NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096430

Metagenome / Metatranscriptome Family F096430

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096430
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 77 residues
Representative Sequence MDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKGE
Number of Associated Samples 63
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 18.81 %
% of genes near scaffold ends (potentially truncated) 45.19 %
% of genes from short scaffolds (< 2000 bps) 82.69 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(47.115 % of family members)
Environment Ontology (ENVO) Unclassified
(77.885 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.885 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.97%    β-sheet: 0.00%    Coil/Unstructured: 41.03%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF13586DDE_Tnp_1_2 3.85
PF14417MEDS 2.88
PF07883Cupin_2 1.92
PF02627CMD 1.92
PF00582Usp 1.92
PF02371Transposase_20 1.92
PF00239Resolvase 0.96
PF08818DUF1801 0.96
PF00583Acetyltransf_1 0.96
PF09509Hypoth_Ymh 0.96
PF02922CBM_48 0.96
PF13411MerR_1 0.96
PF02518HATPase_c 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 1.92
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 1.92
COG3547TransposaseMobilome: prophages, transposons [X] 1.92
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.96
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.96
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.96
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.96
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.00 %
All OrganismsrootAll Organisms25.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005332|Ga0066388_100401366All Organisms → cellular organisms → Bacteria → Acidobacteria2016Open in IMG/M
3300005363|Ga0008090_14770788Not Available734Open in IMG/M
3300005764|Ga0066903_106066962Not Available633Open in IMG/M
3300005764|Ga0066903_106941689Not Available588Open in IMG/M
3300009792|Ga0126374_10005182All Organisms → cellular organisms → Bacteria4555Open in IMG/M
3300010046|Ga0126384_12030092Not Available550Open in IMG/M
3300010048|Ga0126373_10035617All Organisms → cellular organisms → Bacteria4338Open in IMG/M
3300010048|Ga0126373_10168460All Organisms → cellular organisms → Bacteria2098Open in IMG/M
3300010048|Ga0126373_10312539All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae1571Open in IMG/M
3300010048|Ga0126373_12184067Not Available615Open in IMG/M
3300010358|Ga0126370_12050931Not Available560Open in IMG/M
3300010359|Ga0126376_10526256Not Available1101Open in IMG/M
3300010360|Ga0126372_10026006All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3570Open in IMG/M
3300010376|Ga0126381_100629338All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae1529Open in IMG/M
3300010376|Ga0126381_101189979All Organisms → cellular organisms → Bacteria → Acidobacteria1101Open in IMG/M
3300010398|Ga0126383_10335520Not Available1526Open in IMG/M
3300012971|Ga0126369_10412552Not Available1391Open in IMG/M
3300012971|Ga0126369_13167701Not Available539Open in IMG/M
3300016294|Ga0182041_11266389Not Available674Open in IMG/M
3300016319|Ga0182033_10415440Not Available1140Open in IMG/M
3300016319|Ga0182033_10853143Not Available805Open in IMG/M
3300016341|Ga0182035_10395246Not Available1160Open in IMG/M
3300016371|Ga0182034_10221526Not Available1475Open in IMG/M
3300016371|Ga0182034_10289813Not Available1308Open in IMG/M
3300016371|Ga0182034_10373899All Organisms → cellular organisms → Bacteria1163Open in IMG/M
3300016371|Ga0182034_11771251Not Available544Open in IMG/M
3300016387|Ga0182040_10422143All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300016387|Ga0182040_11026629Not Available688Open in IMG/M
3300016404|Ga0182037_11392711Not Available620Open in IMG/M
3300016422|Ga0182039_10104273All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2102Open in IMG/M
3300016445|Ga0182038_10425266Not Available1119Open in IMG/M
3300016445|Ga0182038_10912369Not Available774Open in IMG/M
3300021560|Ga0126371_13249143Not Available550Open in IMG/M
3300026865|Ga0207746_1023354Not Available509Open in IMG/M
3300026928|Ga0207779_1011928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1194Open in IMG/M
3300026942|Ga0207783_1023847Not Available604Open in IMG/M
3300031543|Ga0318516_10386596Not Available807Open in IMG/M
3300031543|Ga0318516_10413236Not Available777Open in IMG/M
3300031544|Ga0318534_10819031Not Available523Open in IMG/M
3300031545|Ga0318541_10040624Not Available2352Open in IMG/M
3300031546|Ga0318538_10729224Not Available538Open in IMG/M
3300031572|Ga0318515_10443905Not Available694Open in IMG/M
3300031573|Ga0310915_10003977All Organisms → cellular organisms → Bacteria8054Open in IMG/M
3300031573|Ga0310915_10058538Not Available2509Open in IMG/M
3300031573|Ga0310915_10105365Not Available1910Open in IMG/M
3300031573|Ga0310915_10858710Not Available637Open in IMG/M
3300031679|Ga0318561_10706738Not Available554Open in IMG/M
3300031680|Ga0318574_10202980Not Available1139Open in IMG/M
3300031719|Ga0306917_10206711Not Available1488Open in IMG/M
3300031719|Ga0306917_10766619Not Available757Open in IMG/M
3300031719|Ga0306917_10813800Not Available732Open in IMG/M
3300031719|Ga0306917_11053019Not Available634Open in IMG/M
3300031736|Ga0318501_10831214Not Available512Open in IMG/M
3300031744|Ga0306918_10424763Not Available1037Open in IMG/M
3300031748|Ga0318492_10056482All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis1846Open in IMG/M
3300031768|Ga0318509_10561129Not Available637Open in IMG/M
3300031771|Ga0318546_10077491Not Available2137Open in IMG/M
3300031777|Ga0318543_10575559Not Available505Open in IMG/M
3300031792|Ga0318529_10318170Not Available724Open in IMG/M
3300031796|Ga0318576_10254187Not Available829Open in IMG/M
3300031819|Ga0318568_10963642Not Available527Open in IMG/M
3300031833|Ga0310917_10132962All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1629Open in IMG/M
3300031833|Ga0310917_10866579Not Available608Open in IMG/M
3300031833|Ga0310917_11090682Not Available533Open in IMG/M
3300031879|Ga0306919_10320057Not Available1180Open in IMG/M
3300031880|Ga0318544_10202793Not Available766Open in IMG/M
3300031910|Ga0306923_10312249All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1796Open in IMG/M
3300031910|Ga0306923_10520087All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1344Open in IMG/M
3300031910|Ga0306923_11302493Not Available770Open in IMG/M
3300031910|Ga0306923_11364763Not Available748Open in IMG/M
3300031910|Ga0306923_12424436Not Available519Open in IMG/M
3300031912|Ga0306921_10037518All Organisms → cellular organisms → Bacteria → Acidobacteria5452Open in IMG/M
3300031912|Ga0306921_10280370Not Available1952Open in IMG/M
3300031912|Ga0306921_11691209Not Available684Open in IMG/M
3300031941|Ga0310912_10221696Not Available1450Open in IMG/M
3300031941|Ga0310912_10376869Not Available1103Open in IMG/M
3300031942|Ga0310916_10254871All Organisms → cellular organisms → Bacteria → Acidobacteria1479Open in IMG/M
3300031942|Ga0310916_10830340Not Available777Open in IMG/M
3300031942|Ga0310916_10971855Not Available709Open in IMG/M
3300031945|Ga0310913_10290797All Organisms → cellular organisms → Bacteria1151Open in IMG/M
3300031945|Ga0310913_10370013Not Available1015Open in IMG/M
3300031945|Ga0310913_10421279Not Available947Open in IMG/M
3300031946|Ga0310910_10121644All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis1965Open in IMG/M
3300031946|Ga0310910_10186252Not Available1605Open in IMG/M
3300031947|Ga0310909_11555315Not Available525Open in IMG/M
3300032035|Ga0310911_10126670All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis1422Open in IMG/M
3300032035|Ga0310911_10262751Not Available989Open in IMG/M
3300032044|Ga0318558_10201620Not Available971Open in IMG/M
3300032052|Ga0318506_10016697All Organisms → cellular organisms → Bacteria → Acidobacteria2605Open in IMG/M
3300032055|Ga0318575_10641631Not Available538Open in IMG/M
3300032055|Ga0318575_10675172Not Available523Open in IMG/M
3300032059|Ga0318533_10795038Not Available694Open in IMG/M
3300032076|Ga0306924_11358499Not Available760Open in IMG/M
3300032091|Ga0318577_10485377Not Available589Open in IMG/M
3300032261|Ga0306920_100015425All Organisms → cellular organisms → Bacteria → Acidobacteria10472Open in IMG/M
3300032261|Ga0306920_100359735All Organisms → cellular organisms → Bacteria → Acidobacteria2165Open in IMG/M
3300033289|Ga0310914_10089212All Organisms → cellular organisms → Bacteria2630Open in IMG/M
3300033289|Ga0310914_10490616Not Available1111Open in IMG/M
3300033289|Ga0310914_11111215Not Available691Open in IMG/M
3300033289|Ga0310914_11209408Not Available657Open in IMG/M
3300033290|Ga0318519_10560556Not Available692Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil47.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil15.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.77%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300026865Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)EnvironmentalOpen in IMG/M
3300026928Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)EnvironmentalOpen in IMG/M
3300026942Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066388_10040136623300005332Tropical Forest SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE*
Ga0008090_1477078813300005363Tropical Rainforest SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG*
Ga0066903_10606696213300005764Tropical Forest SoilMDLKYPQWQEPLAAAILEFNRDLLREKVQKAEEAIAHRIEQLAFDHGNLHERPALFDGLDLLRSVKKDRLGIPEAKSK*
Ga0066903_10694168913300005764Tropical Forest SoilDLKYPQWQEPLAAAILEFNRDLLREKAQRADEAISQRIEQLAFDLGNERERRLLFDGLDLLRSVRKERLGIPEAKGE*
Ga0126374_1000518263300009792Tropical Forest SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFDGLDLLRSVKNRLGIPEGKGEASRQAEGVCRCW*
Ga0126384_1203009213300010046Tropical Forest SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFDGLDLLRSVKNRLGIPEGKGEASRQAEGV*
Ga0126373_1003561733300010048Tropical Forest SoilMELKYPQWQEPLASAILEFNREQLREKVEKAEKAIAQRIEQLAFDHGNEHERRALFDALDLLRSVKKDRLGIPEAKSE*
Ga0126373_1016846033300010048Tropical Forest SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKGE*
Ga0126373_1031253923300010048Tropical Forest SoilMELKYPQWQEPLASAILEFNRKQLREKIQKAEEAIAQRIDQLAFDHGNEHERRALFDGLDPPERKKRSARHSRAKSE*
Ga0126373_1218406713300010048Tropical Forest SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFDGLDLLRSVKSRLGIPEGKGEASRRRKEFDYPLLVIQSLRCA*
Ga0126373_1219572713300010048Tropical Forest SoilEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE*
Ga0126370_1205093113300010358Tropical Forest SoilWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE*
Ga0126376_1052625623300010359Tropical Forest SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFDGLDLLRSVKSRLGIPEGKGEASRQAEGVCRCW*
Ga0126372_1002600653300010360Tropical Forest SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPSNEHERRALLDGLDLLRSVKNRLGIPEGKGEASRQAEGV*
Ga0126381_10062933843300010376Tropical Forest SoilMELKYPQWQEPLASAILEFNRKQLREKIQKAEEAIAQRIDQLAFDHGNEHERRALFDGLDPPERKKNRLDIPEAKSE*
Ga0126381_10118997933300010376Tropical Forest SoilAMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKGE*
Ga0126383_1033552023300010398Tropical Forest SoilMDLKYPQWQEPLAEAICEFNSEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE*
Ga0126369_1041255223300012971Tropical Forest SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAKEAITQRIEQLTFDPSNEHERRALFDGLDLLRSVKSRLGIPEGKGEASRQAEGV*
Ga0126369_1316770123300012971Tropical Forest SoilMSLQLKYPRWQELLAAAILEFNRDLLREKAQRADEAISQRIEQLAFDLGNERERRLLFDGLDLLRSVRKKRLGIPEAKGE*
Ga0182041_1126638923300016294SoilMELKYPQWQEPLASAILEFNHEQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRRVK
Ga0182033_1041544023300016319SoilQEPLASAILEFNREQLREKVQKAEEAITQRIEQLAFDPGTEHERRALFDGLDLLRSVKNRLGIPGGKGEASRQAEGV
Ga0182033_1085314323300016319SoilMDLKYPQWQEPLAEAILEFDPQQVREKVQRAEEAIVRRIEELAFDPRNGRERQALVDGLELLRIAKKDRLGIPRSKGE
Ga0182035_1039524633300016341SoilMDLKYPQWQEPLAEAILEFDPQQVREKVQRAEEAIVRRIEELAFDPRNGRERQALVDGLELLRIVKKDRLGIPETKG
Ga0182034_1022152613300016371SoilGYAMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGRECQALVDGLELLRIVKKDRLGIPRSEG
Ga0182034_1028981323300016371SoilMELKYPQWQEPLASAILEFNHEQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRRVKRDRLGIPEAKGEESPRS
Ga0182034_1037389933300016371SoilQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG
Ga0182034_1177125123300016371SoilMSNELKYPQWQEPLASAILEFNREQLREMVQKAEEAIAQRIERLASVQVTDTNVGRSSTGWIFSGVQKKDRLGIPEAKGEESPRS
Ga0182040_1042214313300016387SoilAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG
Ga0182040_1102662913300016387SoilMELKYPQGQEPIASAILEFNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSAKKRPP
Ga0182037_1139271123300016404SoilLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE
Ga0182039_1010427353300016422SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGRECQALVDGLELLRLVKKDRLGIPRSEG
Ga0182038_1042526613300016445SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPRTEG
Ga0182038_1091236913300016445SoilMDLKYPQWQEPLAEAILEFDPQQVREKVQRAEEAIVRRIEELAFDPRNAREPQALVNGLELLRILTKARLGVPRNEE
Ga0126371_1324914323300021560Tropical Forest SoilMDLKYPQWQEPLAAAILEFNRDLLREKVQKAEEAIAHRIEQLAFDHGNLHERPALFDGLDLLRSVKKDRLGIPEAKSK
Ga0207746_102335423300026865Tropical Forest SoilMALKYPQWQQPLTSVILEFNREQLREKVKRAEEAIAQRIEQLAFDPGNEHERRALFDGLDLLRSVKKDRLGIPDAKG
Ga0207779_101192843300026928Tropical Forest SoilYPQWQQPLTSVILEFNREQLREKVKRAEEAIAQRIEQLAFDPGNEHERRALFDGLDLLRSVKKDRLGIPDAKGG
Ga0207783_102384713300026942Tropical Forest SoilMVLTYPQWQEPLAAAILEFNPQQLREKIREAEEAIARRIDELAFDPRNEHERRALFDGLDLLRSVKKDRLGIPDAKGG
Ga0318516_1038659623300031543SoilMELKYPQWQEPVASAILESNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0318516_1041323623300031543SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG
Ga0318534_1081903123300031544SoilMELKYPQGQEPIASAILEFNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRRVKKDRLGIPEAKGEESPRS
Ga0318541_1004062423300031545SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLAFDPGTEHERRALFDGLDLLRSVKNRLGIPGGKGEASRQAEGV
Ga0318538_1072922413300031546SoilMELKYPQWQEPLASAILEFNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0318515_1044390523300031572SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPRSEG
Ga0310915_1000397733300031573SoilMSNELKYPQWQEALASAILEFNREQLRAKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0310915_1005853823300031573SoilMDLKYRQLQEPLASAILEFNREQLREKVQKAEEAITQRIEQLAFDPGTEHERRALFDGLDLLRSVKNRLGIPGGKGEASRQAEGV
Ga0310915_1010536513300031573SoilMELKYPQWQEPLASAILEFNHEQLREKVQKAEEAIAQRIEQLTSDPGNGHERRALFDGLDLLRRVKKDRLGIPEAKGEESPRS
Ga0310915_1085871023300031573SoilMALKYPQWQQPLTSVILEFDREQLREKVKRAEEAIAQRIEQLAFDPGNEHERRALFDGMDLLRSVKKDRLGIPEAKGG
Ga0318561_1070673823300031679SoilMSNELKYPQWQEALASAILEFNREQLRAKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAK
Ga0318574_1020298013300031680SoilMDLKYRQLQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFGGLDLLRSVKNRLGISEGKGEASRQGEGV
Ga0306917_1020671123300031719SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE
Ga0306917_1023265813300031719SoilEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG
Ga0306917_1076661913300031719SoilMDLKYPQWQQPLAEAILEFNPQQLREKVQRAEEAIVRRIEELAFDPRNGREGQALVDGLELLRIVKKDRLGIPRTEG
Ga0306917_1081380013300031719SoilMELKYPQWQELLASAILEFNREQLRERVQKAEEVIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPCGQKSRTA
Ga0306917_1105301923300031719SoilQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFGGLDLLRSVKNRLGISEGKGEASRQGEGV
Ga0318501_1083121413300031736SoilMDLKYPQWQEPLVEAILEFNPQQLREKVQRAEEAIVRRIEELAFDPRNGRERQALVDGLELLRIAKKDRLGIPRSKGE
Ga0306918_1042476323300031744SoilTQMDLKYPQWQQPLAEAILEFNPQQLREKVQRAEEAIVRRIEELAFDPRNGREGQALVDGLELLRIVKKDRLGIPRTEG
Ga0318492_1005648223300031748SoilMSNELKYPQWQEPLASAILEFNREQLRAKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0318509_1056112913300031768SoilDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG
Ga0318521_1097499813300031770SoilLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE
Ga0318546_1007749113300031771SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDELLHGSDSLPLGN
Ga0318543_1057555913300031777SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFGGLDLLRSVKNRLGIPGGKGEASRQAEGV
Ga0318529_1031817013300031792SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIP
Ga0318576_1025418713300031796SoilMELKYPQGQEPIASAILEFNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0318568_1096364213300031819SoilCVMSNELKYPQWQEALASAILEFNREQLRAKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0310917_1013296213300031833SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLAFDPGTEHERRALFDGLDLLRSVKNRLGIPGGKGEASRQAE
Ga0310917_1086657913300031833SoilMELKYPQWQEPVASAILESNREQLREKVQKAEEAIAQRIEQLASDPGNEHERRALFDGLDLLRSVKKD
Ga0310917_1109068213300031833SoilMDLKYPQWQEPLAEAILEFDPQQVREKVQRAEEAIVRRIEELAFDPRNGRERQALVDGLELLRIVKKD
Ga0306919_1032005733300031879SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGRECQALVDGLELLRIVKKDRLGIPRSEG
Ga0318544_1020279313300031880SoilMSNELKYPQWQEPLASAILEFNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKNRLGIPGGKGEASRQAEGV
Ga0306923_1031224923300031910SoilMDLKYRQWQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFGGLDLLRSVKNRLGISEGKGEASRQGEGV
Ga0306923_1052008713300031910SoilMELKYPQWQEPLASAILEFNREQLREKVQKAEEAIAQRIEQLAFDHGMEHERRALFDGLDLLRSVKKDRLGILEEKGE
Ga0306923_1130249313300031910SoilLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG
Ga0306923_1136476313300031910SoilDSLDGTQMDLKYPQWQQPLAEAILEFNPQQLREKVQRAEEAIVRRIEELAFDPRNGREGQALVDGLELLRIVKKDRLGIPRTEG
Ga0306923_1242443613300031910SoilAILEFDPQQVREKVQRAEEAIVRRIEELAFDPRNGRERQALVDGLELLRIVKKDRLGVPRNEE
Ga0306921_1003751813300031912SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGRECQALVDGLELLRIVKKDRLGIPRS
Ga0306921_1028037033300031912SoilEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPRTEG
Ga0306921_1169120913300031912SoilMELKYPQWQEPLASAILEFNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRRVKKDRLGIPEAKGEESPRS
Ga0310912_1022169623300031941SoilGTQMDLKYPQWQQPLAEAILEFNPQQLREKVQRAEEAIVRRIEELAFDPRNGREGQALVDGLELLRIVKKDRLGIPRTEG
Ga0310912_1037686923300031941SoilMELKYPQWQEPLASAILEFNHEQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRRVKKDRLGIPEAKGEESPRS
Ga0310916_1025487113300031942SoilFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE
Ga0310916_1083034013300031942SoilAEAILEFNPQQLREKVQRAEEAIVRRIEELAFDPRNGREGQALVDGLELLRIVKKDRLGIPRTEG
Ga0310916_1097185513300031942SoilDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGRECQALVDGLELLRIVKKDRLGIPRSEG
Ga0310913_1029079713300031945SoilNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG
Ga0310913_1037001323300031945SoilMELKYPQWQEPLASAILEFNREQLREKVQKAEEAIAQRIEQLAFDHGMEHERRALFDGLDLLRSVKKDRLGI
Ga0310913_1042127913300031945SoilQEALASAILEFNREQLRAKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0310910_1012164413300031946SoilMELKYPQWQEPLASAILEFNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRRVKKDRLGIP
Ga0310910_1018625213300031946SoilMELKYPQWQEPVASAILESNREQLREKVQKAEEAIAQRIEQLASDPGNEHERRALFDGLDLLRSVKKDRLGSPEVKGEESPRS
Ga0310909_1155531513300031947SoilKYRQLQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFGGLDLLRSVKNRLGISEGKGEASRQGEGV
Ga0310911_1012667033300032035SoilMSNELKYPQWQEALASAILEFNREQLRAKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKK
Ga0310911_1026275113300032035SoilMELKYPQWQEPLASAILEFNHEQLREKVQKAEEAIAQRIEQLASDPGNEHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0318558_1020162013300032044SoilMDLKYRQLQEPLASAILEFNREQLREKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPEAKGEESPRS
Ga0318506_1001669733300032052SoilMELKYPQWQEPLASAILEFNREQLRERVQKAEEVIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPCGQKSRTA
Ga0318575_1064163113300032055SoilMELKYPQWQEPLASAILEFNREQLRAKVQKAEEAIAQRIEQLASDPGNGHERRALFDGLDLLRSVKKDRLGIPCGQKSRTA
Ga0318575_1067517223300032055SoilQEPLASAILEFNREQLREKVQKAEEAITQRIEQLTFDPGNEHERRALFGGLDLLRSVKNRLGIPGGKGEASRQAEGV
Ga0318533_1079503813300032059SoilMELKYPQWQEPVASAILESNREQLREKVQKAEEAIAQRIEQLASDPGNEHERRALFDGLDLLRSVKK
Ga0306924_1135849923300032076SoilMELKYPQWQEPLASAILEFNREQLREMVQKAEKAIAQRIERLASVQVTDTNVGRSSTGWIFSGVQKKDRLGIPEAKGEESPRS
Ga0318577_1048537713300032091SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKK
Ga0306920_100015425203300032261SoilQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGRECQALVDGLELLRIVKKDRLGIPRSEG
Ga0306920_10035973543300032261SoilMELKYPQWQEPLASAILEFNREQLREMVQKAEKAIAQRIERLASVQVTDTNVGHSSTGWIFSGVQKKDRLGIPEAKGEESPRS
Ga0310914_1008921213300033289SoilMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGRECQALVDGLELLRIVKKDR
Ga0310914_1049061623300033289SoilMELKYPQWQEPLASAILEFNREQLREMVQKAEEAIAQRIERLASVQVTDTNVGRSSTGWIFSGVQKKDRLGIPEAKGEESPRS
Ga0310914_1111121513300033289SoilMDLKYPQWQQPLAEAILEFNPQQLREKVQRAEEAIVRRIEELAFDPRNGREGQALVDGLELLRIVKKDRLGI
Ga0310914_1120940813300033289SoilPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKDE
Ga0318519_1056055623300033290SoilAMDLKYPQWQEPLAEAICEFNPEHLRQKVQRAEEAIVRRIEELAFDPPNGREGQALVDGLELLRIVKKDRLGIPETKG


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