Metagenome Family F096701

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096701
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	40 residues
Representative Sequence	MPNEIAPRQSTLACILTDIHFWVPVAVLIGGLVLLTFLR
Number of Associated Samples	73
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.58 %
% of genes near scaffold ends (potentially truncated)	20.19 %
% of genes from short scaffolds (< 2000 bps)	67.31 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.962 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (46.154 % of family members)
Environment Ontology (ENVO)	Unclassified (39.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.923 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.27% β-sheet: 0.00% Coil/Unstructured: 53.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00583	Acetyltransf_1	35.58
PF07857	TMEM144	29.81
PF12697	Abhydrolase_6	2.88
PF00294	PfkB	1.92
PF12695	Abhydrolase_5	1.92
PF00561	Abhydrolase_1	0.96
PF13544	Obsolete Pfam Family	0.96
PF04366	Ysc84	0.96
PF08240	ADH_N	0.96
PF12704	MacB_PCD	0.96
PF14602	Hexapep_2	0.96
PF00482	T2SSF	0.96
PF13673	Acetyltransf_10	0.96
PF13692	Glyco_trans_1_4	0.96
PF04389	Peptidase_M28	0.96
PF03279	Lip_A_acyltrans	0.96
PF00535	Glycos_transf_2	0.96
PF00156	Pribosyltran	0.96
PF13432	TPR_16	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.96
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.96
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.96 %
Unclassified	root	N/A	24.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.96 %
Unclassified	root	N/A	24.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.96 %
Unclassified	root	N/A	24.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.58 %
Unclassified	root	N/A	24.04 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	9.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.08 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	9.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.04 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.12 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	9.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.04 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.12 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.04 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.62 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.04 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.62 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001089\|JGI12683J13190_1001094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3945	Open in IMG/M
3300001545\|JGI12630J15595_10051268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	825	Open in IMG/M
3300001593\|JGI12635J15846_10759870	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300002906\|JGI25614J43888_10000230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15378	Open in IMG/M
3300002910\|JGI25615J43890_1080930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	568	Open in IMG/M
3300005435\|Ga0070714_100386844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1320	Open in IMG/M
3300005439\|Ga0070711_101596529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	570	Open in IMG/M
3300005518\|Ga0070699_100414308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1219	Open in IMG/M
3300005526\|Ga0073909_10200401	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	862	Open in IMG/M
3300005537\|Ga0070730_10001240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24891	Open in IMG/M
