Metagenome Family F096342

Basic Information
Family ID	F096342
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	54 residues
Representative Sequence	MTGFDLPTNYVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR
Number of Associated Samples	60
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	4.81 %
% of genes from short scaffolds (< 2000 bps)	4.81 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (95.192 % of family members)
Environment Ontology (ENVO)	Unclassified (96.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (96.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.45% β-sheet: 0.00% Coil/Unstructured: 54.55%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03732	Retrotrans_gag	4.81
PF10551	MULE	2.88

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300015294\|Ga0182126_1022079	Not Available	770	Open in IMG/M
3300015343\|Ga0182155_1135245	Not Available	608	Open in IMG/M
3300017411\|Ga0182208_1055548	Not Available	654	Open in IMG/M
3300017427\|Ga0182190_1056796	Not Available	722	Open in IMG/M
3300017438\|Ga0182191_1126813	Not Available	570	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	96.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	96.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	96.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	95.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0157374_114437901	3300013296	Miscanthus Rhizosphere	MTGFDLPTNFIEDLEALFKRTKAKLKKVLALESKDSQTRHSLTSVFEAMTDKTL*
Ga0157378_117829381	3300013297	Miscanthus Rhizosphere	MTGFDLPTNYVDDLEVLLKRTKAKLKKVPALESEDNQIR*SLTLEFEAMANKTLYEFSAPTMANIRTGPET
Ga0157378_127993001	3300013297	Miscanthus Rhizosphere	MIGFDLPTNYIDDPEALLKRTKAKLNKVSALESEDNQIRQSLTPEFEAMADKTFHEFSTPTMTN
Ga0182122_10289121	3300015267	Miscanthus Phyllosphere	TNYVEDPEALIRRTRAKLKKVSALESEDNQIRRSLTLDFEAMADKTL*
Ga0182122_10581962	3300015267	Miscanthus Phyllosphere	MTSFDLLTNYIEDQEILIRRTRAKLKKVPALKSEDNQIRRSLTLEFEAMANRTP*
Ga0182154_10013501	3300015268	Miscanthus Phyllosphere	VTGFDHLTNYVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR*
Ga0182154_10390781	3300015268	Miscanthus Phyllosphere	MTSFDLPTNYVEDLEALFRRTKAKLKKVSALESEDIQTRRSLTLVFEAMADKTP*
Ga0182113_10169531	3300015269	Miscanthus Phyllosphere	MTGFDLLTNYVEDPEALFRRTKAKLKKVLALELEDNQTRRSLTLVFEAMADKTLC*
Ga0182188_10216431	3300015274	Miscanthus Phyllosphere	MTGFDLLTNYVEDPEVLIRRTRAKLKKVLVLKSEDNHIRRSLTPARGDGGMH*
Ga0182188_10446901	3300015274	Miscanthus Phyllosphere	MTGFDLLTNYIEDPEALIRRTRAKLKKVPALESEDNQIRRSLTLDFEAMADKTL*
Ga0182172_10599581	3300015275	Miscanthus Phyllosphere	MTGFDFPTNYVEDPEALFRRAKAKLKKVSALESEDNQTRHSLTPVFEAM
Ga0182170_10171801	3300015276	Miscanthus Phyllosphere	MTGFDLLTNYVDDLEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR*
Ga0182170_10542281	3300015276	Miscanthus Phyllosphere	MTSFDLSTNYIDNPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR*
Ga0182128_10247632	3300015277	Miscanthus Phyllosphere	MTGFDLPTNYVEDLEALIRRTRAKLKKVLALEPEDNQIRQSLTPDFEAMADKTP*
Ga0182174_10605211	3300015279	Miscanthus Phyllosphere	MTGFDLSTNYVENLEALLRRTNAKLKKVLALESEDNQTRQSLTPVFNAC*
Ga0182160_10696661	3300015281	Miscanthus Phyllosphere	MTSFDLLTNYVDDLEALLKRTTAKLKKVSALESEDNHIR*SLTPEFEAM
Ga0182124_10225141	3300015282	Miscanthus Phyllosphere	MIIFNLPTNYVEDPEALIRRTRAKLKKVSASKPKDNRIRRSLTLEFDAMVDKT
Ga0182124_10496931	3300015282	Miscanthus Phyllosphere	MTGFDLPMNYIEDPQALFRRNKAKLKKVLALELEDNQIRWSSTPVFEAMADKTLCEFSAPTMANIHTR
Ga0182156_10126762	3300015283	Miscanthus Phyllosphere	MTGFDLPTNFIEDPEALFKRTKAKLKKVLALESKDSQTRRSLTSVFEAMTDKTL*
Ga0182156_10372821	3300015283	Miscanthus Phyllosphere	MIGFNLLTNYVEDPKALIRRTRAKLKKVSALESEDNQIRRSLTLDFEAMADKTL*
Ga0182156_10562381	3300015283	Miscanthus Phyllosphere	MIGFNLPTNFIDDPEALLKKTKAKLKRVPALESEDNRIRRSLTPKFEAMANKS
Ga0182176_10060102	3300015286	Miscanthus Phyllosphere	MTDFDLLTNYVDDPEALLKRTMAKLKKVLALESEDNQIRRSLTPEFEAR*
Ga0182171_10817061	3300015287	Miscanthus Phyllosphere	MTGFDLLTNYVEDLEALFRRTKAKLKKVSALESEDIQTRRSLTLVFEAMADKTLC*
Ga0182138_10134982	3300015289	Miscanthus Phyllosphere	MTSFDLLTNYVEDPEALIRRTKDKLKKVLALKSEDNHIRRSLTPEFEAMANRTP*
Ga0182138_10676161	3300015289	Miscanthus Phyllosphere	MTDFDLPTNHVEDPEALIRKTRAKLKKLSALKSKDNHIRRSLTPKFEAMAN
Ga0182125_10201191	3300015291	Miscanthus Phyllosphere	MTGFDLPTNYIEDLEALIKRTRAKLKTVLALEPKDNEIRCSLTPEFDAMANKTLHEFSAPTTTNI*
Ga0182141_10118951	3300015292	Miscanthus Phyllosphere	MTGFDLLMNYIEDPQALFRRNKVKLKKVLALESKDNQTRRSLTLLFKAMADK
Ga0182141_10574721	3300015292	Miscanthus Phyllosphere	MTSFDLLTNYVDDPEALLKRTKAKLKKVLALESEDNHIRRSLTPEFE
Ga0182126_10064191	3300015294	Miscanthus Phyllosphere	MTGFDLLTNYVDDLGALLKRTKAKLKKVLALESEDNQIRRRLTPEFEAR*
Ga0182126_10220791	3300015294	Miscanthus Phyllosphere	MTGFDLLTNYVQDLEALIRRTRAKLKKVPALKSEDNHIRRSLTPKFE
Ga0182126_10301353	3300015294	Miscanthus Phyllosphere	MTGFDLPTNYVEDPEALIRRTRAKLKKVSALESEDNQIRRSLTLDFEAMADKTL*
Ga0182126_10725711	3300015294	Miscanthus Phyllosphere	MTSFDLLTNYVDDLEAVLKRTKAKLKKVSALESEDDHIRRSLTSEFEAIANMTL
Ga0182175_10087091	3300015295	Miscanthus Phyllosphere	MTSFDLPTNYIENPEALIRRARAKLKKTPALKLEDNHIRRSLTPEFE
Ga0182175_10216142	3300015295	Miscanthus Phyllosphere	MTGFDLLTNYIDDPEALLKRTKSKLKKVLALESEDNQIRRSLTPEFEAR*
Ga0182175_10618211	3300015295	Miscanthus Phyllosphere	MTGIYLLTNYVEDPEALFRRTKAKLKKVSALESEDNQTRRSLTPVFKAMAD
Ga0182175_10800762	3300015295	Miscanthus Phyllosphere	TGFDLLTNYVEDPEALIRRTRAKLKKVLVLELEDNQIRRILTLEFEAMANKTLHEFSTPTIANT*
Ga0182157_10288801	3300015296	Miscanthus Phyllosphere	MTSFDLPTNYVEDPEALFSWTKAKLKKASALELEDNQPRRSLTPVFEAMADKTL
Ga0182157_10438941	3300015296	Miscanthus Phyllosphere	MTGFDLSTNYAEDPEALIRRTRAKLKKVPALESEDNQIRQSLTPKFEAMANKTLREFSAPTIANIR
Ga0182107_11052071	3300015299	Miscanthus Phyllosphere	MTDFDLLTNYVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPKFEAR*
Ga0182108_10726731	3300015300	Miscanthus Phyllosphere	MTGFDLLTNYIEDPKALFRRTKAKLKKVSALESEDNQTGCSLT*
Ga0182108_10834201	3300015300	Miscanthus Phyllosphere	MTGFDLPTNYVEDLEALIMKTRAKLKKVSALKSEDNHIRRSVTLEFEAMAN*
Ga0182112_10508651	3300015304	Miscanthus Phyllosphere	MTGFDLLTNYVEDLEAIRRTKAKLKKVLALESEDNQIRSLTPEFEAMANRTL
Ga0182158_10971381	3300015305	Miscanthus Phyllosphere	MTGFDLLTNYIDDLEALLKRTKAKLKKVLALESEDNQIR*SLTLEFEAMANKTLCVFSTLTIANIHTGPIVN
Ga0182140_10471751	3300015314	Miscanthus Phyllosphere	MTDFDLLTNYVDDPEALRKRTKAKLKKVLALESEDNQIRRSLTPEFEAR*
Ga0182110_10178272	3300015322	Miscanthus Phyllosphere	MTGFDLPTNYVEHPEALISWTRAKLKKVPALESEDNQIRQSLTPEFEAMANKTLH*
Ga0182110_10432862	3300015322	Miscanthus Phyllosphere	MIGFDLPTNYVEDLEALFRRTKAKLKKVSALESEDIQTRRSLTLVFEAMADKTP*
Ga0182110_10762122	3300015322	Miscanthus Phyllosphere	MTSFDLLTNYVENLEALLRRTKAKIKKVSALESEDNQTRQSLTPVFESMAEKTLHE
Ga0182187_11347121	3300015341	Miscanthus Phyllosphere	MTEFDLPTNYIEDLEALIRRTRSKLKKVLALESKDNKTRRSLTPVF*
Ga0182187_11903451	3300015341	Miscanthus Phyllosphere	MTSFDLPTNYVEDLEALIRRTRAKLKKVPALKSEDNNIRRSLTPEFEAMANRTLHEF
Ga0182155_11352451	3300015343	Miscanthus Phyllosphere	MTGFDLPMNYIEDPQALFRRNKAKLKKVLALESEDNQTRQSLTPVFKAMADKTLHEFSAPTTANIHTGP
Ga0182189_11082001	3300015344	Miscanthus Phyllosphere	MIGFDLPTNYIEDLEALSRRTKAKLKKVSALESEDNQTRRSLTPAFEAMVDKTLH*
Ga0182111_10711622	3300015345	Miscanthus Phyllosphere	MSDFDLLINYVEDPEALIRRTKAKLKKVLVSESEDNQTGHSLTPVFEAMAN*
Ga0182111_10770041	3300015345	Miscanthus Phyllosphere	MTGFELPTNYIENPEALLRKTRAKLNKVPATSSEVNQTRRSLTPDFEVL
Ga0182139_10571051	3300015346	Miscanthus Phyllosphere	MTSVDLPTNYVDDLEALIRRTRAKLKKVLALESKDNQTRRGLTPVFETMANK
Ga0182139_11223991	3300015346	Miscanthus Phyllosphere	MIGFNLSTNYIEDPEALIRKTRAKLKKVSALKSEDNHIRRSLTPEFEAMANRTL
Ga0182139_11956121	3300015346	Miscanthus Phyllosphere	MTGFDLPTNFVEDPKALLKRTRAKLKKVSALESEDNQIRQSLTPEFEAMANKTLCEFSAPTT
Ga0182139_12432791	3300015346	Miscanthus Phyllosphere	MTGFDLLINYVEDPEALIRRTKAKLKKVLVSESEDNQTGHSLTPVFEAMAN*
Ga0182161_12250502	3300015351	Miscanthus Phyllosphere	MTSFDLPTNYVDDPKALLKRTKAKLKKVLALGSKDNQIRRSLTPEFEAMADKTPRILCSNYGQHL*
Ga0182159_11710281	3300015355	Miscanthus Phyllosphere	MTGFDLPTNYFEDLEALFRRTKAKLKKVSALESKDNQTRHSLTPVYEGMTDKTL*
Ga0182159_13224541	3300015355	Miscanthus Phyllosphere	MTGFDLPTNYVDYPEALLERTKAKLKKVLALESKDNHIRPSLTPEFEAMADKTLHEFSAPTTAN
Ga0182145_10572041	3300015361	Miscanthus Phyllosphere	MTSFDLPKNYIEDLEALFRRTKVKLKTVSTSESEDNQIRRSLTLVFEAMANKTLREFSDP
Ga0182203_11331231	3300017404	Miscanthus Phyllosphere	MTCFDLPTNYIEDLEALIRRTKAKVKKVSALESEDNQIRRSLTPEFEIMANKT
Ga0182220_10092861	3300017407	Miscanthus Phyllosphere	MTGFDLPTNYVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR
Ga0182204_10004671	3300017409	Miscanthus Phyllosphere	MTSFDLPTNYVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR
Ga0182207_10071922	3300017410	Miscanthus Phyllosphere	MTGFDLLTNYVDDLGALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR
Ga0182207_10963352	3300017410	Miscanthus Phyllosphere	MTGFDLPTNFIEDLEALFKRTKAKLKKVLALESKDSQTRHSLTSVFEAMTDKTL
Ga0182207_11102251	3300017410	Miscanthus Phyllosphere	MTGFDLPTNYVEDPEALLRRTKAKFKKVLALESEDNQIKXSLTLEFEAMANKTLCDLSAPTTANILSHLILRIK
Ga0182208_10017943	3300017411	Miscanthus Phyllosphere	MTGFDLLTNYIDDPEALLKRTKSKLKKVLALESEDNQIRRSLTPEFEAR
Ga0182208_10555482	3300017411	Miscanthus Phyllosphere	MTSIDLLTNYVDDLEALLRRTKAKLKKVXALESEDNQIKRSLTPK
Ga0182222_10250241	3300017413	Miscanthus Phyllosphere	MTGFDLLTNYVEDLEALIRRTKAKLKKVLALESEDNQTRRSLTPVFEAMVDKTLHEA
Ga0182222_10997902	3300017413	Miscanthus Phyllosphere	MIGFHLPTYNVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR
Ga0182202_10093571	3300017415	Miscanthus Phyllosphere	MTGFELSTNYVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR
Ga0182202_10459251	3300017415	Miscanthus Phyllosphere	MIGFDLPTNYIDDPEALIRRTRAKLKKVLVLELEDNQIRWSLTLEFEAKANKTLHEFSAPTIANI
Ga0182202_10750492	3300017415	Miscanthus Phyllosphere	MTGFDLATNYIDNPEALLKRTKTKLKKVSALESEDNQTRRILTPLFEAKADKTLC
Ga0182202_11220601	3300017415	Miscanthus Phyllosphere	MTGFDLPTNYVDNPEALLKRTRAKLKKVSALESEDNQIRXSLTPEFEAMADKTLHEFS
Ga0182230_10482731	3300017417	Miscanthus Phyllosphere	MTGFDLPTNYIEDLEALIRRTRAKLKKVPALKSEDNHIRRSLTPEFEAMANRTP
Ga0182219_10903781	3300017424	Miscanthus Phyllosphere	MTSFDLSTNYVDDSEALLRKTKAKLKKVSTLESEDNQIRQSLTPEFEAMANKTP
Ga0182224_10367411	3300017425	Miscanthus Phyllosphere	LTGFDLPKNYVEDLETLFSRTKAKIKKVSALESEDNQTRRSLTPVFEA
Ga0182224_10497641	3300017425	Miscanthus Phyllosphere	MTGFDLPTNYVEDPEALIRRTRAKLKKVSTLESEDNQTRWSLTPEFEAMVDKTL
Ga0182224_11388251	3300017425	Miscanthus Phyllosphere	MTSFDLPKNYVEDPEALIRRTKAKLKKLLASEVEDNQTRRILTPVFEAMADKTFREFS
Ga0182190_10567961	3300017427	Miscanthus Phyllosphere	MTGFDLLTNYVDDLEALLKRTKAKLKKVSALLSEDNQIRR
Ga0182190_10830481	3300017427	Miscanthus Phyllosphere	MTGFDLPTNCIEDLEALIRRTRAKLKKVSALESKDNEIRHSLTPEFEAMANKAT
Ga0182192_11448401	3300017430	Miscanthus Phyllosphere	MTGFDLLTNYVEDPEALIRRTRAKLKKVSALESEDNQTRXSLTPVFE
Ga0182206_10841611	3300017433	Miscanthus Phyllosphere	MAGFDLPTDYVEDLEALFRRTKAKLKKVAALELEDNKTRLGLTPVFEA
Ga0182206_10893671	3300017433	Miscanthus Phyllosphere	MTSFDLPTNYIENLEALLRRTKAKLKKFLAFESEDKQIRQSLTLVFDAMANKTP
Ga0182209_10199641	3300017436	Miscanthus Phyllosphere	MTSFDLPTNYIENLEALLRRTKAKLKKFLAFESEDNQIRQSLTLVFDAMANKTP
Ga0182191_10864492	3300017438	Miscanthus Phyllosphere	MTGFDLLTNHVEDPEALIRRTRAKLKKVLVSESEDNQTGHSLTPVFEAMAN
Ga0182191_11268131	3300017438	Miscanthus Phyllosphere	MTGFDLSTNYVEDPEALIRRTRAKLKKVPALKSEDNHIRXSLTPEFE
Ga0182191_11491781	3300017438	Miscanthus Phyllosphere	MTGFDLLTKYIDDLEALLKRTKAKLKKLLALESEDKKIRXSLTPEFEAMAN
Ga0182221_10154941	3300017442	Miscanthus Phyllosphere	LTNYIDDPEALLKRTKSKLKKVLALESEDNQIRRSLTPEFEAR
Ga0182193_10238111	3300017443	Miscanthus Phyllosphere	CMTGFDLPTNYVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR
Ga0182193_10739012	3300017443	Miscanthus Phyllosphere	MTGFDLPTNYVDDPEALLKRTNFKLKKVLALESKDNHIRRSLTLEFETMADRTLC
Ga0182193_11410091	3300017443	Miscanthus Phyllosphere	MTGFDLLTNYVDDPKALLKRTKAKLKKVSALESEDNQIRRSLTPEFEAMADKTLCEFSAPTSTNMVLSSS
Ga0182193_11410181	3300017443	Miscanthus Phyllosphere	MTGFDLPKNYIEDPKALFRRTKAKLKKVLASEAEDNQTRHSLTPV
Ga0182233_10758421	3300017680	Miscanthus Phyllosphere	MTSFDLPTNYIENLEALLRRTKAKLKKVLALESEDNQTRQSLTPVFKAMADK
Ga0182229_10868001	3300017682	Miscanthus Phyllosphere	MTSFDLSTNYIENPEALLRRTKAKLKNVSALESEDIQTRSSLTPIFEAMADK
Ga0182218_10626621	3300017683	Miscanthus Phyllosphere	MTSFDLLTNYVDDPKALLKRTKAKLKKVLALESKDNHIRQSLSLEFEAMTDRTLHEF
Ga0182225_11373141	3300017684	Miscanthus Phyllosphere	MTDFDLLTNYVEDPEALIRKTRAKLKKVSALKSEDNHIRRSLTPEFEAMANRTLREF
Ga0182227_10726871	3300017685	Miscanthus Phyllosphere	MASFGLLTDYVEDSEALFRRTKAKLKKVLALESKDNQTRCSLTPIFEAMVDKTLHEFSAT
Ga0182227_11107651	3300017685	Miscanthus Phyllosphere	MAGFDLPTNYVEDPEALIRRTRAKLKKVPALKSEDNHKRQSLTPKFEAMANRTP
Ga0182227_11305901	3300017685	Miscanthus Phyllosphere	MTCFDLSTNYVDYLEALLKRTKAKLKKVSVLESEDNHIRRSITPEFEAMVDRTLH
Ga0182205_10761631	3300017686	Miscanthus Phyllosphere	MTGFDLPTNYIEDLEALIRRTRAKLKKASALELEDNQTKRSLTLVFEAVADKTLREFSTPTM
Ga0182232_10268481	3300021060	Phyllosphere	MTDFDLLTNYVDDPEALLKRTKAKLKKVLALESEDNQIRRSLTPEFEAR
Ga0207675_1018374951	3300026118	Switchgrass Rhizosphere	MTGFDLLTNYIEDPEALIRRTRAKLKKVLVSKLEDNHIRXSLTPEFEAM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096342

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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