Metagenome Family F096617

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096617
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	MANQRDIDRRNDVRFLTPLLLMALVLVIGILVYAYTGHAAAAIG
Number of Associated Samples	69
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.04 %
% of genes near scaffold ends (potentially truncated)	22.12 %
% of genes from short scaffolds (< 2000 bps)	76.92 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (19.231 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.923 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF08883	DOPA_dioxygen	18.27
PF09954	DUF2188	12.50
PF06718	DUF1203	5.77
PF02582	DUF155	3.85
PF01613	Flavin_Reduct	3.85
PF06779	MFS_4	3.85
PF13458	Peripla_BP_6	2.88
PF06736	TMEM175	2.88
PF02653	BPD_transp_2	1.92
PF03450	CO_deh_flav_C	0.96
PF04116	FA_hydroxylase	0.96
PF00939	Na_sulph_symp	0.96
PF09821	AAA_assoc_C	0.96
PF00067	p450	0.96
PF00725	3HCDH	0.96
PF02668	TauD	0.96
PF03992	ABM	0.96
PF08327	AHSA1	0.96
PF07758	DUF1614	0.96
PF08546	ApbA_C	0.96
PF00731	AIRC	0.96
PF13561	adh_short_C2	0.96
PF07729	FCD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3805	Aromatic ring-cleaving dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	18.27
COG1723	Mitochondrial translation protein, Rmd1/RMND1/DUF155 family	Translation, ribosomal structure and biogenesis [J]	3.85
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	3.85
COG3548	Uncharacterized membrane protein	Function unknown [S]	2.88
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.96
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.96
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.96
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.96
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.96
COG2124	Cytochrome P450	Defense mechanisms [V]	0.96
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.96
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.96
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.96
COG4089	Uncharacterized membrane protein	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.42 %
Unclassified	root	N/A	25.00 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.58 %
Unclassified	root	N/A	25.00 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34.62 %
Unclassified	root	N/A	25.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.77 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.88 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.96 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.96 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.96 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Paracraurococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus	1.92 %
Rhodovastum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum	0.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.96 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.96 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Paracraurococcus ruber	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → Paracraurococcus ruber	1.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Microvirga antarctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga antarctica	0.96 %
Rhodovastum atsumiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	0.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.96 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01CCKBO	Not Available	704	Open in IMG/M
3300005093\|Ga0062594_100114355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga antarctica	1658	Open in IMG/M
3300005533\|Ga0070734_10233310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1057	Open in IMG/M
3300005534\|Ga0070735_10117477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1665	Open in IMG/M
3300005541\|Ga0070733_10389710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	926	Open in IMG/M
3300005542\|Ga0070732_10800634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → Paracraurococcus ruber	575	Open in IMG/M
3300005764\|Ga0066903_103962412	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005764\|Ga0066903_107418653	Not Available	566	Open in IMG/M
3300007982\|Ga0102924_1004826	All Organisms → cellular organisms → Bacteria	13345	Open in IMG/M
3300009518\|Ga0116128_1018312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2401	Open in IMG/M
3300009519\|Ga0116108_1019667	All Organisms → cellular organisms → Bacteria → Proteobacteria	2330	Open in IMG/M
3300009523\|Ga0116221_1450441	Not Available	562	Open in IMG/M
3300009621\|Ga0116116_1158334	Not Available	592	Open in IMG/M
3300009698\|Ga0116216_10695308	Not Available	611	Open in IMG/M
3300009824\|Ga0116219_10513357	Not Available	662	Open in IMG/M
3300009826\|Ga0123355_10684246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1184	Open in IMG/M
3300009826\|Ga0123355_11621537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300010049\|Ga0123356_10649540	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300010049\|Ga0123356_11380127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300010343\|Ga0074044_10179353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1411	Open in IMG/M
3300010376\|Ga0126381_101502518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300010379\|Ga0136449_100501308	Not Available	2108	Open in IMG/M
3300010379\|Ga0136449_101902885	Not Available	884	Open in IMG/M
3300010396\|Ga0134126_12368069	Not Available	578	Open in IMG/M
3300012089\|Ga0153924_1018853	Not Available	1419	Open in IMG/M
3300014156\|Ga0181518_10058861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2267	Open in IMG/M
3300014325\|Ga0163163_10787075	Not Available	1014	Open in IMG/M
3300014495\|Ga0182015_10484555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	791	Open in IMG/M
3300014501\|Ga0182024_10003114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	40085	Open in IMG/M
3300014501\|Ga0182024_10025433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10453	Open in IMG/M
3300014501\|Ga0182024_10443690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1666	Open in IMG/M
3300014501\|Ga0182024_10676184	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300016270\|Ga0182036_11801949	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300017929\|Ga0187849_1123829	Not Available	1069	Open in IMG/M
3300017932\|Ga0187814_10202467	Not Available	746	Open in IMG/M
3300017938\|Ga0187854_10210569	Not Available	856	Open in IMG/M
3300017941\|Ga0187850_10102758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1383	Open in IMG/M
3300017943\|Ga0187819_10074655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2020	Open in IMG/M
3300017943\|Ga0187819_10251921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1033	Open in IMG/M
3300017955\|Ga0187817_10314525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	999	Open in IMG/M
3300017955\|Ga0187817_10341585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	955	Open in IMG/M
3300017955\|Ga0187817_10575728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	718	Open in IMG/M
3300017955\|Ga0187817_10969654	Not Available	544	Open in IMG/M
3300017961\|Ga0187778_10481427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	822	Open in IMG/M
3300017972\|Ga0187781_10001349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18542	Open in IMG/M
3300017972\|Ga0187781_10958730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300017972\|Ga0187781_11230087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300017973\|Ga0187780_10494970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	873	Open in IMG/M
3300017995\|Ga0187816_10215199	Not Available	836	Open in IMG/M
3300018009\|Ga0187884_10007391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7176	Open in IMG/M
3300018019\|Ga0187874_10033648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2510	Open in IMG/M
3300018062\|Ga0187784_10168964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1787	Open in IMG/M
3300018062\|Ga0187784_10836846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	734	Open in IMG/M
3300018062\|Ga0187784_11634122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	510	Open in IMG/M
3300018085\|Ga0187772_10946769	Not Available	627	Open in IMG/M
3300018085\|Ga0187772_11365108	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300018085\|Ga0187772_11435939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300018086\|Ga0187769_10151544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1698	Open in IMG/M
3300018086\|Ga0187769_10501966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	915	Open in IMG/M
3300018086\|Ga0187769_10880549	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300018088\|Ga0187771_10204048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1641	Open in IMG/M
3300018090\|Ga0187770_10836880	Not Available	737	Open in IMG/M
3300021402\|Ga0210385_10215442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1401	Open in IMG/M
3300021420\|Ga0210394_10000723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	63362	Open in IMG/M
3300021420\|Ga0210394_10193292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1774	Open in IMG/M
3300022557\|Ga0212123_10010198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13362	Open in IMG/M
3300025439\|Ga0208323_1066974	Not Available	618	Open in IMG/M
3300025498\|Ga0208819_1047080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1013	Open in IMG/M
3300025914\|Ga0207671_10599426	Not Available	878	Open in IMG/M
3300025931\|Ga0207644_10006735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7486	Open in IMG/M
3300027568\|Ga0208042_1072812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	873	Open in IMG/M
3300027826\|Ga0209060_10294247	Not Available	741	Open in IMG/M
3300027854\|Ga0209517_10163491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1411	Open in IMG/M
3300027895\|Ga0209624_10934442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Paracraurococcus → Paracraurococcus ruber	565	Open in IMG/M
3300030659\|Ga0316363_10220332	Not Available	783	Open in IMG/M
3300031708\|Ga0310686_100539630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3221	Open in IMG/M
3300031708\|Ga0310686_111904490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1345	Open in IMG/M
3300031823\|Ga0307478_10035662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3617	Open in IMG/M
3300031890\|Ga0306925_10392145	Not Available	1489	Open in IMG/M
3300031910\|Ga0306923_10817268	Not Available	1028	Open in IMG/M
3300031954\|Ga0306926_12979925	Not Available	506	Open in IMG/M
3300032076\|Ga0306924_10622237	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300032160\|Ga0311301_10361837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2257	Open in IMG/M
3300032160\|Ga0311301_10836056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1256	Open in IMG/M
3300032770\|Ga0335085_10014308	All Organisms → cellular organisms → Bacteria	11588	Open in IMG/M
3300032783\|Ga0335079_10695471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1063	Open in IMG/M
3300032783\|Ga0335079_11397717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	695	Open in IMG/M
3300032805\|Ga0335078_10047492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6359	Open in IMG/M
3300032805\|Ga0335078_10073189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5002	Open in IMG/M
3300032805\|Ga0335078_10391295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1829	Open in IMG/M
3300032805\|Ga0335078_10659733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1306	Open in IMG/M
3300032805\|Ga0335078_10784897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300032805\|Ga0335078_11132967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300032805\|Ga0335078_12089472	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	602	Open in IMG/M
3300032892\|Ga0335081_10478067	All Organisms → cellular organisms → Bacteria → Proteobacteria	1575	Open in IMG/M
3300032895\|Ga0335074_10120020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3408	Open in IMG/M
3300032895\|Ga0335074_10149773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2954	Open in IMG/M
3300032895\|Ga0335074_10429742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1413	Open in IMG/M
3300032896\|Ga0335075_10257972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2000	Open in IMG/M
3300032896\|Ga0335075_10357729	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300032896\|Ga0335075_10503661	Not Available	1237	Open in IMG/M
3300032896\|Ga0335075_10537661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1180	Open in IMG/M
3300033158\|Ga0335077_10021750	All Organisms → cellular organisms → Bacteria → Proteobacteria	8029	Open in IMG/M
3300033158\|Ga0335077_11559339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	630	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.35%
Host-Associated	Host-Associated	7.69%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.15%
Aquatic	Environmental → Aquatic	20.19%
Arthropoda	Host-Associated → Arthropoda	3.85%
Plants	Host-Associated → Plants	2.88%
Fungi	Host-Associated → Fungi	0.96%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.15%
Freshwater	Environmental → Aquatic → Freshwater	18.27%
Digestive System	Host-Associated → Arthropoda → Digestive System	3.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Roots	Host-Associated → Plants → Roots	0.96%
Mycelium	Host-Associated → Fungi → Mycelium	0.96%
Grass	Engineered → Solid Waste → Grass	0.96%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	40.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.27%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	3.85%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	35.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.81%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	19.23%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	15.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.85%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.96%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_02695570	2170459021	Switchgrass, Maize And Mischanthus Litter	MANQRDIDRQNDTRFLTPLLPMATVLAVGILVYAFTGHAMPAAGSQTKGLI
Ga0062594_1001143553	3300005093	Soil	MTSQQDRRYDMRLLMPLLLMATLLAFGILAFAVTGHALAAGG*
Ga0070734_102333101	3300005533	Surface Soil	MPSRRDSDRRNDARFLTPLLLMALLMLCGILVYVYTGHPLA*
Ga0070735_101174772	3300005534	Surface Soil	HQRRASMPNQRDRDRANDTHFLTPLLLIAVIVACGILLYAYTGHALAAAG*
Ga0070733_103897102	3300005541	Surface Soil	MPNQRDRDRVNDAHFLTPLLLIAVIVACGILLYAYTGHALATAG*
Ga0070732_108006342	3300005542	Surface Soil	MANQRDRDRVNDAHFLTPLLLIAVIVACGILLYAYTGHALATAG*
Ga0066903_1039624122	3300005764	Tropical Forest Soil	MADQRDLDRRNDMRLLTPLLLMATILAFGILAYALTGHALAAGG*
Ga0066903_1074186532	3300005764	Tropical Forest Soil	MTSQQDRRNDMRLLTPLLLMATLLAFGILAFALTGH
Ga0102924_100482620	3300007982	Iron-Sulfur Acid Spring	MPGAMLNRRDLDRKNDIRLLTPLLLMAAILAAGILIYAYTGHSLAAAG*
Ga0116128_10183121	3300009518	Peatland	MPNQRDIDRRNDVRFLTLLLLMALVLVIGILVYAYTGHAAAAIG*
Ga0116108_10196672	3300009519	Peatland	MANQRDIDRRNDVRFLTPLLLMTLVLVIGILVYSYTVHAAAAIG*
Ga0116221_14504411	3300009523	Peatlands Soil	MPNQRDIDRRNDIRFLTPLLLMALVLVIGTLVYAYTGHAAAAIG*
Ga0116116_11583341	3300009621	Peatland	IDRRNDVRFLTPLLLMTLVLVIGILVYSYTVHAAAAIG*
Ga0116216_106953083	3300009698	Peatlands Soil	RNDVRFLTPLLLMALVLVVGILVYSYTGHAAAAIG*
Ga0116219_105133572	3300009824	Peatlands Soil	MANQRDIERRNDIRFLTPRLLIALVLVIGILLYAYTGHAAAAIG*
Ga0123355_106842463	3300009826	Termite Gut	LIAMQMEKQSDLDRRNDRALLTPLLLMALVLVLGILVYAYTGHALAAAI*
Ga0123355_116215372	3300009826	Termite Gut	VIAMQMEKQSDLDRRNDRALLTPLLLMALVLVLGILLYVYTGHASAAPT*
Ga0123356_106495402	3300010049	Termite Gut	VIAMQMEKQSDLDRKNDRALLTPLLLMALVLVLGILFYVYTGHASAAAT*
Ga0123356_113801272	3300010049	Termite Gut	LIAMQMEKQSDLDRRNDRALITPLLLMALVVVLGMLFYAYTGHALAAAI*
Ga0074044_101793532	3300010343	Bog Forest Soil	MANQRDIDRRNDVRFLTPLLLMALVLVIGILVYGYAGHAAVAIG*
Ga0126381_1015025183	3300010376	Tropical Forest Soil	METQSDLDRRNDIRLLTPLLLMALILVGGILLYTYTGHAAAI*
Ga0136449_1005013082	3300010379	Peatlands Soil	MANQRDIERRNVIRFLTPLLLMALVLVIGILLNAYTGHAAAAIG*
Ga0136449_1019028852	3300010379	Peatlands Soil	MANQRDIDRRNDVRFLTPLLLMALVLVIGILVYSYTGHAAAAIG*
Ga0134126_123680691	3300010396	Terrestrial Soil	NNDLKFLTPLLLMALILVCGILLYAYTGHSLAASL*
Ga0153924_10188532	3300012089	Attine Ant Fungus Gardens	MADQRNLDRRNDIRLLTPLLLMATILAFGILAYALTGHALAAGG*
Ga0181518_100588614	3300014156	Bog	MANQRDIDHRNDVRFLTPLLLMALVLVIGILVYAYTGHAAAAIG*
Ga0163163_107870752	3300014325	Switchgrass Rhizosphere	MANQRDIDRQNDTRFLTPLLPMATVLAVGILVYAFTGHAMPAAGSQTKG*
Ga0182015_104845552	3300014495	Palsa	MQNQHDLDRTNDARFLTPLLLMAVILVCGILVYAYTGHALAAAG*
Ga0182024_1000311419	3300014501	Permafrost	MPDQHHDRNQHDRNNDGRFLTPLLLMALIVAVGFLIYAYAGHALAG*
Ga0182024_1002543310	3300014501	Permafrost	MPDQGDLDRRNDAHLLTPLLLMGLIIAAGILLYAYAGNAMAAAG*
Ga0182024_104436903	3300014501	Permafrost	DRDRANDVRFLTPLLLMAVIVIAGILLYSYAGHALAV*
Ga0182024_106761842	3300014501	Permafrost	MQNQQDLDRTNDARFLTPLLLMAVILVGGILVYAYTGHALAAAG*
Ga0182036_118019492	3300016270	Soil	MADQRDLDRQNNMRLLTPLLLMATILAFGILAYALTGHALAAGG
Ga0187849_11238294	3300017929	Peatland	MANQRDIDRRNDVRFLTPLLLMTLVLVIGILVYSYTVHAAAAIG
Ga0187814_102024671	3300017932	Freshwater Sediment	MANQRDDVRFLTPLLLMALVLVIGILVYAYSGHATAESG
Ga0187854_102105692	3300017938	Peatland	VPNQRDIDRRNEVRFLTPLLLMALVLVIGILVYAYTGHAAAAIG
Ga0187850_101027582	3300017941	Peatland	MANQRDIDRRNDVRFLTPLLLMTLVLVIGILFYSYTVHAAAAIG
Ga0187819_100746555	3300017943	Freshwater Sediment	IMANQRDIDRRNDVRFLTPLLLMALVLVIGILVYAYTGHATAASG
Ga0187819_102519212	3300017943	Freshwater Sediment	MANQRDIDRRNDVRFLTPLLLMALVLVIGILVYSYTGHAAAAIG
Ga0187817_103145251	3300017955	Freshwater Sediment	MANQRDIDRRNDVRFLTPLLLMALVLAIGILVYSYTGHAAAAIG
Ga0187817_103415853	3300017955	Freshwater Sediment	AKPQKARTMASQRDIDRRNDVRFLTPLLLMALVLVIGILVYAYSGHATAESG
Ga0187817_105757281	3300017955	Freshwater Sediment	MPNQRDIDRRNDVRFLTLLLLMALVLVIGILVYAYT
Ga0187817_109696542	3300017955	Freshwater Sediment	MANQRGIDRRNDVRFLTPLLLMALVLVIGILVYSYTGHAAAAIG
Ga0187778_104814272	3300017961	Tropical Peatland	MAEKGEIDRRNDVKFLTPLLLMALLLAGGILLYAYTGHALAAAG
Ga0187781_100013497	3300017972	Tropical Peatland	VIVPNQPELDRNNDIKFLTPLLLMALILVCGMLLFAYSGHSLSQ
Ga0187781_109587302	3300017972	Tropical Peatland	MANQRDLDRRNDMRFLTPLLLMAVILVIGILVYAYSGHALAAAGR
Ga0187781_112300871	3300017972	Tropical Peatland	MSNQRDRDRANDARLLTPLLLMAAILAAGILLYAYTGHSLAAAG
Ga0187780_104949701	3300017973	Tropical Peatland	KRMAEKGEIDRRNDVKFLTPLLLMAPLLAGGILLYAYTGHALAAAG
Ga0187816_102151992	3300017995	Freshwater Sediment	MANQRDIDRRNDVRFLTPLLLMALVLVIGILVYAYTGHAAAAIG
Ga0187884_100073916	3300018009	Peatland	MPNQRDIDRRNDVRFLTLLLLMALVLVIGILVYAYTGHAAAAIG
Ga0187874_100336488	3300018019	Peatland	MPNQRDIDRRNDVRFLTLLLLMALVLVIGILVYAYTGH
Ga0187784_101689644	3300018062	Tropical Peatland	MSNQRDRDRANDARLLTPLLLMAVILAAGIFLYAYTGHSLAAAG
Ga0187784_108368462	3300018062	Tropical Peatland	MANQRDLDRRNDMRFLTPLLLMALILVIGILVYAYAGQGLAAPAS
Ga0187784_116341221	3300018062	Tropical Peatland	MASQHDLDRRNDMRFLTSLLLMAVILVIGILVYAYSGHALAAAGR
Ga0187772_109467692	3300018085	Tropical Peatland	MPNQHERNRSNDVKFLTQLLLMALILACGILLYAYTGHSLA
Ga0187772_113651082	3300018085	Tropical Peatland	MAEKGEIDRRNDVKFLTPLLLMALLLACGILLYVYTGHALAAAG
Ga0187772_114359392	3300018085	Tropical Peatland	MASQHDLDRRNDMRFLTPLLLMALILVIGILVYAYAGQGLAAPAS
Ga0187769_101515443	3300018086	Tropical Peatland	MPNQRDIDRWNDVRFLTPLLLMALVLVIGILVYAYTGHAAAAIG
Ga0187769_105019662	3300018086	Tropical Peatland	VQNPKVPAMANRRDLDRRNDARFLTPLLLMALILVIGILVYAYAGQGLAAPVR
Ga0187769_108805492	3300018086	Tropical Peatland	MASQHDLDRRNDMRFLTPLLLMAVILVIGILVYAYSGHALAAAGR
Ga0187771_102040483	3300018088	Tropical Peatland	MTNQSDLDRHNDMRFLTPLLLMALILVIGILVYAYAGQGLAAPVR
Ga0187770_108368803	3300018090	Tropical Peatland	VQNPKVPAMANRRDLDRRNDARFLTPLLLMELILVIGILVYAYSGQSLAAIG
Ga0210385_102154421	3300021402	Soil	MPNQRDRDRVNDAHFLTPLLLIAVIVACGILLYAYTGHALATAG
Ga0210394_1000072324	3300021420	Soil	MANQRDRDRVNDAHFLTPLLLIAVIVACGILLYAYTGHALATAG
Ga0210394_101932925	3300021420	Soil	MPNQRDRDRVNDANFLTPLLLIAVIVACGILLYAYTGHALATAG
Ga0212123_1001019820	3300022557	Iron-Sulfur Acid Spring	MPGAMLNRRDLDRKNDIRLLTPLLLMAAILAAGILIYAYTGHSLAAAG
Ga0208323_10669742	3300025439	Peatland	MPNQRDIDRRNDVRFLTPLLLMTLVLVIGILVYSYTVHAAAAIG
Ga0208819_10470801	3300025498	Peatland	MANQRDIDRRNDVRFLTPLLLMALVLVIGILFYSYTGHAAAAIG
Ga0207671_105994261	3300025914	Corn Rhizosphere	MTSQQDRRYDMCLLMPLLLMATLLAFGILAFAVTGHALAAGG
Ga0207644_100067351	3300025931	Switchgrass Rhizosphere	MTSQQDRRYDMRLLMPLLLMATLLAFGILAFAVTGHAL
Ga0208042_10728123	3300027568	Peatlands Soil	DRRNDVRFLTPLLLMALVLVIGILFYSYTGHAAAAIG
Ga0209060_102942471	3300027826	Surface Soil	MPSRRDSDRRNDARFLTPLLLMALLMLCGILVYVYTGHPLA
Ga0209517_101634913	3300027854	Peatlands Soil	MPNQRDIDRRNDVRFLTPLLLMALVLVIGILVYVYTGHAAAAIG
Ga0209624_109344421	3300027895	Forest Soil	DRVNDAHFLTPLLLIAVIVACGILLYAYTGHALATAG
Ga0316363_102203321	3300030659	Peatlands Soil	RDIDRRNDVRFLTPLLLMALVLVIGILVYAYTGHAAAAIG
Ga0310686_1005396302	3300031708	Soil	MPNQRDRDRANDIHFLTPLLLIAVIVACGILLYAYTGHALAMAG
Ga0310686_1119044903	3300031708	Soil	MPKRNDLDRQNDARLLTGLLLMATILACAILVYAYTGHPLAAGG
Ga0307478_100356624	3300031823	Hardwood Forest Soil	MPEQRDLDRTNDMRFLTPLLVMAVIVVCGILLYAYGGHALAAAG
Ga0306925_103921453	3300031890	Soil	MADQRDLDRRDDMRLLTPLLLVATILAFGILAYALTGHALAAGG
Ga0306923_108172681	3300031910	Soil	MASQQDFDRRNDMRLLTPLLLMATILALGILVYALTGHAIAAGG
Ga0306926_129799251	3300031954	Soil	MASQQDFDRRNDMRLLTPLLLMATILALGILVYALTGHAIA
Ga0306924_106222373	3300032076	Soil	MADQRDLDRRNDMRLLTPLRLMATILAFGILAYALTGHALAAGG
Ga0311301_103618372	3300032160	Peatlands Soil	MANQRDIERRNDIRFLTPRLLIALVLVIGILLYAYTGHAAAAIG
Ga0311301_108360561	3300032160	Peatlands Soil	RDIDRRNDVRFLTPLLLMALVLVIGILVYSYTGHAAAAIG
Ga0335085_1001430816	3300032770	Soil	MPNQRDIDRRNDAKFLTPPLLMAALLACGILLYAYTGHASAMPGYGSI
Ga0335079_106954712	3300032783	Soil	MPNQNDLDHRNDVRLLTPLLLMAAILAVGVLIYAYTGHALAAAS
Ga0335079_113977172	3300032783	Soil	MPNQHDFDRKNDVKFLTPLLLMALVLACGVLLYAYTGHSLAASP
Ga0335078_100474926	3300032805	Soil	MSNQHELDRKNDVKFLTPLLLMALILACGVLLYAYSGYSLAASPA
Ga0335078_100731892	3300032805	Soil	MPTQHDLDRRNDGRFLTPLLLMAVILAMSVLVYVCNGHA
Ga0335078_103912953	3300032805	Soil	MPNQRDLDRRNDTRFLTPLLIMALILAIGILVYAYSGQSLAGAG
Ga0335078_106597332	3300032805	Soil	MPNQSDIDRRNDVRFLTPLLLMALVLVIGILVYAYTGHAAAAIG
Ga0335078_107848971	3300032805	Soil	MPNQHELDRKNDAKFLTPLLLMALILACGVLLFAYAGYSLAASP
Ga0335078_111329672	3300032805	Soil	MVRTVPYQDNRNRKNDIRFLTPLLLMAAILAVGILLFGYAGHALAAAVA
Ga0335078_120894722	3300032805	Soil	MPYHHDLDRKNDIRLLTPLLLMAAILALGVLVYAYTGHALAAPG
Ga0335081_104780672	3300032892	Soil	QHDFDRKNDVKFLTPLLLMALVLACGVLLYAYTGHSLAASP
Ga0335074_101200203	3300032895	Soil	MPNQHERNRSNDVKFLTPLLLMALILACGILLYAYTGHSLAASL
Ga0335074_101497733	3300032895	Soil	MPYQDDSDRRNDIRLLTPLLLMAVIIAVGVLIWAYTGHALAAGG
Ga0335074_104297423	3300032895	Soil	MPDQHDLDRRNDMRLLTPLLLMAAIIALGILVFAYTGHSLAATR
Ga0335075_102579721	3300032896	Soil	MAYHRNDLDRKNDIRLLTPLLLMAAILAVGILIYALTGHSLAA
Ga0335075_103577291	3300032896	Soil	MPYHRNDLDRKNDIRLLTPLLLMAAILAVGILIYALTGHSLAASL
Ga0335075_105036612	3300032896	Soil	MPTQHDLDRRNDMRLLTPLLLMAVILAMGILLYLCNGHGV
Ga0335075_105376612	3300032896	Soil	MPDQSHRHHQTDRDRRNDIRFVTPFLLMATILAVGILIYAYAGHALAAGA
Ga0335077_1002175014	3300033158	Soil	MPNQHDLDHRNDVRLLTPLLLMAAILAVGVLIYAYTGHALAAAS
Ga0335077_115593392	3300033158	Soil	MPNQRDIDRENDIRFMTPLLLMGLILVCGILAYAYTGHPLGAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences