Metagenome / Metatranscriptome Family F096397

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096397
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	70 residues
Representative Sequence	MHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQDGHERRRGLILRALSPPR
Number of Associated Samples	69
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.92 %
% of genes near scaffold ends (potentially truncated)	52.88 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.654 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.769 % of family members)
Environment Ontology (ENVO)	Unclassified (87.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.33% β-sheet: 0.00% Coil/Unstructured: 32.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
a.137.10.1: Stathmin	d3ryce1	3ryc	0.87067
a.114.1.1: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	d1f5na1	1f5n	0.85249
a.238.1.1: BAR domain	d2d4ca1	2d4c	0.82813
a.238.1.0: automated matches	d4atma_	4atm	0.82433
a.238.1.1: BAR domain	d1urua_	1uru	0.79845

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00313	CSD	5.77
PF09140	MipZ	4.81
PF00005	ABC_tran	3.85
PF00884	Sulfatase	3.85
PF02796	HTH_7	3.85
PF13467	RHH_4	0.96
PF13191	AAA_16	0.96
PF02705	K_trans	0.96
PF00239	Resolvase	0.96
PF08734	GYD	0.96
PF13181	TPR_8	0.96
PF00571	CBS	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	4.81
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.96
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.96
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.96
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
All Organisms	root	All Organisms	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
cellular organisms	root	All Organisms → cellular organisms	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.15 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	18.27 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	17.31 %
Dietziaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	3.85 %
Dietzia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia	2.88 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.65 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	3.85 %
Dietzia alimentaria	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → Dietzia alimentaria	2.88 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005363\|Ga0008090_15128244	Not Available	671	Open in IMG/M
3300005764\|Ga0066903_100951566	Not Available	1562	Open in IMG/M
3300005764\|Ga0066903_101400858	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300005764\|Ga0066903_103137349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	894	Open in IMG/M
3300005764\|Ga0066903_103648869	Not Available	828	Open in IMG/M
3300010048\|Ga0126373_11188635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	829	Open in IMG/M
3300016319\|Ga0182033_11265913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300016319\|Ga0182033_12176045	Not Available	506	Open in IMG/M
3300016341\|Ga0182035_10726322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	867	Open in IMG/M
3300016341\|Ga0182035_10839742	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300016341\|Ga0182035_11466973	Not Available	613	Open in IMG/M
3300016357\|Ga0182032_10770394	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300016357\|Ga0182032_11994108	Not Available	509	Open in IMG/M
3300016371\|Ga0182034_11247173	Not Available	647	Open in IMG/M
3300016387\|Ga0182040_10695451	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300016387\|Ga0182040_10821028	Not Available	767	Open in IMG/M
3300016387\|Ga0182040_10963369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300016387\|Ga0182040_10994174	Not Available	699	Open in IMG/M
3300016404\|Ga0182037_11376794	Not Available	623	Open in IMG/M
3300016404\|Ga0182037_11701221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	562	Open in IMG/M
3300016422\|Ga0182039_10212552	Not Available	1551	Open in IMG/M
3300016422\|Ga0182039_11604027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300016445\|Ga0182038_10658500	Not Available	909	Open in IMG/M
3300021560\|Ga0126371_13826044	Not Available	507	Open in IMG/M
3300027003\|Ga0207722_1040868	Not Available	500	Open in IMG/M
3300027039\|Ga0207855_1008888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1447	Open in IMG/M
3300027330\|Ga0207777_1075131	Not Available	589	Open in IMG/M
3300027680\|Ga0207826_1012818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2276	Open in IMG/M
3300027680\|Ga0207826_1180626	Not Available	572	Open in IMG/M
3300027703\|Ga0207862_1002987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5042	Open in IMG/M
3300031543\|Ga0318516_10034867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2674	Open in IMG/M
3300031544\|Ga0318534_10207227	Not Available	1132	Open in IMG/M
3300031545\|Ga0318541_10177167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1176	Open in IMG/M
3300031545\|Ga0318541_10318092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → Dietzia alimentaria	868	Open in IMG/M
3300031546\|Ga0318538_10035855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2349	Open in IMG/M
3300031546\|Ga0318538_10458226	Not Available	691	Open in IMG/M
3300031546\|Ga0318538_10528763	Not Available	639	Open in IMG/M
3300031546\|Ga0318538_10559562	Not Available	620	Open in IMG/M
3300031561\|Ga0318528_10248383	Not Available	954	Open in IMG/M
3300031564\|Ga0318573_10343398	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300031573\|Ga0310915_10352770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1043	Open in IMG/M
3300031668\|Ga0318542_10151697	Not Available	1152	Open in IMG/M
3300031681\|Ga0318572_10701990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	602	Open in IMG/M
3300031713\|Ga0318496_10243907	Not Available	990	Open in IMG/M
3300031719\|Ga0306917_10225885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1427	Open in IMG/M
3300031719\|Ga0306917_10651779	Not Available	828	Open in IMG/M
3300031736\|Ga0318501_10302511	Not Available	854	Open in IMG/M
3300031744\|Ga0306918_10993738	Not Available	652	Open in IMG/M
3300031744\|Ga0306918_11338028	Not Available	550	Open in IMG/M
3300031765\|Ga0318554_10202440	Not Available	1130	Open in IMG/M
3300031768\|Ga0318509_10293286	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300031778\|Ga0318498_10232545	Not Available	833	Open in IMG/M
3300031781\|Ga0318547_10389362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	854	Open in IMG/M
3300031796\|Ga0318576_10236551	Not Available	861	Open in IMG/M
3300031819\|Ga0318568_10932348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	537	Open in IMG/M
3300031831\|Ga0318564_10450503	Not Available	561	Open in IMG/M
3300031833\|Ga0310917_10038053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2890	Open in IMG/M
3300031833\|Ga0310917_10217392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300031833\|Ga0310917_10592479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	753	Open in IMG/M
3300031833\|Ga0310917_10865154	Not Available	609	Open in IMG/M
3300031845\|Ga0318511_10188335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	914	Open in IMG/M
3300031879\|Ga0306919_10138606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1762	Open in IMG/M
3300031879\|Ga0306919_11038171	Not Available	626	Open in IMG/M
3300031890\|Ga0306925_10642511	Not Available	1116	Open in IMG/M
3300031890\|Ga0306925_11077964	Not Available	813	Open in IMG/M
3300031890\|Ga0306925_12081960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	532	Open in IMG/M
3300031893\|Ga0318536_10254144	Not Available	893	Open in IMG/M
3300031897\|Ga0318520_10590481	Not Available	690	Open in IMG/M
3300031910\|Ga0306923_10854603	Not Available	1000	Open in IMG/M
3300031912\|Ga0306921_12653206	Not Available	516	Open in IMG/M
3300031942\|Ga0310916_11254664	Not Available	611	Open in IMG/M
3300031946\|Ga0310910_10684314	Not Available	811	Open in IMG/M
3300031946\|Ga0310910_11335708	Not Available	553	Open in IMG/M
3300031947\|Ga0310909_10909956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300031954\|Ga0306926_10447656	Not Available	1591	Open in IMG/M
3300031954\|Ga0306926_10668395	Not Available	1263	Open in IMG/M
3300031959\|Ga0318530_10178031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	869	Open in IMG/M
3300032008\|Ga0318562_10183034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1212	Open in IMG/M
3300032010\|Ga0318569_10042886	Not Available	1934	Open in IMG/M
3300032025\|Ga0318507_10329318	Not Available	665	Open in IMG/M
3300032025\|Ga0318507_10385278	Not Available	611	Open in IMG/M
3300032035\|Ga0310911_10513062	Not Available	695	Open in IMG/M
3300032039\|Ga0318559_10282220	Not Available	770	Open in IMG/M
3300032041\|Ga0318549_10360880	Not Available	655	Open in IMG/M
3300032044\|Ga0318558_10225507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	919	Open in IMG/M
3300032044\|Ga0318558_10315031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	774	Open in IMG/M
3300032051\|Ga0318532_10242340	Not Available	640	Open in IMG/M
3300032055\|Ga0318575_10512999	Not Available	609	Open in IMG/M
3300032059\|Ga0318533_10558476	Not Available	839	Open in IMG/M
3300032059\|Ga0318533_10773708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300032060\|Ga0318505_10115322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → Dietzia alimentaria	1226	Open in IMG/M
3300032064\|Ga0318510_10294757	Not Available	675	Open in IMG/M
3300032066\|Ga0318514_10124630	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300032066\|Ga0318514_10325191	Not Available	814	Open in IMG/M
3300032066\|Ga0318514_10621536	Not Available	575	Open in IMG/M
3300032067\|Ga0318524_10203730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → Dietzia alimentaria	1011	Open in IMG/M
3300032076\|Ga0306924_10980089	Not Available	929	Open in IMG/M
3300032076\|Ga0306924_11862219	Not Available	625	Open in IMG/M
3300032090\|Ga0318518_10318303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	798	Open in IMG/M
3300032090\|Ga0318518_10668486	Not Available	529	Open in IMG/M
3300032091\|Ga0318577_10485688	Not Available	589	Open in IMG/M
3300032261\|Ga0306920_100842368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1344	Open in IMG/M
3300033289\|Ga0310914_10614885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	979	Open in IMG/M
3300033289\|Ga0310914_10906243	Not Available	781	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.38%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	87.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008090_151282442	3300005363	Tropical Rainforest Soil	MLRGMHRNALLRILADVEQRIAFCEAELADRHARLVELAGQNRREAIQAVAGLRTTQAGHVRRRGLILRALSRRR*
Ga0066903_1009515662	3300005764	Tropical Forest Soil	MHRNTLLHILADVQQRIALCGAEIADRHARLVERDRARQDREDIQVIAGLRITQEGHERRRELILRALSSPA*
Ga0066903_1014008581	3300005764	Tropical Forest Soil	MHRNALLRILADVEQRIAFCEAELADRHARLVELAGQNSWEAIQAVAGLRTTQAGHERRRGLILRALSRRR*
Ga0066903_1031373492	3300005764	Tropical Forest Soil	MHRNALLRILADVERRLALCEAELADRHARLVELDRAGQGRWDAIQAIAGLRSTQEGHERRRELILRALSPQRPS*
Ga0066903_1036488691	3300005764	Tropical Forest Soil	MHRNALLRILADVEQRLALCEAELADRRARLVEVADQNRWEAIQAIAGLRITQEGHQRRRGLILHALSPPR*
Ga0126373_111886352	3300010048	Tropical Forest Soil	MHRNALLRILADVEQRLALCEAELADRRARLDRVGQATREAIDAISGLRITQEGHERRRELILRALSPPR*
Ga0182033_112659132	3300016319	Soil	MHRNALLHILADVEQRLALCEAELADRHARLVELDRAGQDRWKAIQAIAGLSITQEGHGRRRELILRALSPPR
Ga0182033_121760451	3300016319	Soil	RRRRILRGMHRNALLRILADVEQRLALCEAEIADRHARLVGLDRAGQDRWEAGQAIVGLRTTQAGHERRRALILRALSPRR
Ga0182035_107263221	3300016341	Soil	MLRGMHRNALLRILANVEQRIAFCEAELADRHARLVELAGQNRWEAIQAIAGLRSTQEGHERRRELILRALSPQRPS
Ga0182035_108397422	3300016341	Soil	RRILRGMHRNALLRILPDVEQRLALREAELADRHARLVELAGQNRREAIQAVAGLRTTQAGHERRRGLILRALSRRR
Ga0182035_114669731	3300016341	Soil	MHRNALLRILADVEQRLALCETEIADWHARLVELDRAGQDREAIQAIAGLRTTQEGHERRRELILRALSPPR
Ga0182032_107703942	3300016357	Soil	LADVEQRLALCEAELAYRRARLDRAGQATREAIDAIAGLRTAQAAHERRRGLILRSISSS
Ga0182032_119941081	3300016357	Soil	MHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHLRRREMILRALSPPRP
Ga0182034_112471731	3300016371	Soil	MHRNALLRILADVEQRLALCEAELADRHARLVELDRAGQVRREAIVAIVGLRTTQAGHERRRGLILRALSPRR
Ga0182040_106954512	3300016387	Soil	MHRNALLRILADVEQRLALCETEIADWHARLVELDRAGQGRWDAIQAIAGLRSTQEGHERRRELILRALSPQRPS
Ga0182040_108210281	3300016387	Soil	MHRNALLHILADVEQRLALCEAELADRHARLVELDRADQDRWKAIQAIAGLSITKEGHGRRRELILRALSPPR
Ga0182040_109633691	3300016387	Soil	MHRNALLRILVDVEQRLALCEAELADRHARRVELERAGQVRWKAIQGIAGLRTTQAGHERRRGLILRALSAQR
Ga0182040_109941742	3300016387	Soil	PFCALANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHGRRREMILRALSPPRPAD
Ga0182037_113767942	3300016404	Soil	NALLRILADVEQRLALCEAELADRHARLVELDRADQDRWKAIQAIAGLSITQEGHGRRRELILRALSPPR
Ga0182037_117012212	3300016404	Soil	MHRNALLRILADVEQRLAFCEAEIADRHARLVELDRAGQDREAIQAIAGLRTTQEGHER
Ga0182039_102125522	3300016422	Soil	MHRNALLRMLADVEQRLALCEAELADRHARFVKLGRAGQDRWKAIQAIAGLRTTQAAHGRRREMILRALSPAPDLKSRAD
Ga0182039_116040272	3300016422	Soil	RGMHRNALLRILADVEQRLALCEAEVADRHARLVELDRAGQGRWEAIQAIAGLRITQEGHERRRGLILHALSPRR
Ga0182038_106585001	3300016445	Soil	RNRRRRILRGMHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQAGHERRRGLIL
Ga0126371_138260441	3300021560	Tropical Forest Soil	MHRNALLRILADVEQRLALCEAELADRRARLVEVADQNRWEAIQAIAGLRITQEGHQRRRGLILHALSPPREGIGAS
Ga0207722_10408681	3300027003	Tropical Forest Soil	MHRNALLRILADVEQRLALCEAELTDRHARLVELERAGRGREAIQAIAGLRTTQAGHERRRGLILRALSPRR
Ga0207855_10088882	3300027039	Tropical Forest Soil	MHRNALLRILADVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAGHERRRGLILRALSPRR
Ga0207777_10751312	3300027330	Tropical Forest Soil	MHRSALLRILADVEQRIALCEAELTDRHARLVELDRAGQDRWEASQAIAGLRIMQEGHERRRKLILRALPPPR
Ga0207826_10128183	3300027680	Tropical Forest Soil	MHRNALLRILADVEQRLALCEAELTDRHARLVELDRAGQDRWEASQAIAGLRIMQEGHERRRKLILRALPPPR
Ga0207826_11806262	3300027680	Tropical Forest Soil	RRRRILRGMHRNALLRILADVEQRLALCEAELADRHARLVELDRAGQVRREAIVAIVGLRTTQAGHERRRGLILRALSPRHRNFRATKL
Ga0207862_10029876	3300027703	Tropical Forest Soil	ALLRILADVEQRLALCEAELADRHARLVELDRAGQVRREAIVAIVGLRTTQAGHERRRGLILRALSPRHRNFRATKL
Ga0318516_100348676	3300031543	Soil	LLRILADVEQRLALCEAELADRHARFVELDEAIARLRTTQEGHARRRELILRGLR
Ga0318534_102072271	3300031544	Soil	RILRGMHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQAGHERRRGLIL
Ga0318541_101771673	3300031545	Soil	MHRNALLRILADVEQRLALCEAELADRHARFVELDEAIARLRTTQEGHARRRELILRGLR
Ga0318541_103180921	3300031545	Soil	LLHTLADVEQRLALCEAELAYRRARLDRAGQATREAIDAIAGLRTAQAAHERRRGLILRSISSSR
Ga0318538_100358556	3300031546	Soil	RILRGMHRNALLRILADVEQRLALCEAELADRHARFVELDEAIARLRTTQEGHARRRELILRGLR
Ga0318538_104582261	3300031546	Soil	LALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHGRRREMILRALSPPRPAD
Ga0318538_105287631	3300031546	Soil	MHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHLRRREM
Ga0318538_105595621	3300031546	Soil	MHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQAGHERRRGLIL
Ga0318528_102483832	3300031561	Soil	MHRNALLHTLADVEQRLALCEAELAYRRARLDRAGQATREAIDAIAGLRTAQAAHERRRGLILRSISSSR
Ga0318573_103433983	3300031564	Soil	NALLHILADVEQRLALCEAELADRHARLVELNRAGQDRWKAIQAIAGLSITQEGHGRRRELILRALSPPR
Ga0310915_103527702	3300031573	Soil	MHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHLRRREMILRALSPPRPAD
Ga0318542_101516972	3300031668	Soil	MHRNAFLHILADVEQRLALCEAELAYRRARLDRVGQATREAIDAIAGLRIMQAGHERRRGLILRSLSPSR
Ga0318572_107019901	3300031681	Soil	RNALLRILADVEQRLALCEAELADRHARFVELDEAIARLRTTQEGHARRRELILRGLR
Ga0318496_102439072	3300031713	Soil	MHRNAFLHILADVEQRLALCEAELAYRRARLDRVGQATREAIDAIAGLRITQAGHERRRGLILRSLSPSR
Ga0306917_102258853	3300031719	Soil	MHRSTLLSILADLEQRITFCEAELAYRGARLDRVGQATREAIDAIAGLRITQEGHERRRDLILRALPPPR
Ga0306917_106517791	3300031719	Soil	MHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQDGHERRRGLILRALSPPR
Ga0318501_103025111	3300031736	Soil	MHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHGRRREMILRALSPAPDLKSRAD
Ga0306918_109937381	3300031744	Soil	ALLHILADVEQRLALCEAELAYRRARLDRVGQATREAIVAIAGLRTAQAAHERRRGLILRSLSPSRWRD
Ga0306918_113380282	3300031744	Soil	DVEQRLALCEAELAYRRARLVDLDRAGQDRWKAIQAIAGLRITQEGHERRRKLILRALPPPR
Ga0318554_102024401	3300031765	Soil	MHRNALLRILADVEQRLAFCEAELADRRARLVELDRAGQHREAIQVIAGLRTTQEGHERRRELILRALSPPR
Ga0318509_102932863	3300031768	Soil	MHRNALLRILADVEQRLALCEAEIADRHARLVELDRAGQDREAIQVIAGLRTTQEGHERRRELILRALSPPR
Ga0318498_102325451	3300031778	Soil	MHRNALLHTLADVEQRLALCEAELAYRRARLDRAGQATREAIDAIAGLRTAQAAHERRRGLILRSIS
Ga0318547_103893622	3300031781	Soil	NKCRRILRGMHRNALLRILADVEQRLALCEAELADRHARFVELDEAIARLRTTQEGHARRRELILRGLR
Ga0318576_102365512	3300031796	Soil	RILRGMHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHLRRREMILRALSPPRPAD
Ga0318568_109323481	3300031819	Soil	PRNRSRRILRGMHRNALLRILADVEQRLALCEAELADRHARFVELDEAIARLRTTQEGHARRRELILRGLR
Ga0318564_104505031	3300031831	Soil	LRGMHRNALLRILADVEQRLALCEAEIADRHARLVELDRAGQDREAIQVIAGLRTTQEGHERRRELILRALSPPR
Ga0310917_100380534	3300031833	Soil	MHRNALLRILADVEQRLALCEAELADRHARFVELDEAIARLRTTQEGYARRRELILRGLR
Ga0310917_102173922	3300031833	Soil	MHRNALLRILADVEQRLALCETEIADWHARLVELDRAGQDREAIQVIAGLRTTQEGHERRRELILRALSPPR
Ga0310917_105924791	3300031833	Soil	NRRRRILRGMHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQDGHERRRGLILRALSPPR
Ga0310917_108651541	3300031833	Soil	MLADVEQRLALCEAELADRHARLVELDRADQDRWKAIQAIAGLSITQEGHGRRRELILRALSPSR
Ga0318511_101883352	3300031845	Soil	MHRNALLRILADVEQRLALCEAELADRHARFVELDEAIARLRTRQEGHARRRELILRGLR
Ga0306919_101386061	3300031879	Soil	MHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQAGHERRRGLILRALSPRH
Ga0306919_110381711	3300031879	Soil	MHRNALLRILADVEQRLALCEAEVADRHARLVELDRAGQGRWEAIQAIAGLRITQEGHERRRKLILRALPPPR
Ga0306925_106425113	3300031890	Soil	MHRNALLRILADVELRLALCEAELADRHARLVELAGQNRWEAIQAVAGLRTTQAGHERRRELILRALSPRH
Ga0306925_110779642	3300031890	Soil	VEQRLALCEAELADRHARLVELDRADQDRWKAIQAIAGLSITKEGHGRRRELILRALSPP
Ga0306925_120819602	3300031890	Soil	MHRNALLHILADVEQRLALCEAELAYRRARLDRVGQATREAIVAIAGLRTAQAAHERRRG
Ga0318536_102541442	3300031893	Soil	MHRNALLHILADVEQRLALCEAELAYRRARLDRAGQATREAIDAIAGLRTAQAAHERRRGLILRSISSSR
Ga0318520_105904812	3300031897	Soil	NRRRRILRGMHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHLRRREMILRALSPPRPAD
Ga0306923_108546031	3300031910	Soil	MHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHGRRREMILRALSPPRPAD
Ga0306921_126532061	3300031912	Soil	RIPADVEQRLALCEAELADRHARFVKLGRAGQDRWKAIQAIAGLRTTQAAHGRRREMILRALSPAPDLKSRAD
Ga0310916_112546641	3300031942	Soil	DVEQRLALCEAELADRHARLVELDRADQDRWKAIQAIAGLSITKEGHGRRRELILRALSPPR
Ga0310910_106843142	3300031946	Soil	MHRNALLHILADVEQRLALCEAELADRHARVVELDRAGQDRWKAIQAIAGLSITQEGHGRRRELILRALSPPR
Ga0310910_113357081	3300031946	Soil	DVEDRLALFEAELAYRRARLDRVGQATREAIVAIAGLRTAQAAHERRRGLILRSLSPSRWRD
Ga0310909_109099562	3300031947	Soil	MHRSTLLSILADLEQRITFCEAELAYRRARLDRVGQATREAIDAIAGLRITQVGHERGRDLILRALPPPPR
Ga0306926_104476562	3300031954	Soil	MHRNALLRILADVEQRLALCEAELADRHARLVELDRADQDRWKAIQAIAGLSITKEGHGRRRELILRALSPPR
Ga0306926_106683951	3300031954	Soil	MHRNAFLHILADVEQRLALCEAELAYRRARLDRVGQATREAIDAIAGLRITQAGHERR
Ga0318530_101780311	3300031959	Soil	MHRNALLRILANVEQRLALCEAELADRHARFVELDEAIARLRTTQEGHARRRELILRGLR
Ga0318562_101830341	3300032008	Soil	MHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHGRRREMIL
Ga0318569_100428861	3300032010	Soil	MHRNAFLHILADVEQRLALCEAELAYRRARLDRVGQATREAIDAIAGLRITQAGHERRRGLILRSLSP
Ga0318507_103293181	3300032025	Soil	RILRGMHRNALLRILADVEQRLALCEAEIADRHARLVELDRAGQHREAIQVIAGLRTTQEGHERRRELILRALSPPR
Ga0318507_103852781	3300032025	Soil	ADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQAGHERRRGLILRALSPRH
Ga0310911_105130622	3300032035	Soil	MHRNALLRILADVEQRLALCEAEIADRHARLVELDRAGRDREAIQVIAGLRTTQEGHERRRELILRALSPPR
Ga0318559_102822201	3300032039	Soil	MHRNALLRILADVEQRLALCEAEIADRHARLVELDRAGQDREAIQVIAGLRTTQEGHERRRE
Ga0318549_103608801	3300032041	Soil	MHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHLR
Ga0318558_102255073	3300032044	Soil	MHRNALLRILADVEQRLALCEAEIADRHARLVELDRAGQDREATQVIAGLRTTQEGHERRRELILRALSPAPDRKSRAD
Ga0318558_103150312	3300032044	Soil	VEQRLALCEAELADRHARFVELDEAIARLRTTQVGHARRRELILRGLR
Ga0318532_102423401	3300032051	Soil	RILRGMHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAVLRTTQAGHERRRGLIL
Ga0318575_105129991	3300032055	Soil	MHRNALLRILADVEQRLALCEAEIADWHARLVELDRAGQDREAIQVIAGLRTTQEGHERRRELILRALSPPR
Ga0318533_105584761	3300032059	Soil	RLALCEAELADRHARFVKLGRAGQDRWKAIQAIAGLRTTQAGHERRRGLIL
Ga0318533_107737083	3300032059	Soil	NSASLSARAARFCARYSRPRNRRGRILRGMHRSTLLSILADLEQRITFCEAELAYRGARLDRVGQATREAIDAIAGLRITQEGHERRRDLILRALPPPR
Ga0318505_101153222	3300032060	Soil	LHTLADVEQRLALCEAELAYRRARLDRAGQATREAIDAIAGLRTAQAAHERRRGLILRSISSSR
Ga0318510_102947571	3300032064	Soil	MHRNALLRILADVEQRLALCEAELADRNARLVELDRAGQDRWEANQAIAGLRTTQEGHERRRELILRALSPPR
Ga0318514_101246302	3300032066	Soil	MHRNALLHTLADVEQRLAFCEAELAYRRARLDRAGQATREAIDAIAGLRTAQAAHERRRGLILRSISSSR
Ga0318514_103251911	3300032066	Soil	RLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQAAHGRRREMILRALSPPRPA
Ga0318514_106215361	3300032066	Soil	MHRNALLRILADVEQRLALCEAELADRHARLVELERAGQDRWKAIQAIAGLRTTQAGHER
Ga0318524_102037301	3300032067	Soil	PRNRRRRILRGMHRNALLHTLADVEQRLALCEAELAYRRARLDRAGQATREAIDAIAGLRTAQAAHERRRGLILRSISSSR
Ga0306924_109800891	3300032076	Soil	MHRNALLRILANVEQRLALCEAELADRHARLVELYRAGQDTWEAIKAIAGLRTTQAAHGRRREMILRALSPPR
Ga0306924_118622191	3300032076	Soil	MHRNALLRIPADVEQRLALCEAELADRHARFVKLGRAGQDRWKAIQAIAGLRTTQAAHGRRREMILRALSPAPDLKSRAD
Ga0318518_103183031	3300032090	Soil	MHRNTLLSILAVLEQRITFCEAELAYRRARLDRVGQATREAIDAIAGLRITQEGHERRRD
Ga0318518_106684862	3300032090	Soil	MHRNALLRILADVEQRLALCEAEIADRHARLVELDRAGQDREATQVIAGLRTTQEGHERRRELILRALSPPR
Ga0318577_104856881	3300032091	Soil	LLRILADVEQRLALCEAELADRHARFVKLGRAGQDRWKAIQAIAGLRTTQAAHGRRREMILRALSPAPDLKSRAD
Ga0306920_1008423682	3300032261	Soil	MHRNALLRILADVEQRIALCEAEIADRHARLVESYRAGQAKREAIDAIAGLRTAQAAHGRRREMILRALSPPR
Ga0310914_106148853	3300033289	Soil	SSMLRGMHRNALLRILANVEQRIAFCEAELADRHARLVELAGQNRWEAIQAIAGLRSTQEGHERRRELILRALSPQRPS
Ga0310914_109062432	3300033289	Soil	MHRNALLHILADVEQRIAFCEAEIADRHARLVELDRAGQDREAIQVIAGLRTTQEGHERRRELILRALSPPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096397

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences