Metagenome / Metatranscriptome Family F096531

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096531
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	71 residues
Representative Sequence	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHALDGAAHR
Number of Associated Samples	77
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.08 %
% of genes near scaffold ends (potentially truncated)	33.65 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.577 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (40.385 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.962 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.12% β-sheet: 0.00% Coil/Unstructured: 31.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01965	DJ-1_PfpI	13.46
PF12833	HTH_18	10.58
PF06240	COXG	9.62
PF13478	XdhC_C	5.77
PF03450	CO_deh_flav_C	4.81
PF13278	Obsolete Pfam Family	4.81
PF00072	Response_reg	1.92
PF00672	HAMP	0.96
PF00486	Trans_reg_C	0.96
PF07728	AAA_5	0.96
PF02233	PNTB	0.96
PF01220	DHquinase_II	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	9.62
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	0.96
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.73 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.73 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	78.85 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	36.54 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	23.08 %
Unclassified	root	N/A	14.42 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	35.58 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	23.08 %
Unclassified	root	N/A	14.42 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Aldersonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia	23.08 %
Unclassified	root	N/A	14.42 %
Tetrasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	7.69 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3.85 %
Phycicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus	1.92 %
Ornithinibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Ornithinibacter	1.92 %
Knoellia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Aldersonia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia	23.08 %
Unclassified	root	N/A	14.42 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	3.85 %
Ornithinibacter aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Ornithinibacter → Ornithinibacter aureus	1.92 %
unclassified Tetrasphaera	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → unclassified Tetrasphaera	1.92 %
Phycicoccus duodecadis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus duodecadis	0.96 %
Phycicoccus jejuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus jejuensis	0.96 %
unclassified Knoellia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → unclassified Knoellia	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Name	Rank	Taxonomy	Distribution
Aldersonia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	23.08 %
Unclassified	root	N/A	14.42 %
Pseudonocardia sp. CNS-139	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	3.85 %
Tetrasphaera sp. Soil756	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → unclassified Tetrasphaera → Tetrasphaera sp. Soil756	1.92 %
Ornithinibacter aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Ornithinibacter → Ornithinibacter aureus	1.92 %
Knoellia sp. Soil729	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → unclassified Knoellia → Knoellia sp. Soil729	0.96 %
Phycicoccus duodecadis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus duodecadis	0.96 %
Phycicoccus jejuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus jejuensis	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_12743279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	592	Open in IMG/M
3300000956\|JGI10216J12902_111422605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	566	Open in IMG/M
3300004463\|Ga0063356_104290045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	613	Open in IMG/M
3300005093\|Ga0062594_101123120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	771	Open in IMG/M
3300005331\|Ga0070670_101225275	Not Available	686	Open in IMG/M
3300005338\|Ga0068868_101243274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300005354\|Ga0070675_100951342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	788	Open in IMG/M
3300005356\|Ga0070674_101665073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	576	Open in IMG/M
3300005547\|Ga0070693_100694927	Not Available	744	Open in IMG/M
3300005616\|Ga0068852_100924111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	890	Open in IMG/M
3300005834\|Ga0068851_10954722	Not Available	539	Open in IMG/M
3300005844\|Ga0068862_100884161	Not Available	877	Open in IMG/M
3300009036\|Ga0105244_10371285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	659	Open in IMG/M
3300009083\|Ga0105047_10006320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	20099	Open in IMG/M
3300009177\|Ga0105248_10982517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	954	Open in IMG/M
3300011119\|Ga0105246_10992623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	760	Open in IMG/M
3300011333\|Ga0127502_10050097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300011333\|Ga0127502_10268429	Not Available	630	Open in IMG/M
3300012212\|Ga0150985_100944646	Not Available	693	Open in IMG/M
3300012212\|Ga0150985_111035281	Not Available	647	Open in IMG/M
3300012469\|Ga0150984_101692071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300012882\|Ga0157304_1098146	Not Available	530	Open in IMG/M
3300012900\|Ga0157292_10009289	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300012903\|Ga0157289_10332374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300012908\|Ga0157286_10035798	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300012909\|Ga0157290_10228895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	648	Open in IMG/M
3300012915\|Ga0157302_10329454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300012915\|Ga0157302_10474567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	534	Open in IMG/M
3300012951\|Ga0164300_10142518	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300012955\|Ga0164298_10629616	Not Available	741	Open in IMG/M
3300012955\|Ga0164298_11445875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	534	Open in IMG/M
3300012961\|Ga0164302_11303136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300012961\|Ga0164302_11462784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	561	Open in IMG/M
3300012984\|Ga0164309_10058210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	2274	Open in IMG/M
3300012984\|Ga0164309_10143354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1577	Open in IMG/M
3300012985\|Ga0164308_10050139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → unclassified Tetrasphaera → Tetrasphaera sp. Soil756	2693	Open in IMG/M
3300012985\|Ga0164308_10265731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1345	Open in IMG/M
3300012987\|Ga0164307_10015746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	3796	Open in IMG/M
3300012987\|Ga0164307_10443480	Not Available	967	Open in IMG/M
3300012988\|Ga0164306_10140228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1634	Open in IMG/M
3300013104\|Ga0157370_11967924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	524	Open in IMG/M
3300013296\|Ga0157374_11971593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	610	Open in IMG/M
3300013306\|Ga0163162_11396549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	797	Open in IMG/M
3300013307\|Ga0157372_11015793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	960	Open in IMG/M
3300014325\|Ga0163163_10866075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	967	Open in IMG/M
3300014325\|Ga0163163_11167199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300014325\|Ga0163163_12670282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	557	Open in IMG/M
3300014326\|Ga0157380_10060930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	3017	Open in IMG/M
3300014326\|Ga0157380_10935364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300014326\|Ga0157380_13177724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300014968\|Ga0157379_10856201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	860	Open in IMG/M
3300015201\|Ga0173478_10046949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus duodecadis	1395	Open in IMG/M
3300015374\|Ga0132255_103296170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	688	Open in IMG/M
3300017792\|Ga0163161_10061626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	2731	Open in IMG/M
3300017965\|Ga0190266_10079466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	1278	Open in IMG/M
3300017965\|Ga0190266_10304664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300017965\|Ga0190266_11028738	Not Available	554	Open in IMG/M
3300018432\|Ga0190275_10237342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	1750	Open in IMG/M
3300018432\|Ga0190275_11854889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	681	Open in IMG/M
3300018432\|Ga0190275_12178566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300018432\|Ga0190275_13437305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300018465\|Ga0190269_10525260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → unclassified Tetrasphaera → Tetrasphaera sp. Soil756	776	Open in IMG/M
3300018466\|Ga0190268_10461846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	845	Open in IMG/M
3300018469\|Ga0190270_10161441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1837	Open in IMG/M
3300018469\|Ga0190270_10560252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	1104	Open in IMG/M
3300018469\|Ga0190270_10844313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	927	Open in IMG/M
3300018469\|Ga0190270_12638150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	565	Open in IMG/M
3300018476\|Ga0190274_10105768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2253	Open in IMG/M
3300018476\|Ga0190274_12078543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300018481\|Ga0190271_10135684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	2346	Open in IMG/M
3300018481\|Ga0190271_11573543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	773	Open in IMG/M
3300018920\|Ga0190273_10045351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2184	Open in IMG/M
3300018920\|Ga0190273_10255319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1140	Open in IMG/M
3300019356\|Ga0173481_10085943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1175	Open in IMG/M
3300020081\|Ga0206354_10311244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	1605	Open in IMG/M
3300020081\|Ga0206354_10320585	Not Available	778	Open in IMG/M
3300022891\|Ga0247770_1260866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	529	Open in IMG/M
3300023079\|Ga0247758_1149622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → unclassified Knoellia → Knoellia sp. Soil729	646	Open in IMG/M
3300023269\|Ga0247773_1174062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	651	Open in IMG/M
3300025901\|Ga0207688_10807888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	594	Open in IMG/M
3300025940\|Ga0207691_11605268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	529	Open in IMG/M
3300025941\|Ga0207711_12131395	Not Available	503	Open in IMG/M
3300026121\|Ga0207683_10894651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	824	Open in IMG/M
3300028732\|Ga0302264_1019929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1543	Open in IMG/M
3300028802\|Ga0307503_10082570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	1324	Open in IMG/M
3300028803\|Ga0307281_10355175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	555	Open in IMG/M
3300028869\|Ga0302263_10034935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1975	Open in IMG/M
3300028870\|Ga0302254_10252156	Not Available	650	Open in IMG/M
3300030010\|Ga0302299_10098221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1612	Open in IMG/M
3300030336\|Ga0247826_10060164	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300030838\|Ga0311335_10130187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1645	Open in IMG/M
3300031938\|Ga0308175_100739263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1072	Open in IMG/M
3300031938\|Ga0308175_100910989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	967	Open in IMG/M
3300031939\|Ga0308174_10002864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Ornithinibacter → Ornithinibacter aureus	8601	Open in IMG/M
3300031939\|Ga0308174_10492478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1002	Open in IMG/M
3300031996\|Ga0308176_10860323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus jejuensis	950	Open in IMG/M
3300032013\|Ga0310906_10137369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1406	Open in IMG/M
3300032074\|Ga0308173_11762922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300032420\|Ga0335397_10081101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Ornithinibacter → Ornithinibacter aureus	3416	Open in IMG/M
3300033550\|Ga0247829_11109079	Not Available	657	Open in IMG/M
3300034127\|Ga0370489_0003877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	3478	Open in IMG/M
3300034127\|Ga0370489_0270488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	512	Open in IMG/M
3300034128\|Ga0370490_0033110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1709	Open in IMG/M
3300034691\|Ga0370488_255548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.19%
Host-Associated	Host-Associated	29.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.35%
Plants	Host-Associated → Plants	29.81%
Aquatic	Environmental → Aquatic	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.54%
Peat	Environmental → Terrestrial → Peat	4.81%
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.88%
Roots	Host-Associated → Plants → Roots	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.92%
Ice	Environmental → Aquatic → Freshwater → Ice	1.92%
Loam	Environmental → Terrestrial → Soil → Loam	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.58%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.92%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	40.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.65%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009083	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022891	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L136-409B-6	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300023269	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034691	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_127432791	3300000891	Soil	MDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIANEIHSLDGAAHR*
JGI10216J12902_1114226051	3300000956	Soil	VLRQTRAMDTNSTLETIVTIAALGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADTRRVANEIHGLDGAAHR*
Ga0063356_1042900452	3300004463	Arabidopsis Thaliana Rhizosphere	MNTNSIAETIAIIAALGGLAAPVAYLMERTHRRDRREHGIRTTWTWTRHDADTRRIADELSAFTGAAHR*
Ga0062594_1011231202	3300005093	Soil	MDTNSTLETILTLAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR*
Ga0070670_1012252752	3300005331	Switchgrass Rhizosphere	MDTNSTLETILTLAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTSYDADTRRVANEIHGLDGAA
Ga0068868_1012432742	3300005338	Miscanthus Rhizosphere	FRHSWQVLVEQQTCAMDTNSTLETILTLAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR*
Ga0070675_1009513422	3300005354	Miscanthus Rhizosphere	VQRQTYAMDTNSTLETIITFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0070674_1016650731	3300005356	Miscanthus Rhizosphere	MDTNSTLETIITFAAIGGLMAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0070693_1006949271	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	RRFRHSWQVLVERQTIAMDTNSTLETIVTIAALGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLDGAAHR*
Ga0068852_1009241112	3300005616	Corn Rhizosphere	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLDGAAHR*
Ga0068851_109547222	3300005834	Corn Rhizosphere	AMDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLDGAAHR*
Ga0068862_1008841611	3300005844	Switchgrass Rhizosphere	MDTNSTLETIITFAAIGGLVAPVVYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0105244_103712852	3300009036	Miscanthus Rhizosphere	MDTNSTLETIITFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHALDGAAHR*
Ga0105047_1000632016	3300009083	Freshwater	MDTNSTLETILTLAAIGGLVAPVAYLIERTNRRDRREHGARTTWAWTRYDADSRRIANEIHALDGAAHR*
Ga0105248_109825172	3300009177	Switchgrass Rhizosphere	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERRDHGARTTWTWTRYDADARRVGNEIHALDGAAHR*
Ga0105246_109926232	3300011119	Miscanthus Rhizosphere	MDTNSTLETIVTIAALGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADTRRVANEIHGLDGAAHR*
Ga0127502_100500971	3300011333	Soil	LETILTIAAIGGLAAPIAYLVERTHRRDRREHGARTTWTWTRSDADSRRVADEIHALDGAAHR*
Ga0127502_102684291	3300011333	Soil	MDTNTIFETLATVATLGALATPIVLLLERSHRRERREHGIRTSWTTSGPDADTRRIADEIHALDGAAHR*
Ga0150985_1009446462	3300012212	Avena Fatua Rhizosphere	LETIITFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR*
Ga0150985_1110352811	3300012212	Avena Fatua Rhizosphere	RHSWQVLVLGQTRAMDTNSTLETVLTLAAIGGLLAPVAYLMERSNRRERREHGARTTWTWTRYDADARRVGNEIHGLDGAAHR*
Ga0150984_1016920712	3300012469	Avena Fatua Rhizosphere	HFRHSWQVLVEQQTRAMDTNSTLETIITFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR*
Ga0157304_10981462	3300012882	Soil	DTNSTLETIVTIAALGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADTRRVANEIHGLDGAAHR*
Ga0157292_100092893	3300012900	Soil	MDTNSTLETIITFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0157289_103323742	3300012903	Soil	MDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0157286_100357982	3300012908	Soil	MDTNSTYETIITFAAIGGLVAPVVYLIERTNRRERREHGARTTWTWTRYDADTRRVANEIHALDGVAHR*
Ga0157290_102288952	3300012909	Soil	LVQHQTYAMDTNSTLETIITFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0157302_103294541	3300012915	Soil	SWQVLVQRQTYAMDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0157302_104745672	3300012915	Soil	MDTNSTLETIVTIAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADTRRVANEIHALDGVAHR*
Ga0164300_101425181	3300012951	Soil	MDTNSTLETIITFAAIGGLVAPVAYLMERTNRRERREHGTRTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0164298_106296162	3300012955	Soil	IDVHRHIRHSWQVLIEAQTRAMDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLDGAAHR*
Ga0164298_114458751	3300012955	Soil	MDTNSTLETILTLAALGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRVANEIHALDG
Ga0164302_113031362	3300012961	Soil	LIEAQTRAMDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0164302_114627842	3300012961	Soil	MDTNSTFETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRVANEIHALDGAA
Ga0164309_100582102	3300012984	Soil	MDTNSTLETILTLAAIVGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRVANEIHALDGAAHR*
Ga0164309_101433542	3300012984	Soil	LIEAQTRAMDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLGGAAHR*
Ga0164308_100501392	3300012985	Soil	MDTNSTLETILTLAALGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRVANEIHALDGAAHR*
Ga0164308_102657312	3300012985	Soil	MDTNSTLETIITFAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0164307_100157463	3300012987	Soil	MDTNSTFETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRVANEIHALDGAAHR*
Ga0164307_104434801	3300012987	Soil	VHRHIRHSWQVLIEAQTRAMDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLDGAAHR*
Ga0164306_101402282	3300012988	Soil	MDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLDGAAHR*
Ga0157370_119679242	3300013104	Corn Rhizosphere	MVQQQTRAMDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR*
Ga0157374_119715932	3300013296	Miscanthus Rhizosphere	MDTNSTLETILTLAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAALR*
Ga0163162_113965492	3300013306	Switchgrass Rhizosphere	MDTNSTLETIITFAAIGGLLAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0157372_110157932	3300013307	Corn Rhizosphere	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR*
Ga0163163_108660752	3300014325	Switchgrass Rhizosphere	MDTNSTLETIVTIAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADTRRVANEIHGLDGAAHR*
Ga0163163_111671992	3300014325	Switchgrass Rhizosphere	CHTRHWWQVLVERQTRAMDTNTALDTFFTLASLGGIAAALGVLMERSHRRERREHGARTTWTWTRHDADSRRVADEIHALDGAAHR*
Ga0163163_126702822	3300014325	Switchgrass Rhizosphere	MDTNSTLETILTLAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADARRV
Ga0157380_100609302	3300014326	Switchgrass Rhizosphere	MDTNSTLETIITFADIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR*
Ga0157380_109353642	3300014326	Switchgrass Rhizosphere	AAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADTRRVANEIHALDGVAHR*
Ga0157380_131777241	3300014326	Switchgrass Rhizosphere	SWQEVVQQQTRAMDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR*
Ga0157379_108562013	3300014968	Switchgrass Rhizosphere	ETIITLAAIGGLVATVAYLMERTNRRERREHGARTTWTWTRYDSDPRRIADEIHSLDGAAHR*
Ga0173478_100469492	3300015201	Soil	MDTNSTLETIITFAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADNRRIANEIHSLDGAAHR*
Ga0132255_1032961702	3300015374	Arabidopsis Rhizosphere	MDTNSTLETIITFAAIGGLVAPVAYLMERSNRRERREHGARTTWTWTRYDADSRRIANEIPSLDGAAHR*
Ga0163161_100616264	3300017792	Switchgrass Rhizosphere	MDTNSTLETIITFAAIGGLLAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR
Ga0190266_100794662	3300017965	Soil	VERQTNALDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTGTWTRYDADSRRIANEIHSLDGAAHR
Ga0190266_103046642	3300017965	Soil	MNTNTALDTVFTLAALGGIAVPLAVLMERSHRRERREHGARTTWTWTRHDADSRRIADEIHALDGATHR
Ga0190266_110287381	3300017965	Soil	TLLTLAALGGIAAPLAFLMERSHRRERREHGARTTWTWTSHDADSRRVADEIHALDGAAH
Ga0190275_102373422	3300018432	Soil	MDTNSTLDSIFGLLATGAVLAPVAYLLERTHRRDRREHGTRTSWTPAPHDADRRRIADDLSSVTGSAHR
Ga0190275_118548892	3300018432	Soil	MDTNSTLETIVTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRVANEIHGLDGAAHR
Ga0190275_121785662	3300018432	Soil	DRQTRAMDTNTALDTILALAALGGIAAPLAVLMERSHRRERREHGARTTWTWTRHDADSRRVADEIHALDGAAHR
Ga0190275_134373051	3300018432	Soil	VWQILDVLRHFRHSWQVLVLRQTRAMDTNSTLETIVTLAAIGGLVAPVAYLMERSNRRERREHGARTTWTWTRHDSDSRRIANEIHSLDGAAHR
Ga0190269_105252602	3300018465	Soil	MDTNSTLETIITIAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRHDADSRRIANEIHSLDGAAHR
Ga0190268_104618462	3300018466	Soil	MDTNTVVETLVTIAALGGLAAPIAVLLERSHRRERREHGVRTSWTSWGSGPHDADTRRIADEIHLLDGAAHR
Ga0190270_101614413	3300018469	Soil	MDTNSTLETIITFAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADIRRIANEIHSLDGAAHR
Ga0190270_105602521	3300018469	Soil	MDTNSTLETIVTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRVANEIHGL
Ga0190270_108443132	3300018469	Soil	MDTNTVVETLVTIAALGGLAAPIAVLLERSHRRERREHGVRTSWTSWTAGPHDADTRRIADEIHLLDGAAHR
Ga0190270_126381502	3300018469	Soil	MDTNTAFDTIFALAALGGIAAPLAVLMERSHRRERREHGARTTWTWTRHDADSRRVADEIHALDGAAHR
Ga0190274_101057683	3300018476	Soil	MDTNSTLETIITFAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADNRRIANEIHSLDGAAHR
Ga0190274_120785432	3300018476	Soil	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRHDADSRRVADEIHALDGAAHR
Ga0190271_101356842	3300018481	Soil	MDTNSTLETIVTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRVANEIHALDGAAHR
Ga0190271_115735432	3300018481	Soil	MDTNSILETIATIAAIGALAAPVAYLMERTHRRDRREHGIRTTWTWTTQDADTRRIAD
Ga0190273_100453512	3300018920	Soil	MDTNSTLETIFTLAALGGLVAPVAYLMERTNRRERREHGARTTWTQTHHDADNRRIANEIHSLDGAAHL
Ga0190273_102553191	3300018920	Soil	QRIDVPRPFRHWWQVLVEQQTRAMDTNSTLETILTLAALGGLLAPVAYLMERSNRRERREHGARTTWTWTRHDADNRRIADEIHSLDGAAHL
Ga0173481_100859432	3300019356	Soil	MDTNSTLETIITFAAIGGLMAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR
Ga0206354_103112443	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNSTLETILTLAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR
Ga0206354_103205851	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNSTLETIITLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLDGAAHR
Ga0247770_12608662	3300022891	Plant Litter	MDTNSTLETIITFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR
Ga0247758_11496222	3300023079	Plant Litter	TFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR
Ga0247773_11740622	3300023269	Plant Litter	MDTNSTLETIITFAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRVANEIHALDGAAHR
Ga0207688_108078881	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDTNSTLETILTFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR
Ga0207691_116052681	3300025940	Miscanthus Rhizosphere	MDTNSTLETIVTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRVANEI
Ga0207711_121313951	3300025941	Switchgrass Rhizosphere	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERRDHGARTTWTWTRYDADARRVGNEIHALDGAAHR
Ga0207683_108946512	3300026121	Miscanthus Rhizosphere	VLRQTRAMDTNSTLETIVTIAALGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADTRRVANEIHGLDGAAHR
Ga0302264_10199293	3300028732	Fen	MDTNSTLETILTLAAIGGLLAPVAYLMERTTWTWTRHDADARRIGNEIHALDGAAHR
Ga0307503_100825701	3300028802	Soil	MDTNSTLETIITFAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR
Ga0307281_103551751	3300028803	Soil	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADSRRIANEIHALDGAAHR
Ga0302263_100349353	3300028869	Fen	TLETILTLAAIGGLLAPVAYLMERSNRRERREHGARTTWTWTRHDADARRIGNEIHALDGAAHR
Ga0302254_102521561	3300028870	Fen	MDTNSTLETILTLAAIGGLLAPVAYLMERSNRRERREHGARTTWTWTRHDADARRIGNEIHALDGAAHR
Ga0302299_100982211	3300030010	Fen	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADARRVGNEIHALDGAAHR
Ga0247826_100601643	3300030336	Soil	MDTNSTLETIVTIAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDADTRRVANEIHALDGVAHR
Ga0311335_101301873	3300030838	Fen	HQTCAMDTNSTLETILTLAAIGGLLAPVAYLMERSNRRERREHGARTTWTWTRHDADARRIGNEIHALDGAAHR
Ga0308175_1007392631	3300031938	Soil	QIIDVHRHIRHSWQVLVERQTRAMDTNSTLETILTLAAIGGLVAPVAYLMERSNRRERREHGARTTWTWTRYDSDSRRVANEIHALDGAAHR
Ga0308175_1009109892	3300031938	Soil	MLRQTRAMDTNSTLETVLTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRHDADARRVGDEIHALDGAAHR
Ga0308174_100028644	3300031939	Soil	MDTNSTLETILTLAAIGGLVAPVAYLMERSNRRERHEHGARTTWTWTRYDSDTRRIANEIHSLDGAAHR
Ga0308174_104924782	3300031939	Soil	MDTNSTLETVLTLAAIGGLLAPVAYLMERSNRRERREHGARTTWTWTRYDSDARRVGDEIHALDGAAHR
Ga0308176_108603232	3300031996	Soil	MQRQTRAMDTNSTLETVLTLAAIGGLVAPVAYLMERTNRRERREHGRRTSWTTAGHDADQRRIADELSA
Ga0310906_101373691	3300032013	Soil	TIAALGALAAPVAYLIERTHRRDRREHGIRTTWTWTRHDADTRRIADELSAFTGAAHR
Ga0308173_117629221	3300032074	Soil	HIRHSWQVLVEAQTRAMDTNSTLETILTLAAIGGLVAPVAYLMERSNRRERREHGARTTWTWTRYDSDTRRIANEIHSLDGAAHR
Ga0335397_100811014	3300032420	Freshwater	MDTNSTLETILTLAAIGGLVAPVAYLIERTNRRDRREHGARTTWAWTRYDADSRRIANEIHALDGAAHR
Ga0247829_111090791	3300033550	Soil	DVPRLFRHSWQVLVQRQTYAMDTNSTLETIITFAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDADSRRIANEIHSLDGAAHR
Ga0370489_0003877_3168_3377	3300034127	Untreated Peat Soil	MDTNSTLETIVTLAAIGGLVAPVAYLIERTNRRERREHGARTTWTWTRYDSDSRRIANEIHALDGAAHR
Ga0370489_0270488_1_192	3300034127	Untreated Peat Soil	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIADEIHSLD
Ga0370490_0033110_195_404	3300034128	Untreated Peat Soil	MDTNSTLETIITLAAIGGLVAPVAYLMERTDRRERREHGARTTWTWTRHDADARRVGNEIHALDGAAHR
Ga0370488_255548_256_465	3300034691	Untreated Peat Soil	MDTNSTLETILTLAAIGGLVAPVAYLMERTNRRERREHGARTTWTWTRYDSDTRRIANEIHSLDGAAHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096531

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences