Metagenome / Metatranscriptome Family F096381

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096381
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	99 residues
Representative Sequence	WNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Number of Associated Samples	71
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.423 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (57.692 % of family members)
Environment Ontology (ENVO)	Unclassified (82.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (57.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.91% β-sheet: 14.73% Coil/Unstructured: 57.36%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00296	Bac_luciferase	63.46
PF00903	Glyoxalase	1.92
PF08439	Peptidase_M3_N	1.92

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	63.46
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	1.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.42 %
Unclassified	root	N/A	10.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.42 %
Unclassified	root	N/A	10.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.42 %
Unclassified	root	N/A	10.58 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.96 %
Unclassified	root	N/A	10.58 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.00 %
Unclassified	root	N/A	10.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	42.31 %
Unclassified	root	N/A	10.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.31 %
Unclassified	root	N/A	10.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.81 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003219\|JGI26341J46601_10124343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300010398\|Ga0126383_13532842	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300011120\|Ga0150983_15547575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300016294\|Ga0182041_10070570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2455	Open in IMG/M
3300016319\|Ga0182033_11582783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300016319\|Ga0182033_12050996	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300016319\|Ga0182033_12135388	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300016341\|Ga0182035_11878963	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300016341\|Ga0182035_12068275	Not Available	517	Open in IMG/M
3300016357\|Ga0182032_10124539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1865	Open in IMG/M
3300016357\|Ga0182032_10250178	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300016371\|Ga0182034_10310815	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300016371\|Ga0182034_10531650	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300016387\|Ga0182040_11806934	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300016387\|Ga0182040_11864086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300016404\|Ga0182037_10055044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2680	Open in IMG/M
3300016404\|Ga0182037_11735075	Not Available	557	Open in IMG/M
3300016422\|Ga0182039_10318849	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300016422\|Ga0182039_10679029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	906	Open in IMG/M
3300016422\|Ga0182039_12067911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300016445\|Ga0182038_10275225	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300016445\|Ga0182038_10747758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300017995\|Ga0187816_10060955	Not Available	1588	Open in IMG/M
3300021560\|Ga0126371_12727052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300022533\|Ga0242662_10200251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300022533\|Ga0242662_10270616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300022726\|Ga0242654_10150568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300022726\|Ga0242654_10419656	Not Available	517	Open in IMG/M
3300027039\|Ga0207855_1055464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300027824\|Ga0209040_10324980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300027824\|Ga0209040_10324981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300030969\|Ga0075394_12090313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300031446\|Ga0170820_11870314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300031446\|Ga0170820_14578482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300031469\|Ga0170819_17911872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300031543\|Ga0318516_10495835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300031544\|Ga0318534_10566340	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031544\|Ga0318534_10626761	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031545\|Ga0318541_10032726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2588	Open in IMG/M
3300031545\|Ga0318541_10215542	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300031561\|Ga0318528_10239566	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300031564\|Ga0318573_10093536	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300031564\|Ga0318573_10273911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300031572\|Ga0318515_10148622	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300031640\|Ga0318555_10746135	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031668\|Ga0318542_10163715	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300031677\|Ga0307480_1017105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300031679\|Ga0318561_10100917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1516	Open in IMG/M
3300031680\|Ga0318574_10181713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1204	Open in IMG/M
3300031681\|Ga0318572_10685090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300031682\|Ga0318560_10032111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2491	Open in IMG/M
3300031723\|Ga0318493_10404532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300031724\|Ga0318500_10644270	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031744\|Ga0306918_10283351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1273	Open in IMG/M
3300031747\|Ga0318502_10994891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031751\|Ga0318494_10496662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300031751\|Ga0318494_10781947	Not Available	559	Open in IMG/M
3300031763\|Ga0318537_10066309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1321	Open in IMG/M
3300031763\|Ga0318537_10170246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300031764\|Ga0318535_10436071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	584	Open in IMG/M
3300031769\|Ga0318526_10126227	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031771\|Ga0318546_10595339	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031771\|Ga0318546_11202801	Not Available	532	Open in IMG/M
3300031795\|Ga0318557_10037574	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300031795\|Ga0318557_10255441	Not Available	803	Open in IMG/M
3300031796\|Ga0318576_10077007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1492	Open in IMG/M
3300031796\|Ga0318576_10466466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300031796\|Ga0318576_10581650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300031805\|Ga0318497_10632990	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031831\|Ga0318564_10388347	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031846\|Ga0318512_10158897	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300031879\|Ga0306919_10307337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1205	Open in IMG/M
3300031879\|Ga0306919_11387076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300031890\|Ga0306925_10762182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1007	Open in IMG/M
3300031897\|Ga0318520_10340813	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031912\|Ga0306921_10137877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2849	Open in IMG/M
3300031912\|Ga0306921_10152821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2702	Open in IMG/M
3300031912\|Ga0306921_10658667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1206	Open in IMG/M
3300031912\|Ga0306921_11303788	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031941\|Ga0310912_10290903	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300031941\|Ga0310912_10531571	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300031942\|Ga0310916_10019497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4764	Open in IMG/M
3300031954\|Ga0306926_10805392	Not Available	1132	Open in IMG/M
3300031981\|Ga0318531_10149409	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300031981\|Ga0318531_10380142	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300032001\|Ga0306922_11167435	Not Available	785	Open in IMG/M
3300032001\|Ga0306922_12268179	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300032035\|Ga0310911_10632782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300032039\|Ga0318559_10302851	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300032039\|Ga0318559_10464180	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300032041\|Ga0318549_10585732	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300032044\|Ga0318558_10334731	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300032054\|Ga0318570_10048488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1755	Open in IMG/M
3300032055\|Ga0318575_10267187	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300032055\|Ga0318575_10691022	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300032059\|Ga0318533_10323453	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300032060\|Ga0318505_10572466	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300032060\|Ga0318505_10588922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300032063\|Ga0318504_10552376	Not Available	552	Open in IMG/M
3300032064\|Ga0318510_10330561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300032261\|Ga0306920_101866434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300033289\|Ga0310914_10632843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	963	Open in IMG/M
3300033290\|Ga0318519_10725396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.15%
Aquatic	Environmental → Aquatic	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.15%
Freshwater	Environmental → Aquatic → Freshwater	3.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.85%
Loam	Environmental → Terrestrial → Soil → Loam	1.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	91.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	57.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031677	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26341J46601_101243431	3300003219	Bog Forest Soil	ERGWNAARDSAGNPLQFVQIRRDEITCDAGCSHVEEFAAILPESELRASPDGLSVTFLSPSGDGKTIVISGDRIAAQLAAIDARRNPAEPAAARAGPPG*
Ga0136449_1043498121	3300010379	Peatlands Soil	HISHDEISCAPACSYAEEFAATIPDSVLRASPGGLSVTFTAGSGDEKTVLVSGDQITAQLAAVDASRNPVQPAAALAVPAPGE*
Ga0126383_135328421	3300010398	Tropical Forest Soil	HDEISCDAGCSYVEEFAANLPESTLRTSPDGLTVTFSARSGDEKTIVLPGDRITAQLAAIDASRISAQPVAAERSTAH*
Ga0150983_155475753	3300011120	Forest Soil	RLYVSDSYFGPERGWSAARDSHGRPLAFVPVSHDEITCDTGCSYVEEFAAALPEGDLRANPNGLAVTFAARSGDEKTVLVSGERITTQLAAVDARRNPTPPVAAIGITPP*
Ga0182041_100705703	3300016294	Soil	DSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0182033_115827832	3300016319	Soil	RSFVDRRTGEAAHQLYVTDSYFGAERDWNAARDSAGISLPFVAIGHDEISCGAGCSYVEEFAANLPENMLQASPDGLAVTFLSRSGDEMTIVVPHDRMTAQFAAIDARRASAQPVALGAQPVAAERSAAH
Ga0182033_120509962	3300016319	Soil	PLLFVAIGQDEISCGAGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERVTAQLAVIDATRSPAPTARSAQPVAAERSVAH
Ga0182033_121353882	3300016319	Soil	DEITCDAGCSYVEEFAANLPESVLRASPDGLAITFSSRSGDKKTIVVPGDRITAQLAVIDATRSSALPAAESDQPVAAERLVAH
Ga0182035_118789631	3300016341	Soil	DEISCDAGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERVTAQLAAIDATRSPAPTARSAQPLAAERSVAH
Ga0182035_120682752	3300016341	Soil	DGAPALCNRQLFRRRARLERRRDSAGISLPFVAIGHDEISCGAGCSYVEEFAANLPENMLQASPDGLAVTFLSRSGDEMTIVVPHDRITAQFAAIDARRASAQPVALGAQPVAAERSAAH
Ga0182032_101245392	3300016357	Soil	VTDSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0182032_102501784	3300016357	Soil	VTDSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFRSPSGDEKTIVISGDRIAAQLAATDAKRSPAEPAAARAGPARPG
Ga0182034_103108151	3300016371	Soil	PLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0182034_105316502	3300016371	Soil	PLQFVQISHDEISCDAGCSYVEEFAAILLESKLRASPGGLAVTFLSPSGDEKTIVISGDRIAAQLAAIDARRTLTEPAAVGAQPVAAERSPTH
Ga0182040_118069341	3300016387	Soil	DSYFGAERGWSAARDSTGATLPFVAIGHDEISCDAGCSYVEEFAANLPESVLRTSPDGLAVTFSARSGDKKTIVVPGDRITAQLAAIEATRTLAPPAARSAQPVAVERSIAR
Ga0182040_118640861	3300016387	Soil	DSAGNPLRFVQISHDEISCDLGCSNVEEFAAILPESKLRASPGGLSVTFLSPSGAEKTIVISGDTIAAQLAAIAARRNLVVPAAARAGPAPPG
Ga0182037_100550443	3300016404	Soil	GCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0182037_117350751	3300016404	Soil	ERGWNAARDSTGASLPFIAIADDEITCDAGCSYVEEFAAKLPETKLRASSADLAITFSSRSGDEKRIVVPAEQITAQLAAIDLKRSPPRPVSASGTASP
Ga0182039_103188491	3300016422	Soil	GAALPFVAIGHDEISCDAGCAYVEEFAANLPESLIRASPKGLAVTFSSRSGDKKTIVVPGDRITAQLAAIDATRTPAPPAARSAQPVAAEREVAH
Ga0182039_106790293	3300016422	Soil	TNCYCLRSFVDRRTGETAHQVYVSDSYFGSERGGNAARDSAGNPLRFVQISHDEISCDLGCSNVEEFAAILPESKLRASPGGLSVTFLSPSGAEKTIVISGDTIAAQLAAIAARRNLVVPAAARAGPAPPG
Ga0182039_120679111	3300016422	Soil	AERGWNAARDSTGTPLSFVAIGRDEISCEAGCAYVEEFAAKLPESTLRASPDGLAVTFSSRSGEEKAIAVPGKRITAQLAA
Ga0182038_102752251	3300016445	Soil	YFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFRSPSGDEKTIVISGDRIAAQLAATDAKRSPAEPAAARAGPARPG
Ga0182038_107477581	3300016445	Soil	FGAERGWNSAHDGAGAPLPFVAIGHDEITCDTGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERVTAQLAAIDATRSPAPTARSAQPLAAERSVAH
Ga0187816_100609554	3300017995	Freshwater Sediment	SYFGAERGWNMARDSAGSPLQFVPISSDEISCDAGCSYVEEFAAILPESELRARPDGLAVKFLSSSGDEKTIVISGDWIAAQLAAIDARRNPAEPAAARAGPPG
Ga0126371_127270522	3300021560	Tropical Forest Soil	DWNAARDSSGAPLLFVAIGHDEITCDAGCSYAEEFAAKLPESVLRKSPNGLAVTFSSRSGDQKTIVVPAALIATQLAAIDARRAPARPIAASGITSR
Ga0242662_102002512	3300022533	Soil	APLSFVAIGRDQISCDAGCSYVEEFAAKLPESALRASPDGRAVTFSSRSSDQKTIAVPGERITAQLAAFDARRNSAQPVAAFRTTPP
Ga0242662_102706161	3300022533	Soil	SYFGPERGWSAARDSHGRPLAFVPVSHDEITCDTGCSYVEEFAAALPEGDLRANPNGLAVTFAARSGDEKTVLVSGERITTQLAAVDARRNPTPPVAAIGITPP
Ga0242654_101505682	3300022726	Soil	VSDSYFGPERGWNAARDSRSRALAFVPVSHDEITCDTGCSYVEEFAAALPEGDLRANPNGLAVTFAARSGDEKTVLVSGERITTQLAAVDARRNPTQPVAAIGITPP
Ga0242654_104196561	3300022726	Soil	NAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFRSPSGDEKTIVISGDRIAAQLAATDAKRSPAEPASARAGPAPPG
Ga0207855_10554642	3300027039	Tropical Forest Soil	RGWNAARDSAGAPLPFVAIGRDEISCDGGCSYVEEFAAKLPESALRASPDGLAVTFLSRSGDEKTIVVSSQRITAQLAAIDTRRNPAQPLAASEIRP
Ga0209040_103249801	3300027824	Bog Forest Soil	AERGWNAARDSAGNPLQFVQIRRDEITCDAGCSHVEEFAAILPESELRASPDGLSVTFLSPSGDGKTIVISGDRIAAQLAAIDARRNPAEPAAARAGPPG
Ga0209040_103249811	3300027824	Bog Forest Soil	AERGWNAARDSAGNPLQFVQIRRDEITCDAGCSYAEEFAAILPESELRASPDGLSVTFLSPSGDEKTIVIPGDRIAAQLAAIDARRNPVEPAAARAGPLG
Ga0075394_120903132	3300030969	Soil	DSYFGAERGWNAARDSTGASLPFVAIGDDEITCDAGCSYVEEFAAKLPDSTLRTSRADLAVTFSSRSGDVKTIVVLAEQLTAQLAAINAGHKPAQPIAASGTTSP
Ga0170820_118703141	3300031446	Forest Soil	GAPLAFIAIGQDEITCDAGCSYVEEFAAKLPESTLRVSHDGLAVTFSARSGDEKTIVVPAAQLAAQLAAIDARRTPAQPIAASGTRSP
Ga0170820_145784821	3300031446	Forest Soil	DSYFGAERDWNAARDSTGASLPFVAIGQDEITCDTGCSYVEEFAAKLPESTLRTRSAGLAVTFLSRSGDEKTIVVPAERITAQLAAIDARDTSAQPIAASGITSP
Ga0170819_179118721	3300031469	Forest Soil	APLAFIAIGQDEITCDAGCSYVEEFAAKLPESTLRASHDGLAVTFSARSGDEKTIVVPAEQLTAQLAAIDARRTPAQPIAASGTTSP
Ga0318516_104958351	3300031543	Soil	YVTDSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFRSPSGDEKTIVISGDRIAAQLAATDAKRSPAEPAAARAGPARPG
Ga0318534_105663401	3300031544	Soil	NAARDSTGAPLPFIAISHDEITCDAGCSYVEEFAAKLPDGTLRANTDGLTVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGGIEPVAAERSAAH
Ga0318534_106267612	3300031544	Soil	EFAADLPESTLRTTPDRLAVTFSARSGDKKIIVLAGDRITAQLAAIDATRSLVQPAAAGGQPVAAERSVAH
Ga0318541_100327263	3300031545	Soil	LYVTDSYFGAERGWNAARDSAGAQLPFIAISHDEITCDAGCSYVEEFAAKLPDGTLRANTDELAVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGSAEPVAAERSAAH
Ga0318541_102155421	3300031545	Soil	GWNAARDSAGAALPFVAIGHDEISCDAGCAYVEEFAANLPESLMRASPDRLAVTFSSRSGDKKTIVVPGERITAQLAAIDATRTPAPPAARSAQPVAAEREVAH
Ga0318528_102395662	3300031561	Soil	GWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGNAQPVAAERSVAH
Ga0318573_100935361	3300031564	Soil	WNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0318573_102739111	3300031564	Soil	TAHQLYVTDSYFGAERDWNAARDSAGISLPFVAIGHDEISCDAGCSYVEEFAANLPENMLQASPDGLAVTFLSRSGDEMTIVVPHDRITAQFAAIDARRASAQPVALGAQPVAAERSAAH
Ga0318515_101486222	3300031572	Soil	SAGSPLQFVQISHDEISCDAGCSYVEEFAAILLESKLRASPGGLAVTFLSPSGDEKTIVISGDRIAAQLAAIDARRTLTEPAAVGAQPVAAERSPTH
Ga0318555_107461352	3300031640	Soil	ANLPESLMRASPDRLAVIFSSRSGDKKTIVVPGDRITAQLAAVDATRTRAPSASGSAQPVAAKRSVAH
Ga0318542_101637151	3300031668	Soil	DEITCDAGCSYVEEFAAKLPDGTLRANTDGLTVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGWGVEPVAAKRSVAH
Ga0307480_10171051	3300031677	Hardwood Forest Soil	GAERGWNAARDNAGVPLAFIAIGQDEITCDAGCSYVEEFAAKLPESALRASPDGLAVTFSARSGDKKTIVVPAEQLAAQLAAIDARRTPAQPIAASGTTSP
Ga0318561_101009174	3300031679	Soil	DSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFRSPSGDEKTIVISGDRIAAQLAATDAKRSPAEPAAARAGPARPG
Ga0318574_101817132	3300031680	Soil	LYVTDSYFGAERGWNAARDSAGAQLPFIAISHDEITCDAGCSYVEEFAAKLPDGTLRANTDELAVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGWGVEPVAAKRSVAH
Ga0318572_106850901	3300031681	Soil	ERDWSAARNSAGSPLQFVKISHDEISCDAGCSYVEEFAAILPESELRASPGGLAVTFISPSGDEKTIVISGDRIAAQLAAIDARRGPVEPAAARAGPPG
Ga0318560_100321113	3300031682	Soil	YFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0318493_104045321	3300031723	Soil	SGAERGWNAARDSTGAALPFVPIGRNEISCDAGCSYAEEFAANLPESALRTSLDGLAVTFSSSSGDEKTILISGARIAAQLAAVDARGNPVQPAAAFGMTSE
Ga0318500_106442701	3300031724	Soil	VAIGQDEISCGAGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERVTAQLAAIDATRSPAPTARSAQPLAAERSVAH
Ga0306918_102833512	3300031744	Soil	ERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0318502_109948911	3300031747	Soil	YFGAERGWNAARDSAGGPLPFVAIGHDEISCDAGCAYVEEFAANLPESLMRASPDRLAVTFSSRSGDKKTIVVPGERITAQLAAIDATRTPAPPAARSAQPVAAEREVAH
Ga0318494_104966621	3300031751	Soil	YFGAERGWNAARDSAGSPLQFVQISHDEISCDAGCSYVEEFAAILLESKLRASPGGLAVTFLSPSGDEKTIVISGDRIAAQLAAIDARRTLTEPAAVGAQPVAAERSPTH
Ga0318494_107819472	3300031751	Soil	SAARDSAGSPLQFVKISHDEISCDAGCSYVEEFAAILPESELRASPGGLAVTFISPSGDEKTIVISGDRIAAQLAAIDAKRGPVEPAAARAGPPG
Ga0318537_100663092	3300031763	Soil	LYVSDSYFGAERGWNAARDSAGSPLQFVQISHDEISCDAGCSYVEEFAAILLESKLRASPGGLAVTFLSPSGDEKTIVISGDRIAAQLAAIDARRTLTEPAAVGAQPVAAERSPTH
Ga0318537_101702461	3300031763	Soil	GWNAARDSTGAALPFVPIGRNEISCDAGCSYAEEFAANLPESALRTSLDGLAVTFSSSSGDEKTILISGARIAAQLAAVDARGNPVQPAAAFGMTSE
Ga0318535_104360711	3300031764	Soil	QDEISCDAGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERITAQLAAIDATRTPAPPAARSAQPVAAEREVAH
Ga0318526_101262271	3300031769	Soil	QFVKISHDEISCDAGCSYVEEFAAILPESELRASPGGLAVTFLSPSGDEKTIVISGDRIAAQLAAIDARRTLTEPAAVGAQPVAAERSPTH
Ga0318546_105953391	3300031771	Soil	SCDAGCAYVEEFAANLPESLMRASPDRLAVIFSSRSGDKKTIVVPGDRITAQLAAVDATRTRAPSASGSAQPVAAKRSVAH
Ga0318546_112028011	3300031771	Soil	FIAISHDEITCDAGCSYVEEFAAKLPDGTLRANTDGLTVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGWGVEPVAAKRSVAH
Ga0318557_100375741	3300031795	Soil	AARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFRSPSGDEKTIVISGDRIAAQLAATDAKRSPAEPAAARAGPARPG
Ga0318557_102554412	3300031795	Soil	RDSAGSPLQFVKISHDEISCDAGCSYVEEFAAILPESELRASPGGLAVTFISPSGDEKTIVISGDRIAAQLAAIDARRGPVEPAAARAGPPG
Ga0318576_100770074	3300031796	Soil	ERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFRSPSGDEKTIVISGDRIAAQLAATDAKRSPAEPAAARAGPARPG
Ga0318576_104664662	3300031796	Soil	LYVTDSYFGAERGWNTARDSVGAPLLFVAIGQDEISCGAGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERVTAQLAAIDATRSPAPTARSAQPLAAERSVAH
Ga0318576_105816502	3300031796	Soil	FGAERGWNTARDSTGATLPFVAIGHDEISCDAGCSYVEEFAANLPESTLRTSPDRLAVTFSARSGDKKIIVVAGDRITAQLAAIDATRSLVQPAAAGGQPVAAERSVAH
Ga0318497_106329902	3300031805	Soil	NRAGDGAGAPLPFVAIGHDEISCDASCSYVEEFAANLPESTLRASPDGLAVTFSSRSGDEKTIVVPGERITAQLAAVDGRRRFPVPPAIAGAQPVAAERPAAH
Ga0318564_103883471	3300031831	Soil	QGTARDSAGSPLQFVQISHDEISCDAGCSYVEEFAAILLESKLRASPGGLAVTFLSPSGDEKTIVISGDRIAAQLAAIDARRTLTEPAAVGAQPVAAERSPTH
Ga0318512_101588971	3300031846	Soil	EITCDAGCSYVEEFAAKLPDSTLRASPADLAVTFSSRSGDEKTTVVPAAQITAQLTAIDARRTFAEPAAADGQPIAVKRSAAH
Ga0306919_103073372	3300031879	Soil	VTDSYFGAERGWNAARDSAGAPLPFIAISHDEITCDEGCSYVEEFAAKLPDGTLRANTDGLTVTFSPRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGGIEPVAAERSAAH
Ga0306919_113870761	3300031879	Soil	ETNFYCLRSFVDRRTGETAHQVYVSDSYFGSERGWNAARDSAGSPLQFVQISHDEISCDLGCSNVEEFAAILPESKLRASPGGLSVTFLSPSGAEKTIVISGDTIAAQLAAIAARRNLVVPAAARAGPAPPG
Ga0306925_107621822	3300031890	Soil	YVTDSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0318520_103408131	3300031897	Soil	GAQLPFIAISHDEITCDAGCSYVEEFAAKLPDGTLRANTDELAVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGSAEPVAAERSAAH
Ga0306921_101378773	3300031912	Soil	DAGCSYVEEFAANLPESTLRTTPDRLAVTFSARSGDKKIIVVAGDRITAQLAAIDATRSLVQPAAAGGQPVAAERSVAH
Ga0306921_101528211	3300031912	Soil	NFYCLRSFVDRRTGETAYQLYVTDSYFGAERGWNAARDSAGAALPFVAIGQDEISCDAGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERVTAQLVAIDATRSLAPAARPACCGGAIGRSLNEIR
Ga0306921_106586672	3300031912	Soil	RRTGETAHQIYVTDSYFGAERGWNAARDSAGGPLPFVAIGHDEISCDAGCAYVEEFAANLPESLMRASPDRLAVIFSSRSGDKKTIVVPGDRITAQLAAVDATRTRAPSASGSAQPVAAKRSVAH
Ga0306921_113037882	3300031912	Soil	GHDEITCDTGCSYVEEFAANLPESLIRASPKGLAVTFSSRSGDKKTIVVPGDRITAQLAAIDATRTPPRPAAGSVRPVAAERSVAH
Ga0310912_102909031	3300031941	Soil	RGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0310912_105315712	3300031941	Soil	VEEFAANLPESVLRASPDGLAITFSSRSGDKKTIVVPGDRIIAQLAVIDATRSSALPAAESDQPVAAERLVAH
Ga0310916_100194974	3300031942	Soil	SYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0306926_108053923	3300031954	Soil	RGWNAARDSAGSPLQFVQISHDEISCDAGCSYVEEFAAILPESKLQASPGGLSVTFLSPSGAEKTIVISGDRIAAQLAAIAARRNLVEPAAARAGPAPPG
Ga0318531_101494091	3300031981	Soil	VEEFAANLPESLLRSSLKGLAVTFSARSGGVKTIVVPGDRITAQLAAVDARRTLAAAGSAQPVAAERSVAH
Ga0318531_103801421	3300031981	Soil	ISHDEITCDEGCSYVEEFAAKLPDGTLRANTDGLTVTFSPRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGGIEPVAAERSAAH
Ga0306922_111674351	3300032001	Soil	SAGSPLQFVKISHDEISCDAGCSYVEEFAAILPESELRASPGGLAVTFISPSGDEKTIVISGDRIAAQLAAIDARRGPVEPAAARAGPPG
Ga0306922_122681792	3300032001	Soil	VGAPLPFVAIGQDEISCDAGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERVTAQLAAIDATRSPAPTARSAQPLAAERSVAH
Ga0310911_106327822	3300032035	Soil	RGWNAARDSAGAPLPFIAISHDEITCDEGCSYVEEFAAKLPDGTLRANTDGLTVTFSPRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGGIEPVAAERSAAH
Ga0318559_103028512	3300032039	Soil	PESLMRGSPDRLAVIFSSRSGDKKTIVVPGDRITAQLAAVDATRTRAPSASGSAQPVAAKRSVAH
Ga0318559_104641802	3300032039	Soil	PESVLRTSPDGLAVTFSARSGDKKTIVVPGDRITAQLAAIEATRTLAPPAARSAQPVAVERSIAR
Ga0318549_105857321	3300032041	Soil	WNAARDSAGAPLPFIAISHDEITCDEGCSYVEEFAAKLPDGTLRANTDELAVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGGIEPVAAERSAAH
Ga0318558_103347312	3300032044	Soil	FIAIIHDEITCDAGCAYVEEFAAKLSDGTLRANTDGLTVTFSSRSGDEKTIVVPGARIAAQLAAVDAKRKLAQPASGGIEPVAAKQSAAH
Ga0318570_100484881	3300032054	Soil	WNAARDTAGTSLPFVAIGHDEISCDAGCSYVEEFAANLPENMLQASPDGLAVTFLSRSGDEMTIVVPHDRITAQFAAIDARRASAQPAALGAQPVAAERSAAH
Ga0318575_102671871	3300032055	Soil	VEEFAANLPESVLRTSPDGLAVTFSARSGDKKTIVVPGDRITAQLAAIEATRTLAPPAARSAQPVAVERSIAR
Ga0318575_106910221	3300032055	Soil	AERGWNTARDSVGAPLPFVAIGQDEISCDAGCSYVEEFAANLPESLMRASSDRLAVTFSSRSGDKKTIVVPGERVTAQLAAIDATRSPAPTARSAQPLAAERSVAH
Ga0318533_103234532	3300032059	Soil	DEISCGAGCSYVEEFAANLPENMLQASPDGLAVTFLSRSGDEMTIVVPHDRITAQFAAIDARRASAQPAALGAQPVAAERSAAH
Ga0318505_105724661	3300032060	Soil	GAPLPFIAISHDEITCDAGCSYVEEFAAKLPDGTLRANTDELAVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGSAEPVAAERSAAH
Ga0318505_105889221	3300032060	Soil	LYVTDSYFGAERGWNAARDSTGATLPFVAIGHDEISCDAGCSYVEEFAADLPESTLRTTPDRLAVTFSARSGDKKIIVLAGDRITAQLAAIDATRSLVQPAAAGGQPVAAERSVAH
Ga0318504_105523762	3300032063	Soil	SDSYFGAERDWSAARNSAGSPLQFVKISHDEISCDAGCSYVEEFAAILAESELRASPGGLAVTFISPSGDEKTIVISGDRIAAQLAAIDARRGPVEPAAARAGPPG
Ga0318510_103305612	3300032064	Soil	LYVTDSYFGAERGWNAARDSAGAALPFVAIGHDEISCDAGCAYVEEFAANLPESLMRASPDRLAVTFSSRSGDKKTIVVPGERITAQLAAIDATRTPAPPAARSAQPVAAEREVAH
Ga0306920_1018664342	3300032261	Soil	LGAERGWNAARDSTGASLPFIAIGDDEITCDAGCSYVEEFAAKLPETTLRRNSADLAITFLSRSGDEKTIVVPAEQITAQLAAIDLKRSLPPPIAASGTASP
Ga0310914_106328432	3300033289	Soil	YVTDSYFGAERGWNAARDSAGAQLPFIAISHDEITCDAGCSYVEEFAAKLPDGTLRANTDELAVTFSSRSGDEKTIVVPGARITAQLAAVDAKRKLAQPAGGSAEPVAAERSAAH
Ga0318519_107253961	3300033290	Soil	NFYCLRSFVDRRTGETAHQVYVSDSYFGSERGWNAARDSAGSPLQFVQISHDEISCDLGCSYVEEFAAILPESKLRASPGGLSVTFLSPSGAEKTIVISGDTIAAQLAAIAARRNLVVPAAARAGPAPPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096381

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences