Metagenome / Metatranscriptome Family F096407

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096407
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	52 residues
Representative Sequence	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRGVQKMPDVGNGVIGF
Number of Associated Samples	62
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	14.71 %
% of genes near scaffold ends (potentially truncated)	94.23 %
% of genes from short scaffolds (< 2000 bps)	91.35 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.769 % of family members)
Environment Ontology (ENVO)	Unclassified (61.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.423 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.45% β-sheet: 0.00% Coil/Unstructured: 54.55%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01381	HTH_3	4.81
PF00486	Trans_reg_C	2.88
PF01402	RHH_1	2.88
PF00664	ABC_membrane	1.92
PF00072	Response_reg	1.92
PF03354	TerL_ATPase	0.96
PF00196	GerE	0.96
PF04519	Bactofilin	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.96
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.27 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.35 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.92 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.54 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.92 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.54 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.54 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.96 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.54 %
Gemmata palustris	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata palustris	0.96 %
Bradyrhizobium sp. Leo170	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04XW84X	Not Available	506	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10085230	Not Available	789	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1039563	Not Available	855	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1064555	Not Available	648	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1069736	Not Available	620	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1071963	Not Available	609	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10019057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1649	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10054425	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10103249	Not Available	601	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10139009	Not Available	505	Open in IMG/M
3300005332\|Ga0066388_102228999	Not Available	989	Open in IMG/M
3300005332\|Ga0066388_102484337	Not Available	941	Open in IMG/M
3300005332\|Ga0066388_103378468	Not Available	815	Open in IMG/M
3300005332\|Ga0066388_103885657	Not Available	762	Open in IMG/M
3300005332\|Ga0066388_105018388	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005363\|Ga0008090_10099066	Not Available	662	Open in IMG/M
3300005471\|Ga0070698_100905876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300005518\|Ga0070699_101612113	Not Available	595	Open in IMG/M
3300005713\|Ga0066905_100808887	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005713\|Ga0066905_100939042	Not Available	759	Open in IMG/M
3300005713\|Ga0066905_101407915	Not Available	631	Open in IMG/M
3300005713\|Ga0066905_101621950	Not Available	592	Open in IMG/M
3300005713\|Ga0066905_102244977	Not Available	509	Open in IMG/M
3300005764\|Ga0066903_104804534	Not Available	718	Open in IMG/M
3300005764\|Ga0066903_105628325	Not Available	659	Open in IMG/M
3300005764\|Ga0066903_105900118	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005764\|Ga0066903_106229111	Not Available	623	Open in IMG/M
3300005764\|Ga0066903_108417632	Not Available	526	Open in IMG/M
3300006049\|Ga0075417_10358395	Not Available	715	Open in IMG/M
3300010043\|Ga0126380_11414209	Not Available	612	Open in IMG/M
3300010047\|Ga0126382_10640940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300010358\|Ga0126370_11469489	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300010359\|Ga0126376_10937962	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300010376\|Ga0126381_102696697	Not Available	710	Open in IMG/M
3300010398\|Ga0126383_10663725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1119	Open in IMG/M
3300010398\|Ga0126383_11457793	Not Available	774	Open in IMG/M
3300010868\|Ga0124844_1259366	Not Available	606	Open in IMG/M
3300016294\|Ga0182041_12284244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300016319\|Ga0182033_10944502	Not Available	765	Open in IMG/M
3300016319\|Ga0182033_11230965	Not Available	671	Open in IMG/M
3300016319\|Ga0182033_11235538	Not Available	670	Open in IMG/M
3300016319\|Ga0182033_11333610	Not Available	645	Open in IMG/M
3300016319\|Ga0182033_11778086	Not Available	559	Open in IMG/M
3300016341\|Ga0182035_11262112	Not Available	661	Open in IMG/M
3300016371\|Ga0182034_10127128	All Organisms → cellular organisms → Bacteria → Proteobacteria	1877	Open in IMG/M
3300016371\|Ga0182034_10158793	Not Available	1707	Open in IMG/M
3300016371\|Ga0182034_11128134	Not Available	680	Open in IMG/M
3300016404\|Ga0182037_11162635	Not Available	677	Open in IMG/M
3300016404\|Ga0182037_11396562	Not Available	619	Open in IMG/M
3300016422\|Ga0182039_10413389	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300021560\|Ga0126371_10819967	Not Available	1076	Open in IMG/M
3300025910\|Ga0207684_10123130	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300027907\|Ga0207428_11151138	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031543\|Ga0318516_10092195	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300031544\|Ga0318534_10647772	Not Available	599	Open in IMG/M
3300031546\|Ga0318538_10544477	Not Available	629	Open in IMG/M
3300031561\|Ga0318528_10784804	Not Available	509	Open in IMG/M
3300031561\|Ga0318528_10787531	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031564\|Ga0318573_10031533	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300031572\|Ga0318515_10583989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300031573\|Ga0310915_10028881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3443	Open in IMG/M
3300031573\|Ga0310915_10176953	Not Available	1485	Open in IMG/M
3300031573\|Ga0310915_10933065	Not Available	607	Open in IMG/M
3300031640\|Ga0318555_10430963	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031680\|Ga0318574_10285700	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata palustris	957	Open in IMG/M
3300031719\|Ga0306917_10835895	Not Available	721	Open in IMG/M
3300031719\|Ga0306917_11372516	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031723\|Ga0318493_10491554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300031747\|Ga0318502_10202789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1147	Open in IMG/M
3300031763\|Ga0318537_10367828	Not Available	530	Open in IMG/M
3300031781\|Ga0318547_10666296	Not Available	646	Open in IMG/M
3300031781\|Ga0318547_10895912	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031795\|Ga0318557_10154136	Not Available	1039	Open in IMG/M
3300031796\|Ga0318576_10154362	Not Available	1071	Open in IMG/M
3300031798\|Ga0318523_10540675	Not Available	575	Open in IMG/M
3300031799\|Ga0318565_10051748	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300031833\|Ga0310917_10413116	Not Available	917	Open in IMG/M
3300031880\|Ga0318544_10263632	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031890\|Ga0306925_12261909	Not Available	503	Open in IMG/M
3300031893\|Ga0318536_10545280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300031910\|Ga0306923_10315379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1785	Open in IMG/M
3300031910\|Ga0306923_11352943	Not Available	752	Open in IMG/M
3300031910\|Ga0306923_11625907	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031912\|Ga0306921_10093552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3475	Open in IMG/M
3300031912\|Ga0306921_10242309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2112	Open in IMG/M
3300031912\|Ga0306921_11173669	Not Available	856	Open in IMG/M
3300031912\|Ga0306921_11176066	Not Available	855	Open in IMG/M
3300031946\|Ga0310910_10998004	Not Available	654	Open in IMG/M
3300031954\|Ga0306926_11046781	Not Available	968	Open in IMG/M
3300031954\|Ga0306926_12745471	Not Available	533	Open in IMG/M
3300031959\|Ga0318530_10425770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300032010\|Ga0318569_10511582	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300032035\|Ga0310911_10599018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300032042\|Ga0318545_10365861	Not Available	519	Open in IMG/M
3300032044\|Ga0318558_10695784	Not Available	508	Open in IMG/M
3300032051\|Ga0318532_10165979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	784	Open in IMG/M
3300032051\|Ga0318532_10360128	Not Available	516	Open in IMG/M
3300032076\|Ga0306924_10249054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2040	Open in IMG/M
3300032261\|Ga0306920_100141594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3580	Open in IMG/M
3300032261\|Ga0306920_101869175	Not Available	845	Open in IMG/M
3300032261\|Ga0306920_102013837	Not Available	808	Open in IMG/M
3300032261\|Ga0306920_102973425	Not Available	640	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.08%
Plants	Host-Associated → Plants	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.81%
Loam	Environmental → Terrestrial → Soil → Loam	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02626920	2070309004	Green-Waste Compost	MKIALMVRQLDLGHILWCRRVVRVERAHRVRVVRSVQKMPDVGIGVIGFGYIAGL
AF_2010_repII_A1DRAFT_100852301	3300000597	Forest Soil	MRTRARLLKQMKIAVMVRQLDLGHILWCGRVVRVECTHRVRVVRGVQKMLDVGNG
AF_2010_repII_A100DRAFT_10395631	3300000655	Forest Soil	MKIAVMVRQLDLGHILWCGRVARVGRAHRIRGVRGVQNLLDVGRHGVIDFGH
AF_2010_repII_A100DRAFT_10645551	3300000655	Forest Soil	MVRQLDLGHILWCGRVVRIEHAHRVRVVRGVQKMPDVGNGVIGFDHVRF
AF_2010_repII_A100DRAFT_10697361	3300000655	Forest Soil	MKIALVVRPLDLGYILWCGRVVRVERAHRIRVMRSVEKMLDLGRH
AF_2010_repII_A100DRAFT_10719632	3300000655	Forest Soil	MVRQLDLGHILWCGRVVLVERAHRVRVVCGVQKILDVGNG
AF_2010_repII_A001DRAFT_100190574	3300000793	Forest Soil	MKIALVVRPLDLGYILWCGRVVRVERAHRIRVMRSVEKMLDLGRHA
AF_2010_repII_A001DRAFT_100544252	3300000793	Forest Soil	MKIALMVRQLDHGHILWCGRVVRVERAHRVRVVRGVQKMPDVGNG
AF_2010_repII_A001DRAFT_101032492	3300000793	Forest Soil	MGTRARLLKQMKIAVMVRQDLGQFLWCGRVVQVERAHRVRVVRCLQK
AF_2010_repII_A001DRAFT_101390092	3300000793	Forest Soil	MVLDYLSKMKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRGVQKMPDVGNGVIG
Ga0066388_1022289992	3300005332	Tropical Forest Soil	MWLALDYLRKMKIVVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGNGVIGFDHVRFH
Ga0066388_1024843371	3300005332	Tropical Forest Soil	MKIAVVVRQLDRDHIMWRGRVVRVERAHRIRVVRGVQKMLDVGRHGVIEFGHIWF
Ga0066388_1033784681	3300005332	Tropical Forest Soil	MVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGNGVIGF
Ga0066388_1038856571	3300005332	Tropical Forest Soil	MRGLALDYLSKMKIAVMVRQLDLGHVLWCGRVVRVERAHRVRVVRGVQKMPDVGNGVIGFDHVR
Ga0066388_1050183882	3300005332	Tropical Forest Soil	MRGLALDYLSKMKIAVMVRQLDLGPSCGAIVWFGSAHRVRVGVQKMPDVWRSTT*
Ga0008090_100990661	3300005363	Tropical Rainforest Soil	MRLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVECAHRVRVVRGVQKMPDVGNGVIGFDHVRFHVRD
Ga0070698_1009058761	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGIRTGGLALDYLSKMKIAVMVRQLDLGHVLWCGRVVRVERAHRVRVVRGVQKMPDV
Ga0070699_1016121131	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLALDYLSKMKIAVMVRQLDLRHILWCGRVVRVERAPRVRVVRGVQKMPDVGNGVIGFDHVR
Ga0066905_1008088871	3300005713	Tropical Forest Soil	MKIALVVRQLDLGHILWCGRVVRVKHAHRIRVVRGVQKMLDVGRH
Ga0066905_1009390421	3300005713	Tropical Forest Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRGVQKMPDVGNGVIGF
Ga0066905_1014079152	3300005713	Tropical Forest Soil	MKIAVMVRQLDLGHILSCGRVVRVERAHRVRVVRSVQKMPDVGNGVIGFDHVRFHVR
Ga0066905_1016219501	3300005713	Tropical Forest Soil	MKIAVMVRQLDLGHILWCGRVVWVERAHRVRVVRGVQKMPDV
Ga0066905_1022449772	3300005713	Tropical Forest Soil	MKIAVMVRQLDRGHILWCGRVVRVERAHRVRVVRSVQKMPDVGN
Ga0066903_1048045341	3300005764	Tropical Forest Soil	MWLALDYLRKMKIVVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVG
Ga0066903_1056283252	3300005764	Tropical Forest Soil	MRGLALDSLSKMKIAAMVRQLDVRHILWCGRVVRVERAHRVRIVRGVQKMPNVGS
Ga0066903_1059001182	3300005764	Tropical Forest Soil	MKIALVVRQLDLGHILKCGRVVRFERAHRICVVRGVQKMLDGGRHSVIDFG
Ga0066903_1062291112	3300005764	Tropical Forest Soil	MKITVVVRQLDRGHILWCGRVVRVERVHGIRVVRGVQKMLDVRRHGVIEFG
Ga0066903_1084176321	3300005764	Tropical Forest Soil	MKIAVMVRQLDLGHILWCGRVARVGRAHRIRGVRGVQNLLDVGRHGVID
Ga0075417_103583953	3300006049	Populus Rhizosphere	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRGVQKMPDVGNGVIGFDHVRFHVRDLV
Ga0126380_114142091	3300010043	Tropical Forest Soil	DYLSKMKIAVMVRQLDLGHILWCDRVVRVESAHRVRVGVQKMPDVWRSTT*
Ga0126382_106409401	3300010047	Tropical Forest Soil	MRGLALDYLSKMKIAVMVRQLDLGHILWCSRVVRVERAHRVRVVRGVQKMPDVGNGVI
Ga0126370_114694891	3300010358	Tropical Forest Soil	MKIAVMVWQLDLGHILWCGRVVRVERAHRVRVVRGVQKMPDVGNGVIGF
Ga0126376_109379622	3300010359	Tropical Forest Soil	MKIAVMVRQLDLGHIVWCGRVVRVERAHRVRVVRSVQKMLDVGNGVIGF
Ga0126381_1026966972	3300010376	Tropical Forest Soil	MVLDYLSKMKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRGVQKMPDVGNGVIGFDHVQP*
Ga0126383_106637251	3300010398	Tropical Forest Soil	MWLALDYLRKMKIVVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGN
Ga0126383_114577931	3300010398	Tropical Forest Soil	LSKMKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQTATA*
Ga0124844_12593661	3300010868	Tropical Forest Soil	MKIAVVVRQLDRDHIMWRGRVVRVERAHRIRVVRGV
Ga0182041_122842442	3300016294	Soil	MKIAVVVRQLDRDHIVWRGRVVRVERAHRICVVRGVQKMLDVGRHGVIEFGHIWFVAH
Ga0182033_109445021	3300016319	Soil	MGIRTVCGLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGNGVI
Ga0182033_112309651	3300016319	Soil	MGYQDRLALDYLSKMKIAVMVRQLDLDILWCGRVVRVERAHRVRVVRSVQKMPDVGNGVIGFDHVRF
Ga0182033_112355382	3300016319	Soil	MKIAVMVRQLDLGHILWCDRVVRVERAHRVRVVRGVQKM
Ga0182033_113336102	3300016319	Soil	MKIAVMVRQLDLGHILWCRRVVRVERAHRVRVVRSVQKMPDVGNGVIGFGYIAGL
Ga0182033_117780862	3300016319	Soil	MKIAVMVRQLDLGHIVWCGRVVRVERAHRVRVVRSVQK
Ga0182035_112621122	3300016341	Soil	MKIAVMVRQLDLGYVLWCGRVIRVERAHRVRVVRGVQKMPDVGNGVIGFDHVRFHVRD
Ga0182034_101271284	3300016371	Soil	VNLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVQRAHRVRVVRSVQKMPDVGSGVIGFDHVRF
Ga0182034_101587931	3300016371	Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRIRGVRGVQNLLDVGRHGVIDFGHI
Ga0182034_111281342	3300016371	Soil	MKIAVMVRQLDLGYVLWCGRVIRVERAHRVRVVRGVQKMPDVGNGVIGFDHV
Ga0182037_111626351	3300016404	Soil	MGIRTVCGLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQK
Ga0182037_113965622	3300016404	Soil	MKIAVMVRQLDLGYVLWCGRVIRVERAHRVRVVRGVQKMPDVGNGVIGFDHVRFHVRDLVMA
Ga0182039_104133894	3300016422	Soil	MGIRTVCGLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGNGLIGFDHVRFHVRD
Ga0182039_116577732	3300016422	Soil	MKIAVVVRQLVGHILWRDRVVRVDCAHRIRVVRGIQKMLDVGRHGVIDFGHIRFV
Ga0126371_108199671	3300021560	Tropical Forest Soil	MKIAVMVRQLDLGHILWCDRVVRVERAHRVRVVRGVQKMPDVGNGVIGFDHV
Ga0207684_101231305	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKIAVMVRQLDLRHILWCGRVVRVERAPRVRVVRGVQKMPDVGNGVIGFDHV
Ga0207428_111511382	3300027907	Populus Rhizosphere	MKIAVMVQQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGNGVIGFDHVRFHVRDLIMA
Ga0318516_100921953	3300031543	Soil	MKIAVMVRQLDLGHIVWCGRVVRVERAHRVRVVRSVQKMPDVGNGV
Ga0318534_106477721	3300031544	Soil	MGIRTVCGLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGNGLIGFDHVRFH
Ga0318538_105444772	3300031546	Soil	VNLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVQRAHRVRVVRSVQKMLDVGRC
Ga0318528_107848041	3300031561	Soil	MKIAVMVRQLDLGHILWCDRVVRVERAHRVRVVRGVQKMPNVGNGVIGFDHV
Ga0318528_107875311	3300031561	Soil	MKIAVMVRQLDLGHILRCGRVVRVERAHRVRVVRSVQKIP
Ga0318573_100315337	3300031564	Soil	MKIAVMVRQLDVGHILWCGRVVRVERAHRVRVVRSVQ
Ga0318515_105839892	3300031572	Soil	MKIAVVVRQLDRDHIVWRGRVVRVERAHRIRVVRGVQKMLDVGRHGVIEFGHIWFVAHDH
Ga0310915_100288815	3300031573	Soil	MKIAVMVRQLDLGHILWCDRVVRVERAHRVRVVRGVQKMPNVGNGVIGFDH
Ga0310915_101769533	3300031573	Soil	MKIVVMVRQLDLGHILWCGRVVRVERAHRAHRVRVVR
Ga0310915_109330651	3300031573	Soil	MGYQDRLALDYLSKMKIAVMVRQLDLDILWCGRVVRVERAHRVRVVRSVQKMPDVGNGVIGFDHVRFHVRD
Ga0318555_104309631	3300031640	Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDFV
Ga0318574_102857001	3300031680	Soil	MVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDFVNGVTG
Ga0306917_108358951	3300031719	Soil	MKIAVMVRQLDLGHILWCDRVVRVERAHRVRVVRGVQKMPDVGNGVIGFDHVRFHVRDLV
Ga0306917_113725162	3300031719	Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGSGVIGFDHV
Ga0318493_104915542	3300031723	Soil	MKIAVVVRQLDRDHIVWRGRVVRVERAHRICVVRGVQKMLDVGRHGVIEFGHIW
Ga0306918_111297912	3300031744	Soil	MEGDASRSTTVALDYLSKMKIAVMVRQLDLGHILWCGRVVRVECAHRVRVVRGVQKMLDVGNGVIGFDHVRFHVRDLVM
Ga0318502_102027891	3300031747	Soil	MKIALVVRQLHLGHILRCGRVVRVKHAHRIRVVRGVQKMLDVGRHGVIDFGH
Ga0318537_103678281	3300031763	Soil	TPISSKLLLSEMKIAVMVRQLDLGHILWCRRVVRVERAHRVRVVRSVQKMPDVGNGVIGFGYIAGL
Ga0318547_106662962	3300031781	Soil	MKITLMVRQLDLGHILWCGRVVRVERAHRVRVVRGVQ
Ga0318547_108959121	3300031781	Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGSGVIGFDHVRFH
Ga0318557_101541362	3300031795	Soil	MGYQDRYVNLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVQRAHRVRVVRSVQKMLDVGRCHS
Ga0318576_101543622	3300031796	Soil	MKIAVMVRQLDLGHILWCGRVVRVERARRVRVVRGVQKMPDVGNDVIGFDHVRFHVRD
Ga0318523_105406751	3300031798	Soil	MKIAVMVRQLDLGHILWWGRVVRVERAHRVRVVRGVQN
Ga0318565_100517482	3300031799	Soil	MKIALMVRQLDLGHILWCGPMVRVERDHRIRVVRGV
Ga0310917_104131161	3300031833	Soil	MKIAVMVRQLDLGHILWCGRVVRVERARRVRVVRGVQKMPDVGNDV
Ga0318544_102636322	3300031880	Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQK
Ga0306925_122619091	3300031890	Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDF
Ga0318536_105452801	3300031893	Soil	MKIAVVVRQLDRDHIVWRGRVVRVERAHRIRVVRGVQKMLDVGRHGVIEFGHIWFVAHD
Ga0306923_103153794	3300031910	Soil	MKIVVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGNG
Ga0306923_113529431	3300031910	Soil	MKIAVMVRQLDLGHILWWGRVVRVERAHRVRVVRGVQKMPDVGNGVIGFDHVRFHVRDLV
Ga0306923_116259072	3300031910	Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRS
Ga0306921_100935525	3300031912	Soil	MKIAVMVRQLDLGHILWCDRVVRVERAHRVRVVRGVQKMPNVGNGVIGFDHVRFHVRDL
Ga0306921_102423095	3300031912	Soil	MKIVVMVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDFG
Ga0306921_111736691	3300031912	Soil	MKIAVMVRQLDLGHILWWGRVVRVERAHRVRVVRGVQKMPDVGNGVIGF
Ga0306921_111760661	3300031912	Soil	MKISVVVRQLDRGHILWCGRVVRVERAHRIRIVRGVQKMLDVGGHG
Ga0310910_109980041	3300031946	Soil	MGYQDRLRGLALAYLSKMKIAMMVRQLDHRHILWCGRVVWVERAPGVRVVRGVQKMPD
Ga0306926_110467811	3300031954	Soil	MKISVVVRQLDRGHILWCGRVVRVERAHRIRIVRGVQKMLDVGGHGV
Ga0306926_127454711	3300031954	Soil	MKIAVMVRQLDLGYVLWCGRVIRVERAHRVRVVRGVQKMPDVGNGVIGFD
Ga0318530_104257701	3300031959	Soil	MKIAVVVRQLDRDHIVWRGRVVRVERAHRIRVVRGVQK
Ga0318569_105115821	3300032010	Soil	MKIAVMVRQLDLGHILWCGRVVRVERAHRVRVVRGVQKMPDVGNGVIGFDHV
Ga0310911_105990182	3300032035	Soil	LVRTPSEFLLSKMKIAVVVRQLDRGHILWCGRVVRVERAHGIRVV
Ga0318545_103658611	3300032042	Soil	MKIAVMVRQLDLGHILWCGRVVRVERARRVRVVRGVQKMPDVGNDVIGFDHVRFHVRDLVMAF
Ga0318558_106957841	3300032044	Soil	MKIAVMVRQLDLGYVLWCGRVIRVERAHRVRVVRGVQKMPDVGNGVIGFDHVRF
Ga0318532_101659792	3300032051	Soil	MKIALVVRQLDLGHILWCGRVVRVERAHRVRVVRSVQKMPDVGN
Ga0318532_103601282	3300032051	Soil	VNLALDYLSKMKIAVMVRQLDLGHILWCGRVVRVQRAHRVRVVRSVQKMLDVGRCH
Ga0306924_102490541	3300032076	Soil	MKIAVMVRQLDLGYVLWCGRVIRVERAHRVRVVRGVQKMPDVGNGVIGFDHVRFHVRDLVMAF
Ga0306920_1001415947	3300032261	Soil	MKIAVMVRQLDLGHILWRGRVVRVERAHRVRVVRGVQKMPDVGNGV
Ga0306920_1018691751	3300032261	Soil	GHILWCRRVVRVERAHRVRVVRSVQKMPDVGNGVIGFGYIAGL
Ga0306920_1020138371	3300032261	Soil	MVRQLTLVIYLWCGRVVRVERAHRVRVVRGVQKMPDV
Ga0306920_1029734251	3300032261	Soil	MRYQDRLALDYLSKMKIAVMVRQLDLGHIVWCGRVVRVERAHRVRVVRRVQKMPDVGSGVIGFDHVRFHVRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096407

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences