NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096517

Metagenome / Metatranscriptome Family F096517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096517
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 45 residues
Representative Sequence PGGPAVWVAAVIATVLLLRWPRLHPLVLFAASGALFGLVGLW
Number of Associated Samples 87
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.90 %
% of genes near scaffold ends (potentially truncated) 96.15 %
% of genes from short scaffolds (< 2000 bps) 87.50 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (75.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(55.769 % of family members)
Environment Ontology (ENVO) Unclassified
(67.308 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(51.923 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 48.57%    β-sheet: 0.00%    Coil/Unstructured: 51.43%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF08734GYD 63.46
PF08448PAS_4 9.62
PF04343DUF488 6.73
PF13673Acetyltransf_10 4.81
PF01522Polysacc_deac_1 3.85
PF02417Chromate_transp 3.85
PF13426PAS_9 1.92
PF08241Methyltransf_11 0.96
PF00496SBP_bac_5 0.96
PF00296Bac_luciferase 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 63.46
COG3189Uncharacterized conserved protein YeaO, DUF488 familyFunction unknown [S] 6.73
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 3.85
COG2059Chromate transport protein ChrAInorganic ion transport and metabolism [P] 3.85
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.96 %
UnclassifiedrootN/A24.04 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005559|Ga0066700_10756551All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005561|Ga0066699_10186554All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300005764|Ga0066903_105583192All Organisms → cellular organisms → Bacteria → Proteobacteria662Open in IMG/M
3300005764|Ga0066903_105838624All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300009090|Ga0099827_11574703Not Available572Open in IMG/M
3300009137|Ga0066709_100508935All Organisms → cellular organisms → Bacteria1697Open in IMG/M
3300009143|Ga0099792_10623009Not Available690Open in IMG/M
3300010046|Ga0126384_10134092All Organisms → cellular organisms → Bacteria1884Open in IMG/M
3300010047|Ga0126382_11014459All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300010048|Ga0126373_11852297All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300010360|Ga0126372_12653659Not Available553Open in IMG/M
3300010366|Ga0126379_13588260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria520Open in IMG/M
3300011270|Ga0137391_10422631All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300011271|Ga0137393_11298908Not Available616Open in IMG/M
3300012202|Ga0137363_10508127All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1013Open in IMG/M
3300012361|Ga0137360_11843147Not Available511Open in IMG/M
3300012917|Ga0137395_11188231Not Available535Open in IMG/M
3300012922|Ga0137394_10455662All Organisms → cellular organisms → Bacteria → Proteobacteria1088Open in IMG/M
3300012922|Ga0137394_10841122All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria768Open in IMG/M
3300015241|Ga0137418_10613734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria851Open in IMG/M
3300016319|Ga0182033_12202678All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300016371|Ga0182034_11460373Not Available598Open in IMG/M
3300016387|Ga0182040_11167931Not Available647Open in IMG/M
3300016404|Ga0182037_10818013All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium804Open in IMG/M
3300016404|Ga0182037_11052984All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales710Open in IMG/M
3300016404|Ga0182037_11169710All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300016422|Ga0182039_10765734All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300016422|Ga0182039_11706443All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300017955|Ga0187817_10183498All Organisms → cellular organisms → Bacteria → Proteobacteria1332Open in IMG/M
3300021404|Ga0210389_10391877All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1092Open in IMG/M
3300022525|Ga0242656_1042294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria767Open in IMG/M
3300022721|Ga0242666_1000370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4677Open in IMG/M
3300022726|Ga0242654_10139358All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300022726|Ga0242654_10222184Not Available666Open in IMG/M
3300027903|Ga0209488_11185072Not Available515Open in IMG/M
3300031543|Ga0318516_10053921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2195Open in IMG/M
3300031545|Ga0318541_10598251All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300031564|Ga0318573_10190239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1086Open in IMG/M
3300031572|Ga0318515_10211852All Organisms → cellular organisms → Bacteria → Proteobacteria1039Open in IMG/M
3300031640|Ga0318555_10469653Not Available682Open in IMG/M
3300031668|Ga0318542_10604268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria572Open in IMG/M
3300031679|Ga0318561_10443729Not Available714Open in IMG/M
3300031680|Ga0318574_10700917Not Available593Open in IMG/M
3300031682|Ga0318560_10533913All Organisms → cellular organisms → Bacteria → Proteobacteria636Open in IMG/M
3300031708|Ga0310686_104395668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1373Open in IMG/M
3300031708|Ga0310686_110247311All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales6440Open in IMG/M
3300031708|Ga0310686_112662602All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300031719|Ga0306917_10945534Not Available674Open in IMG/M
3300031723|Ga0318493_10719815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria560Open in IMG/M
3300031723|Ga0318493_10868853Not Available510Open in IMG/M
3300031736|Ga0318501_10359151All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300031747|Ga0318502_10896650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria539Open in IMG/M
3300031748|Ga0318492_10802353All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300031763|Ga0318537_10354565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium541Open in IMG/M
3300031765|Ga0318554_10073647All Organisms → cellular organisms → Bacteria1895Open in IMG/M
3300031768|Ga0318509_10830034Not Available511Open in IMG/M
3300031771|Ga0318546_10326501All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300031771|Ga0318546_10427279All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300031777|Ga0318543_10033982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2002Open in IMG/M
3300031777|Ga0318543_10277151All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300031780|Ga0318508_1010766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2057Open in IMG/M
3300031782|Ga0318552_10706382Not Available514Open in IMG/M
3300031792|Ga0318529_10384519Not Available653Open in IMG/M
3300031795|Ga0318557_10104405All Organisms → cellular organisms → Bacteria → Proteobacteria1256Open in IMG/M
3300031796|Ga0318576_10152483All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300031797|Ga0318550_10512131All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium579Open in IMG/M
3300031799|Ga0318565_10385206All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300031819|Ga0318568_10139953All Organisms → cellular organisms → Bacteria1474Open in IMG/M
3300031832|Ga0318499_10307123Not Available612Open in IMG/M
3300031845|Ga0318511_10317819All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium705Open in IMG/M
3300031846|Ga0318512_10282961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria822Open in IMG/M
3300031880|Ga0318544_10176134All Organisms → cellular organisms → Bacteria → Proteobacteria824Open in IMG/M
3300031896|Ga0318551_10165870All Organisms → cellular organisms → Bacteria1211Open in IMG/M
3300031912|Ga0306921_10012731All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9020Open in IMG/M
3300031912|Ga0306921_10117341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3098Open in IMG/M
3300031912|Ga0306921_10294003All Organisms → cellular organisms → Bacteria → Proteobacteria1902Open in IMG/M
3300031912|Ga0306921_10555208All Organisms → cellular organisms → Bacteria → Proteobacteria1332Open in IMG/M
3300031941|Ga0310912_10627353All Organisms → cellular organisms → Bacteria → Proteobacteria835Open in IMG/M
3300031942|Ga0310916_10764299All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300031945|Ga0310913_11064772Not Available565Open in IMG/M
3300031947|Ga0310909_10405015All Organisms → cellular organisms → Bacteria → Proteobacteria1145Open in IMG/M
3300031954|Ga0306926_11104412All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300032001|Ga0306922_10197165All Organisms → cellular organisms → Bacteria → Proteobacteria2161Open in IMG/M
3300032010|Ga0318569_10156431All Organisms → cellular organisms → Bacteria → Proteobacteria1050Open in IMG/M
3300032042|Ga0318545_10240397Not Available650Open in IMG/M
3300032044|Ga0318558_10044817All Organisms → cellular organisms → Bacteria1933Open in IMG/M
3300032051|Ga0318532_10233200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales653Open in IMG/M
3300032055|Ga0318575_10115912All Organisms → cellular organisms → Bacteria → Proteobacteria1311Open in IMG/M
3300032055|Ga0318575_10237249All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300032055|Ga0318575_10335874All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300032059|Ga0318533_11365380All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300032060|Ga0318505_10031841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2157Open in IMG/M
3300032063|Ga0318504_10454875Not Available612Open in IMG/M
3300032064|Ga0318510_10486283All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon533Open in IMG/M
3300032065|Ga0318513_10639777All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300032076|Ga0306924_10083520All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3584Open in IMG/M
3300032089|Ga0318525_10158503All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300032261|Ga0306920_100327412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2281Open in IMG/M
3300032261|Ga0306920_103923469Not Available541Open in IMG/M
3300032783|Ga0335079_12359782All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300032828|Ga0335080_12141617All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300033290|Ga0318519_10288997All Organisms → cellular organisms → Bacteria → Proteobacteria957Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil55.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.31%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.92%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066700_1075655133300005559SoilVSPGGPAIWIAAAVATGLLLTWPRLHPLTLFAAGGALFGLVALW*
Ga0066699_1018655443300005561SoilGGIAVLRVSPGGPAVWIAAGVATALLLGWRRLHPLWLFAASGALFGFVAWLD*
Ga0066903_10558319213300005764Tropical Forest SoilRVSPGGTAVWAAAIIATVLLLRWPRLHPLVLFAACGALFGLVAVW*
Ga0066903_10583862413300005764Tropical Forest SoilLRVSPGGPAVWVAAVIATVLLLRWPRLHPLVLFATSGVLFGLAGLTGLR*
Ga0099827_1157470323300009090Vadose Zone SoilGGPAVWAAAVASTALILRWPGLHPLALFATGGVLFGLADATGLW*
Ga0066709_10050893543300009137Grasslands SoilWIAAGVATALLLGWRRLHPLWLFAASGALFGFVAWLD*
Ga0099792_1062300913300009143Vadose Zone SoilLRVSPGGPAVWTAAVVATVLLLHWPRFHPLILFAAGGALFGLAGATGVW*
Ga0126384_1013409213300010046Tropical Forest SoilPGGPAVWVAAVIATVLLLRWPRLHPLVLFAASGALFGLVGLW*
Ga0126382_1101445923300010047Tropical Forest SoilGLILAGGIAVMRVSPGGPAVWAAAIASTALILRWPSLHPLALFAASGALFGVAAGLAG*
Ga0126373_1185229733300010048Tropical Forest SoilAAIIATVLLLRWPQLHPLALFATCGALFGLAGLW*
Ga0126372_1265365913300010360Tropical Forest SoilIWVAAIIATVLLLRWPRLHPLALFAGGGALFGLAALW*
Ga0126379_1358826023300010366Tropical Forest SoilGGIAVLRVSPGGTAVWAAAIIATVLLLRWPRLHPLVLFAACGALFGLVAVW*
Ga0137391_1042263133300011270Vadose Zone SoilSPGGPAVWVAAIVSTALILRWPGLHPLALFAVGGALFGLADATGLW*
Ga0137393_1129890823300011271Vadose Zone SoilSGGIAVLRVSPGGPAVWAAAVASTALILRWPGLHPLALFVIGGALFGLADATGLW*
Ga0137363_1050812723300012202Vadose Zone SoilGLAPIAAGLILSGGIAVLRVSPGGPAVWAAAVASTALILRWPGLHPLALFATGGVLFGLADATGLW*
Ga0137360_1184314713300012361Vadose Zone SoilPAIWIAAAVATVLLLCWPRLHPLVLFAAGGALFGLAGVW*
Ga0137390_1195073223300012363Vadose Zone SoilAPIAAGLILSGGIAVLRISPGGPAVWVAAVASTALILRWPGLHPLALFATGGVLFGLADALGVW*
Ga0137395_1118823113300012917Vadose Zone SoilVASTALILRWPGLHPLALFATGGVLFGLADATGLW*
Ga0137394_1045566233300012922Vadose Zone SoilAAAVATVLLLCWPRLHPLTLFAAGGALFGLAALW*
Ga0137394_1084112233300012922Vadose Zone SoilVWAAAVVATVLLLHWPRFHPLILFAAGGALFGLAGATGVW*
Ga0137418_1061373423300015241Vadose Zone SoilLILSGGIAVLRVSPGGPAVWAAAVASTALILRWPGLHPLALFATGGVLFGLADATGLW*
Ga0182033_1220267823300016319SoilGGAAVWGAAIVATVLLLRWPRLHPLTLFAASGGLFGLAASLDR
Ga0182034_1146037323300016371SoilGLILSGGVAVLRVSPGGAAVWMAAVAATVLLLRWPWLHPLALFAASGALFGLVGLW
Ga0182040_1116793133300016387SoilSPGGPAVWAAAVVATVLLLRWPRLHPLSLFATSGALFGLAALW
Ga0182037_1081801333300016404SoilAAGLIRSGGVAVLRVSPGGAAVWMAAVAATVLLLRWPWLHPLALFATSGALFGLVGLW
Ga0182037_1105298433300016404SoilVLRISPGGPTVWAAAIIATVLLLRWPRLHPLALFATCGTLFGVAALW
Ga0182037_1116971033300016404SoilAVWMAAVAATVLLLRWPWLHPLALFAASGALFGLVGLW
Ga0182039_1076573433300016422SoilVWAAAIIATVVLLRWPRLHPLALFAAGGALFGLAALW
Ga0182039_1170644323300016422SoilVWGAAIVATVVLLRWPRLNPLILFAISGALFGLAAAFGR
Ga0187817_1018349813300017955Freshwater SedimentAGGAAAWAAAAVATGILLRWPRLNPLILFGVSGVLFVIAAAFPR
Ga0210389_1039187713300021404SoilVLRASPGGPAVWVAAVIATVLLLRWPRLHPLVLFATSGALFGLAGLAGLG
Ga0242656_104229433300022525SoilSGGIAVLRVSPGGPAVWAAAVVATVSLLHWPRFHPLILFAAGGALFGLAGATGVW
Ga0242662_1011778133300022533SoilRVAPGGPPVWFAATLSTAVILCWPRLHPLVLFAAAGALFGLAVAIGLW
Ga0242666_100037013300022721SoilAVWAAAAVATGVLLRWPRLNPLILFGASGVLFAVAALFGR
Ga0242654_1013935833300022726SoilRVSPGGPAIWIAAAVATVLLLSWPRLHPLILFAVGGALFGLVGVW
Ga0242654_1022218413300022726SoilRVSPGGPAIWIAAAVATVLLLSWPPLHPLVLFAVGGALFGFAGATGVW
Ga0209488_1118507223300027903Vadose Zone SoilRGPAVWAAAVVATVLLLHWPRFHPLILFAAGGALFGLAGATGVW
Ga0318516_1005392143300031543SoilWMAVLGSTVLLLRWPRLHPLALFAAGGGLFGLAAVTGWW
Ga0318541_1059825133300031545SoilVWVAAGVGTVLLLRWPRLHPLALFVAGGALSGLTALW
Ga0318573_1019023923300031564SoilLRVSPGGAAVWMAALASTVLLLRWPQLHPLALFAAGGGLFGLAAVTGLW
Ga0318515_1021185213300031572SoilWMAAVAATVLLLRWPWLHPLALFAASGALFGLVGLW
Ga0318555_1046965313300031640SoilAALASTALLLCWPRLRPLALFAAGGGLFGLAAVTGLW
Ga0318542_1060426813300031668SoilGIAVLRVSPGGPAVWAAAVIATVLLLRWPRLHPLALFAASGALFGVVALW
Ga0318561_1044372913300031679SoilMAVLRVSPGGAEVWVAALASTALLLCWPRLRPLALFAAGGGLFGLAAVTGLW
Ga0318574_1070091713300031680SoilASAIIATVLLLRWPRLHPLMLFAAGGALFGLAALW
Ga0318560_1053391333300031682SoilVSPGGAAVWVAAIASTALILRWPGLHPLLLFVIGGVVFGLAEATGMW
Ga0310686_10439566813300031708SoilLAVWAAALVATVVLLRWPKLHPLALFAASGALFGLAAALGR
Ga0310686_110247311123300031708SoilVAAFAATALLLLWPRLNPLALFAVSGALFGLAACLVG
Ga0310686_11266260213300031708SoilVWAAAIVATVVLLRWPRLNPLILFAASGALFGIAACFGE
Ga0306917_1094553433300031719SoilVAAGLILSGGVAVLRVSPGGAAVWMAAVAATVLLLRWPWLHPLALFAASGALFGLVGLW
Ga0318493_1071981513300031723SoilAAGLVLSGGIAVLRVSPGGAAVWLAAVAATVLLLRWSQLHPLALFAIGGALFGLAGLW
Ga0318493_1086885313300031723SoilLAAVVATVLLLRWPRLHPLALFAAGGALFGLAVLW
Ga0318501_1035915133300031736SoilGAAVWMAAVAATVLLLRWPWLHPLALFAASGALFGLVGLW
Ga0318502_1089665023300031747SoilPIAAGLILSGGVAVLRVSPGGAAVWTAAVAATVLLLRWPQLHPLALFAIGGALFGLASLW
Ga0318492_1080235323300031748SoilVAPGGAAMGAAAIAATAILLRWPRLHPLALFAANGAMFGVAAVLGA
Ga0318537_1035456523300031763SoilLRVSPGGAAVWMAALASTVLLLRWPQLHPLALFAAGGGLFGLAAVTGWW
Ga0318554_1007364743300031765SoilAAAIIATVLLMRWPRLHPLVLFAAGGALFGLAGLW
Ga0318509_1083003423300031768SoilSPGGPAVWAAAVIATLLLLRWPRLHPLALFATSGALFGATALW
Ga0318546_1032650133300031771SoilVLRVSPGGPPVWVAAVIATVLLLRWPRLHPLVLFAASGALFGLVGLW
Ga0318546_1042727923300031771SoilALASTVLLLRWPQLHPLALFAAGGGLFGLAAVTGLW
Ga0318543_1003398253300031777SoilPGGWAIWVAAIVATVLLLRWPRLHPLALFATCGALFGLAGLW
Ga0318543_1027715113300031777SoilAAVWMAAVAATVLLLRWPWLHPLALFAASGALFGLVGLW
Ga0318508_101076613300031780SoilVAAIVATVLLLRWPRLHPLALFATCGALFGLAGLW
Ga0318552_1070638223300031782SoilAVLRVSPGGAAVWTAAVAATVLLLRWPQLHPLALFAIGGALFGLASLW
Ga0318529_1038451913300031792SoilGPAVWAATVVATVLLLRWPRVHPLALFATSGALFGATALW
Ga0318557_1010440513300031795SoilGGAAVWVAAIASTALILRWPGLHPLLLFVIGGVVFGLAEATGMW
Ga0318576_1015248333300031796SoilPGGPAVWAAAVIATVLLLRWPRLHPLALFAASGALFGVAALW
Ga0318550_1051213113300031797SoilSPGGAAVWMAALASTVLLLRWPQLHPLALFAAGGGLFGLAAVTGLW
Ga0318565_1038520623300031799SoilGGAAAWAAAIAATVLILRWPGLHPLTFFAAGGALFGCAAALGR
Ga0318568_1013995333300031819SoilAVLRISPGGPTVWAPAIIATVLLLRWPRLHPLALFATCGALFGLAGLW
Ga0318499_1030712313300031832SoilGAAVWLAAVAATVLLLRWSQLHPLALFAIGGALFGLAGLW
Ga0318511_1031781913300031845SoilLRVSPGGAAVWMAALASTVLLLRWPQLHPLALFAAGGGLFGL
Ga0318512_1028296133300031846SoilAAAVIATLLLLRWPRLHPLALFATSGALFGATALW
Ga0318544_1017613413300031880SoilPIAAGLILSGGVAVLRVSPGGAAVWTAAVAATVLLLRWPQLHPLALFAIGGALFGLAGLW
Ga0318551_1016587033300031896SoilLSGGIAVLRVSPGGAAVWLAAVAATVLLLRWSQLHPLALFAIGGALFGLAGLW
Ga0306921_10012731123300031912SoilAVLRVSPGGAAVWMAALASTVLLLRWPQLHPLALFAAGGGLFGLAAVTGLW
Ga0306921_1011734153300031912SoilLRVSPGGAAVWTAALASTVLLLRWPQLHPLALFAAGGGLFGLAAVTGLW
Ga0306921_1029400313300031912SoilGPAVWAAAVVATVLLLRWPRLHPLSLFATSGALFGLAALW
Ga0306921_1055520813300031912SoilVLRVSPGGPAVWVAAVIATVLLLRWPRLHPLVLFAASGALFGLVGLW
Ga0310912_1062735333300031941SoilGGAAVWMAAVAATVLLLRWPWLHPLALFAASGALFGLVGLW
Ga0310916_1076429923300031942SoilGAAIVATVVLLRWPRLNPLILFAISGALFGLAAAFGR
Ga0310913_1106477223300031945SoilVWAAAVIATVLLLRWPRLHPLALFAASGALFGIAALW
Ga0310909_1040501513300031947SoilVWAAAIIATVLLLRWPRLHPLALFATCGTLFGVAALW
Ga0306926_1110441233300031954SoilMAAVAATVLLLRWPWLHPLALFAASGALFGLVGLW
Ga0306922_1019716513300032001SoilWVAAGVGTVLLLRWPRLHPLALFVAGGALSGLTALW
Ga0318569_1015643113300032010SoilAAIASTALILRWPGLHPLLLFVIGGVVFGLAEATGMW
Ga0318545_1024039713300032042SoilRVSPGGPAVWAAAVIATVLLLRWPRLHPLALFAASGALFGIAALW
Ga0318558_1004481713300032044SoilVLRISPGGPTVWAPAIIATVLLLRWPRLHPLALFATCGALFGLAGLW
Ga0318532_1023320013300032051SoilGAAVWVAAIASTALILRWPGLHPLLLFVIGGVVFGLAEATGRW
Ga0318575_1011591213300032055SoilVWAAAVVATVLLLLWPRLHPLALFATSGALFGLAALW
Ga0318575_1023724913300032055SoilAPIAAGLILSGGVAVLRVSPGGAAVWMAAVAATVLLLRWPWLHPLALFATSGALFGLVGL
Ga0318575_1033587413300032055SoilPGGPAVWAAAVIATVLLLRWPRLHPLALFAASGALFGIAALW
Ga0318533_1136538023300032059SoilIAVLRVSPGGPAVWVAAVIATVLLLRWPRLHPLVLFAASGALFGLVGLW
Ga0318505_1003184113300032060SoilGIAGLRVSPGGAAVWLAAVAATVLLLRWSQLHPLALFAIGGALFGLAGLW
Ga0318504_1045487533300032063SoilSPGGPAVWAAAVIATVLLLRWPRLHPLALFAASGALFGMVALW
Ga0318510_1048628313300032064SoilMSGSMAVLRVSPGGAEVWVAALASTALLLCWPRLRPLALFAAGGGLFGLAAVTGLW
Ga0318513_1063977723300032065SoilAAIVATVVLLRWPRLNPLILFAISGALFGLAAAFGR
Ga0306924_1008352063300032076SoilLRVSPGGAAVWMAALASTVLLLRWPQLHPLALFAAGGGLFGLA
Ga0318525_1015850333300032089SoilGGPAVWAAAIIATVLLMRWPRLHPLVLFAAGGALFGLAGLW
Ga0306920_10032741213300032261SoilAPIAAGLIMSGGMAVLRVSPGGAEVWVAALASTALLLCWPRLRPLALFAAGGGLFGLAAVTGLW
Ga0306920_10392346913300032261SoilVAVLRVSPGGAAVWMAAVAATVLLLRWPWLHPLALFATSGALFGLVGLW
Ga0335079_1235978223300032783SoilISPGGPAVWAAAILATVLLLRWPRLHPLILFAAGGGLFGLTAGLGR
Ga0335080_1214161723300032828SoilLRASPGGAAVWAAAAITTALLLYRPRLHPLALFAASGAIFALAEEAGWW
Ga0318519_1028899713300033290SoilVWVAAIASTALILRWPGLHPLLLFVIGGVVFGLAEATGMW


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