3300005537\|Ga0070730_10233741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1218	Open in IMG/M
3300005545\|Ga0070695_100026526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3585	Open in IMG/M
3300007255\|Ga0099791_10357236	Not Available	700	Open in IMG/M
3300007258\|Ga0099793_10014904	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300007265\|Ga0099794_10325191	Not Available	798	Open in IMG/M
3300007265\|Ga0099794_10624375	Not Available	571	Open in IMG/M
3300009038\|Ga0099829_10448781	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300009088\|Ga0099830_10360491	Not Available	1170	Open in IMG/M
3300009088\|Ga0099830_10736475	Not Available	812	Open in IMG/M
3300010159\|Ga0099796_10307684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	673	Open in IMG/M
3300011269\|Ga0137392_11061684	Not Available	665	Open in IMG/M
3300011269\|Ga0137392_11337847	Not Available	575	Open in IMG/M
3300011270\|Ga0137391_10344430	Not Available	1281	Open in IMG/M
3300012189\|Ga0137388_10925083	Not Available	806	Open in IMG/M
3300012189\|Ga0137388_11125949	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300012202\|Ga0137363_10290185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1340	Open in IMG/M
3300012202\|Ga0137363_10309190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1299	Open in IMG/M
3300012202\|Ga0137363_11804845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300012203\|Ga0137399_10553979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	966	Open in IMG/M
3300012203\|Ga0137399_10778475	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012203\|Ga0137399_11489182	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012361\|Ga0137360_10982527	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300012362\|Ga0137361_10131694	Not Available	2215	Open in IMG/M
3300012683\|Ga0137398_10373943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	967	Open in IMG/M
3300012685\|Ga0137397_11202641	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300012917\|Ga0137395_10516057	Not Available	861	Open in IMG/M
3300012918\|Ga0137396_10736513	Not Available	726	Open in IMG/M
3300012925\|Ga0137419_10231795	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300012927\|Ga0137416_10324870	Not Available	1282	Open in IMG/M
3300012927\|Ga0137416_11391539	Not Available	635	Open in IMG/M
3300015241\|Ga0137418_10011673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8095	Open in IMG/M
3300015241\|Ga0137418_10027976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5220	Open in IMG/M
3300015264\|Ga0137403_10008736	All Organisms → cellular organisms → Bacteria	11332	Open in IMG/M
3300020140\|Ga0179590_1007128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2268	Open in IMG/M
3300020199\|Ga0179592_10297446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	718	Open in IMG/M
3300020579\|Ga0210407_10010939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6761	Open in IMG/M
3300020579\|Ga0210407_10027880	All Organisms → cellular organisms → Bacteria → Acidobacteria	4200	Open in IMG/M
3300020579\|Ga0210407_10054069	All Organisms → cellular organisms → Bacteria → Acidobacteria	3000	Open in IMG/M
3300020579\|Ga0210407_10722533	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300020579\|Ga0210407_11184812	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300020580\|Ga0210403_10006151	All Organisms → cellular organisms → Bacteria → Acidobacteria	10103	Open in IMG/M
3300020581\|Ga0210399_10714175	Not Available	823	Open in IMG/M
3300020583\|Ga0210401_10082495	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300021088\|Ga0210404_10004081	All Organisms → cellular organisms → Bacteria → Acidobacteria	5894	Open in IMG/M
3300021168\|Ga0210406_10003039	All Organisms → cellular organisms → Bacteria → Acidobacteria	18679	Open in IMG/M
3300021170\|Ga0210400_10006862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9510	Open in IMG/M
3300021171\|Ga0210405_10075833	All Organisms → cellular organisms → Bacteria	2649	Open in IMG/M
3300021171\|Ga0210405_10943305	Not Available	653	Open in IMG/M
3300021404\|Ga0210389_11088048	Not Available	618	Open in IMG/M
3300021478\|Ga0210402_11420202	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300021559\|Ga0210409_10117029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2452	Open in IMG/M
3300024330\|Ga0137417_1270541	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300024330\|Ga0137417_1436734	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300025905\|Ga0207685_10587592	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	596	Open in IMG/M
3300025916\|Ga0207663_11274606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300026304\|Ga0209240_1000065	All Organisms → cellular organisms → Bacteria	37369	Open in IMG/M
3300026319\|Ga0209647_1351331	Not Available	500	Open in IMG/M
3300026320\|Ga0209131_1000965	All Organisms → cellular organisms → Bacteria → Acidobacteria	19835	Open in IMG/M
3300026514\|Ga0257168_1133035	Not Available	554	Open in IMG/M
3300026555\|Ga0179593_1087593	All Organisms → cellular organisms → Bacteria	3159	Open in IMG/M
3300026555\|Ga0179593_1369644	All Organisms → cellular organisms → Bacteria	3712	Open in IMG/M
3300027643\|Ga0209076_1009424	All Organisms → cellular organisms → Bacteria → Acidobacteria	2472	Open in IMG/M
3300027645\|Ga0209117_1000218	All Organisms → cellular organisms → Bacteria	33084	Open in IMG/M
3300027671\|Ga0209588_1275963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300027674\|Ga0209118_1103496	Not Available	803	Open in IMG/M
3300027821\|Ga0209811_10220579	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300027846\|Ga0209180_10483816	Not Available	694	Open in IMG/M
3300027846\|Ga0209180_10638174	Not Available	585	Open in IMG/M
3300027857\|Ga0209166_10001018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25203	Open in IMG/M
3300027862\|Ga0209701_10116138	All Organisms → cellular organisms → Bacteria → Acidobacteria	1661	Open in IMG/M
3300027903\|Ga0209488_10359025	Not Available	1082	Open in IMG/M
3300027903\|Ga0209488_10408277	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300027903\|Ga0209488_10467395	Not Available	927	Open in IMG/M
3300028047\|Ga0209526_10161060	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300028536\|Ga0137415_10086385	All Organisms → cellular organisms → Bacteria	2994	Open in IMG/M
3300028536\|Ga0137415_10280603	All Organisms → cellular organisms → Bacteria → Acidobacteria	1471	Open in IMG/M
3300028536\|Ga0137415_10331951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1324	Open in IMG/M
3300031715\|Ga0307476_10021694	All Organisms → cellular organisms → Bacteria → Acidobacteria	4179	Open in IMG/M
3300031718\|Ga0307474_10805635	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300031753\|Ga0307477_10021300	All Organisms → cellular organisms → Bacteria	4428	Open in IMG/M
3300031753\|Ga0307477_10055035	All Organisms → cellular organisms → Bacteria	2736	Open in IMG/M
3300031753\|Ga0307477_10145023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1656	Open in IMG/M
3300031753\|Ga0307477_10213108	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300031754\|Ga0307475_10059329	All Organisms → cellular organisms → Bacteria	2898	Open in IMG/M
3300031754\|Ga0307475_10097079	All Organisms → cellular organisms → Bacteria → Acidobacteria	2294	Open in IMG/M
3300031820\|Ga0307473_10631766	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031823\|Ga0307478_10135730	All Organisms → cellular organisms → Bacteria → Acidobacteria	1942	Open in IMG/M
3300031823\|Ga0307478_11263605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300031962\|Ga0307479_10006987	All Organisms → cellular organisms → Bacteria → Acidobacteria	10395	Open in IMG/M
3300031962\|Ga0307479_10542062	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300031962\|Ga0307479_10587793	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300031962\|Ga0307479_11526262	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300032174\|Ga0307470_10891136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	698	Open in IMG/M
3300032180\|Ga0307471_100628852	Not Available	1234	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.46%
Loam	Environmental → Terrestrial → Soil → Loam	11.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	46.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	16.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12683J13190_10010942	3300001089	Forest Soil	MPKETAPQQSRFASILTDIHFWVPVAVLIGGLVLLKFLR*
JGI12630J15595_100512682	3300001545	Forest Soil	MQPNKTASRTASILTDIHFWVPVAVLIAGLLLLRSLH*
JGI12635J15846_107598702	3300001593	Forest Soil	MRNETASRQSTFACILTDIHFWVPVAVLIAGLLLLRSFR*
JGI25614J43888_1000023014	3300002906	Grasslands Soil	MPNEITPRQSTLASVLTDIHFWVPVAVLIGGLVLLTFLH*
JGI25615J43890_10809301	3300002910	Grasslands Soil	MPNEITSRQSTLASVLTDIHFWVPVAVLIGGLVLLTFLR*
Ga0070714_1003868442	3300005435	Agricultural Soil	MPNETAPRQQRTLASILTDIHFWVPVAVLIGGLTLLTFLR*
Ga0070711_1015965291	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEITRQQIAPKQSTLACILTDVHFWVPVGVLIAGLLLLRSIH*
Ga0070699_1004143081	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPNETAPRQSTLACILTDIHFWVPVGVLIAGLLLLRSLS*
Ga0073909_102004012	3300005526	Surface Soil	MSNETTTRPSTLACILTDIHFWVPVGVLVAGLLLLRSLS*
Ga0070730_100012405	3300005537	Surface Soil	MSNEISPRPSTFASILTDIHFWVPVAVLIGGLVLLTYLR*
Ga0070730_102337412	3300005537	Surface Soil	MPNANANAPRQSTLHCILTDIHFWVPVAVLAAGLILLSLLS*
Ga0070695_1000265262	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPGEIAPKQSTLACILTDVHFWVPVVVLIAGLLLLHSLS*
Ga0099791_103572361	3300007255	Vadose Zone Soil	RMPNETAPRRSTFACIFTDIHFWVPVGVLIAGLLLLRSLS*
Ga0099793_100149042	3300007258	Vadose Zone Soil	MPNEIAPRQSTLACILTDIHFWVPVAVLIGGLVLLRFIR*
Ga0099794_103251912	3300007265	Vadose Zone Soil	MPNEIASRQSTFASILTDVHFWVPVAVLIGGLVLLTFLR*
Ga0099794_106243751	3300007265	Vadose Zone Soil	GRMPNEITSRQSTLASVLTDIHFWVPVAVLIGGLVLLTFLR*
Ga0099829_104487812	3300009038	Vadose Zone Soil	MPNEIAPRQSTLASVLTDIHFWVPVAVLIGGLVLLTFLR*
Ga0099830_103604912	3300009088	Vadose Zone Soil	MPNETAPRQGTLASILTDIHFWVPVAVLIGGLVLLAFLR*
Ga0099830_107364752	3300009088	Vadose Zone Soil	MPNEIASRQSTFASVLTDIHFWVPVAVLIGGLVLLTFLR*
Ga0099796_103076842	3300010159	Vadose Zone Soil	MPNETAPRQSTLACILTDVHFWVPVGVLIAGLLLLRSLS*
Ga0137392_110616841	3300011269	Vadose Zone Soil	QKGRMPNEITPRQSTLASVLTDIHFWVPVAVLIGGLVLLTFLH*
Ga0137392_113378472	3300011269	Vadose Zone Soil	MPNETAPRQGTLASILTDIHFWVPVAVLIGGLVLLTFLR*
Ga0137391_103444301	3300011270	Vadose Zone Soil	MPNEITSPQSTLASVLTDIHFWVPVAVLIGGLVLLTFLR*
Ga0137388_109250832	3300012189	Vadose Zone Soil	FRKGRMPNEIASRQSTFASILTDVHFWVPVAVLIGGLVLLTFLR*
Ga0137388_111259492	3300012189	Vadose Zone Soil	MPNEIAPRQSTLACILTDIHFWVPVAVLIGGLVLLTFLR*
Ga0137363_102901852	3300012202	Vadose Zone Soil	MPNETAPRQSTFASILTDIHFWVPVAVLIGGLVLLTFLR*
Ga0137363_103091902	3300012202	Vadose Zone Soil	MPTDIAPKQSRLVCILTDVHFWVPVAVLIAGLLLLHSLS*
Ga0137363_118048452	3300012202	Vadose Zone Soil	MPNEIAPRQSTLASILTDIHFWVPVAVLIGGLVLLRFIR*
Ga0137399_105539792	3300012203	Vadose Zone Soil	MPNETAPQQSTLACILTDIHFWVPVSVLIAGLLLLRSLS*
Ga0137399_107784752	3300012203	Vadose Zone Soil	MPTDIAPKQSRLACILTDVHFWVPVAVLIAGILLLHSLS*
Ga0137399_114891822	3300012203	Vadose Zone Soil	MPNETAPRQSTLACILSDIHFWVPLGVLIAGLLLLRSL
Ga0137360_109825272	3300012361	Vadose Zone Soil	MPNETAPRQSTLACILTDIHFWVPVGVLIAGLLLLR
Ga0137361_101316942	3300012362	Vadose Zone Soil	MPTDIAPKQSTLACILTDVHFWVPVAVLIAGLLLLHSLS*
Ga0137398_103739432	3300012683	Vadose Zone Soil	MPNETAPHQSTLACILTDIHFWVPLGVLIAGLLLLRSLS*
Ga0137397_112026412	3300012685	Vadose Zone Soil	MPNEAAPRQTTLACIPTDIHFWVPVGVLIAGLLLLRSLS*
Ga0137395_105160571	3300012917	Vadose Zone Soil	RMPNETAPRQSTLACILTDIHFWVPLGVLIAGLLLLRSLS*
Ga0137396_107365132	3300012918	Vadose Zone Soil	MPNEITPRQSTLASILTDIHFWVPVAVLIGGLVLLTFLR*
Ga0137419_102317952	3300012925	Vadose Zone Soil	MPNETAPQQSTLACILTDIHFWVPLGVLIAGLLLLRSLS*
Ga0137416_103248702	3300012927	Vadose Zone Soil	MPKEIAPRQSTLACILTDIHFWVPVAVLIGGLVLLTFLR*
Ga0137416_113915392	3300012927	Vadose Zone Soil	MPGDIAPKQSTLACILTDVHFWVPVVVLIAGLLLLHSLS*
Ga0137418_100116732	3300015241	Vadose Zone Soil	MPNEITSRQSTLACILTDIHFWVPVAVLIGGLVLLTFLR*
Ga0137418_100279765	3300015241	Vadose Zone Soil	MPNETAPRQSTLACILSDIHFWVPLGVLIAGLLLLRSLS*
Ga0137403_100087365	3300015264	Vadose Zone Soil	MPNETAPRQSTLACILTDIHFWVPLGVLIAGLLLLRSLS*
Ga0179590_10071282	3300020140	Vadose Zone Soil	MPNETAPHQSTLACILTDIHFWVPLGVLIAGLLLLRSLS
Ga0179592_102974462	3300020199	Vadose Zone Soil	MPTDIAPKQSTLACILTDVHFWVPVAVLIAGLLLLHSLS
Ga0210407_100109394	3300020579	Soil	MPNEIAPRQSTLASILTDIHFWVPVAVLIGGLVLLAFLR
Ga0210407_100278804	3300020579	Soil	MPNETAPRQSTFASILTDIHFWVPVAVLIGGLVLLTFLR
Ga0210407_100540693	3300020579	Soil	MPNEIAPRQSTLASILTDIHFWVPVAVLIGGLVLLMFLR
Ga0210407_107225332	3300020579	Soil	MPNEIAPRQSTLTSILTDIHFWVPVAVLIGGLVLLTFLR
Ga0210407_111848122	3300020579	Soil	MPNEIAPRQSTFASILTDIHFWVPVAVLIGGLVLLTFLH
Ga0210403_100061512	3300020580	Soil	MPNDIAPRQSTLASILTDIHFWVPVAVLIGGLVLLAFLR
Ga0210399_107141751	3300020581	Soil	RLFLRKGGMPTEIAPKQSTLASILSDIHFWVPVAVLIAGLLLLRSLH
Ga0210401_100824953	3300020583	Soil	MLKEIAPKQSTLASIFTDVHFWVPVAVLIAGLLLLRSLH
Ga0210404_100040812	3300021088	Soil	MQPKDGLPQPSRFASIFTDIHFWVPVAVLIGGLVLLTFLH
Ga0210406_100030395	3300021168	Soil	MPTEIAPKQSTLASILSDIHFWVPVAVLIAGLLLLRSLH
Ga0210400_100068624	3300021170	Soil	MQPKNGSPQQSTLASIFTDIHFWVPVAVLIGGLVLLTFLH
Ga0210405_100758333	3300021171	Soil	MRNEPASRQSTFVCILTDIHFWVPVVVLVAGLLLLRSLR
Ga0210405_109433052	3300021171	Soil	MPNEIAPRQSTLASILTDIHFWVPVALLVGGLVLLAFLR
Ga0210389_110880481	3300021404	Soil	MSNTNTAAPKTQSRVSTILSDVQFWVPVVVLIAGLLLLRFIH
Ga0210402_114202022	3300021478	Soil	MPNEIASRQSTFASILTDIHFWVPVAVLIGGLVLLTFLR
Ga0210409_101170291	3300021559	Soil	KGYMRNEPASRQSTFVCILTDIHFWVPVVVLVAGLLLLRSLR
Ga0137417_12705412	3300024330	Vadose Zone Soil	MQPKDGLPQQSRFASIFTDIHFWVPVAVLIGGLVLLTFLH
Ga0137417_14367342	3300024330	Vadose Zone Soil	MPNEIAPRQSTLACILTDIHFWVPVAVLIGGLVLLT
Ga0207685_105875921	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEITRQEIAPKQSTLACILTDVHFWVPVGVLIAGLLLLRSIH
Ga0207663_112746062	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEITRQQIAPKQSTLACILTDVHFWVPVGVLIAGLLLLRSIH
Ga0209240_10000657	3300026304	Grasslands Soil	MPNEITPRQSTLASVLTDIHFWVPVAVLIGGLVLLTFLH
Ga0209647_13513311	3300026319	Grasslands Soil	KAGMPGEIAPKQSTLASIFTDVHFWVPVAVLIAGLFLLSYIQ
Ga0209131_10009654	3300026320	Grasslands Soil	MPPEITRQQIAPKQSTLACILTDVHFWVPVAVLIAGLLLLRSLH
Ga0257168_11330352	3300026514	Soil	MPNEITSRQSTLASVLTDIHFWVPVAVLIGGLVLLTFLR
Ga0179593_10875933	3300026555	Vadose Zone Soil	MPDEAAPRQSTLACVLTDIHFWVPLGVLIAGLLLLRSLS
Ga0179593_13696441	3300026555	Vadose Zone Soil	MPNETAPRQSTLACILSDIHFWVPLGVLIAGLLLLRSSQLTSACNR
Ga0209076_10094242	3300027643	Vadose Zone Soil	MPNEIAPRQSTLACILTDIHFWVPVAVLIGGLVLLRFIR
Ga0209117_100021812	3300027645	Forest Soil	MPKETAPQQSRFASILTDIHFWVPVAVLIGGLVLLKFLR
Ga0209588_12759632	3300027671	Vadose Zone Soil	GRMPNEITSRQSTLASVLTDIHFWVPVAVLIGGLVLLTFLR
Ga0209118_11034961	3300027674	Forest Soil	IAAPLFRKGGMPKETAPQQSRFASILTDIHFWVPVAVLIGGLVLLKFLR
Ga0209811_102205791	3300027821	Surface Soil	MSNETTTRPSTLACILTDIHFWVPVGVLVAGLLLLRSLS
Ga0209180_104838161	3300027846	Vadose Zone Soil	MPNEIASRQSTFASILTDVHFWVPVAVLIGGLVLLTFLR
Ga0209180_106381741	3300027846	Vadose Zone Soil	MPNETAPRQGTLASILTDIHFWVPVAVLIGGLVLLAFLR
Ga0209166_1000101821	3300027857	Surface Soil	MSNEISPRPSTFASILTDIHFWVPVAVLIGGLVLLTYLR
Ga0209701_101161382	3300027862	Vadose Zone Soil	MPNEIASRQSTFASVLTDIHFWVPVAVLIGGLVLLTFLR
Ga0209488_103590252	3300027903	Vadose Zone Soil	PNETAPRQGTLASILTDIHFWVPVAVLIGGLVLLAFLR
Ga0209488_104082771	3300027903	Vadose Zone Soil	MPTDIAPKQSTLACIFTDVHFWVPVAVLIAGLLLL
Ga0209488_104673952	3300027903	Vadose Zone Soil	LRPSLGKGRMPNETAPRQSTLACILTDIHFWVPVGVLIAGLLLLRSLS
Ga0209526_101610603	3300028047	Forest Soil	MQPKDGLPQQSRFASIFTDIHFWVPVAVLIGGLVLLTFL
Ga0137415_100863852	3300028536	Vadose Zone Soil	MQTKDGLPQQSRFASIFTDIHFWVPVAVLAGGLVLLTFLH
Ga0137415_102806032	3300028536	Vadose Zone Soil	MPNEITSRQSTLACILTDIHFWVPVAVLIGGLVLLTFLR
Ga0137415_103319512	3300028536	Vadose Zone Soil	MPNETAPRQSTLACILTDIHFWVPLGVLIAGLLLLRSLS
Ga0307476_100216944	3300031715	Hardwood Forest Soil	MPNESAPRQSTFASILTDVHFWVPVGVLIAGLLLLRWLS
Ga0307474_108056352	3300031718	Hardwood Forest Soil	MPDEIAPRQSTLASILTDIHFWVPVAVLIGGLVLLAFLR
Ga0307477_100213003	3300031753	Hardwood Forest Soil	MPNESAPRQSTFASIVTDIHFWVPVGVLIAGLLLLRWLS
Ga0307477_100550352	3300031753	Hardwood Forest Soil	MPNEIAPRQSTLASILTDIHFWVPVAVLIGGLVLLTFLS
Ga0307477_101450232	3300031753	Hardwood Forest Soil	MPNEIASRQSMLASILTDIHFWVPVAVLIGGLVLLTFLR
Ga0307477_102131082	3300031753	Hardwood Forest Soil	MPNEVAPRQSTLASILTDIHFWVPVAVLIGGLVLLTFLR
Ga0307475_100593293	3300031754	Hardwood Forest Soil	MPNEIASRQSMLASVLTDIHFWVPVAVLIGGLVLLTFLR
Ga0307475_100970792	3300031754	Hardwood Forest Soil	MLNEIAPRQSTPARILTDIHFWVPVAVLIGGLVLLTFLR
Ga0307473_106317662	3300031820	Hardwood Forest Soil	MPNEIAPRQSTFASILTDIHFWVPVAVLIGGLVLLTFLR
Ga0307478_101357302	3300031823	Hardwood Forest Soil	MPDEIAPRQSTLASILTDIHFWVPVALLIGGLVLLAFLR
Ga0307478_112636052	3300031823	Hardwood Forest Soil	MPNEVAPRQSTIACILTDIHFWVPVAVLIAGLLLLRSLS
Ga0307479_100069871	3300031962	Hardwood Forest Soil	MPNEIAPRQSTLASILTDIHFWVPVAVLIAGLALLTLLR
Ga0307479_105420622	3300031962	Hardwood Forest Soil	MPNEIAPRQGTFASILTDIHFWVPVAVLIGGLVLLTFLR
Ga0307479_105877932	3300031962	Hardwood Forest Soil	MPNEIAPRQSTLASILTDTHFWVPVAVLIGGLVLLTFLR
Ga0307479_115262621	3300031962	Hardwood Forest Soil	MQPKDGLPQPSRFASIFTDIHFWVPVAVLIGGLVLLTFL
Ga0307470_108911362	3300032174	Hardwood Forest Soil	MPNETSPRRNTIASILTDIHFWVPVVVLIGGLTLLTFLR
Ga0307471_1006288522	3300032180	Hardwood Forest Soil	MPNEIAPRQSTVASILTDIHFWVPVVVLVGGLVLLTFLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096701

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences