organisms → cellular organisms → Bacteria3047Open in IMG/M
3300005971|Ga0066370_10077129Not Available1082Open in IMG/M
3300007113|Ga0101666_1007769Not Available1704Open in IMG/M
3300007144|Ga0101670_1012716All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300007152|Ga0101672_1030941Not Available891Open in IMG/M
3300012920|Ga0160423_10080634All Organisms → Viruses → Predicted Viral2316Open in IMG/M
3300012928|Ga0163110_10003792Not Available7952Open in IMG/M
3300012928|Ga0163110_10004044All Organisms → cellular organisms → Bacteria7760Open in IMG/M
3300012928|Ga0163110_10175886All Organisms → cellular organisms → Bacteria → Proteobacteria1501Open in IMG/M
3300012928|Ga0163110_10252841All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300012928|Ga0163110_10927403All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300012928|Ga0163110_11185271All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300012936|Ga0163109_10001612Not Available17810Open in IMG/M
3300012952|Ga0163180_10002756Not Available9746Open in IMG/M
3300012952|Ga0163180_10006020All Organisms → cellular organisms → Bacteria6706Open in IMG/M
3300012952|Ga0163180_10163084All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300012954|Ga0163111_10041402All Organisms → cellular organisms → Bacteria3538Open in IMG/M
3300012954|Ga0163111_11084721Not Available777Open in IMG/M
3300012954|Ga0163111_11624902All Organisms → cellular organisms → Bacteria → Proteobacteria643Open in IMG/M
3300013181|Ga0116836_1046453All Organisms → cellular organisms → Bacteria → Proteobacteria503Open in IMG/M
3300013188|Ga0116834_1001263Not Available3717Open in IMG/M
3300013188|Ga0116834_1005122Not Available2020Open in IMG/M
3300013195|Ga0116815_1042745All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300013231|Ga0116832_1003933All Organisms → Viruses → Predicted Viral1824Open in IMG/M
3300013253|Ga0116813_1012793All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1318Open in IMG/M
3300013253|Ga0116813_1013469All Organisms → Viruses → Predicted Viral1287Open in IMG/M
3300017818|Ga0181565_10218813All Organisms → cellular organisms → Bacteria → Proteobacteria1303Open in IMG/M
3300017818|Ga0181565_10355988All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon973Open in IMG/M
3300018416|Ga0181553_10467373Not Available677Open in IMG/M
3300018420|Ga0181563_10580451Not Available624Open in IMG/M
3300018426|Ga0181566_10968051Not Available574Open in IMG/M
3300020239|Ga0211501_1048096All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300020248|Ga0211584_1059658Not Available594Open in IMG/M
3300020264|Ga0211526_1053022Not Available685Open in IMG/M
3300020269|Ga0211484_1006421All Organisms → cellular organisms → Bacteria2717Open in IMG/M
3300020269|Ga0211484_1100973All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300020281|Ga0211483_10033644All Organisms → cellular organisms → Bacteria → Proteobacteria1690Open in IMG/M
3300020281|Ga0211483_10093696All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon989Open in IMG/M
3300020282|Ga0211667_1122232All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium628Open in IMG/M
3300020296|Ga0211474_1031077Not Available873Open in IMG/M
3300020339|Ga0211605_1034616All Organisms → Viruses → Predicted Viral1061Open in IMG/M
3300020341|Ga0211592_1033623Not Available1092Open in IMG/M
3300020362|Ga0211488_10026025All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2088Open in IMG/M
3300020365|Ga0211506_1240110All Organisms → cellular organisms → Bacteria → Proteobacteria500Open in IMG/M
3300020377|Ga0211647_10253506Not Available559Open in IMG/M
3300020380|Ga0211498_10040363Not Available1734Open in IMG/M
3300020386|Ga0211582_10058171All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1405Open in IMG/M
3300020394|Ga0211497_10006174Not Available7296Open in IMG/M
3300020394|Ga0211497_10281210All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300020397|Ga0211583_10005142Not Available6512Open in IMG/M
3300020400|Ga0211636_10086872Not Available1278Open in IMG/M
3300020401|Ga0211617_10004786All Organisms → cellular organisms → Bacteria6300Open in IMG/M
3300020401|Ga0211617_10465015All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300020403|Ga0211532_10007420Not Available7246Open in IMG/M
3300020403|Ga0211532_10012961All Organisms → cellular organisms → Bacteria5019Open in IMG/M
3300020403|Ga0211532_10070501Not Available1570Open in IMG/M
3300020405|Ga0211496_10221214All Organisms → cellular organisms → Bacteria → Proteobacteria703Open in IMG/M
3300020408|Ga0211651_10009796All Organisms → cellular organisms → Bacteria5072Open in IMG/M
3300020408|Ga0211651_10011005All Organisms → cellular organisms → Bacteria4716Open in IMG/M
3300020409|Ga0211472_10205765All Organisms → cellular organisms → Bacteria → Proteobacteria790Open in IMG/M
3300020416|Ga0211644_10013873All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium3332Open in IMG/M
3300020416|Ga0211644_10365088All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300020417|Ga0211528_10024435All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium2945Open in IMG/M
3300020419|Ga0211512_10151564All Organisms → Viruses → Predicted Viral1073Open in IMG/M
3300020421|Ga0211653_10021493All Organisms → cellular organisms → Bacteria → Proteobacteria3048Open in IMG/M
3300020422|Ga0211702_10199612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria605Open in IMG/M
3300020433|Ga0211565_10009637Not Available4112Open in IMG/M
3300020436|Ga0211708_10431675All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300020439|Ga0211558_10277919All Organisms → cellular organisms → Bacteria → Proteobacteria787Open in IMG/M
3300020442|Ga0211559_10006848All Organisms → cellular organisms → Bacteria6071Open in IMG/M
3300020442|Ga0211559_10359052All Organisms → cellular organisms → Bacteria → Proteobacteria675Open in IMG/M
3300020446|Ga0211574_10000704Not Available18239Open in IMG/M
3300020446|Ga0211574_10006842All Organisms → cellular organisms → Bacteria → Proteobacteria5677Open in IMG/M
3300020446|Ga0211574_10008026All Organisms → cellular organisms → Bacteria5196Open in IMG/M
3300020446|Ga0211574_10015451All Organisms → cellular organisms → Bacteria3635Open in IMG/M
3300020446|Ga0211574_10268091All Organisms → cellular organisms → Bacteria → Proteobacteria739Open in IMG/M
3300020446|Ga0211574_10376686Not Available613Open in IMG/M
3300020446|Ga0211574_10399498All Organisms → cellular organisms → Bacteria → Proteobacteria593Open in IMG/M
3300020448|Ga0211638_10043993All Organisms → cellular organisms → Bacteria1940Open in IMG/M
3300020455|Ga0211664_10581576Not Available507Open in IMG/M
3300020463|Ga0211676_10007481Not Available9798Open in IMG/M
3300020463|Ga0211676_10014075Not Available6659Open in IMG/M
3300020463|Ga0211676_10045503All Organisms → Viruses → Predicted Viral3157Open in IMG/M
3300020469|Ga0211577_10457696Not Available779Open in IMG/M
3300020471|Ga0211614_10159369Not Available971Open in IMG/M
3300020471|Ga0211614_10421511Not Available590Open in IMG/M
3300021356|Ga0213858_10108172Not Available1358Open in IMG/M
3300021364|Ga0213859_10078562All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300022074|Ga0224906_1227332Not Available502Open in IMG/M
3300023110|Ga0255743_10132444Not Available1442Open in IMG/M
3300025138|Ga0209634_1007150Not Available7024Open in IMG/M
3300025151|Ga0209645_1225402All Organisms → cellular organisms → Bacteria → Proteobacteria538Open in IMG/M
3300027774|Ga0209433_10122935All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon967Open in IMG/M
3300031785|Ga0310343_10000068Not Available40769Open in IMG/M
3300031785|Ga0310343_10076556Not Available2095Open in IMG/M
3300031785|Ga0310343_10253652All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300031785|Ga0310343_10727357All Organisms → cellular organisms → Bacteria → Proteobacteria743Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine53.85%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine15.38%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater10.58%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.77%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater3.85%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.88%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.92%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.96%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water0.96%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.96%
Volcanic Co2 SeepsEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seeps0.96%
Volcanic Co2 Seep SeawaterEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater0.96%
Volcanic Co2 SeepEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001942Marine microbial communities from Polynesia - GS047EnvironmentalOpen in IMG/M
3300004941Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-0.2umEnvironmentalOpen in IMG/M
3300005432Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78EnvironmentalOpen in IMG/M
3300005606Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300005960Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_AEnvironmentalOpen in IMG/M
3300005971Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_AEnvironmentalOpen in IMG/M
3300007113Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, Water-isEnvironmentalOpen in IMG/M
3300007144Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'control', waterEBic1EnvironmentalOpen in IMG/M
3300007152Seawater microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', waterEBds3EnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300013181Marine hypoxic microbial communities from the Gulf of Mexico, USA - 9m_Station6_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300013188Marine hypoxic microbial communities from the Gulf of Mexico, USA - 6m_Station1_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300013195Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300013231Marine hypoxic microbial communities from the Gulf of Mexico, USA - 5m_Station5_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300013253Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station4_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020239Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555909-ERR598959)EnvironmentalOpen in IMG/M
3300020248Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556118-ERR599141)EnvironmentalOpen in IMG/M
3300020264Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158)EnvironmentalOpen in IMG/M
3300020269Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)EnvironmentalOpen in IMG/M
3300020281Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116)EnvironmentalOpen in IMG/M
3300020282Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX556074-ERR599169)EnvironmentalOpen in IMG/M
3300020296Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX556002-ERR599140)EnvironmentalOpen in IMG/M
3300020339Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX555929-ERR599080)EnvironmentalOpen in IMG/M
3300020341Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555908-ERR599066)EnvironmentalOpen in IMG/M
3300020362Marine microbial communities from Tara Oceans - TARA_A100001234 (ERX556035-ERR599049)EnvironmentalOpen in IMG/M
3300020365Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)EnvironmentalOpen in IMG/M
3300020377Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)EnvironmentalOpen in IMG/M
3300020380Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)EnvironmentalOpen in IMG/M
3300020386Marine microbial communities from Tara Oceans - TARA_B100000609 (ERX555990-ERR599038)EnvironmentalOpen in IMG/M
3300020394Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)EnvironmentalOpen in IMG/M
3300020397Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)EnvironmentalOpen in IMG/M
3300020400Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)EnvironmentalOpen in IMG/M
3300020401Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020405Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)EnvironmentalOpen in IMG/M
3300020408Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)EnvironmentalOpen in IMG/M
3300020409Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)EnvironmentalOpen in IMG/M
3300020416Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)EnvironmentalOpen in IMG/M
3300020417Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)EnvironmentalOpen in IMG/M
3300020419Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020422Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)EnvironmentalOpen in IMG/M
3300020433Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020446Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)EnvironmentalOpen in IMG/M
3300020448Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)EnvironmentalOpen in IMG/M
3300020455Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)EnvironmentalOpen in IMG/M
3300020463Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020471Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300023110Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaGEnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027774Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50m (SPAdes)EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24005J15628_1006096833300001589MarineMYWLVLILSVAGMPDMQMEMKMGNYWTCNIAKQKFEDANPPNVTIEGEQKKSSFDSINCVKKG*
GOS2262_101193223300001942MarineMYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTYIECEKKGNS*
Ga0068514_100024153300004941Marine WaterMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKQSSFTSIDCLKKG*
Ga0066845_1027647923300005432MarineMYWLVLVLSISGMPDMQMEMKMGSYFTCTIAKQKFEDANPPTVIINGKDKTSTFNNIECVKRTT*
Ga0066845_1039011423300005432MarineMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKKSSFTSIDCLKKG*
Ga0066835_1030637123300005606MarineMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSSFTSIECVKKGN*
Ga0078893_1023597613300005837Marine Surface WaterIYYQWNGWRFLMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFTSIECVKKGS*
Ga0066364_1000819523300005960MarineMYWLAVVVSIAGSPDIQMEMKMGSYFTCSLAKQKFEDSNPPTVFIEGKQKKSSFKDIKCVKKG*
Ga0066370_1007712913300005971MarineMYWLALVLSIAGSPDLQMEMKMGSYFTCSLAKQKFEDSNPPTVFIEGKQKKSSFKDIKCVKKG*
Ga0101666_100776933300007113Volcanic Co2 Seep SeawaterMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKQSSFTSIECVKKGK*
Ga0101670_101271623300007144Volcanic Co2 SeepMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFTSIECVKKGK*
Ga0101672_103094133300007152Volcanic Co2 SeepsMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFTSIECVKKGS*
Ga0160423_1008063443300012920Surface SeawaterMYWLVIVLSISGMPDINMEVKMGSYFTCSLAKQKFIDGNPPNIFIKGKPKKSNLHGIECVKKD*
Ga0163110_10003792143300012928Surface SeawaterMYWLVLVLSISGMPDITIKNQMGGYFTCQIAKQKFVDANPPTILIEGKEKKSSFTSIECVKKGN*
Ga0163110_10004044133300012928Surface SeawaterVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSSFTSIECVKKGN
Ga0163110_1017588633300012928Surface SeawaterMYWLVLVLSISGMPDITIENKMGSYITCSIAKQKFIDSNPPTIYVKGKNKKAEWDGIECIKK*
Ga0163110_1025284143300012928Surface SeawaterMEGGIMYWLVLVLSIAGMPDITIENKMGSYITCNLAQKKFIDSNPPTIFVKGKEKKSNWSDIKCIKKL*
Ga0163110_1092740313300012928Surface SeawaterKNQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTYIECEKKGNS*
Ga0163110_1118527123300012928Surface SeawaterMYWLVLVLSISGMPDITIENEMGGYFTCKIAQQKFEDANPPNIIIKGKEKKSSFTNIECIKK*
Ga0163109_1000161213300012936Surface SeawaterRKHIYYQWNGWRFLMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKKSSFTSIDCLKKG*
Ga0163180_1000275633300012952SeawaterLYWLVLVLSVSGMPDMQMEMKMGSYFTCSIAKQKFEDANPPNVIIKGKQKKSNFNSIECIKRDT*
Ga0163180_1000602043300012952SeawaterMYWLVLVLSISGMPDITIENKMGSYITCSIAKQKFIDGNPPTITVKGKKKQAEFNGIECIKK*
Ga0163180_1016308443300012952SeawaterMYWLVLVLSIAGMPDITIENKMGSYITCSIAKQKFIDGNPPTIFVKGKEKKSHWSDIKCIKKQ*
Ga0163111_1004140223300012954Surface SeawaterMYWLVLVLSISGMPDINMEVKMGSYFTCSLAKQKFIDGNPPNIFVKGKAKKSNLHSIECIKKD*
Ga0163111_1108472123300012954Surface SeawaterMPDMQMEMKMGNYFTCSIAKQKFEDANPPTVIIKGKNKKSAFNSIECVKRDT*
Ga0163111_1162490223300012954Surface SeawaterISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSSFTSIECVKKGN*
Ga0116836_104645323300013181MarineKIAKQKFVDANPPNIIIEGKEKKSSFTSIECIKKG*
Ga0116834_100126383300013188MarineMYWLVLVLSISGMPDITMENQMGGYFTCKIAKQKFVDANPPNIIIEGKEKKSSFTSIECIKKG*
Ga0116834_100512233300013188MarineMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIDGKEKRSNFTSIDCLKKG*
Ga0116815_104274523300013195MarineMYWLVLVLSISGMPDITMENQMGGFFTCQIAKQKFEDANPPNIIINGKEKQSSFTSIDCLKKG*
Ga0116832_100393323300013231MarineMPDITIKNQMGGYFTCQIAKQKFVDANPPTILIEGKEKKSSFTSIKCIKKG*
Ga0116813_101279313300013253MarineLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIDGKEKRSNFTSIDCLKKG*
Ga0116813_101346923300013253MarineMPDITMENQMGGYFTCKIAKQKFVDANPPNIIIEGKEKKSSFTSIECIKKG*
Ga0181565_1021881333300017818Salt MarshMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKQSSFTSIDCLKKG
Ga0181565_1035598813300017818Salt MarshNQMGGYFTCKIAKQKFVDANPPNIIIKGKEKKSSFTSIECIKKG
Ga0181553_1046737333300018416Salt MarshMPDITMENQMGGYFTWQIVKQKFVDANPPTILIEGKEKKSSFTSI
Ga0181563_1058045123300018420Salt MarshMPDITMENQMGGYFTCKIAKQKFVDANPPNIIIEGKEKKSSFTS
Ga0181566_1096805113300018426Salt MarshMYWLVLVLSISGMPDITMENQMGGYFTCKIAKQKFVDANPPNIIIEGKEKKSSF
Ga0211501_104809623300020239MarineMYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTHIDCEKKGV
Ga0211584_105965813300020248MarineMYWLALVLSIAGSPDLQMEMKMGSYFTCSLAKQKFEDSNPPTVFIEGKQKKSSFKDIKCVKKG
Ga0211526_105302223300020264MarineMYWLVLVLSISGMPDITIENKMGSYITCSIAKQKFIDSNPPTIYVKGKNKKAEWDGIECIKK
Ga0211484_100642133300020269MarineMYWLVLVLSIAGMPDITIENKMGSYITCNLAQKKFIDSNPPTIFVKGKEKKSNWSDIKCIKKL
Ga0211484_110097323300020269MarineMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEAANPPNIIIKGKEKKSNFSSIKCLKKGS
Ga0211483_1003364423300020281MarineMYWLVLVLSISGMPDMQMEMKMGSYFTCTIAKQKFEDANPPNVIINGKDKTSTFNNIECVKRTT
Ga0211483_1009369633300020281MarineMYWLVLVLSISGMPDITIKNQMGGYFTCQIAKQKFVDANPPTILIKGKEKKSSFTSIECVKKGN
Ga0211667_112223223300020282MarineSGEMYWLVLVLSISGMPDITIENKMGSYITCSIAKQKFIDGNPPTITVKGKKRLAEFEGIECIKK
Ga0211474_103107723300020296MarineLYWLVLVLSVSGMPDMQMEMKMGSYFTCSIAKQKFEDANPPNVIIKGKQKKSNFNSIECIKRDT
Ga0211605_103461623300020339MarineMYWLALVLTIAGSPDMHMEMKMGSYFTCSLAKQKFEDSNPPTVFIEGKQKKSSFKDIKCVKKG
Ga0211592_103362363300020341MarineINMYWLALVLTIAGSPDMHMEMKMGSYFTCSLAKQKFEDSNPPTVFIEGKQKKSSFKDIKCVKKG
Ga0211488_1002602513300020362MarineLMYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTHIDCEKKGV
Ga0211506_124011023300020365MarineMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFTSIECVKKGK
Ga0211647_1025350623300020377MarineMYWLVLVLSISGMPDITIENKMGSYITCSIAKQKFIDGNPPTITVKGKIKKAEFNGIECIKKXT
Ga0211498_1004036323300020380MarineMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFTSIECVKKGK
Ga0211582_1005817123300020386MarineMYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPNIIIKGKEKKSSFTNIECVKK
Ga0211497_1000617413300020394MarinePDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFTSIECVKKGK
Ga0211497_1028121013300020394MarinePDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKQSSFTSIDCLKKG
Ga0211583_1000514213300020397MarineCQIAKQKFVDANPPTIIIKGKEKKSSFTHIDCEKKGV
Ga0211636_1008687223300020400MarineMYWLVLVLSISGMPDITIENEMGGYFTCKIAQQKFEDANPPNIIIKGKEKKSSFTNIECIKK
Ga0211617_1000478643300020401MarineMYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTHIDCEKKGS
Ga0211617_1046501523300020401MarineNLYYQWNGWRFLMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSSFTNIECIKK
Ga0211532_10007420123300020403MarineKNFYYQWYGWRFLMYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTHIDCEKKGV
Ga0211532_1001296183300020403MarineKNFYYQWYGWRFLMYWLVLVLSISGMPDITIKNQMGGYFTCQIAKQKFVDANPPTILIEGKEKKSSFTSIECVKKGN
Ga0211532_1007050123300020403MarineMPDITMENQMGGYFTCKIAKQKFVDANPPNIIIEGKEKKSSFTSIECVKKG
Ga0211496_1022121413300020405MarineYFTCQIAKQKFEDANPPNIIIKGKEKKSNFTSIECVKKGK
Ga0211651_1000979683300020408MarineMYWLVLVLSISGMPDITIKNQMGGYFTCQIAKQKFVDANPPTILIEGKEKKSSFTSIECVKKGN
Ga0211651_1001100563300020408MarineMYWLVLVLSIAGMPDITIENKMGSYITCNLAQKKFIDSNPPTIIVKGKEKKSHWSDIKCIKKL
Ga0211472_1020576513300020409MarineWYGWRFLMYWLVLVLSISGMPDITIKNQMGGYFTCQIAKQKFVDANPPTILIEGKEKKSSFTSIECVKKGN
Ga0211644_1001387343300020416MarineMYWLVLVLSISGMPDITIENKMGSYITCSIAKQKFIDGNPPTITVKGKIKKAEFNGIECIKK
Ga0211644_1036508823300020416MarineFYDQWYRWRFLMYWLVLVLSISGMPDINMEVKMGSYFTCSLAKQKFIDGNPPNIFVKGKAKKSNLHSIECIKKD
Ga0211528_1002443533300020417MarineMYWLVLVLSISGMPDMQMEMKMGSYFTCTIAKQKFEDANPPTVIINGKDKTSTFNNIECVKRTT
Ga0211512_1015156423300020419MarineMYWLVLVLSISGMPDITIENKMGSYITCSIAKQKFIDGNPPTITVKGKKKQAEFNGIECIKK
Ga0211653_1002149343300020421MarineCGIQRKHIYYQWNGWRFLMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKKSSFTSIDCLKKG
Ga0211702_1019961223300020422MarineMYWLVLVLSIAGMPDITIENKMGSYITCSIAKQKFIDGNPPTIFVKGKEKKSHWSDIKCIKKQ
Ga0211565_1000963783300020433MarineMYWLVLVLSISGMPDINMEVKMGSYFTCSLAKQKFIDGNPPNIFVKGKAKKSNLHSIECIKKD
Ga0211708_1043167523300020436MarineYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTHIDCEKKGS
Ga0211558_1027791913300020439MarineKHIYYQWNGWRFLMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSSFTSIECVKKGS
Ga0211559_1000684863300020442MarineMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFSSIKCLKKGS
Ga0211559_1035905213300020442MarineSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSSFTSIECVKKGN
Ga0211574_1000070423300020446MarineMYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTYIECEKKGNS
Ga0211574_1000684213300020446MarineYDQWYRWRFLMYWLVLVLSISGMPDINMQVKMGSYFTCNIAKQKFIDGNPPSIFVKGKAKKSNLHSIECVKKD
Ga0211574_1000802693300020446MarineMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFTSIECVKKGK
Ga0211574_1001545143300020446MarineMYWLVLVLSIAGMPDITIENRMGSYIACNIAQNKFIDSNPPTIFVKGKEKKSKWSDIKCIKKQ
Ga0211574_1026809123300020446MarineMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSSFTSIECVKKGN
Ga0211574_1037668633300020446MarineMYWLALVLSVAGSPDLHMEMKMGSYFTCSLAKQKFEDSNPPNVFIKGKQKKSSFKDIKCVKKG
Ga0211574_1039949823300020446MarineVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIKGKEKKSNFSSIKCLKKGS
Ga0211638_1004399323300020448MarineMYWLVLILSVTGMPDMQMEMKMGNYFTCSLAKQKFEDANPPNIIIKGKQKKSSFNNIECVKKG
Ga0211664_1058157623300020455MarineMYWLVLVLSISGMPDITIENKMGSYITCSIAKQKFIDGNPPIITVKGKKRQAEFEGIECIKK
Ga0211676_10007481113300020463MarineMYWLVLVLSISGMPDIRIENQMGGYFTCQIAKQKFVDANPPTIIIKGKEKKSSFTYIECEKKGNS
Ga0211676_1001407563300020463MarineMYWLVLGLSVSGMPDMQMEMKMGSYFTCSIAKQKFEDSNPPNVFIEGKQKESNFESINCVKKD
Ga0211676_1004550323300020463MarineLYWLVLVLSVSGMPDMQMEMKMGNYFTCSIAKQKFEDANPPTVIIKGKNKKSAFNSIECVKRDT
Ga0211577_1045769623300020469MarineMYWLVLILSVAGMPDMQMEMKMGNYFTCSIAKQKFEDANPPNVIIDGKYKKSAFNSIECIRRDT
Ga0211614_1015936913300020471MarineMYWLVLVLSISGMPDMQMEMKMGSYFTCTIAKQKFEDANPPNVIIKGKQKKSNFNSIQCVKRNT
Ga0211614_1042151123300020471MarineMYWLVLVMSISGMPDMQMEMKMGSYFTCTIAKQKFEDANPPNVIIKGKQKKSNFNSIECIKRNT
Ga0213858_1010817213300021356SeawaterMPDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKQSSFTSIDCLKKG
Ga0213859_1007856233300021364SeawaterMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIINGKEKQSTFTSIDCLKKG
Ga0224906_122733213300022074SeawaterMYWLVLGLSVSGMPDMQMEMKMGSYFTCSIAKQKFEDSNPPNVFIEGKQKESTFDSIECVKKG
Ga0255743_1013244413300023110Salt MarshMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFEDANPPNIIIDGKEKRSNFTSIDCLKKG
Ga0209634_1007150113300025138MarineMYWLVLILSVAGMPDMQMEMKMGNYWTCNIAKQKFEDANPPNVTIEGEQKKSSFDSINCVKKG
Ga0209645_122540223300025151MarineMYWLVLVLSISGMPDITMENQMGGYFTCQIAKQKFVDANPPNIIIEGKEKKSSFTSIECIKKG
Ga0209433_1012293533300027774MarineFYYQWYRWRFLMYWLVLVLSISGMPDITIENQMGGYFTCQIAKQKFVDANPPNIIIKGKEKKSSFTNIECVKK
Ga0310343_10000068493300031785SeawaterMYWLVLVLSIAGMPDITIKNQMGSYITCSIAKQKFIDGNPPTIFVKGKEKKSHWSDIKCIKKQ
Ga0310343_1007655663300031785SeawaterMYWLAVVVSIAGSPDIQMEMKMGSYFTCSLAKQKFEDSNPPTVFIEGKQKKSSFKDIKCVKKG
Ga0310343_1025365233300031785SeawaterMYWLVLVLSISGMPDINMQVKMGSYFTCNIAKQKFIDGNPPSIFVKGKAKKSNLHSIECVKKD
Ga0310343_1072735733300031785SeawaterRFLMYWLVLVLSISGMPDITIENEMGGYFTCKIAQQKFIDANPPNIIINSKAKKSSFTSIECVKKGN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.