NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096696

Metagenome Family F096696

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096696
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 53 residues
Representative Sequence MDFSGASREEDEPKVISIGPDKDVVDWFIVTGSFPRDVPKQELLRACFDDVV
Number of Associated Samples 15
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 58.70 %
% of genes near scaffold ends (potentially truncated) 10.58 %
% of genes from short scaffolds (< 2000 bps) 44.23 %
Associated GOLD sequencing projects 10
AlphaFold2 3D model prediction Yes
3D model pTM-score0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.038 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(94.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(100.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.00%    β-sheet: 0.00%    Coil/Unstructured: 80.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.21
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF03732Retrotrans_gag 0.96



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.04 %
All OrganismsrootAll Organisms0.96 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300007265|Ga0099794_10298360Not Available834Open in IMG/M
3300007265|Ga0099794_10743220Not Available524Open in IMG/M
3300012205|Ga0137362_10638533Not Available917Open in IMG/M
3300012582|Ga0137358_10337929Not Available1020Open in IMG/M
3300012582|Ga0137358_10855852Not Available600Open in IMG/M
3300012918|Ga0137396_10738458Not Available725Open in IMG/M
3300012923|Ga0137359_10234439Not Available1638Open in IMG/M
3300012923|Ga0137359_10473802Not Available1106Open in IMG/M
3300012923|Ga0137359_10516850All Organisms → Viruses → Predicted Viral1052Open in IMG/M
3300012923|Ga0137359_10520071Not Available1049Open in IMG/M
3300012923|Ga0137359_10584880Not Available980Open in IMG/M
3300012923|Ga0137359_10591410Not Available974Open in IMG/M
3300012923|Ga0137359_10609881Not Available957Open in IMG/M
3300012923|Ga0137359_10623885Not Available944Open in IMG/M
3300012923|Ga0137359_10692505Not Available889Open in IMG/M
3300012923|Ga0137359_10698343Not Available884Open in IMG/M
3300012923|Ga0137359_10808704Not Available812Open in IMG/M
3300012923|Ga0137359_10818233Not Available806Open in IMG/M
3300012923|Ga0137359_10852614Not Available787Open in IMG/M
3300012923|Ga0137359_10881374Not Available772Open in IMG/M
3300012923|Ga0137359_10906256Not Available760Open in IMG/M
3300012923|Ga0137359_10932337Not Available747Open in IMG/M
3300012923|Ga0137359_10962872Not Available734Open in IMG/M
3300012923|Ga0137359_10989356Not Available722Open in IMG/M
3300012923|Ga0137359_11037376Not Available703Open in IMG/M
3300012923|Ga0137359_11046581Not Available699Open in IMG/M
3300012923|Ga0137359_11239629Not Available634Open in IMG/M
3300012923|Ga0137359_11275104Not Available623Open in IMG/M
3300012923|Ga0137359_11336190Not Available605Open in IMG/M
3300012923|Ga0137359_11336594Not Available605Open in IMG/M
3300012923|Ga0137359_11347611Not Available602Open in IMG/M
3300012923|Ga0137359_11352403Not Available600Open in IMG/M
3300012923|Ga0137359_11405022Not Available586Open in IMG/M
3300012923|Ga0137359_11443007Not Available576Open in IMG/M
3300012923|Ga0137359_11465108Not Available571Open in IMG/M
3300012923|Ga0137359_11589596Not Available542Open in IMG/M
3300012923|Ga0137359_11667577Not Available525Open in IMG/M
3300012923|Ga0137359_11704302Not Available518Open in IMG/M
3300012923|Ga0137359_11713177Not Available516Open in IMG/M
3300012924|Ga0137413_11066729Not Available637Open in IMG/M
3300012924|Ga0137413_11206115Not Available603Open in IMG/M
3300012925|Ga0137419_11182281Not Available640Open in IMG/M
3300012925|Ga0137419_11570530Not Available559Open in IMG/M
3300015054|Ga0137420_1008429Not Available715Open in IMG/M
3300015054|Ga0137420_1206572Not Available500Open in IMG/M
3300015054|Ga0137420_1371098Not Available1736Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil100.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0099794_1029836023300007265Vadose Zone SoilMDFSDASREENEPKVISIRPDKDVVNWFVVAVSFSRDVPEKELLRARFDDIVQ*
Ga0099794_1050279723300007265Vadose Zone SoilMVSIFKEEVDFLGASREENEPKVVSVGPDKDVVDWFVVAGSFSRNVPKQELLRACFDKIVQ*
Ga0099794_1074322023300007265Vadose Zone SoilMDFSSASREEDEPKVISIRPDKDVVHWFVVAVSFPRDVPKQELLRARFDNIVQ*
Ga0099794_1076674933300007265Vadose Zone SoilVDFSGASREEDEPKVVGIGPNKDVVDWFVEAGSFPRNM
Ga0099794_1078892513300007265Vadose Zone SoilMDFSGAARKENEPKVVGIGPNKDVVDWFIEASSFPRNMPKQELLRASFDDIVQ*
Ga0137363_1115590913300012202Vadose Zone SoilMYFPRASREEDKPKVVSIGPDKDVVNWFVVFVSFPRDVSKQELFQARFDDIVK*
Ga0137363_1121041923300012202Vadose Zone SoilVVSVFKEEMYFLGAAREEDKPKVVSVRPDKDVVDWFVVGVSFPRDVPKQELLRARFDNIVQ*
Ga0137363_1139185733300012202Vadose Zone SoilMYFPGASREENEPKVVSVGPDKDVVNWFIVGVSFPRDVPKQELL
Ga0137399_1138899913300012203Vadose Zone SoilMVSIFKEEMDFSGASREENEPKVISIRPDKDVVNWFVVAVSFSRDVPEKELLRA
Ga0137399_1139088913300012203Vadose Zone SoilTVSVFKEEMDFSSALRKENKPKVISTRPDKDVVDRFVVAVSFPRDVPKQELFGARFDDVV
Ga0137362_1063853323300012205Vadose Zone SoilMDFSGASRKENEPKVVGIGPNKDVVDWFIEAGSFPRNVPKQELLRAGFDKVVK*
Ga0137360_1052272333300012361Vadose Zone SoilMDFSGASREEDEPKVVGIGPNKDMVDRFVKASSFPRNVPKQELL*
Ga0137358_1033792923300012582Vadose Zone SoilMDFSGISREEDEPKVISIGPDKDVVNWFIVNVSFPRDMPKQELLRAHFDNVVQ*
Ga0137358_1065352723300012582Vadose Zone SoilMDFSGAAREENEPKIVGIGPDKDVVDWFVVVVSFSRDVPEKELLGARFDDIV*
Ga0137358_1080588023300012582Vadose Zone SoilMDFSGASGEEDKPKVISIRPDKDVVDWFVMTGSFPRDVPKQELF*
Ga0137358_1085585223300012582Vadose Zone SoilVDFSSASREEDEPKVISIRPDKDVVDWFVVAVSFSRDVPEKELLGARFDDIVQ*
Ga0137358_1093607813300012582Vadose Zone SoilMVSVFKEEMYFSGASREEDEPKVVSVGPDKDVVNWFVVAVSFSRDVPKKELL*
Ga0137396_1073845833300012918Vadose Zone SoilEELDFSGASRKENEPKVVGTGTNKDVVDWFVEAGSFPRNVPKQELLRAGFDKVVK*
Ga0137359_1013602733300012923Vadose Zone SoilMVSVFKEEMYFSGASREEGKPKVVCIGPNQDVVDWFVVVVSFPGDVPKQELLRACFDDIVQ*
Ga0137359_1021458023300012923Vadose Zone SoilMDFSGASRKEDEPKVIGIGPDKDVVNWFVVNVSFPRDVPKQELL*
Ga0137359_1023443923300012923Vadose Zone SoilMDFLGALREENEPKVISIGPDKDVVNWFIVTVSFPRDMPKKELLRACFDNIIQ*
Ga0137359_1037989723300012923Vadose Zone SoilMYFLGASREENKPKVVGVGPDKDMVDWFVVGVSFPRDMPKQELFRARFDDVVQ*
Ga0137359_1038035233300012923Vadose Zone SoilMVSVFKEEVYFLRALREENEPKVISIGPDKDVVDWFIVAVSFPRDVPKQELFGARFDDVVQ*
Ga0137359_1047380213300012923Vadose Zone SoilVFKEEVDFSGASRKENEPKVVGIGPNKDVVDWFVEVGSFPRNMPKQELLRASFDDIVQ*
Ga0137359_1051685023300012923Vadose Zone SoilMVSVFKEEMYFSGALREEDEPKVISIGPDKDVVDWFIEAGSFPRDVPKQELFGAHFDNIVQ*
Ga0137359_1052007133300012923Vadose Zone SoilFSGALREEDKPKVIGIGPDKDVVNWFVVNGSFPRDVPKQELL*
Ga0137359_1058488023300012923Vadose Zone SoilMYFSGASREEDEPKVVSVGPDKDVVNWFVVNVGFPRDVPKQELLRARLDNVIQ*
Ga0137359_1059141023300012923Vadose Zone SoilVVSVFKEEVYFSSASREENEPKVIGVGPDKDVVDWFIVIVGFPRDVPKQELLRARFDDVVQ*
Ga0137359_1060988123300012923Vadose Zone SoilMVSISKEEVYFSSALRKENESKVISIRPDKDVVDWFVVAVSFPRDVPKQELLGARFDNIVQ*
Ga0137359_1062388513300012923Vadose Zone SoilMDFLGASREEDEPEVISIGPDKDVINWFVVTGSFPRDVPKQELLRARFDDIIQ*
Ga0137359_1065076113300012923Vadose Zone SoilMDFSGASREEDEPEVISIGPDKDVVHWFIVAVSFPRDVPKQELLGARFEDVV*
Ga0137359_1069250533300012923Vadose Zone SoilGASGEEDEPKVISIRPDKDVVDWFIMTGSFPRDVPKQELF*
Ga0137359_1069834333300012923Vadose Zone SoilMDFSGASREEDKPKVINVGPDKDVVDWFIVVVSFPRDVPEQELLGAHFDDIVQ*
Ga0137359_1080546813300012923Vadose Zone SoilMDFPSASREENKPKVISIGPDKDVVNWFIVVVSFSRNVPEQELLRARFDDICHG*
Ga0137359_1080870423300012923Vadose Zone SoilMDFSGASREEDEPKVISIGPDKDVVNWFVEAGSFPRDVPKQELFRACFDDIVQ*
Ga0137359_1081823323300012923Vadose Zone SoilMDFPGALREENKPKVISIRPDKDVVDWFVVAVSLARDVPKKELLRARFDDIVK*
Ga0137359_1082174013300012923Vadose Zone SoilMDFSGASREEDEPKVVGVGPDKDMVDWFVVGVSFSRDMPKQELFRARFDDVVQ*
Ga0137359_1082735013300012923Vadose Zone SoilVYFPSASRKENEPKVVSVGPDKDVVDWFVVAGSFSRNVPKQELLRARFDKIVQ*
Ga0137359_1082803613300012923Vadose Zone SoilMDFLGASREENEPKVIGVRPDKDVVNWFVVAGSFSRNVPKQ*
Ga0137359_1085261423300012923Vadose Zone SoilMDFSGASRKENEPKVISVGPDKDVVDWFVVVVSFPRDVPEQELLRARFDNIVQ*
Ga0137359_1085319613300012923Vadose Zone SoilMVSIFKEEMYFLGASREEHEPKVVGIGPNKDVINWFIVVVSFSRDVPKKELLRA
Ga0137359_1088137423300012923Vadose Zone SoilMVSIFKEEVYFPSALRKENEPKVISIGPDKDVVDWFVVIVGFPRDVPEQELLGARFDDVIQ*
Ga0137359_1090625623300012923Vadose Zone SoilMASVFKEEMYVPRASREENEPKVVSIGLNQNVVNWFIVVVSFPRDVPKQELLRACFDNIVQ*
Ga0137359_1093233723300012923Vadose Zone SoilMDFSGASREENKPKVIGIGPDKDVVNWFIVTVSFPRDVPKQELFRASFDDIVQ*
Ga0137359_1095329913300012923Vadose Zone SoilVYFPSASREEDEPKVVGIGPNKDMVDRFVEAGSFSRDVPKQELLR
Ga0137359_1096287213300012923Vadose Zone SoilMVSVFKEEMDFSGASREENEPKVIGVRPDKDVVNWFVEASSFPRNVPK*
Ga0137359_1098868133300012923Vadose Zone SoilMDFSGALREENEPKVISIRPDKDVVDWFVVVVSFSRDVPKQELLGARLDDVI*
Ga0137359_1098935613300012923Vadose Zone SoilMYFSGALREEDEPKVVSVGPDEDVVHWFIVNVSFPRDVPKQELLRACLDDVV*
Ga0137359_1101150233300012923Vadose Zone SoilMYFSGDSREEDEPKVVSVGPDKDVVDWFIVGVSFPRDVPKQELLRA
Ga0137359_1101553213300012923Vadose Zone SoilMDFSSASREEDKPKIISIRPDKDVVHWFVVVVSFPRDVPKQELLGAHFDNIVK*
Ga0137359_1103737623300012923Vadose Zone SoilMDFSGAWREEDEPKVVGIGPNKDMVDRFVKAGSFPRNVPKQELLRASFDKIIK*
Ga0137359_1104658133300012923Vadose Zone SoilVFKEEVYFSSASRKENEPKVISIGPDKDVVNWFVVAVSFPRDVPKQELLGAHFDNVV*
Ga0137359_1119839723300012923Vadose Zone SoilEEDEPKVVGIGPNKDMVDRFVEAGSFSRDVPKQELLRAHFDDIVQ*
Ga0137359_1123962923300012923Vadose Zone SoilMVSIFKEEMDFSGASREEDEPKVVGIGPNKDMVDWFIEAGSFSRNVPKQELLRARFDDIIQ*
Ga0137359_1126965523300012923Vadose Zone SoilMVAVFKEEMDFSGALREEDKPKVISIGPDKDVVNWFVVAVSFPRDVPKQELLG
Ga0137359_1127510413300012923Vadose Zone SoilREEDEPKVIGIGPDKDVVDWFVVVVSFPRDVPEQELL*
Ga0137359_1129330423300012923Vadose Zone SoilMYFPSASREENKPEVICIGPDKDVVDWFIVVVGFPRDVPKQELLGACFDDVVQ*
Ga0137359_1130596923300012923Vadose Zone SoilMDFSGASREEDEPKVISIGPDKDVVDWFVKAGSFPRDVPKQELFGACFDDIVQ*
Ga0137359_1131286423300012923Vadose Zone SoilVDFLGALREENEPKVISVGPDKDVVDRFVEAGSFSRDVPKQELLRARFDDIV*
Ga0137359_1133158223300012923Vadose Zone SoilMDFSGASREEDKPGVISIGPDKDMVDWFIKAGSFPRDVPKQELFGARFDDIVQ*
Ga0137359_1133619023300012923Vadose Zone SoilMYFSGASREENEPKVVGIGPDKDVVDWFIIVVSFPRDVPKKELL*
Ga0137359_1133659423300012923Vadose Zone SoilMVSVFKKEMYFLSASREENKPEVICIGPDKDVVDWFVVFVSFPRDVPKQELFRAHFDDIVK*
Ga0137359_1134761123300012923Vadose Zone SoilMVSVFKEEMYFSGASGEEDEPKVVGIGPNKDMVYWFVEAGSFSRDVPK*
Ga0137359_1135240313300012923Vadose Zone SoilRKENEPKVISIGPDKDVVNWFVVAVSFPRDVPKQELLGAHFNNVV*
Ga0137359_1135714113300012923Vadose Zone SoilMVSVFKKKVDFSGALREENEPKVISVGPDKDMVDWFIVGVSFPRDMPKQELLQAGFDDVIQ*
Ga0137359_1140502213300012923Vadose Zone SoilMVSIFKEEVYFSSALREENKPKVICIGSDKDVVDWFVVVVSFSRDVPKQELLRAHFDNVVQ*
Ga0137359_1144300713300012923Vadose Zone SoilMDFSGASREEDEPEVISIGPDKDMVDWFVEAGSFPRDVPKKELLRARFDDIIQ*
Ga0137359_1144635813300012923Vadose Zone SoilMDFSSASREEDKPKVISIRPDKDVVHWFVMAVSFPRDVPKQELLRARFEDVV*
Ga0137359_1146510823300012923Vadose Zone SoilMVSVFKEEMDFSGAAREENEPKIVGIGPDKDVVDWFIVVVSFSRDVPKKELLRARLDDIVK*
Ga0137359_1147028013300012923Vadose Zone SoilMDFSGAARKENEPKVVGIGPNKDVVDWFVEAGSFPRDVPK*
Ga0137359_1149687123300012923Vadose Zone SoilMDFSGASREEDEPKVIGVGPDKDVVDWFIVVVSFPRDVPEQELLGACFDDIVQ*
Ga0137359_1152917823300012923Vadose Zone SoilMDFSGASREESEPKVISIRPDKDVVDWFVVAVSFSRDVPEKELLGAHFDDIVQ*
Ga0137359_1153330833300012923Vadose Zone SoilMVSVFKEEMDFSGASREENKPKVISIGPDKDVVDWFVVVVGFPRDVPKQELLRA
Ga0137359_1155113113300012923Vadose Zone SoilMDFSGASREEDEPKVIGIGPDKDVVNWFIVAVSFSRDVPEKELLGAHFDDIVQ*
Ga0137359_1158588523300012923Vadose Zone SoilVVSVFKEEMYFPSASREENEPKVVGIGPNKDVVNWFVEAGSFPRDMPKQELF*
Ga0137359_1158959623300012923Vadose Zone SoilMDFSGASREEDEPKVVGIRPNKDMVDRFIKAGSFSRDVPKKELLRAHLDDIIK*
Ga0137359_1162142323300012923Vadose Zone SoilMYFPSASREENKPKVIGIRPDKDVVDWFVVAVSFSRDVPEKELLRARFDDIIQ*
Ga0137359_1163455423300012923Vadose Zone SoilMDFLGASGEEDEPKVISIRPDKDVVDWFVMTGSFPRDV
Ga0137359_1163570013300012923Vadose Zone SoilPKVISIGPDKDVVNWFVVAVSFPRDVPKQELLGACFEDVV*
Ga0137359_1166757713300012923Vadose Zone SoilMYFPGASREENEPKVVSVGPDKNVVDWFIVVVSFSRDMPKQELFGARFDDVVQ*
Ga0137359_1168147213300012923Vadose Zone SoilGASREENKPKVVGVGPDKDMVNWFVVGVSFPRDMPKQELFRACFDDVIQ*
Ga0137359_1170430213300012923Vadose Zone SoilVDLSGASREENEPKVIGVRPDKDVVNWFVVIVGFPRDVPK*
Ga0137359_1171317713300012923Vadose Zone SoilKEEMDFSGASREENEPKVISIRPDKDVVDWFIVAVSFSRDVPKKELLRARFDDIVK*
Ga0137413_1027760123300012924Vadose Zone SoilMYFPSALREENKPEVICIGPDKDVVDWFVVVVSFSRDVPEKELLGARFDDIV*
Ga0137413_1106672913300012924Vadose Zone SoilEINMVSVFKEEMYFSGASREEGKPKVVCIGPNQDVVDWFVVVVSFPGDVPKQELLRARFDDIVQ*
Ga0137413_1120611523300012924Vadose Zone SoilMDFLGALREEDEPKVVGIGPNKDMVDRFVKAGSFPRNVPKQELL*
Ga0137413_1161133913300012924Vadose Zone SoilMDFLGASREENEPKVISIRPDKDVVDWFIVAVSFSRDVPKKELL*
Ga0137419_1114779523300012925Vadose Zone SoilVVSVFKEEMYFPSASREEDEPKVVSIGPNKDVVNRFIVGVSFPRDVPKQELL*
Ga0137419_1118228123300012925Vadose Zone SoilMYFSGASREEGKPKVVGIGPNQDVVDWFVVVVSFPGDVPKQELLRARFDNIVQ*
Ga0137419_1121278813300012925Vadose Zone SoilMDFSGALREENEPKVISIGPDKDVINWLVVAVSFPRDVPKQELLRARFDDIVQ*
Ga0137419_1139205413300012925Vadose Zone SoilVSVFKEEMDFSGASRKENEPKVVGIGPNKDVVDWFVEISSFPRNVPK*
Ga0137419_1157053013300012925Vadose Zone SoilMYFSGASREENKPKVISVGPDKDVVDWFVVAVSFSRDVPEKELLGACFDDIVQ*
Ga0137414_108353223300015051Vadose Zone SoilMDFSGASRKENEPKVVGIGPNKDVVDWFVEAGSFPRNVPKQELLRAGFDKVVK*
Ga0137420_100842933300015054Vadose Zone SoilTVSVFKEEVDFSSASRKENEPKVVGIGPNKDVVDWFVEVSSFPRNVPKQELLRASFDNIVQ*
Ga0137420_113125533300015054Vadose Zone SoilMDFSGASRKENEPKVVGIGPNKDVVDWFVKAGSFPRNVPKQELLRAGFDKVVK*
Ga0137420_120657213300015054Vadose Zone SoilMDFSGASREENEPKVISIRPDKDVVDWFVVAVSFSRDVPKKELLRARFDDIVK*
Ga0137420_137109833300015054Vadose Zone SoilEIDTVSVFKEEVDFSGASREENEPKVISIRPDKDVVDWFVVAVSFSRNMPKQELLRASFDDIVQ*
Ga0137420_140864423300015054Vadose Zone SoilVSVFKEEVDFSSASRKENEPKVVGIGPNKDVVDWFVEVSSFPRNVPKQELLRASFDNIVQ
Ga0137420_146332643300015054Vadose Zone SoilMDFSGASREEDEPKVISIGPDKDVVDWFIVTGSFPRDVPKQELLRACFDDVV*
Ga0137418_1093108723300015241Vadose Zone SoilMDFSGASREEDEPKVVGIGPNKDMVDRFVKAGSFPRNVPKQELLRASFDKIVK*
Ga0137418_1128987313300015241Vadose Zone SoilMVSIFQEEMYFLGASREKDEPKVVSVGPDKDVVNWFIVNVSFSRDVPKQELLRACWDDVV
Ga0137418_1132628113300015241Vadose Zone SoilMDFSGASRKENEPKVVGIGPNKDVVDWFVEAGSFPRNVPKQELLRAG
Ga0137412_1119784723300015242Vadose Zone SoilMDFSGASREENEPKVVSIGPNKDVVDWFVEAGSFPRNMPKQELL*
Ga0209588_111349423300027671Vadose Zone SoilVDFSGASREEDEPKVVGIGPNKDMVDRFVKASSFPRNVPKQELL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.