Metagenome / Metatranscriptome Family F096408

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096408
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	101 residues
Representative Sequence	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Number of Associated Samples	70
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.81 %
% of genes near scaffold ends (potentially truncated)	55.77 %
% of genes from short scaffolds (< 2000 bps)	91.35 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (65.385 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.769 % of family members)
Environment Ontology (ENVO)	Unclassified (58.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.77% β-sheet: 7.77% Coil/Unstructured: 84.47%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13472	Lipase_GDSL_2	1.92
PF01381	HTH_3	0.96
PF04226	Transgly_assoc	0.96
PF00239	Resolvase	0.96
PF04392	ABC_sub_bind	0.96
PF13403	Hint_2	0.96
PF13924	Lipocalin_5	0.96
PF13683	rve_3	0.96
PF13817	DDE_Tnp_IS66_C	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.96
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.96
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
All Organisms	root	All Organisms	34.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
cellular organisms	root	All Organisms → cellular organisms	34.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.58 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.85 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.92 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10109360	Not Available	678	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1044900	Not Available	578	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1091886	Not Available	532	Open in IMG/M
3300000789\|JGI1027J11758_13047105	Not Available	751	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10053492	Not Available	897	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1035029	Not Available	705	Open in IMG/M
3300004268\|Ga0066398_10093980	Not Available	686	Open in IMG/M
3300004633\|Ga0066395_10704662	Not Available	600	Open in IMG/M
3300005332\|Ga0066388_101877694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300005332\|Ga0066388_104741249	Not Available	692	Open in IMG/M
3300005363\|Ga0008090_15586695	Not Available	658	Open in IMG/M
3300005713\|Ga0066905_100249700	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300005713\|Ga0066905_101207331	Not Available	676	Open in IMG/M
3300005764\|Ga0066903_100282134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2605	Open in IMG/M
3300005764\|Ga0066903_100669653	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300005764\|Ga0066903_101243512	Not Available	1386	Open in IMG/M
3300005764\|Ga0066903_101652404	Not Available	1217	Open in IMG/M
3300005764\|Ga0066903_103873972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300005764\|Ga0066903_105833503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	646	Open in IMG/M
3300005764\|Ga0066903_106359142	Not Available	616	Open in IMG/M
3300006032\|Ga0066696_10816962	Not Available	595	Open in IMG/M
3300010043\|Ga0126380_10494013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	937	Open in IMG/M
3300010046\|Ga0126384_10181234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1651	Open in IMG/M
3300010046\|Ga0126384_11326466	Not Available	668	Open in IMG/M
3300010047\|Ga0126382_11677399	Not Available	592	Open in IMG/M
3300010358\|Ga0126370_11469009	Not Available	647	Open in IMG/M
3300010359\|Ga0126376_10669445	Not Available	993	Open in IMG/M
3300010362\|Ga0126377_11411932	Not Available	769	Open in IMG/M
3300010362\|Ga0126377_12556522	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300010366\|Ga0126379_11036315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300010366\|Ga0126379_11682923	Not Available	739	Open in IMG/M
3300010366\|Ga0126379_13891500	Not Available	500	Open in IMG/M
3300010376\|Ga0126381_100539560	Not Available	1651	Open in IMG/M
3300010398\|Ga0126383_10897101	Not Available	973	Open in IMG/M
3300010868\|Ga0124844_1304674	Not Available	536	Open in IMG/M
3300012202\|Ga0137363_10194424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1624	Open in IMG/M
3300012948\|Ga0126375_10333402	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300012971\|Ga0126369_12903910	Not Available	561	Open in IMG/M
3300016294\|Ga0182041_10440338	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300016341\|Ga0182035_10266566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300016341\|Ga0182035_10947556	Not Available	761	Open in IMG/M
3300016341\|Ga0182035_11346106	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300016357\|Ga0182032_11140891	Not Available	669	Open in IMG/M
3300016357\|Ga0182032_11802448	Not Available	535	Open in IMG/M
3300016371\|Ga0182034_10774260	Not Available	820	Open in IMG/M
3300016387\|Ga0182040_10119634	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300016404\|Ga0182037_10902894	Not Available	766	Open in IMG/M
3300016445\|Ga0182038_11089144	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300016445\|Ga0182038_11644519	Not Available	578	Open in IMG/M
3300021361\|Ga0213872_10076828	Not Available	1502	Open in IMG/M
3300021478\|Ga0210402_11932653	Not Available	516	Open in IMG/M
3300021560\|Ga0126371_10346293	Not Available	1620	Open in IMG/M
3300028047\|Ga0209526_10032226	All Organisms → cellular organisms → Bacteria → Proteobacteria	3685	Open in IMG/M
3300031543\|Ga0318516_10689752	Not Available	580	Open in IMG/M
3300031544\|Ga0318534_10384118	Not Available	807	Open in IMG/M
3300031545\|Ga0318541_10860334	Not Available	506	Open in IMG/M
3300031564\|Ga0318573_10695754	Not Available	546	Open in IMG/M
3300031572\|Ga0318515_10179408	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300031573\|Ga0310915_10011231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5204	Open in IMG/M
3300031573\|Ga0310915_10322949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1092	Open in IMG/M
3300031573\|Ga0310915_11052559	Not Available	566	Open in IMG/M
3300031573\|Ga0310915_11137407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031679\|Ga0318561_10732950	Not Available	543	Open in IMG/M
3300031681\|Ga0318572_10837548	Not Available	547	Open in IMG/M
3300031719\|Ga0306917_10088785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2190	Open in IMG/M
3300031719\|Ga0306917_10096122	Not Available	2115	Open in IMG/M
3300031719\|Ga0306917_10195687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1528	Open in IMG/M
3300031719\|Ga0306917_10655312	Not Available	825	Open in IMG/M
3300031719\|Ga0306917_11082584	Not Available	624	Open in IMG/M
3300031744\|Ga0306918_10561501	Not Available	894	Open in IMG/M
3300031744\|Ga0306918_10835511	Not Available	718	Open in IMG/M
3300031768\|Ga0318509_10419952	Not Available	748	Open in IMG/M
3300031771\|Ga0318546_10145749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1592	Open in IMG/M
3300031771\|Ga0318546_10155757	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300031777\|Ga0318543_10534284	Not Available	525	Open in IMG/M
3300031794\|Ga0318503_10140685	Not Available	776	Open in IMG/M
3300031796\|Ga0318576_10443125	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031797\|Ga0318550_10567848	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031820\|Ga0307473_10784896	Not Available	678	Open in IMG/M
3300031833\|Ga0310917_10441496	Not Available	885	Open in IMG/M
3300031833\|Ga0310917_10889249	Not Available	599	Open in IMG/M
3300031879\|Ga0306919_10190118	Not Available	1520	Open in IMG/M
3300031879\|Ga0306919_11111618	Not Available	602	Open in IMG/M
3300031890\|Ga0306925_10075763	All Organisms → cellular organisms → Bacteria → Proteobacteria	3546	Open in IMG/M
3300031890\|Ga0306925_10384458	Not Available	1505	Open in IMG/M
3300031890\|Ga0306925_10662073	Not Available	1096	Open in IMG/M
3300031910\|Ga0306923_10175889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2444	Open in IMG/M
3300031910\|Ga0306923_11868066	Not Available	614	Open in IMG/M
3300031912\|Ga0306921_10244062	Not Available	2104	Open in IMG/M
3300031945\|Ga0310913_10820732	Not Available	655	Open in IMG/M
3300031946\|Ga0310910_10376798	All Organisms → cellular organisms → Bacteria → Proteobacteria	1123	Open in IMG/M
3300031947\|Ga0310909_10107016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2255	Open in IMG/M
3300031947\|Ga0310909_10200027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1660	Open in IMG/M
3300031954\|Ga0306926_10730757	Not Available	1198	Open in IMG/M
3300031954\|Ga0306926_11446505	Not Available	795	Open in IMG/M
3300032001\|Ga0306922_10562243	Not Available	1212	Open in IMG/M
3300032001\|Ga0306922_10626833	Not Available	1137	Open in IMG/M
3300032001\|Ga0306922_11195060	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300032052\|Ga0318506_10237818	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300032055\|Ga0318575_10688086	Not Available	517	Open in IMG/M
3300032059\|Ga0318533_10394261	Not Available	1011	Open in IMG/M
3300032090\|Ga0318518_10429839	Not Available	677	Open in IMG/M
3300032261\|Ga0306920_102683381	Not Available	681	Open in IMG/M
3300033289\|Ga0310914_10317791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1405	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.62%
Loam	Environmental → Terrestrial → Soil → Loam	14.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101093602	3300000597	Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
AP72_2010_repI_A10DRAFT_10449002	3300000651	Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATSDERQNFPGIAPTSGVNITPTVGGIDQSPAGSLGRHAGWRKLFGRTSGC*
AF_2010_repII_A100DRAFT_10918861	3300000655	Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDEGWNSPGVAATTGVNITPEVGGISDQSPAGRLGRH
JGI1027J11758_130471052	3300000789	Soil	LQFHWKLEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLGERRNLPGVAPTTGVNITPTVGSISDQSPAGSLGRHAGSRKSFGRTSGC*
AF_2010_repII_A001DRAFT_100534922	3300000793	Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLGKGQNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
AP72_2010_repI_A100DRAFT_10350292	3300000837	Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0066398_100939801	3300004268	Tropical Forest Soil	MQRYWKREKVMVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDEGRNSPGVAPTTGVNITPKVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0066395_107046621	3300004633	Tropical Forest Soil	QPTIVKCFKGANLCALVWRYAPLQFHWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRAILGERRTPPGVAPTTGVNITPTVGGISDQSPAGSLGRRAGSRKSFGRTSGC*
Ga0066388_1018776941	3300005332	Tropical Forest Soil	VQPYWKQEKVTVDRLRVGDLVDLAEDRCFGALTAPELDALRRVWPDHQVIRATLVERRNSPGAAPTTGVNITPTVNGISDQSPAGSLGRHAGSRKSFGRTSGC*
Ga0066388_1047412491	3300005332	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGSLEALTAPELDARRRAWSDNPVIRATFDASGAVAITGVNITPAVGGISDQSPAGSLARPAESRKSFSRTSGC*
Ga0008090_155866951	3300005363	Tropical Rainforest Soil	VQAYWKQEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTSGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0066905_1002497003	3300005713	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDNGQNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0066905_1012073311	3300005713	Tropical Forest Soil	FITFLTTTTVVKCSKGVNLGPLAWRYAPLQFHWKLEKVTVDMLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRAILGERNLPGVAPTTGVNITPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC*
Ga0066903_1002821342	3300005764	Tropical Forest Soil	VDLAEDGSFAALTAPELEALRRVWPDHRVIRATFDERQNSPGVALTPGVNGAPMGGGISDQSPAGSLGRHAGSRKLFGRTSGC*
Ga0066903_1006696533	3300005764	Tropical Forest Soil	MYWKREKVTVDKLRVGDLVDLAEDGCFEAVRVPELDALRRVWPDHPVIRATSDERQNFPGIAPTSGVNITPTVGGIDQSPAGSLGRHAGWRKLFGRTSGC*
Ga0066903_1012435122	3300005764	Tropical Forest Soil	MQYWKREKVTADTLRVGDLVDLAEDGSFEALTAPELDALRRVWPDHPVIRATFDVRQHSPGVVPIAGVNITPTVGGISDQSPAGSLARPAESRKSFSRTSGC*
Ga0066903_1016524042	3300005764	Tropical Forest Soil	MLKVRTLQYHWKREKVTVDRLRVADLVDLAEDGSFAALTAPELDALRRVWPDHRVIRANFDERQYSPGVAPTTGVNSAPTVGGISDQLPAESLGGHAGSRKLFGRTSGC*
Ga0066903_1038739721	3300005764	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGSLEALTAPELDARRRAWSDNPVIRATFDASGAVAITGVNITPAVGGISDQSPAGSLARPAESRKSFSR
Ga0066903_1058335032	3300005764	Tropical Forest Soil	MQHHWKREKVTVDRLRVGDLVDLAEDGCFEALRVPELDALRRVWPDHPVIRATSNERQNSPGVAPTSGVNITPTVGGIDQSPAGSLGRHAGGRKLFSRTSGC*
Ga0066903_1063591422	3300005764	Tropical Forest Soil	VTVDRLRVADLVDLAEDGSFAALTAPELDALRRVWPDHRVIRANFDERQNSPGVAPTTGVNSAPTVGGISDQWPAGSLGRRAGSRKLFGRTSGC*
Ga0066696_108169621	3300006032	Soil	MQQYWKREKVTADTLRVGDLVDLAENGSFEALTAPELDALRRVWPDHPVIRATFDVRQHSPGVVPSVNITPTVGGISDESPAGSLARPA
Ga0126380_104940132	3300010043	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVNITPTVGGISDQSSAGSFGRHAGSRKSFGRTSGC*
Ga0126384_101812341	3300010046	Tropical Forest Soil	WKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLGERRNLPGVGPTTGVNITPTVGGVSDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0126384_113264661	3300010046	Tropical Forest Soil	RVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPITGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0126382_116773991	3300010047	Tropical Forest Soil	GGTTDALKREKVTVDRLRVGDLVDLAEDRCFGALTAPKLDALRRVWPDHQVIRATLVERRNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0126370_114690091	3300010358	Tropical Forest Soil	WKREKVTVDRLRVGDLVDLAEDRCFGALTAPELDALRRVWPDHQVIRATLVERRNSPGVAPTTGVNITPTVNGISDQSPAGSLGRHAGSRKSFGRTSGC*
Ga0126376_106694452	3300010359	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLVERRNSPGAAPTTGVNITPTVNGISDQSPAGSLGRHAGSRKSFGRTSGC*
Ga0126377_114119321	3300010362	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDNGQNSPGVAPTTGVNITPTVNGISDQSPAGSLGRHAGSRKSFGRTSGC*
Ga0126377_125565221	3300010362	Tropical Forest Soil	MYWKREKVTVDKLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0126379_110363151	3300010366	Tropical Forest Soil	MQLHWKREKVTVDTLRVGDLVDLAEDGCFEALRVPELDALRRVWPDHPVIRATSDKRQNSPGVSPTSGVNITPTVGGIDQSPAGSLGRHAGWRKLFGRTSGC*
Ga0126379_116829231	3300010366	Tropical Forest Soil	LQFHWKREKVTVDRLRVGDLVDLAEDGSFGALTAPELDALRRVWPDHQVIRAILGERNLPGVAPTTGVNITPTVGGISDQSPAGSPGRHAGSRKSFGRTSGC*
Ga0126379_138915001	3300010366	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPITGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0126381_1005395601	3300010376	Tropical Forest Soil	MQRYWKREKVMVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDEGRNSPGVAPTTGVNITPKVGGISDQSPAGSFGRHAGSRKPFGRTSGC*
Ga0126383_108971011	3300010398	Tropical Forest Soil	MIYFLSCFKMLQSCEPMRTRYEARTMQHHWKREKVTVDRLRVGDLVDLAEDGCFEALRVPELDALRRVWPDHPVIRATSNERQNSPGVAPTSGVNITPTVGGIDQSPAGSLGRHAGGRKLFSRTSGC*
Ga0124844_13046741	3300010868	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTSGVNITPTVGGISDQSPAG
Ga0137363_101944242	3300012202	Vadose Zone Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGSFEALTAPELDALRRVWPDHPVIRANFDVRQNSPEVVPITGVNIMPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC*
Ga0126375_103334021	3300012948	Tropical Forest Soil	MQQYWKREKVAVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC*
Ga0126369_129039101	3300012971	Tropical Forest Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSF
Ga0182041_104403382	3300016294	Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPITGVDITPTVGGISDQSPVGSFGRHAGSRKSFGRTSGC
Ga0182035_102665662	3300016341	Soil	LTTTTAVVKCSKGANLCALVWRYAPLQFHWKQEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLDERRNFPSVAPTTGVNITPTVGGISDQSPAGSLGRYAGSRKSFGRTSGC
Ga0182035_109475562	3300016341	Soil	VTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTSGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0182035_113461062	3300016341	Soil	VTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0182032_111408911	3300016357	Soil	MRHAPLQYHWKREKVTVERLRVGDLVDLGEDGCFGTLTAPELAALRQVWPDHPVIRANFDERQNSPGVAPTTGVNSAPTVGGISDEWPAGSLGGRAGSRKL
Ga0182032_118024481	3300016357	Soil	MRACMRHAPLPHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVAFERQNSFGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRT
Ga0182034_107742602	3300016371	Soil	THMHWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRAALDERRNSPGVAPTTAIKIAPTVGGISDQSPAGSLGRHARSRKSFGRTSGC
Ga0182040_101196341	3300016387	Soil	MRACMRHAPLPHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVTFERQNSPGVATPTGVNMTPTVGGISDQSPAGSLGRHAGSRKSF
Ga0182037_109028941	3300016404	Soil	MRHAPLPHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVAFERQNSFGVATTTGVNMTPTVGGISDQSPAGRLGRHAGSGKSFGRTSGC
Ga0182038_110891441	3300016445	Soil	EKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0182038_116445192	3300016445	Soil	LQFHWKLEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRAILGERNLPGVAPTTGVNITPTVGGISDQSPAGSLGRH
Ga0213872_100768282	3300021361	Rhizosphere	MQQYWKREKVTVDSLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0210402_119326531	3300021478	Soil	MQQYWKQEKVTVDRLRVGDLVDLAEDGSFEALTAPELDALRRVWPDHPVIRATFDVRQNSPGVVPITGANITPTVGGISDQSPTGNLGRHVGSRKSFGRTSGC
Ga0126371_103462931	3300021560	Tropical Forest Soil	MLQSVNLGALVWRYAPLQFHWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLGERRNLPGVAPTTGVNITPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0209526_100322265	3300028047	Forest Soil	MRACMRYAPLQYYWKREKVTVDRLRIGDLVDLGEDGCFGALTSLELDALRRVWPDHPVIRATLDERRNSPGVAMTIGVGITPTVGGIGDQSPAGSLRRHAGSRKSFGRTSGC
Ga0318516_106897521	3300031543	Soil	VTVDRLRVGDLVDLAGDGCFGALTAPELDALRRVWPDHQVIRATLDERRNFPSVAPTTGVNITPTVGGISDQSPAGSLGRYAGSRKSFGRTSGC
Ga0318534_103841182	3300031544	Soil	QYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0318541_108603341	3300031545	Soil	VMAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVTFERQNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0318573_106957542	3300031564	Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTSGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0318515_101794082	3300031572	Soil	MHWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0310915_100112319	3300031573	Soil	VDLAEDGCFGALTAPELDALRRVWPDHQVIRATLDERRNFPSVAPTTGVNITPTVGGISDQSPAGSLGRYAGSRKSFGRTSGC
Ga0310915_103229491	3300031573	Soil	GVNLGALVWRYAPLQVHWKLEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRAILGERNLPGVAPTTGVNITPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0310915_110525592	3300031573	Soil	MQQYWKREKVTVDRLGVGNLVDLGEDGCFGALTAPELDALRRVWPDHPVIRATFDVRRNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0310915_111374071	3300031573	Soil	REKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVAFERQNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0318561_107329502	3300031679	Soil	TTTTAVVKCSKGANLYALVWRYAPLQFHWKQEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLDERRNFPSVAPTTGVNITPTVGGISDQSPAGSLGRYAGSRKSFGRTSGC
Ga0318572_108375481	3300031681	Soil	KVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDEGRNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0306917_100887852	3300031719	Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0306917_100961222	3300031719	Soil	MHWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRAALDERRNSPGVAPTTAIKIAPTVGGISDQSPAGSLGRHARSRKSFGRTSGC
Ga0306917_101956871	3300031719	Soil	GDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDEGRNSPGVATTTGVNMTPTVGGISDQSPAGRLGRHAGSGKSFGRTSGC
Ga0306917_106553121	3300031719	Soil	LQFHWKLEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRAILGERNLPGVAPTTGVNITPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0306917_110825841	3300031719	Soil	DRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTSGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0306918_105615012	3300031744	Soil	ENGQFEALMAPELDALKRVWPDHTVIRAAFDVRRNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0306918_108355111	3300031744	Soil	LAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0318509_104199521	3300031768	Soil	MRACMRHAPLPHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVAFERQNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSG
Ga0318546_101457493	3300031771	Soil	RVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLDERRNFPSVAPTTGVNITPTVGGISDQSPAGSLGRYAGSRKSFGRTSGC
Ga0318546_101557571	3300031771	Soil	MFQSANLCALGMEARMMHWKREKVTVGRLRVGDLVDLAENGQFEALMAPELDALKRVWPDHTVIRAAFDERRNAPGVALTTGANVTPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0318543_105342841	3300031777	Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGGTSGC
Ga0318503_101406851	3300031794	Soil	ANLCALGMEARMMHWKREKVTVGRLRVGDLVDLAENGQFEALMAPELDALKRVWPDHTVIRAAFDERRNAPGVALTTGANVTPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0318576_104431252	3300031796	Soil	YATMQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0318550_105678482	3300031797	Soil	EKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTSGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0307473_107848962	3300031820	Hardwood Forest Soil	TVDRLRVADLVDLAEDGSFAALTAPELDALRRVWPDHRVIRANFDERQNSPGVAPATGVNGAPTVGGISDQSPAGSFGRHAGSRKLFGRTSGC
Ga0310917_104414961	3300031833	Soil	MRACMRHAPLHHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVTFERQNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0310917_108892491	3300031833	Soil	LAENGQFEALMAPELDALKRVWPDHTVIRAAFDVRRNSPGVAPTTGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0306919_101901183	3300031879	Soil	MRACMRHAPLPHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVAFERQNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0306919_111116181	3300031879	Soil	MRYAPLQYHWKREKVTVDRLRIGDLVDLGEDGCFGALTSLELDALRRVWPDHPVIRATLDERRNSPGVAMTIGVGITPTVGGIGDQSPAGNLRRHAGSRKSFGRTSGC
Ga0306925_100757637	3300031890	Soil	VDLAEDGCFGALTAPELDALRRVWPDHQVIRAILGERNLPGVAPTTGVNITPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0306925_103844581	3300031890	Soil	MMHWKREKVTVGRLRVGDLVDLAENGQFEALMAPELDALKRVWPDHTVIRAAFDERRNSPGVALTTGANVTPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0306925_106620731	3300031890	Soil	MRACMRHAPLPHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVTFERQNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0306923_101758891	3300031910	Soil	TAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVTFERQNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0306923_118680661	3300031910	Soil	MMHWKREKVTVGRLRVGDLVDLAENGQFEALMAPELDALKRVWPDHTVIRAAFDERRNAPGVALTTGANVTPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0306921_102440624	3300031912	Soil	MQRYWKREKVMVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDEGRNSPGVATTTGVNMTPTVGGISDQSPAGRLGRHAGSGKSFGRTSGC
Ga0310913_108207321	3300031945	Soil	KVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATFDEGRNSPGVAPTSGVNITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0310910_103767983	3300031946	Soil	LQFHWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLGERRNLPGVAPTTGVNITPTVGGISDQSPVGSLGRHAGSRKSFGRTSGC
Ga0310909_101070162	3300031947	Soil	LQFHWKQEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLDERRNFPSVAPTTGVNITPTVGGISDQSPAGSLGRYAGSRKSFGRTSGC
Ga0310909_102000272	3300031947	Soil	MRACMRHAPLPHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVAFERQNSFGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC
Ga0306926_107307571	3300031954	Soil	QRYWKREKVMVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDEGRNSPGVATTTGVNMTPTVGGISDQSPAGRLGRHAGSGKSFGRTSGC
Ga0306926_114465051	3300031954	Soil	GDLVDLAENGQFEALMAPELDALKRVWPDHTVIRAAFDERRNSPGVALTTGANITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0306922_105622431	3300032001	Soil	MQQYWKREKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRT
Ga0306922_106268331	3300032001	Soil	MRACMRHAPLHHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVTFERQNSPGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSG
Ga0306922_111950603	3300032001	Soil	AEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPITGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0318506_102378181	3300032052	Soil	RTMQRYWKREKVMVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDKGQNSPGAAPTTGVDITPTVGGISDQSPAGSFGRHAGSRKSFGRTSGC
Ga0318575_106880861	3300032055	Soil	MRACMRHAPLPHWKREKVTAERLRVGDLVDLGEDGCFGALTAPELDALRRVWPDHPVIRVAFERQNSFGVATTTGVNMTPTVGGISDQSPAGSLGRHAGSRKSFGRTSG
Ga0318533_103942611	3300032059	Soil	RLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHPVIRATLDEGRNSPGVATTTGVNMTPTVGGISDQSPAGRLGRHAGSGKSFGRTSGC
Ga0318518_104298391	3300032090	Soil	LTTTTAVVKCSKGANLYALVWRYAPLQFHWKQEKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRATLDERRNFPSVAPTTGVNITPTVGGISDQSPAGSLGRYAGSRKSFGRTSGC
Ga0306920_1026833811	3300032261	Soil	LTTTTVVVKCSKGANLCALVWRYAPLQFRWKQEKVTVDSLRVGDLVDLAGDGCFGALTGPELDALRRVWPDHQVIRATLGERRNFPSVAPTTGVNITPTVGGISDQSPAGSLGRYGGSRKSFGRTSGC
Ga0310914_103177911	3300033289	Soil	KLQKVTVDRLRVGDLVDLAEDGCFGALTAPELDALRRVWPDHQVIRAILGERNLPGVAPTTGVNITPTVGGISDQSPAGSLGRHAGSRKSFGRTSGC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096408

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences