Metagenome Family F096620

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096620
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	63 residues
Representative Sequence	MTPKFTQLLEQCITDGVILGHKRAYKHNDAPSESDINQSIVNEVLNEIHEWFDFDEPKEKNT
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	82.24 %
% of genes near scaffold ends (potentially truncated)	20.19 %
% of genes from short scaffolds (< 2000 bps)	71.15 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Duplodnaviria (43.269 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (76.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (75.962 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.56% β-sheet: 0.00% Coil/Unstructured: 54.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03237	Terminase_6N	3.85
PF07486	Hydrolase_2	2.88
PF12705	PDDEXK_1	1.92
PF08291	Peptidase_M15_3	1.92
PF11753	DUF3310	1.92
PF13479	AAA_24	1.92
PF08245	Mur_ligase_M	0.96
PF04466	Terminase_3	0.96
PF00476	DNA_pol_A	0.96
PF05037	DUF669	0.96
PF04586	Peptidase_S78	0.96
PF16786	RecA_dep_nuc	0.96
PF05772	NinB	0.96
PF15943	YdaS_antitoxin	0.96
PF00082	Peptidase_S8	0.96
PF04404	ERF	0.96
PF13884	Peptidase_S74	0.96
PF05766	NinG	0.96
PF01612	DNA_pol_A_exo1	0.96
PF03819	MazG	0.96
PF00271	Helicase_C	0.96
PF00959	Phage_lysozyme	0.96
PF07728	AAA_5	0.96
PF05866	RusA	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	2.88
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.96
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	0.96
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.96
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.96 %
Unclassified	root	N/A	24.04 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	66.35 %
Unclassified	root	N/A	24.04 %
cellular organisms	root	All Organisms → cellular organisms	9.62 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	43.27 %
Unclassified	root	N/A	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.62 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	43.27 %
Unclassified	root	N/A	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.69 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.92 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	43.27 %
Unclassified	root	N/A	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	43.27 %
Unclassified	root	N/A	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.88 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	1.92 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	41.35 %
Unclassified	root	N/A	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.88 %
unclassified Chlorobiota	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota	1.92 %
Sterolibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae	1.92 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.96 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	41.35 %
Unclassified	root	N/A	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	2.88 %
Methyloversatilis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	1.92 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1.92 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.96 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	41.35 %
Unclassified	root	N/A	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
unclassified Acidovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax	2.88 %
Methyloversatilis universalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis	1.92 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1.92 %
Paracoccus sulfuroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus sulfuroxidans	0.96 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	41.35 %
Unclassified	root	N/A	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Acidovorax sp. Leaf73	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Leaf73	2.88 %
Methyloversatilis universalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis	1.92 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1.92 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	0.96 %
Paracoccus sulfuroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus sulfuroxidans	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c006110	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2424	Open in IMG/M
3300000176\|TB03JUN2009E_c008488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1921	Open in IMG/M
3300000176\|TB03JUN2009E_c049156	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	546	Open in IMG/M
3300002091\|JGI24028J26656_1007092	All Organisms → Viruses → Predicted Viral	1554	Open in IMG/M
3300002091\|JGI24028J26656_1007295	All Organisms → Viruses → Predicted Viral	1517	Open in IMG/M
3300002091\|JGI24028J26656_1008164	All Organisms → Viruses → Predicted Viral	1386	Open in IMG/M
3300002092\|JGI24218J26658_1002870	All Organisms → Viruses → Predicted Viral	4201	Open in IMG/M
3300002092\|JGI24218J26658_1011620	All Organisms → Viruses → Predicted Viral	1415	Open in IMG/M
3300002092\|JGI24218J26658_1018555	Not Available	975	Open in IMG/M
3300002202\|metazooDRAFT_1236526	Not Available	527	Open in IMG/M
3300002307\|JGI24890J29729_1042710	Not Available	876	Open in IMG/M
3300003375\|JGI26470J50227_1055296	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	677	Open in IMG/M
3300003787\|Ga0007811_1022094	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	543	Open in IMG/M
3300003797\|Ga0007846_1003333	All Organisms → Viruses → Predicted Viral	2030	Open in IMG/M
3300003798\|Ga0007842_1000137	Not Available	6830	Open in IMG/M
3300003804\|Ga0007817_1000030	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12269	Open in IMG/M
3300004112\|Ga0065166_10068313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1227	Open in IMG/M
3300004684\|Ga0065168_1001500	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3892	Open in IMG/M
3300004684\|Ga0065168_1036487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	774	Open in IMG/M
3300004802\|Ga0007801_10039935	Not Available	1409	Open in IMG/M
3300005584\|Ga0049082_10029741	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1907	Open in IMG/M
3300006071\|Ga0007876_1165142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Leaf73	547	Open in IMG/M
3300006100\|Ga0007806_1000297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16667	Open in IMG/M
3300006105\|Ga0007819_1093817	Not Available	600	Open in IMG/M
3300006119\|Ga0007866_1014696	Not Available	1666	Open in IMG/M
3300006127\|Ga0007805_1003146	Not Available	4951	Open in IMG/M
3300006128\|Ga0007828_1011660	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1867	Open in IMG/M
3300007974\|Ga0105747_1049365	All Organisms → Viruses → Predicted Viral	1237	Open in IMG/M
3300008448\|Ga0114876_1219979	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	621	Open in IMG/M
3300009151\|Ga0114962_10000493	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	34989	Open in IMG/M
3300009151\|Ga0114962_10602785	Not Available	570	Open in IMG/M
3300009154\|Ga0114963_10481882	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	662	Open in IMG/M
3300009502\|Ga0114951_10040312	All Organisms → Viruses → Predicted Viral	2893	Open in IMG/M
3300009687\|Ga0116144_10255903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis	914	Open in IMG/M
3300010885\|Ga0133913_10465063	All Organisms → Viruses → Predicted Viral	3336	Open in IMG/M
3300011268\|Ga0151620_1092462	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	959	Open in IMG/M
3300012665\|Ga0157210_1057439	Not Available	591	Open in IMG/M
3300013005\|Ga0164292_10091862	All Organisms → Viruses → Predicted Viral	2301	Open in IMG/M
3300013005\|Ga0164292_10745041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	622	Open in IMG/M
3300013093\|Ga0164296_1183882	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	814	Open in IMG/M
3300013094\|Ga0164297_10077932	All Organisms → Viruses → Predicted Viral	1468	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10031186	All Organisms → Viruses → Predicted Viral	3684	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10918357	Not Available	534	Open in IMG/M
3300013285\|Ga0136642_1112888	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	693	Open in IMG/M
3300013286\|Ga0136641_1001947	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8443	Open in IMG/M
3300013286\|Ga0136641_1206704	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	518	Open in IMG/M
3300014490\|Ga0182010_10413015	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	737	Open in IMG/M
3300015050\|Ga0181338_1008577	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1702	Open in IMG/M
3300017716\|Ga0181350_1128183	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	605	Open in IMG/M
3300017747\|Ga0181352_1005199	Not Available	4438	Open in IMG/M
3300017754\|Ga0181344_1087010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus sulfuroxidans	914	Open in IMG/M
3300017766\|Ga0181343_1174318	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	594	Open in IMG/M
3300017778\|Ga0181349_1316101	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502	Open in IMG/M
3300017950\|Ga0181607_10000433	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	35989	Open in IMG/M
3300020506\|Ga0208091_1002984	All Organisms → Viruses → Predicted Viral	2463	Open in IMG/M
3300020527\|Ga0208232_1027088	Not Available	794	Open in IMG/M
3300020716\|Ga0214207_1013663	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1036	Open in IMG/M
3300020718\|Ga0214178_1024783	Not Available	779	Open in IMG/M
3300021138\|Ga0214164_1080714	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	641	Open in IMG/M
3300021139\|Ga0214166_1065148	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	763	Open in IMG/M
3300021952\|Ga0213921_1027103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	931	Open in IMG/M
3300021961\|Ga0222714_10209307	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300021963\|Ga0222712_10036589	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3805	Open in IMG/M
3300022602\|Ga0248169_107425	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9723	Open in IMG/M
3300022602\|Ga0248169_129773	All Organisms → Viruses → Predicted Viral	2939	Open in IMG/M
3300022746\|Ga0228701_1006284	Not Available	5308	Open in IMG/M
3300025353\|Ga0208255_105563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Leaf73	1249	Open in IMG/M
3300025353\|Ga0208255_119933	Not Available	595	Open in IMG/M
3300025357\|Ga0208383_1004790	Not Available	1850	Open in IMG/M
3300025372\|Ga0207957_1028144	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	640	Open in IMG/M
3300025379\|Ga0208738_1000097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	26991	Open in IMG/M
3300025383\|Ga0208250_1009026	All Organisms → Viruses → Predicted Viral	1915	Open in IMG/M
3300025401\|Ga0207955_1000920	Not Available	8153	Open in IMG/M
3300025407\|Ga0208378_1036913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp. Leaf73	824	Open in IMG/M
3300025417\|Ga0208616_1002025	Not Available	4088	Open in IMG/M
3300025450\|Ga0208744_1001545	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6615	Open in IMG/M
3300025591\|Ga0208496_1095173	Not Available	645	Open in IMG/M
3300025859\|Ga0209096_1158651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis universalis	881	Open in IMG/M
3300025861\|Ga0209605_1181090	Not Available	798	Open in IMG/M
3300027741\|Ga0209085_1271574	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	656	Open in IMG/M
3300027747\|Ga0209189_1000666	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	27711	Open in IMG/M
3300027749\|Ga0209084_1000417	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	39967	Open in IMG/M
3300027763\|Ga0209088_10038281	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2383	Open in IMG/M
3300027777\|Ga0209829_10205227	Not Available	857	Open in IMG/M
3300027896\|Ga0209777_10381935	All Organisms → Viruses → Predicted Viral	1064	Open in IMG/M
3300027899\|Ga0209668_10184118	All Organisms → Viruses → Predicted Viral	1290	Open in IMG/M
3300027974\|Ga0209299_1070829	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
3300031772\|Ga0315288_11000803	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	744	Open in IMG/M
3300031787\|Ga0315900_10331233	All Organisms → Viruses → Predicted Viral	1241	Open in IMG/M
3300031884\|Ga0316220_1239100	Not Available	613	Open in IMG/M
3300031951\|Ga0315904_10292785	All Organisms → Viruses → Predicted Viral	1531	Open in IMG/M
3300031999\|Ga0315274_10476551	Not Available	1420	Open in IMG/M
3300032118\|Ga0315277_10901846	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	820	Open in IMG/M
3300032256\|Ga0315271_11518188	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300032397\|Ga0315287_10865082	All Organisms → Viruses → Predicted Viral	1060	Open in IMG/M
3300032562\|Ga0316226_1184128	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	883	Open in IMG/M
3300032753\|Ga0316224_1096809	All Organisms → Viruses → Predicted Viral	1119	Open in IMG/M
3300033981\|Ga0334982_0031201	All Organisms → Viruses → Predicted Viral	3040	Open in IMG/M
3300033996\|Ga0334979_0487155	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	669	Open in IMG/M
3300034082\|Ga0335020_0543591	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	548	Open in IMG/M
3300034107\|Ga0335037_0612880	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	574	Open in IMG/M
3300034121\|Ga0335058_0000612	Not Available	27342	Open in IMG/M
3300034121\|Ga0335058_0112124	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1596	Open in IMG/M
3300034121\|Ga0335058_0295451	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	940	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.12%
Engineered	Engineered	2.88%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.15%
Wastewater	Engineered → Wastewater	2.88%
Terrestrial	Environmental → Terrestrial	0.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.31%
Marine	Environmental → Aquatic → Marine	3.85%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	2.88%
Soil	Environmental → Terrestrial → Soil	0.96%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	52.88%
Lake	Environmental → Aquatic → Freshwater → Lake	33.65%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	2.88%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.92%
Creek	Environmental → Aquatic → Freshwater → Creek	1.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	37.50%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	27.88%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	9.62%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.77%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.88%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.88%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.96%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	23.08%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.46%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.62%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	8.65%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	6.73%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	6.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.85%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.88%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	2.88%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	1.92%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.92%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.96%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.96%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.96%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.96%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.96%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.96%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002202	Freshwater microbial communities from San Paulo Zoo lake, Brazil - SEP 2012	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004802	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2M	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020718	Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 epilimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021952	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300022746	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17_Aug_MG	Environmental	Open in IMG/M
3300025353	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025450	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025591	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2M (SPAdes)	Environmental	Open in IMG/M
3300025859	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025861	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG (SPAdes)	Engineered	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0061104	3300000176	Freshwater	MTPKFLQLLEKCILDGVILGHTRAYKHTDSPSESDINQSIVNEVLNELHEWFDFDEQGFKGAKE*
TB03JUN2009E_0084886	3300000176	Freshwater	MTPKFTQLLEKCILDGVILGHKRAYKHNTTPSESDINESIFNEVINELHEWFDFEA
TB03JUN2009E_0491562	3300000176	Freshwater	MTPKFLQLLEKCILDGVILGHKRAYKHTDSPSESDINQSIVNEVFNEIHEWFDFDEQGFKGAKE*
JGI24028J26656_10070923	3300002091	Lentic	MTPKFLQLLETCITDGVILGHKRAYKHNDAPSESDINQSIVNEVLNEIHDWFDFDDAKLKEKNNG*
JGI24028J26656_10072953	3300002091	Lentic	MTPKFTQLLEQCITDGVILGHKRAYKHNDAPSESDINQSIVNEVLNEIHEWFDFDEAKLKDKNNA*
JGI24028J26656_10081642	3300002091	Lentic	MTPKFLQLLETCILDGVILGHKRAYKHNDAPSESDINXSIVNEVLNEIHEWFDFDXAKXKDKNHA*
JGI24218J26658_10028706	3300002092	Lentic	MTPKFLQLLETCIIDGVALGHKRAYKYNDAPSESDINLSIVYEVINEIHEWFDFDEAKLKEKNT*
JGI24218J26658_10116204	3300002092	Lentic	MTPKFLQLLEKCILDGVILGHTRAYKYNDSPNKSDINQLIVNEVLNEIHEWFDFDEQGLKDSKNDQRF*
JGI24218J26658_10185551	3300002092	Lentic	FLQLLETCILDGVILGHKRAYKHNDAPSESDINQSIVNEVLNEIHEWFDFDDAKLKDKNHA*
metazooDRAFT_12365262	3300002202	Lake	MTPKFIQLLEECIMDGIQLGHNRAYKHADSPERDVINEAIFNAVLAEIHEWFDFESEEKNT*
JGI24890J29729_10427101	3300002307	Lentic	FLRLLEQCILDGVLIGHTRAYKYSDTPSKTDINESIVNEVLNELHEWFDFDEQGLKGVKE
JGI26470J50227_10552962	3300003375	Freshwater	MTPKFLQLLETCITDGVMLGHTRAYKHNDAPSKADINQSIVNEVLNEIHEWFDFEETKEKNT*
Ga0007811_10220943	3300003787	Freshwater	VILGHKRAYKHNTIPSESDINESIFNEVINELHEWFDFEVKSNKEAHD*
Ga0007846_10033337	3300003797	Freshwater	MTPKFTLLLEKCVLDGVILGHKRAYKHNTIPSESDINESIFNEVINELHEWFDFEVKSNKEAHD*
Ga0007842_10001379	3300003798	Freshwater	MTPKFLQLLETCITDGVVLGHTRAYKHNDAPSKADINQSIVNEVLNEIHEWFDFEETKEKNT*
Ga0007817_100003027	3300003804	Freshwater	MTPKFLQLLEKCILDGVILGHTRAYKHTDSPSESDINQSIVNEVFNEIHEWFDFDEQGFKGAKE*
Ga0065166_100683134	3300004112	Freshwater Lake	MTPKFIQLLEQCITNGVVLGHTRAYKHNDAPSKADINEAIVQTVLNELHEWFDFDENKEQA*
Ga0065168_10015007	3300004684	Freshwater	LLEKCVLDGVILGHKRAYKHNTIPSESDINESIFNEVINELHEWFDFEVKSNKEAHD*
Ga0065168_10364871	3300004684	Freshwater	MTPKFTQLLEKCILDGVILGHKRAYKHNTTPSESDINESIVNEVLNELHEWFDFEVKSNKEAHD*
Ga0007801_100399353	3300004802	Freshwater	MTPKFTQLLEQCILDGVILGHKRAYKHNDAPSESDINQSIVTEVLNEIYEWFDFDEAKLKEKNGYAEEKNT*
Ga0049082_100297415	3300005584	Freshwater Lentic	MTPKFTQLLEQCILDGVILGHKRAYKYNDAPSESDINQSIVTEVLNEIHEWFDFDEAKPKENT*
Ga0007876_11651423	3300006071	Freshwater	QLLEKCIRDGVILGHKKIYKYNSAPNESEINQSIVNEVFNEIYEWFYFDEFKLKDKKHE*
Ga0007806_10002971	3300006100	Freshwater	KGEEHMTPKFTLLLEKCVLDGVILGHKRAYKHNTIPSESDINESIFNEVINELHEWFDFEVKSNKEAHD*
Ga0007819_10938173	3300006105	Freshwater	RMTPKFLQLLEKCILDGVILGHTRAYKHTDSPSESDINQSIVNEVFNEIHEWFDFDEQGFKGAKENRII
Ga0007866_10146966	3300006119	Freshwater	MTPKFRQLLEKCILDGVIQGHKKIYKYNSAPNESEINRSIVNEVLDEIHEWFDFDEAKPKEKNT*
Ga0007805_10031462	3300006127	Freshwater	MTPKFTQLLEKCIRDGVILGHKKIYKYNSAPNESEINQSIVNEVFNEIYEWFYFDEFKLKDKKHE*
Ga0007828_10116608	3300006128	Freshwater	MTPKFLQLLETCITDGVVLGHTRAYKHNDDPSKADINQSIVNEVLNEIHEWFDFEET
Ga0105747_10493654	3300007974	Estuary Water	MTPKFTQLLEQCILDGVILGHKRAYKHNDAPSESDINQSIVTEVLNEIHEWFDFDEPKGEA*
Ga0114876_12199792	3300008448	Freshwater Lake	MTPKFTQLLEQCITDGVILGHKRAYKYNDSPSESDINQSIVTEVLNEIHEWFDFDEAKPKEEA*
Ga0114962_1000049357	3300009151	Freshwater Lake	MTPKFLQLLEKCILDGVILGHQRAYKYNDSPNESDINQSIVNEVFNEIHEWFDFDEQGFKGVKE*
Ga0114962_106027852	3300009151	Freshwater Lake	MTPKFTQLLEQCITDGVILGHKRAYKHNDAPSESDINQSIVNEVLNEIHEWFDFDEPKENT*
Ga0114963_104818823	3300009154	Freshwater Lake	MMTPKFMQLLEQCIADGVVIGHNRAYKHTDKPSETQINESIVNEVLFQIHEWFDFDDAREKNND*
Ga0114951_100403122	3300009502	Freshwater	MTPKFLRLLEQCILDGVLIGHTRAYKYSDTPSKTDINESIVNEVLNELHEWFDFDEQGLKGVKE*
Ga0116144_102559033	3300009687	Anaerobic Digestor Sludge	MTPKFMRLLEECITNGVVLGHTRAYKHNDAPSKADINESIVREVLNEIHEWFDFDELNQGETK*
Ga0133913_104650633	3300010885	Freshwater Lake	MMTPKFIQLLERCIEDGVFIGHNRAYKHTDNPSKTQINESIVNEVLFQIHEWFDFDDAKEKDV*
Ga0151620_10924624	3300011268	Freshwater	MTPKFTQLLEQCILDGVILGHKRAYKHNDAPSESDINQSIVTEVLNEIHEWFDFDEPKGES*
Ga0157210_10574392	3300012665	Freshwater	MTPKFTQLLEQCILDGVILGHKRAYKHNAAPSDSEINQSIVNEVINEINEWFDFDEAKIKGMDT*
Ga0164292_100918629	3300013005	Freshwater	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAKLKERNHD*
Ga0164292_107450412	3300013005	Freshwater	LLEKCITDGVILGHTRAYKHNDVPSKADINESIVREVLNELHEWFDFDETKEKS*
Ga0164296_11838822	3300013093	Freshwater	MTPKFTQLLEKCILDGVILGHKRAYKHNTTPSESDINESIFNEVINELHEWFDFEAKSNKEAHD*
Ga0164297_100779323	3300013094	Freshwater	MTPKFTLLLEKCVLDGVILGHKRAYKHNTTPSESDINESIFNEVLNELHEWFDFEAKSNKEAHD*
(restricted) Ga0172365_100311867	3300013127	Sediment	MTPKFIQLLEECIMDGIQLGHNRAYKHTDSPKRHVINEAIFNAVLAEIHEWFDFNEGKEQT*
(restricted) Ga0172372_109183572	3300013132	Freshwater	MTPKFIQLLEMCIMDGIELGHNRAYKHNDAPERHVINEAIFNAVLAEIHEWFDFNEGKEQT*
Ga0136642_11128882	3300013285	Freshwater	MSIEAMRQGEHMTPKFLQLLETCILDGVILGHTRAYKYSDDPSTADINQSIVNEVLNEIHEWFDFEETKEKV*
Ga0136641_100194715	3300013286	Freshwater	MTPKFTQLLEQCITAGVILGHKRAYKHNDAPSESDINQSIVNEVLNEIHEWFDFDESKEKNNG*
Ga0136641_12067042	3300013286	Freshwater	VRVRFLQGEKHMTPKFLQLLETCILDGVILGHTRAYKHNDAPSTADINESIVNEVLNEIHEWFDFEETKEKNNG*
Ga0182010_104130152	3300014490	Fen	MTPKFLQLLETCITDGVVLGHKRAYKYNDAPSESDINQSIVNEVLNEIHEWFDFDEAKPKEKNNG*
Ga0181338_10085776	3300015050	Freshwater Lake	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAKLKEKNHD*
Ga0181350_11281832	3300017716	Freshwater Lake	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLPEIYEWFDFDDAKLKEKNHD
Ga0181352_100519910	3300017747	Freshwater Lake	MTPKFTQLLEKCILDGVVLGHIRAYKHDSSPSQADINQSIVNEVLNEIHEWFDFDEAKLREKNL
Ga0181344_10870102	3300017754	Freshwater Lake	MTPKFIQLLEKCVTDGVVLGHTRAYKHNDAPSRSDINEAIVREVLNELHERFDFEETKE
Ga0181343_11743182	3300017766	Freshwater Lake	MTPKFIQLLEQCITNGVVLGHTRAYKHNDAPSKADINEAIVQTVLNELHEWFDFDENKEQ
Ga0181349_13161012	3300017778	Freshwater Lake	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAKLKEKNHD
Ga0181607_1000043335	3300017950	Salt Marsh	MTPKFTQLLEKCILDGVVLGHKRAYKHNNAPSESDINQSIVNEVLTEIYEWFDFDDAKLKEKNHDL
Ga0208091_10029845	3300020506	Freshwater	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAKLKERNT
Ga0208232_10270881	3300020527	Freshwater	TKGAQHMTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAKHLHNALKEKFGR
Ga0214207_10136632	3300020716	Freshwater	MTPKFLQLLEKCILDGVILGHTRAYKHTDSPSESDINQSIVNEVLNELHEWFDFDEQGFKGAKE
Ga0214178_10247833	3300020718	Freshwater	TPKFLQLLEKCILDGVILGHTRAYKHTDSPSESDINQSIVNEVLNELHEWFDFDEQGFKGAKE
Ga0214164_10807143	3300021138	Freshwater	MTPKFLQLLEKCILDGVILGHKRAYKHTDSPSESDINQSIVNEVFNEIHEWFDFDEQGFKGAKE
Ga0214166_10651483	3300021139	Freshwater	MTPKFLQLLEKCILDGVILGHTRAYKHTDSPSESDINQSIVNEVFNEIHEWFDFDEQGFKGAKE
Ga0213921_10271033	3300021952	Freshwater	MSKQMTPKFLQLLETCILDGVILGHTRAYKHNDAPSKSDINESIVNEVLNEIHEWFDFEETKEKNT
Ga0222714_102093072	3300021961	Estuarine Water	MTPKFLQLLETCILDGVILGHTRAYKHNDDPSTADINQSIVNEVLNEIHEWFDFEETKEKTHD
Ga0222712_100365895	3300021963	Estuarine Water	MTPKFTQLLEQCITDGVILGHKRAYKHNDAPSESDINQSIVNEVLNEIHEWFDFDEPKEKNT
Ga0248169_10742517	3300022602	Freshwater	MTPKFAQLLEKCIRDGVILGHKKIYKYNSAPNESEINQSIVNEVFNEIHEWFYFDEFKLKDKKHD
Ga0248169_12977310	3300022602	Freshwater	MTPKFTLLLEKCVLDGVILGHKRAYKHNTTPSESDINESIFNEVLNELHEWFDFEAKSNKEAHD
Ga0228701_100628412	3300022746	Freshwater	MTPKFIRLLEECITDGVVLGHTRAYKHNDAPSRADINESIVREVLNEIHEWFDFDEPNQGETHD
Ga0208255_1055634	3300025353	Freshwater	MTPKFAQLLEKCIRDGVILGHKKIYKYNSAPNESEINQSIVNEVFNEIYEWFYFDEFKLKDKKHE
Ga0208255_1199332	3300025353	Freshwater	MTPKFLQLLETCITDGVVLGHTRAYKHNDAPSKADINQSIVNEVLNEIHEWFDFEETKEKNT
Ga0208383_10047901	3300025357	Freshwater	EEHMTPKFAQLLEKCIRDGVILGHKKIYKYNSAPNESEINQSIVNEVFNEIYEWFYFDEFKLKDKKHE
Ga0207957_10281441	3300025372	Freshwater	MTPKFTQLLEKCVLDGVILGHKRAYKHNTTPSESDINESIFNEVINELHEWFDFEAKSNKEAHD
Ga0208738_10000975	3300025379	Freshwater	MTPKFTLLLEKCVLDGVILGHKRAYKHNTIPSESDINESIFNEVINELHEWFDFEVKSNKEAHD
Ga0208250_10090263	3300025383	Freshwater	MTPKFRQLLEKCILDGVIQGHKKIYKYNSAPNESEINRSIVNEVLDEIHEWFDFDEAKLKEKNT
Ga0207955_100092010	3300025401	Freshwater	MTPKFTQLLEKCILDGVILGHKRAYKHNTTPSESDINESIVNEVLNELHEWFDFEVKSNKEAHD
Ga0208378_10369134	3300025407	Freshwater	AQLLEKCIRDGVILGHKKIYKYNSAPNESEINQSIVNEVFNEIYEWFYFDEFKLKDKKHE
Ga0208616_100202510	3300025417	Freshwater	EKCIRDGVILGHKKIYKYNSAPNESEINQSIVNEVFNEIYEWFYFDEFKLKDKKHE
Ga0208744_100154513	3300025450	Freshwater	MTPKFRQLLEKCILDGVIQGHKKIYKYNSAPNESEINRSIVNEVLDEIHEWFDFDEAKLKQKNGYAEEKNT
Ga0208496_10951732	3300025591	Freshwater	MTPKFTQLLEQCILDGVILGHKRAYKHNDAPSESDINQSIVTEVLNEIYEWFDFDEAKLKEKNGYAEEKNT
Ga0209096_11586512	3300025859	Anaerobic Digestor Sludge	MTPKFMRLLEECITNGVVLGHTRAYKHNDAPSKADINESIVREVLNEIHEWFDFDELNQGETK
Ga0209605_11810901	3300025861	Anaerobic Digestor Sludge	MRLLEECITNGVVLGHTRAYKHNDAPSKADINESIVREVLNEIHEWFDFDELNQGETK
Ga0209085_12715741	3300027741	Freshwater Lake	MMTPKFMQLLEQCIADGVVIGHNRAYKHTDKPSETQINESIVNEVLFQIHEWFDFDDAREKNND
Ga0209189_100066614	3300027747	Freshwater Lake	MTPKFMQLLEQCIADGVVIGHNRAYKHTDNPSKTQINELIVNEVFIQIHEWFDFSETKGKDA
Ga0209084_100041757	3300027749	Freshwater Lake	MTPKFLQLLEKCILDGVILGHQRAYKYNDSPNESDINQSIVNEVFNEIHEWFDFDEQGFKGVKE
Ga0209088_100382812	3300027763	Freshwater Lake	MTPKFTQLLEQCITDGVILGHKRAYKYNDSPSESDINQSIVTEVLNEIHEWFDFDEAKPKEEA
Ga0209829_102052271	3300027777	Freshwater Lake	MTPKFLQLLEKCILDGVILGHQRAYKYNDSPNESDINQSIVNEVFNEIHEWFDFDEQGFK
Ga0209777_103819352	3300027896	Freshwater Lake Sediment	MTPKFMQLLEQCVLDGVILGHKRAYKHNDAPSESDINMSIVQEVMNEIHEWFDCDEQSGVAE
Ga0209668_101841182	3300027899	Freshwater Lake Sediment	MTPKFTQLLEKCILDGVVLGHKRAYKHDGAPNELDINESIFNEVLNEIHEWFDFDDAKLKERNT
Ga0209299_10708294	3300027974	Freshwater Lake	QTFIQRMGNQSMTPKFTQLLEQCITDGVILGHKRAYKYNDSPSESDINQSIVTEVLNEIHEWFDFDEAKPKEEA
Ga0315288_110008032	3300031772	Sediment	MTPKFTQLLEQCITDGVILGHKRAYKYNDAPSESDINQSIVTEVLNEIHEWFDFDEAKPKENT
Ga0315900_103312334	3300031787	Freshwater	MTPKFTQLLEKCILDGVVLGHKRAYKHDSSPSQADINQSIVNEVLNEIHEWFDFDEAKLKEKNT
Ga0316220_12391001	3300031884	Freshwater	MTPKFMQLLEQCVLDGVILGHKRAYKHNDAPSESDINMSIVQEVMNEIHEWFDCDERTGLTVPPRK
Ga0315904_102927855	3300031951	Freshwater	MTPKFTQLLEKCILDGVVLGHIRAYKHDSSPSQADINQSIVNEVLNEIHEWFDFDEAKLKEKNT
Ga0315274_104765516	3300031999	Sediment	QLLEQCITDGVILGHKRAYKYNDSPSESDINQSIVTEVLNEIHEWFDFDEAKPKENT
Ga0315277_109018462	3300032118	Sediment	MTPKFTQLLEQCITDGVILGHKRAYKYNDSPSESDINQSIVTEVLNEIHEWFDFDEVKPKEEA
Ga0315271_115181883	3300032256	Sediment	MTPKFTQLLEQCITDGVILGHKRAYKYNDSPSESDINQSIVTEVLNEIHEWFDFDEAKLKEE
Ga0315287_108650822	3300032397	Sediment	MTPKFTQLLEQCITDGVILGHKRAYKYNDSPSESDINQSIVTEVLNEIHEWFDFDEAKPKENT
Ga0316226_11841284	3300032562	Freshwater	MTPKFTLLLEKCILDGVILGHKRAYKHNTTPSESDINESIFNEVLNELHEWFDFEAKSNKEAHD
Ga0316224_10968093	3300032753	Freshwater	MTPKFTQLLEKCILDGVILGHKRAYKHNTTPSESDINESIFNEVLNELHEWFDFEAKSNKEAHD
Ga0334982_0031201_1093_1287	3300033981	Freshwater	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAKLKEKNT
Ga0334979_0487155_33_230	3300033996	Freshwater	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAKLKERNHD
Ga0335020_0543591_44_244	3300034082	Freshwater	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAKLKEKNHDL
Ga0335037_0612880_128_313	3300034107	Freshwater	MTPKFIQLLEKCITDGVIFGHTRAYKHNDFPSKADINESIVREVLNEVHEWFDFDEKEEQ
Ga0335058_0000612_13643_13828	3300034121	Freshwater	MTPKFILLLEKCITDGVILGHTRAYKHNDFPSKADINESIVREVLNELHEWFYFDGKEEQ
Ga0335058_0112124_993_1193	3300034121	Freshwater	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSVVNEVLTEIYEWFDFDDAKLKEKNHDL
Ga0335058_0295451_3_176	3300034121	Freshwater	MTPKFTQLLEKCILDGVVLGHKRAYKHDSAPSESDINQSIVNEVLTEIYEWFDFDDAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters