Metagenome Family F096506

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096506
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	95 residues
Representative Sequence	MNRVQFVVLNLVGGACGLLIICDLVLGALNGRLNQSVAATRNQFGQAQQIQNTAQNLILRIAQVGQTDPALRELLAKHDFKVNLNTNSQTRPSP
Number of Associated Samples	66
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.37 %
% of genes near scaffold ends (potentially truncated)	33.65 %
% of genes from short scaffolds (< 2000 bps)	73.08 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.962 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (17.308 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (36.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.02% β-sheet: 0.00% Coil/Unstructured: 40.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13181	TPR_8	6.73
PF12704	MacB_PCD	6.73
PF13432	TPR_16	4.81
PF02643	DUF192	1.92
PF03916	NrfD	0.96
PF01882	DUF58	0.96
PF01381	HTH_3	0.96
PF13396	PLDc_N	0.96
PF01261	AP_endonuc_2	0.96
PF07963	N_methyl	0.96
PF16335	DUF4965	0.96
PF00830	Ribosomal_L28	0.96
PF01850	PIN	0.96
PF13732	DUF4162	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	1.92
COG0227	Ribosomal protein L28	Translation, ribosomal structure and biogenesis [J]	0.96
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.96 %
Unclassified	root	N/A	24.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.96 %
Unclassified	root	N/A	24.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.96 %
Unclassified	root	N/A	24.04 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	72.12 %
Unclassified	root	N/A	24.04 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	71.15 %
Unclassified	root	N/A	24.04 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	44.23 %
Unclassified	root	N/A	24.04 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	11.54 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	44.23 %
Unclassified	root	N/A	24.04 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	11.54 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	44.23 %
Unclassified	root	N/A	24.04 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	11.54 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	44.23 %
Unclassified	root	N/A	24.04 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	11.54 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	44.23 %
Unclassified	root	N/A	24.04 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	11.54 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100903898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300001213\|JGIcombinedJ13530_102836915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1138	Open in IMG/M
3300001213\|JGIcombinedJ13530_103635986	Not Available	702	Open in IMG/M
3300001213\|JGIcombinedJ13530_105158290	Not Available	666	Open in IMG/M
3300001213\|JGIcombinedJ13530_106105189	Not Available	621	Open in IMG/M
3300001213\|JGIcombinedJ13530_106492365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
3300001213\|JGIcombinedJ13530_106614593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300001213\|JGIcombinedJ13530_106765280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1159	Open in IMG/M
3300001213\|JGIcombinedJ13530_107601399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1626	Open in IMG/M
3300001213\|JGIcombinedJ13530_107841662	Not Available	504	Open in IMG/M
3300001213\|JGIcombinedJ13530_108993062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300001213\|JGIcombinedJ13530_109773815	Not Available	631	Open in IMG/M
3300001213\|JGIcombinedJ13530_110101733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300004152\|Ga0062386_101147452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300009131\|Ga0115027_10745779	Not Available	740	Open in IMG/M
3300009167\|Ga0113563_11074460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	930	Open in IMG/M
3300009167\|Ga0113563_13411448	Not Available	538	Open in IMG/M
3300009179\|Ga0115028_10827341	Not Available	724	Open in IMG/M
3300009179\|Ga0115028_10937407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	689	Open in IMG/M
3300009179\|Ga0115028_11147242	Not Available	636	Open in IMG/M
3300009179\|Ga0115028_11735261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300009502\|Ga0114951_10068390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2086	Open in IMG/M
3300009502\|Ga0114951_10285365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	853	Open in IMG/M
3300009630\|Ga0116114_1014648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2444	Open in IMG/M
3300009640\|Ga0116126_1053710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1567	Open in IMG/M
3300009644\|Ga0116121_1082312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1007	Open in IMG/M
3300009868\|Ga0130016_10000705	All Organisms → cellular organisms → Bacteria	146928	Open in IMG/M
3300010379\|Ga0136449_100345352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2678	Open in IMG/M
3300010379\|Ga0136449_101437443	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300012362\|Ga0137361_10903457	Not Available	801	Open in IMG/M
3300013088\|Ga0163200_1105463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10242668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1353	Open in IMG/M
(restricted) 3300013138\|Ga0172371_10011447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	11824	Open in IMG/M
3300014159\|Ga0181530_10025551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4355	Open in IMG/M
3300014164\|Ga0181532_10339910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300014491\|Ga0182014_10031546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4064	Open in IMG/M
3300014498\|Ga0182019_10060556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2219	Open in IMG/M
3300014502\|Ga0182021_10017097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	8608	Open in IMG/M
3300014502\|Ga0182021_10124770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2992	Open in IMG/M
3300014502\|Ga0182021_10404010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1621	Open in IMG/M
3300014502\|Ga0182021_13458267	Not Available	525	Open in IMG/M
3300014502\|Ga0182021_13690678	Not Available	508	Open in IMG/M
3300014839\|Ga0182027_11537989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300017946\|Ga0187879_10337423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300018003\|Ga0187876_1307702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300018008\|Ga0187888_1378290	Not Available	536	Open in IMG/M
3300018014\|Ga0187860_1003433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12488	Open in IMG/M
3300018022\|Ga0187864_10061770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2057	Open in IMG/M
3300018023\|Ga0187889_10381577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300018033\|Ga0187867_10476906	Not Available	687	Open in IMG/M
3300018040\|Ga0187862_10063973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2632	Open in IMG/M
3300018042\|Ga0187871_10360634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300019785\|Ga0182022_1296123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2501	Open in IMG/M
3300022553\|Ga0212124_10535797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300022555\|Ga0212088_10051326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4418	Open in IMG/M
3300023090\|Ga0224558_1008873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	6423	Open in IMG/M
3300023090\|Ga0224558_1056139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1570	Open in IMG/M
3300023091\|Ga0224559_1242800	Not Available	611	Open in IMG/M
3300025162\|Ga0209083_1176016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300025576\|Ga0208820_1028638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1715	Open in IMG/M
3300027854\|Ga0209517_10512887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300027896\|Ga0209777_10803782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	660	Open in IMG/M
3300027905\|Ga0209415_10047291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5632	Open in IMG/M
3300028556\|Ga0265337_1041657	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1320	Open in IMG/M
3300031232\|Ga0302323_103300783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300031834\|Ga0315290_10058828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3143	Open in IMG/M
3300031997\|Ga0315278_10399387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1419	Open in IMG/M
3300032164\|Ga0315283_10266914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1853	Open in IMG/M
3300032177\|Ga0315276_10545522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1246	Open in IMG/M
3300032256\|Ga0315271_10024494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4168	Open in IMG/M
3300032256\|Ga0315271_10092741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2280	Open in IMG/M
3300032275\|Ga0315270_10154556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1383	Open in IMG/M
3300032397\|Ga0315287_10359950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1721	Open in IMG/M
3300032397\|Ga0315287_10823472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1090	Open in IMG/M
3300032397\|Ga0315287_11622149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300032397\|Ga0315287_12642926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300032401\|Ga0315275_10323825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1726	Open in IMG/M
3300032516\|Ga0315273_11227658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	942	Open in IMG/M
3300032516\|Ga0315273_11807307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	735	Open in IMG/M
3300032805\|Ga0335078_11065305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	950	Open in IMG/M
3300032805\|Ga0335078_12110555	Not Available	598	Open in IMG/M
3300032892\|Ga0335081_11260049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300032893\|Ga0335069_10007000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	16311	Open in IMG/M
3300032897\|Ga0335071_10017357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7290	Open in IMG/M
3300032897\|Ga0335071_11075083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751	Open in IMG/M
3300033402\|Ga0326728_10000266	All Organisms → cellular organisms → Bacteria	212693	Open in IMG/M
3300033402\|Ga0326728_10165941	Not Available	2337	Open in IMG/M
3300033418\|Ga0316625_100584133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300033418\|Ga0316625_101705487	Not Available	607	Open in IMG/M
3300033418\|Ga0316625_102483226	Not Available	523	Open in IMG/M
3300033480\|Ga0316620_10803239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	903	Open in IMG/M
3300033482\|Ga0316627_101165645	Not Available	760	Open in IMG/M
3300033486\|Ga0316624_10796154	Not Available	840	Open in IMG/M
3300033488\|Ga0316621_10193156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1262	Open in IMG/M
3300033488\|Ga0316621_11258825	Not Available	561	Open in IMG/M
3300033521\|Ga0316616_100251371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1822	Open in IMG/M
3300033521\|Ga0316616_100428153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1481	Open in IMG/M
3300033521\|Ga0316616_101286556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	935	Open in IMG/M
3300033521\|Ga0316616_102702586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300033755\|Ga0371489_0001202	All Organisms → cellular organisms → Bacteria	41313	Open in IMG/M
3300033823\|Ga0334837_003398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9441	Open in IMG/M
3300033823\|Ga0334837_111395	Not Available	556	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	0.96%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.65%
Terrestrial	Environmental → Terrestrial	39.42%
Plants	Host-Associated → Plants	0.96%
Wastewater	Engineered → Wastewater	0.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.19%
Soil	Environmental → Terrestrial → Soil	30.77%
Marine	Environmental → Aquatic → Marine	13.46%
Peat	Environmental → Terrestrial → Peat	8.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.96%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	25.96%
Lake	Environmental → Aquatic → Freshwater → Lake	22.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.31%
Wetlands	Environmental → Aquatic → Marine → Wetlands	13.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.81%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	14.42%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	13.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.65%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	7.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.81%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	14.42%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	12.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.65%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	7.69%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.81%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.92%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.96%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300013088	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m	Environmental	Open in IMG/M
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental	Open in IMG/M
3300013138 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12m	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027995 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1009038981	3300001213	Wetland	MVLNLVGGACGLLVVCDLVLAQLNGRLNKSVVATRDQFNQAQQIQNTAQNLVVRVAQAGQTEPALRELLAKHDFKVNLNTNSQTRPSP*
JGIcombinedJ13530_1028369151	3300001213	Wetland	VSRIQFRALNLVGGACGLLILCDLGLALFIGRLNQSVATTRDQFNQAQQVQNTAQNLVVRVAKAGQTDPALRDLLAKHDFKVNLDTNTQAKPSP*
JGIcombinedJ13530_1036359862	3300001213	Wetland	MNKAQFSALNIVGAVCGVLIIGDVVLGMLNNRLNAQVSETQGQFNQAQQMQNTAQNLVVRIARDGQSVPALRELLARHDFKVNLNTNSPASTAP*
JGIcombinedJ13530_1051582902	3300001213	Wetland	VLNVVGGVCGLLILCDLGLALLNGRLNQSVAATQNRFNQAQQLQTTAQNLAVRVAQAGQTEPALRDLLARHDFNVNLSTNRQARPSP*
JGIcombinedJ13530_1061051891	3300001213	Wetland	VSRTQFILLNLVGGLCALLIVGDLVLGLLNGRLNQSVAANQSQFGQAQQVQNTAKNLVMRIAQSASGEPALRELLARHDFPLLTNTPAKASP*
JGIcombinedJ13530_1064923653	3300001213	Wetland	QTARPDLDTARVCPHSQNPVSRAQFIILNIVGGACSLLIISTLVLGMLNARLNQRVAAGQNQFGQAQQLQNTAQNLVIRVAQLGQSDAALRQLLEKHEFKVNLNTNSPAKANP*
JGIcombinedJ13530_1066145932	3300001213	Wetland	VNRTQYLALNVMGGACAVLILCDLGLGRLNSRLNQSVAATQAQFNQAQQLQNTAQNLVLRVARAGQSDAALRALLDKHDFKVNLNTNAQAKATP*
JGIcombinedJ13530_1067652801	3300001213	Wetland	MALNVVGGVCALLILCDVGLGLLNNRLNQSVLVTQNQLAQAQQIRNTAQNLVVRIAQAGQTDPALRDLLARHDFKVNLNTNTPAKPAP*
JGIcombinedJ13530_1076013993	3300001213	Wetland	VSRTQFILLNLVGGLCGLLIVGDLVLSIMNGRLNQSVVVNQNQFGQAQQVQTTAKNLVVRIAQSAEKEPALRELLAKHDFQLSTNKPAQPSP*
JGIcombinedJ13530_1078416622	3300001213	Wetland	NIVGAICGLLIIGDLALGVLNSRLNGQVSAMQTQFNQAQQIQNTAQNLVGRLAQASQIEPAVQELLVRHDIKPNVNTNTPAPTKP*
JGIcombinedJ13530_1089930622	3300001213	Wetland	VLILCDLGLGLLNGRLNQSVTATQAQFNQAQQLQNTAQNLVLRVARSGQTEAPLRALLEKHDFKVNVNTNAQTNPTP*
JGIcombinedJ13530_1097738151	3300001213	Wetland	LTFSRRGGAAAPLKFLDRGGGSGHSHAPMSRFQFIILNLVGGACGLLIVCDLVLAQLNGRVNQSVMTTRDQFGQAQQLQNTAQNLVVRVAQASQTDAVLRDLLAKHDFKVNLNTNTPAQPTP*
JGIcombinedJ13530_1101017332	3300001213	Wetland	MVLNLVGGACCLLIVCDLVLGYLNGRLNQSVVVTRDQFSQAQQIQNTAQNLVVRVAQAGQTERALRELLAKHDFKVNLNTNAQSRPSP*
Ga0062386_1011474521	3300004152	Bog Forest Soil	ARILPLTRAGIRRTLEAPISMNKTQFLALNVVGGVCGVLIACDLVLGMLNGRLNAEVGQTQGQFNQAQQIQGTAQNLIMRIAQAGQAEPALRALLTRHDFKVNLGTNAPTAPTP*
Ga0115027_107457791	3300009131	Wetland	ALNVVGGACGLLILCDLGLALLNGRLNQSVATTRDQFNQAQQIQNTAQNLVVRIARVGQTESALRDLLAKHDFRVNLDTNSPAKPSP*
Ga0113563_110744601	3300009167	Freshwater Wetlands	VNRTQFILLNLVGGACGLLIVGDLALGFLNVRLNRSVMVTQNQFGQARQVQNTAQNLVVRIAQAGQTDPALRELLLTHDFKVNLDTNTPTKPSP*
Ga0113563_134114482	3300009167	Freshwater Wetlands	IAGNVGHAQTVVSKTQFIALNVVGGLCGLLIVCDLVLGVLNGRLNQAVAANQNQFGQAQQVQATAQNLVRRIAQAGQTDPTLRELLPKHDFHLRTNTPAKPLP*
Ga0115028_108273412	3300009179	Wetland	VSRTQFIVLNIVGSVCGLLIVCDLVLGLLNSRLNQSVVANQNQFGQAQQVQATAQNLVRRIAQAGQTDPVLRELLPKHDIHLTTNPPAQPSP*
Ga0115028_109374071	3300009179	Wetland	LTSAAFLRIFNLLVNMNKAQFSALNIVGAVCGVLIIGDVVLGLLNGHLNAQVAETQRQFNQAQQMQNTAQNLVVRIARDGQADPALRELLARHD
Ga0115028_111472422	3300009179	Wetland	LNVVGGACGLLILSDLGLALLNGRLNQSVATTRDQFNQAQQVQNTAQNLVVRIARVGQTESALRDLLAKHDFKVNLDTNSPAKPSP*
Ga0115028_117352612	3300009179	Wetland	CGLLILCDLVLGLLNGRLNQAVAANQNQFGQAQQLQATAQNLVVRIAQAGQSDPALRELLAKHDFHLKTNTPAKPLP*
Ga0114951_100683903	3300009502	Freshwater	MVLNVAGGVCGLLIACDLTLGLLNGRLNQSATGTRDQFSQAQRVQETAQNLIVRVAQAGQADPALRDLLAKHDFKINLNTNSPAKPTP*
Ga0114951_102853651	3300009502	Freshwater	LAGGACGLLIVCDLVLGHLNGRLNRSVAATRDQFGQAQQMQNTAQNLVLRVAQAGQTERALRELLAKHDFQVNLNTNGQTKPSL*
Ga0118657_100757804	3300009506	Mangrove Sediment	VNRTQFIALNLMGGVCAVLILCDLGLSILNGRASQSVAATQAQFNQAQQLQNTAHNLILRVARAAESEAALRALMEKHEFKVNLNTNTQAKATP*
Ga0116114_10146482	3300009630	Peatland	MNRVQFVVLNLVGGACGLLIICDLVLGALNGRLNQSVAATRNQFGQAQQIQNTAQNLILRIAQVGQTDPALRELLAKHDFKVNLNTNSQTRPSP*
Ga0116126_10537103	3300009640	Peatland	MAGVCPHSQNLMSRVQFIVLNLVGGVCGLLIVCDLVLGHLTGSLNQSVMTTRNQFGQAQQIQSTAQNLVLRVAQAGQTDPALRELLAKHDFKVNLNTNSQTQPSP*
Ga0116121_10823123	3300009644	Peatland	VGGVCGLLIVCDLVLGSLNGRLNQSALATQNQFNQARQVQTTAQNLVMRVAQVGQSEPALRELLAKHDFKVNLNTNSQPRTTP*
Ga0130016_10000705101	3300009868	Wastewater	MNKAQFSALNIVGAVCGALIIGDVVLGMLNNRLNSQVSETQGQYNQAQQIQNTAQNLVVRIARDGQSDPALRELLVRHDFQVSLNTNRPASATP*
Ga0136449_1003453523	3300010379	Peatlands Soil	MSLNVVGGVCGVLIVCDVVLGYLDGRLNQSVGATRNQFGQAQQVQNTAQNLIVRIAQAGQTDPVLRDLLARHDFKVNLNTNSPAKPSP*
Ga0136449_1014374432	3300010379	Peatlands Soil	MNKTQYSALNVVGGACGLLILCDLALAMLNGRVNKTVVETQNQFTQARQIQNTAQNLVVRIAQAGQSDRALRELLAKHDFKINLTTNNPTQPTP*
Ga0137361_109034571	3300012362	Vadose Zone Soil	MTRTQFWTLNLAGGACGLLIGCDVVLAQLNSHLNQAVVATQKQFNQAQQLQNTAQNLVTRIAQAGQHEAALRELLAKHYPNVNLSTNEPPK
Ga0163200_11054632	3300013088	Freshwater	MARFSPHSQNLMSRAQFMVLNVVGGACGLLIVCDLVLGHLNGRLNQSVLATRNQFGQAQQVQNTAQNLVMRIAQAGQTDPGLRELLVRHDFKVNLDTNGQTRPSP*
(restricted) Ga0172375_102426681	3300013137	Freshwater	MNKAQFLALNLVGAVCGVLIIGDVVLGILNGRLNAQVAATQSQFNQAQQMQDTAQNLVLRIARGGQADPALRELLARHDFKVNLNTNSPNPATP*
(restricted) Ga0172371_1001144710	3300013138	Freshwater	MNKAQFLALNLVGAVCGVLIIGDVVLGILNGRLNAQVAATQSQFNQAQQMQNTAQNLVVRIARDGQADPSLRELLARHDFKVNLNTNSPNPATP*
Ga0181530_100255515	3300014159	Bog	MNKAQFSALNLVGAVCGLLIACDVVLGILNGRLNAEVGQTQGQFNQAQQIQNTAQGLVMRIAQAGRADPALRALLARQDFNVNLATNASTTPTP*
Ga0181532_103399101	3300014164	Bog	MNKTQFLALNVVGGVCGLLIACDLVLGMLNGRLNAEVGQTQGQFNQAQQIQNTAQNLIMRIAQAGQGEPALRELLARHDFKINQGTNAPAAPTP*
Ga0182014_100315462	3300014491	Bog	LVGGACGLLIVCDLVLGHFNGRLNKTVAATRDQFGQAQQMQNTAQNLVMRVAQAGQSEPALRELLAKHDFKVNLNTNNQTRPSP*
Ga0182019_100605562	3300014498	Fen	MNKSQFLALNIVGGICGLLIICDLVLGILNSRLNAQVAQTQAQFNQAQQIHNTAQNLVVRIAQASQTDPALQALLVQHDFKVNLNTNNPAPATP*
Ga0182021_100170975	3300014502	Fen	MNKAQFSALNIVGGICGLLIICDLVLGVLNGRLNAQVAQTQAQFNQAQQIHNTAQNLVVRIAQASQTDPVLRDLLVRHDFKVSPNTNNPAPATP*
Ga0182021_101247701	3300014502	Fen	MNKSQFLALNIVGGICGLLIICDLVLGMLNSRLNAQVAQTQAQFNQAQQIHNTAQNLVVRIAQASQTDPALRALLVQHDFKVNLNTNNPAPATP*
Ga0182021_104040103	3300014502	Fen	MAGISPHSQNLMSRVQFMVLNLVGGACGLLIVCDLVLGELNGRLNKSVATTRDQFSQAQQIQNTAQNLVLRVAQAGQTDPALRELLVKHDFKVNLNTNSQTRPSP*
Ga0182021_134582672	3300014502	Fen	VGGACALLILCNVVLARLNGRLNQSVAQTQSQFNQAQQIQNTAQNLVLRVAQAAQTDPALRGLLAKHDFNVNLKTNSEVRPAP*
Ga0182021_136906781	3300014502	Fen	MNKAQFSALNFVGGACALLILCNLVLAWLNGRLNQSVAQTQSQFNQAQQVQTTAQNLVLRVAQSGQSDPALRGLLAKHDFNVNLNTNSHVRPAR*
Ga0182027_115379893	3300014839	Fen	IVCDLVLGQLNGRLNQSVMATRNQFGQAQQVQNTAQNLIMRVAQAGQTDPALRELLAKHDFKVNLNTNSQTRLSP*
Ga0187879_103374233	3300017946	Peatland	VNKVQFIVLNIVGGVCGLLIVCDLVLGSLNGRLNQSALATQNQFNQARQVQTTAQNLVMRVAQVGQSEPALRELLAKHDFKVNLNTNSQPRTTP
Ga0187876_13077022	3300018003	Peatland	MAGVCPHSQNLMSRVQFIVLNLVGGVCGLLIVCDLVLGHLTGSLNQSVMTTRNQFGQAQQIQSTAQNLVLRVAQAGQTDPALRELLAKHDFKVNLNTNSQTQPSP
Ga0187888_13782901	3300018008	Peatland	MNKVQFIVLNLVGGVCGLLIVCDLVLGALNGRLNQSVAATRNQFGQAQQIQNTAQNLVVRIAQAGQNDRALRELLAKHDFKVNLNTNAPTQSAP
Ga0187860_100343313	3300018014	Peatland	MNRVQFVVLNLVGGACGLLIICDLVLGALNGRLNQSVAATRNQFGQAQQIQNTAQNLILRIAQVGQTDPALRELLAKHDFKVNLNTNSQTRPSP
Ga0187864_100617702	3300018022	Peatland	MNRVQFVVLNLVGGACGLLIICDLVLGALNGRLNQSVAATRNQFGQAQQIQNTAQNLILRIAQVGQTDPALRELLAKHDFKVNLNTNSHTRPSP
Ga0187889_103815771	3300018023	Peatland	LDMTRVSPHSQNPMNRVQFVVLNLVGGACGLLIICDLVLGALNGRLNQSVAATRNQFGQAQQIQNTAQNLILRIAQVGQTDPALRELLAKHDFKVNLNTNSQTRPSP
Ga0187867_104769061	3300018033	Peatland	MNKVQFIVLNLVGGVCGLLIVCDLVLGALNGRLNQSALATQNQFNQARQIQTTAQNLVMRVAQAGQSEPALRELLAKHDFKVNLNTNSQTQPSP
Ga0187862_100639734	3300018040	Peatland	MTRVSPHSQNPMNRVQFVVLNLVGGACGLLIICDLVLGALNGRLNQSVAATRNQFGQAQQIQNTAQNLILRIAQVGQTDPALRELLAKHDFKVNLNTNSQTRPSP
Ga0187871_103606341	3300018042	Peatland	MSKVQFMVLNVVGCACGLLIVCDLVLGVFNGRLNQSVALTRNQFGQAQQIQTTAQNLVVRVAQAGQTDPALRELLAKHDFKVNLNTNSQSRTSP
Ga0182022_12961233	3300019785	Fen	VCDLVLSQFNGRLNQSVVATRNQFGQAQQVQNTAQNLVGRMAQAGQTDPALRDLLAKHDFKINLNTNSQTQPLP
Ga0212124_105357972	3300022553	Freshwater	QRPLRPLDMARFSPHSQNLMSRAQFMVLNVVGGACGLLIVCDLVLGHLNGRLNQSVLATRNQFGQAQQVQNTAQNLVMRIAQAGQTDPGLRELLVRHDFKVNLDTNGQTRPSP
Ga0212088_100513266	3300022555	Freshwater Lake Hypolimnion	MVLNVAGGVCGLLIACDLTLGLLNGRLNQSATGTRDQFSQAQRVQETAQNLIVRVAQAGQADPALRDLLAKHDFKINLNTNSPAKPTP
Ga0224558_10088737	3300023090	Soil	VAAVTRCTPPFTRAIHTLDTAEVFPHSQKPMSRVQFIILNLVGGACGLLIVCDLVLGHFNGRLNKTVAATRDQFGQAQQMQNTAQNLVMRVAQAGQSEPALRELLAKHDFKVNLNTNNQTRPSP
Ga0224558_10561392	3300023090	Soil	MNKTQFLALNIVGGVCGVLIACDLVLGMLNGRLNAEVGQTQGQFNQAQQIQGTAQNLIMRIAQAGQVEPALRELLVRHDFKINQGTNAPAAPTP
Ga0224559_12428002	3300023091	Soil	MVLNLVGGVCGLLIIGDLVLAHLNGGVNKTVMATRDQFGQAQQIQNTAQNLVLRVAQAGQTEPALRELLAKHDFKINLNTNSQTRPLP
Ga0209083_11760163	3300025162	Freshwater	NLAGGACGLLIVCDLVLGHLNGRLNRSVAATRDQFGQAQQMQNTAQNLVLRVAQAGQTERALRELLAKHDFQVNLNTNGQTKPSL
Ga0208820_10286383	3300025576	Peatland	LRRLDMAGVCPHSQNLMSRVQFIVLNLVGGVCGLLIVCDLVLGHLTGSLNQSVMTTRNQFGQAQQIQSTAQNLVLRVAQAGQTDPALRELLAKHDFKVNLNTNSQTQPSP
Ga0209517_105128871	3300027854	Peatlands Soil	AWISPHSQGSVSRIQFMSLNVVGGVCGVLIVCDVVLGYLDGRLNQSVGATRNQFGQAQQVQNTAQNLIVRIAQAGQTDPVLRDLLARHDFKVNLNTNSPAKPSP
Ga0209777_108037822	3300027896	Freshwater Lake Sediment	LGCQEAPLQPLDRARILPHTQTPVSKAQFIVLNLVGTACGLLIGGDLVLGQLNERLNQSVAVTRNQFSQAQQLQTTAQNLALRVAQAGQTDPVLRELLAKHDFKVNFNTNSQTRPSP
Ga0209415_100472915	3300027905	Peatlands Soil	MSLNVVGGVCGVLIVCDVVLGYLDGRLNQSVGATRNQFGQAQQVQNTAQNLIVRIAQAGQTDPVLRDLLARHDFKVNLNTNSPAKPSP
(restricted) Ga0233418_102978282	3300027995	Sediment	MSRTEFLILNVAGGACAALIGCDLVLGQLNQRLNQSVAATQSQLNQAQQLHQTTRNLVLRIAQDGQKDEALRQLLARHDFKVDLGGAGQAQPS
Ga0265337_10416572	3300028556	Rhizosphere	MVLNLVGGICGLLIAGDLLLGLLNGRLSQSAEATRDQFSQAQRVQETAQKLVMRVAKAGQSDPVLRDLLANHDFRITANTNRQNKPTP
Ga0302323_1033007831	3300031232	Fen	APGRGACASSKPLRPLRLDMAGISPHSQNPMSRAQFMVLNLVGGACGLLIVCDLVLGGFNGRLNRSVAATRDQFTQAQQIHTTAQNLLVRVAQAGQTEPALRELLVKHDFKVNFNTNNPPRPSP
Ga0315290_100588284	3300031834	Sediment	MQLVVLNVVGGACGLLIVCDLVLGQFNGRLNQSVLAMRNQIGQAQQIQNTAQNLVMRIAQAGQTDPALRELLVQHDFKVNQNTNSQNQPSP
Ga0315278_103993872	3300031997	Sediment	MNKTHFSTLNFVGGACALLILCNLVLAQLNGRLNRSVLETQSQFNQAQQIQNTAQNLVVRVAQAGQTDPALRGLLAKHDFNVNLNTNSQVRPAP
Ga0315283_102669143	3300032164	Sediment	MARFSPHSQNLMSRAQFMVLNVVGGACGLLIVCDLVLGHLNGRLNQSVLATRNQFGQAQQIQNTAQNLVMRLAQAGQTDPALRDLLVRHDFNINLNTNSQTQPSP
Ga0315276_105455223	3300032177	Sediment	VNESRGESRGESQGASALHGSSKPLDMARVSPHSQNPVNKMQLVVLNVVGGACGLLIVCDLVLGQFNGRLNQSVLAMRNQIGQAQQIQNTAQNLVMRIAQAGQTDPALRELLVQHDFKVNQNTNSQNQPSP
Ga0315271_100244942	3300032256	Sediment	MGLNLVGGACGLLIVCDLVLAQLNGRLSQSVMATRDQFNQAQQIQNTAQNLVVRVAQTGQTDPALRELLVKHDFKVNLNTNSQTRPSP
Ga0315271_100927411	3300032256	Sediment	GASALHGSSKPLDMARVSPHSQNPVNKMQLVVLNVVGGACGLLIVCDLVLGQFNGRLNQSVLAMRNQIGQAQQIQNTAQNLVMRIAQAGQTDPALRELLVQHDFKVNQNTNSQNQPSP
Ga0315270_101545561	3300032275	Sediment	MRIATRIVDTLDTANVSPHSQNLMSQVHFMGLNLVGGACGLLIVCDLVLAQLNGRLSQSVMATRDQFNQAQQIQNTAQNLVVRVAQTGQTDPALRELLVKHDFKVNLNTNSQTRPSP
Ga0315287_103599501	3300032397	Sediment	VHSRNPVNKTQLIVLNLAGGACGLLIVCDLVLGHFNGALNQSVLATRNQFGQAQQIQNTAQNLVMRLAQAGQTDPALRDLLVRHDFNINLNTNSQTQPSP
Ga0315287_108234721	3300032397	Sediment	QLVVLNVVGGACGLLIVCDLVLGQFNGRLNQSVLAMRNQIGQAQQIQNTAQNLVMRIAQAGQTDPALRELLVQHDFKVNQNTNSQNQPSP
Ga0315287_116221493	3300032397	Sediment	LRTLSPQVTMNKAQFSTLNLVGGACALLILCNLVLAQLNGRLNRSVLETQRQFNQAQQIQTTAQNLVLRVAQAGQSDPALRGLLAKHDFNVNLNTNSQVRPAP
Ga0315287_126429262	3300032397	Sediment	NLMSRAQFMVLNVVGGACGLLIVCDLVLGHLNGRLNQSVLATRNQFGQAQQVQNTAQNLVMRIAQAGQTDPGLRELLVRHDFKVNLNTNSQTQPSP
Ga0315275_103238253	3300032401	Sediment	MARVSPHSQNPVNKMQLVVLNVVGGACGLLIVCDLVLGQFNGRLNQSVLAMRNQIGQAQQIQNTAQNLVMRIAQAGQTDPALRELLVQHDFKVNQNTNSQNQPSP
Ga0315273_112276582	3300032516	Sediment	MQFMALNVVGGLCGLLILCDLGLALANGRLNQSVAANQAQLGQAQQVQTTLQNLVLRVGQAGQTDPALRDLLAKHDFKVNLNTNSPARPAP
Ga0315273_118073071	3300032516	Sediment	MVLNVVGGACGLLIVCDLVLGHLNGRLNQSVLATRNQFGQAQQVQNTAQNLVMRIAQAGQTDPGLRELLVRHDFKVNLNTNSQTQPSP
Ga0335078_110653053	3300032805	Soil	MTKAQFTALNVVGAVCGVLIACNIVLGVLNARLNTQVGFTQGQFNQAQQIQTTAQNLVVRVAQASQTEPALRALLAKHEFKVNLTTNPPARTAP
Ga0335078_121105552	3300032805	Soil	RPSLTPAAILRTLTAPISMNRTQFITLNVVGGLCALLIAADVALGIWNGQLNSEVGRTQGQFNQAQQLQNTAQNLVVRIAQAGQTDDALRGLLERHDFKINMGTNAPSPAAR
Ga0335081_112600491	3300032892	Soil	RRPVSRVQFVTLNLVGTACSVLIICDLVLGHLNGRLNQSVGVTRNQFGQAQQLQNTAQTLIMRIAQAGQTEPVLRDLLARHDFKINLNTNTAAKPTP
Ga0335069_1000700010	3300032893	Soil	MNKTQFIALNAVGVLCGLLIASDLVLGILNGQLNSEVGRTQGQFNQAQQLQNTAQNLVVRIAQAGQTDDALRGLLERHDFKINMGTNAPSPAAR
Ga0335071_100173571	3300032897	Soil	MWGASSVTPIDTAWVSPHSHCPVSRIQFVTLNVVGGACSLLIICDLILGQLNGGLNQSVSATRNQFGQAQQVQNTAQNLIVRIAQVGQSEPALRDLLARHDFKVNLNTNNPARPTP
Ga0335071_110750832	3300032897	Soil	NRTQFITLNVVGGLCALLIAADVALGIWNGQLNSEVGRTQGQFNQAQQLQNTAQNLVVRIAQAGQTDDALRGLLERHDFKINMGTNAPSPAAR
Ga0326728_10000266180	3300033402	Peat Soil	MRQSGRISLPRVPPESYRIPPLTLAGILRILEAPINMSKAQFLALNVVGGVCGLLIACDLVLGMLNGRLNAEVGQTQGQFNQAQQIQGTAQNLIMRIAQAGQVEPALRELLVRHDFKINQGTNAPAAPIP
Ga0326728_101659412	3300033402	Peat Soil	MSRAQFIVLNLVGGACGLLIVCVVVLGYFNARLNQSVLVTRNQFSQAQQVQNTAQNLVLRIAQAGQADPALRELLEKHKFQVNQNTNTQTRPSP
Ga0316625_1005841333	3300033418	Soil	VSRTQFIVLNIVGSVCGLLIVCDLVLGLLNSRLNQSVVANQNQFGQAQQVQATAQNLVRRIAQAGQTDPVLRELLPKHDIHLTTNPPAQPSP
Ga0316625_1017054871	3300033418	Soil	VSRTQFILLNLVGGLCGLLIVGDLVLGLLNGRLSQSVAANQNQFGQAQQVQTTAKNLVVRIAQSAEQEPALRELLAKHDFQLSTNKPAQPSP
Ga0316625_1024832262	3300033418	Soil	QFMTLNLVGGLCGLLIVCDLALGLLNGRLNQAVAANQNQFGQAQQIQATAQNLVVRIAQAGQNDPALRELLTKHDFHFKTNTPAKPSP
Ga0316620_108032391	3300033480	Soil	LLIVCDLVLGLLNGRLNQAVAANQNQFGQAQQVQATAQNLVQRMAQAGQTDPTLRDLLLKHDFHLKTNTPAKPSS
Ga0316627_1011656451	3300033482	Soil	NLVGGLCGLLIVGDLVLGLLNGRLSQSVAANQNQFGQAQQVQTTAKNLVVRIAQSAEQEPALRELLAKHDFQLSTNKPAQASP
Ga0316624_107961541	3300033486	Soil	VTRTQFIALNIVGSLCGLLIVCDLALGLLNGRLNQSVAANQNQFGQAQQVQATAQNLVRRIAQAGQADPVLRDLLPKHDIHYGTNSPTRSSP
Ga0316621_101931561	3300033488	Soil	INKAQFSALNIVGGICGLLIIYDLVLGMLNSRLNARVAQTQAQFNQAQQIHNTAQNLVVRIAQASQTDPALRELLDRHDFKVNPNTNNPAPATP
Ga0316621_112588251	3300033488	Soil	LLIVGDLVLGLLNGRLSQSVAANQNQFGQAQQVQTTAKNLVVRIAQSAEQEPALRELLAKHDFQLSTNKPAQASP
Ga0316616_1002513713	3300033521	Soil	VSKTQFIALNVVGGLCGLLIVCDLVLGVLNGRLNQAVAANQNQFGQAQQVQATAQNLVRRIAQAGQTDPTLRELLPKHDFHLRTNTPAKPLP
Ga0316616_1004281531	3300033521	Soil	LSQSVAANQNQFGQAQQVQTTAKNLVVRIAQSAEQEPALRELLAKHDFQLSTNKPAQASP
Ga0316616_1012865563	3300033521	Soil	DLVLGLLNSRLNQSVVANQNQFGQAQQVQATAQNLVRRIAQAGQTDPVLRELLPKHDIHLTTNPPAQPSP
Ga0316616_1027025862	3300033521	Soil	DLDTARVCPHSQNPVSRAQFIILNIVGGACSLLIISTLVLGMLNARLNQRVAAGQNQFGQAQQLQNTAQNLVIRVAQLGQSDAALRQLLEKHEFKVNLNTNGPAKANP
Ga0371489_0001202_39238_39567	3300033755	Peat Soil	LTLAGILRILEAPINMSKAQFLALNVVGGVCGLLIACDLVLGMLNGRLNAEVGQTQGQFNQAQQIQGTAQNLIMRIAQAGQVEPALRELLVRHDFKINQGTNAPAAPIP
Ga0334837_003398_5329_5658	3300033823	Soil	LTLAGILRILEAPISMNKTQFLALNIVGGVCGVLIACDLVLGMLNGRLNAEVGQTQGQFNQAQQIQGTAQNLIMRIAQAGQVEPALRELLVRHDFKINQGTNAPAAPTP
Ga0334837_111395_154_408	3300033823	Soil	LVGGACGLLIVCDLVLGHFNGRLNKTVAATRDQFGQAQQMQNTAQNLVMRVAQAGQSEPALRELLAKHDFKVNLNTNNQTRPSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters