NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096341

Metagenome Family F096341

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096341
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 75 residues
Representative Sequence MAASTVKICSRKKGKANGPSKLEKILLGYYIRLRPRSEESRVYLGIKRLRRGKQVNRNFGIKSFLSQNWGACVYTKI
Number of Associated Samples 56
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 90.91 %
% of genes near scaffold ends (potentially truncated) 9.62 %
% of genes from short scaffolds (< 2000 bps) 10.58 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (95.192 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(96.154 % of family members)
Environment Ontology (ENVO) Unclassified
(97.115 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(97.115 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.24%    β-sheet: 0.00%    Coil/Unstructured: 64.76%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A95.19 %
All OrganismsrootAll Organisms4.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300015268|Ga0182154_1041185Not Available594Open in IMG/M
3300015302|Ga0182143_1023230Not Available780Open in IMG/M
3300015314|Ga0182140_1085023Not Available555Open in IMG/M
3300015322|Ga0182110_1059315Not Available634Open in IMG/M
3300015346|Ga0182139_1188966All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum557Open in IMG/M
3300015346|Ga0182139_1244804All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum502Open in IMG/M
3300015355|Ga0182159_1270765Not Available563Open in IMG/M
3300015361|Ga0182145_1112651All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum604Open in IMG/M
3300017413|Ga0182222_1060126All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum587Open in IMG/M
3300017430|Ga0182192_1103554Not Available602Open in IMG/M
3300025935|Ga0207709_11384955All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum582Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere96.15%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015268Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015283Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015285Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015287Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015291Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015294Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015299Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015303Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015305Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015321Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017409Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017417Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017424Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017430Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017680Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017682Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017686Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017689Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300021060Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0157378_1230547833300013297Miscanthus RhizosphereTASAVKVGSRKEKVNRPSELEEILLGCYIKLGSGSQESCVYLGIERLRRGKPISWNFWNKTILSQNWGACVYTKIWEKERGNS*
Ga0157378_1308714413300013297Miscanthus RhizosphereMAASTVKICSRKKGKANGPSELEKILLGYYIRPRPGSQESCVYLRIEWLWCRKQINMNFGIK*
Ga0182154_101349513300015268Miscanthus PhyllosphereMAASVVKICSRKKGKANGPSELEKILLGYYIRLGPRNQESRIYLGIKRLRRGKQVNRNFGIKSFLS*
Ga0182154_104118523300015268Miscanthus PhyllosphereMTASAVKVGSRKKEKAKRPSELEEILLGYYIKLEPGSQESCVYLGIERLQRRKQINRNFGIKSLLSQNWGACVYTKILEKNAVAQRLPRLCRS
Ga0182154_104696813300015268Miscanthus PhyllosphereMAALAVEICSRKKGKANRLSEPEKILLGHYIRLGPGSQESRVYLGAKQLRRGKQINRNFRIKSFHPKIGGHVF
Ga0182113_103215913300015269Miscanthus PhyllosphereVASAVRMCSGKKGKANGPSELGKILLGYYIKLGLGSQESRVYLGTKRLRCGKWINRNFGIKSFLSQNWGPCVYTEILEEERGN*
Ga0182113_105668713300015269Miscanthus PhyllosphereMTASDVKICSRKRGKANRSSKLEEILLGYYIKLKPVSKESCVYLGIERLRCGKQINRNFGIKSLLSQNWG
Ga0182172_102456313300015275Miscanthus PhyllosphereMAASAVEICSSKKGKANRPSESEKMLLGHYIRLGLGSQDSRVYLGAKRLWRGKQINRNFGIKSLLSQNWGACVYTKI*
Ga0182172_107565213300015275Miscanthus PhyllosphereVKALAVAALAVEVCSRKKGKVSRPSELEMILLGYCIEFGPRSQELRVYLRIKRLRRGKQVNRNFEIKTFLSQNWGACVYTKI*
Ga0182160_102180823300015281Miscanthus PhyllosphereMVTSAVKICSRKKGKANGMSELEKILLGYYIRLGPRNQESRVYLGIKRLRRGKQVNRNFGIKSFLSQNWGACVYTKIWEEERGNTKLLRLCQSRNRLHK
Ga0182124_107013713300015282Miscanthus PhyllosphereMTALDIKICSRKREKAKRPSELEEVLLGYYIKLRPGSHESRVYLGVERLRCGKWINMNFGIKSLLSQNWGACVYTKI
Ga0182156_105734813300015283Miscanthus PhyllosphereMASAVKICSRKEKANEPNELEKILLGYYIRLGPGSQESRVYLGIKRLRRGKQENRNFGIKSFLS*
Ga0182186_103107813300015285Miscanthus PhyllosphereMMASDIKVCSRKRGKANRPSELEEVLLGYYIKLRLGSQGSCVYLRIERLRCGKRINRNFQIKSLL
Ga0182186_104220813300015285Miscanthus PhyllosphereMVTSAVMICSRKKRKANGPSELEKILLGYYIRLGPRNQESRVYLGIKRLRRGKQVNRNFEIKSFISQNWGACVYTKFWEEKRG
Ga0182176_103753713300015286Miscanthus PhyllosphereMAALVVKICSRKKGKANGSSELEKILLGYYIRLGPRNQESHVYLGIKWLRRGKQVNKNFGIKSFLSQN*
Ga0182171_103219923300015287Miscanthus PhyllosphereMAVSAVRICSRKKGKANRPSKLEELLLGYYIKLRPGSQESRVYLGIEWLRRGKQINR
Ga0182171_107858813300015287Miscanthus PhyllosphereMTASDVKICSRKKGKANRPSELKEILLGYYIKLGLGSQESCIYSEIERVRQGKRINRNFGIKSLLC*
Ga0182138_105056123300015289Miscanthus PhyllosphereMAALIVKICSRKKGKANGPSKLEKILLGYYIILEPRNLESRVYLGIKRLRRGKQVNRNFEIKSFISQNWGACVYTKIWEEERET*
Ga0182125_109267923300015291Miscanthus PhyllosphereMAASTVEICLRKKGKANGPSKLEKILLGYYIRLRLGSQESRLYLRIKWLRRGKQVNRNFGIKLFLS
Ga0182126_103528713300015294Miscanthus PhyllosphereMSALVVKICSRKKEKANGSSKLEKILLGYYIRLGPRSQESRVYLRIKRLRRGKQVNRNFGIKSFL
Ga0182126_105370513300015294Miscanthus PhyllosphereMAASAVKICSRKKGKANGPSELEKILLGYYIRLGPRNQGSRVYLGIKRLRRGKQVNRNFGIKSFLSQNWGACVYTKIWEGERGNSKIPRLCQSR
Ga0182126_107030713300015294Miscanthus PhyllosphereMAASAVKICSRKKVKANRLSKLENMLLGYYIRLGLESQESRVYLRIKRLWRGKQINRNFGIKSFLYQNWGHVFTPKF
Ga0182157_103745813300015296Miscanthus PhyllosphereMTASDVKICSRKRGKENRSSKLEEILLGYYIKLDTGSQEPCVYLEIEQLRCGKQINRNFRIKSLLSQN*
Ga0182157_110261213300015296Miscanthus PhyllosphereMTVSDIKICSRKREEAKRPSELEEVLLGYYIKLKPVSKESCVYLGIERLRCGKQINRNFGIKTLLSQNWEACFYTKI*
Ga0182107_103318713300015299Miscanthus PhyllosphereVKAASAVKICSRKKGKENRPSELEKVLLGYYIKLRPGSQGSCVYLRIKQLRCGKQENRNFEIKSSLSQN*
Ga0182107_108142013300015299Miscanthus PhyllosphereMMASAVKVCSRKRKKGKRLSELEEVLLGQYIRLGLGSQDSCVYLEAKRLRRDKQISRNFGIKLLLSQDWGACVYTKI*
Ga0182108_103961413300015300Miscanthus PhyllosphereMTASAVKVGSRKEKANRPSELEEILLGCYIRLGPGSQESRVYLGIGRLRCGKRINRNFGIKSLLSQNWGA*
Ga0182143_102323023300015302Miscanthus PhyllosphereMMASDIKICSRKKAKRPSELEEVLLGYYIKLGPRSQESCIYLGIERLQRGKRINRNFGIKSLLSQNWGACVYTKI*
Ga0182143_108350113300015302Miscanthus PhyllosphereMTASAVKVGLRRKERPNRTSESEKILLGHYVRFGLGSQDSHVYLGAKWLRRGKWMNSNFGIKSLLS*
Ga0182143_109093113300015302Miscanthus PhyllosphereVKAASTVKICSRKKGKANRPSKLENMLLGYYIRLGLGSQESRVYLGIKRLRHGKQINRNFGIKSFLSQNWGACVYTKIWGEERGNSK
Ga0182123_107756413300015303Miscanthus PhyllosphereMAVLVVKICSRKKGKTNGPSELEKILLGYYIRLGPRNQESRIYLEIKRLRRGKQVNRNFGIKSFLSQN*
Ga0182158_102018413300015305Miscanthus PhyllosphereMAVAAVKICLKKKGKARQPSELEKILLGYYIRLELGSQESCVYLRIKWLWRGKQINRNFGIKSFLSQN*
Ga0182158_107703413300015305Miscanthus PhyllosphereMTASDVKICSRKKGKANRLSELEEILLGYYIKLRPGSQKSCIYLGTEWLQRGKRIHKNFEIKLFLS*
Ga0182144_110979513300015307Miscanthus PhyllosphereMAASAVEIFSRKKGKANRPSESKKILLGHYIRLGPRSQESRVYLGAKQLRRGKQINRNFGIKSFLSQN*
Ga0182140_104233123300015314Miscanthus PhyllosphereMSALVVKICSRKKGKANRASKLENTLLGYYIRLGLRSQESRIYLEIEQLWRGKQINKNFGIK
Ga0182140_106494913300015314Miscanthus PhyllosphereMTASDVKICSRKRGKANRPSKLEEILLGYYIKLRPGSQESCVYLRIEQLRHGKQINRNFGIKSLLSQNWGACVYTKIWEKN
Ga0182140_108502323300015314Miscanthus PhyllosphereLAMAASAVEICSSKKGKANRPSESEKMLLGHYIRLSPGSQDSRVYLRAKRLRCGKWINRNFRIKSLLSQNWGHVFTPKFGEK
Ga0182127_106753113300015321Miscanthus PhyllosphereVATSAVKICLRKKGKANGPSKLENILLGYYIRLRPRNQESRIYLEIKRLRRGKQVNRNFGIKSFLSQNCGACVYTKIWKEEHWNSKL
Ga0182110_105931523300015322Miscanthus PhyllosphereLAMAASAVKICSRKKGKANGLSELEKILLGYYIRLGPRNQESRVYLGIKRLRRGKQVNRNFEIKSFLSQNWGACVYTKIWKEERGNSKPPRLCKSRN
Ga0182129_105961823300015323Miscanthus PhyllosphereMAASAVKICLRKKGKANKPCELEKILLGYYIRLGLGSQESRVYLGIKRLQRGKQINRNFGIKSFLSQNWG
Ga0182187_105159513300015341Miscanthus PhyllosphereVASADNICSRKKGKENGPSKLEKILLGYYIRLGPRNQESRVYLGIKRLRCGKQVYRNFGIKSFLSQNWGACVYTKIWEEERGNSKLPI*
Ga0182187_109057823300015341Miscanthus PhyllosphereMIVSDIKICSRKRGKANGPSELEEVLLGYYIKLRPGSQESCVYLGIERLRCGKRINRNFGIKSLLSQN
Ga0182187_112271613300015341Miscanthus PhyllosphereMAVLAVKICSRKKGKANGPSELEKILLGYYIRLRPRSQELRVYLRIKRLRRGKQVNRNFEIKTFLSQNWG
Ga0182187_114974913300015341Miscanthus PhyllosphereMAVSAVKICSRKKGKANGPRDLEKIQLGYYIRLVPGSQESRIYLGIKRLRRGKQENSNFGIKSFLSQNWGAFVYTKIWEE*
Ga0182155_108354113300015343Miscanthus PhyllosphereMAASVVKICSRKKGKANEPSEMEKILLGYYIKLRPGSQESRIYLRTKRLRHVKQINMNFGIKLFLSQNLGACVY
Ga0182189_112568913300015344Miscanthus PhyllosphereMAASAIEICSRKKGKANRPSESEKILLGHYIRLGLGSQESRVYLEAKWLRLSRQINRNFGIKSLLSQNWGA
Ga0182189_122621713300015344Miscanthus PhyllosphereMSALVVKICSRKKGKANGPSELQKILLGYYIRLRLRNQESHIYLGIKWLRRGKQVNRNFGIKSFLSQN
Ga0182111_121646813300015345Miscanthus PhyllosphereMASLAVEICSNKKGKSNRPSESEKMLLEHYIRLSPGSQDSRIYLGAKRLRHGKQISRNFEIKSLLSQNWGACVYTKIWREKRRNSKLPKS
Ga0182111_123137613300015345Miscanthus PhyllosphereVKAASTVKICSRKKGKANRPSKLENMLLGYYIRLGLGSQESRVYLEIKRLRHGKRRKRNFRIKSFLSQN*
Ga0182111_123543813300015345Miscanthus PhyllosphereMVASAVRICSRKKGKANGLSELEKILLGYYIKLRPESQESRIYLGTKRLRHGKQINMNFGIKLFLSQNLGACVYTKIWEEKCGNSKLP
Ga0182139_109062013300015346Miscanthus PhyllosphereVAASAVEVCSRKKGKANRPSESEKILLGHYIRLGPGSQESRVYLGAKWLRRGKQINRNFGIKSLLSQNWGACVYTKI*
Ga0182139_110551723300015346Miscanthus PhyllosphereVKAVSAVKICSRKKGKANRLSKLERMLLGYYIRLGPGSKGSRMYLEIKWLRRGKQINRNLGIKLFYPKIRG
Ga0182139_112495723300015346Miscanthus PhyllosphereMSASDVKICSRRRGKANRSSELEEVLLGYYIKLRPGSHESRVYLGVERLRCGKRINRNFRIKSLLSQNWGACIYTK
Ga0182139_117210113300015346Miscanthus PhyllosphereMAASAVRICLRKKGKANGPSELEKILLGYYIRLRLGSQESHVYLGIKQLRHGKQINRNFGIKSFLSQNWG
Ga0182139_118896623300015346Miscanthus PhyllosphereMKASNIKICSMRRGKANRPSELEEVLLGYYIKLRPVSQESCVYLGIEWLRCGKRVNRNFGIKSLLSQNWEACVYT
Ga0182139_124480413300015346Miscanthus PhyllosphereMTASDIKICSRKRGKANGPSELEEVLLGYYIKLKPGSQESCVYLRIERLWYGKQINRN
Ga0182177_105826713300015347Miscanthus PhyllosphereMTASDIKICSRKKGKANGSSELEDVLLGYYIKLRPESQKPCVYLRIERLRCGKRINRNFGIKSLLSQNWGACVYTKI*
Ga0182159_114917123300015355Miscanthus PhyllosphereLAIAASAVEICSRKKGKANRPSESERILLGHYIRLSPGSQDSRIYLGAKRLQRGNQINKNFRIKSLLSQNWGA
Ga0182159_127076533300015355Miscanthus PhyllosphereMTASAVKVGLRRKGKANRPSESEKILLGHYVRFGPRSQDSRIYLGAKRLRHGKQINRNFGIKSLLSQNWGACVY
Ga0182159_129575313300015355Miscanthus PhyllosphereMTASTVKICSRKKEKANRLSGLEEILLGYYIRLGPGSQESCAYLRIERLRRGKQINMNFGIKSFLSQNWGAFVYTRIW*
Ga0182159_133676313300015355Miscanthus PhyllosphereMVASAVKICLRKKGKANGPSELEKILLGYYIRLGPKSLELRVYLGIKWLRHGKQVNRNFGIKSFLSQNWGACVYSKIWEEERGNSKLPRSCQSRNRLHKD*
Ga0182159_135117013300015355Miscanthus PhyllosphereMVASAIKICSRKKGKANGLTELKKILLGYYIRLGPRNQESRIYLRIKRLRRGKQVNRNFGIKSFLSQNWGACVYTKIWEE
Ga0182145_111265123300015361Miscanthus PhyllosphereLGRGFARVEALAMAASAVKICLRKKGKANGPSELEEILLGYYIRLRPGSQESRVYLGIKQLRCGKQINRNFEIKSFLSQNWGACIYTKIWKEERGNSKLPRL
Ga0182145_112636223300015361Miscanthus PhyllosphereVKAASAVKICSRKKGKANRPSKLEKMLLGYYIRLGPRSQESRVYLGTKRLRCSKHINRNFGTKSFYPKIGGH
Ga0182203_109740313300017404Miscanthus PhyllosphereMAVSAVKICSRKKGKANGLSKLEKILLGYYIRLGPRSQESRVYLRIKWLRRGKQVNRNFGIKLFLSQNW
Ga0182220_104169413300017407Miscanthus PhyllosphereMTTLNIKICLRKRGKANRPSELEEVLLGYYIKLRPGSQESCVYLGIERLRCGKRINRNFGIKSLLSQNW
Ga0182204_106669213300017409Miscanthus PhyllosphereMTASDIKICSRKREKAKRPSELEVVLLGYYIKLRPGSQGSCVYLGIERLQRGKRINRNFKIKSLLSQNWGACV
Ga0182207_103972323300017410Miscanthus PhyllosphereMTASDIKICIRKREKAKRPSELEVVLLGYYIKLRPGSQKSCVYLGIEWLRRGEQINRNFGIKSLLSQNWGACVYTKI
Ga0182207_112109013300017410Miscanthus PhyllosphereMTASDVKICSRKRGKANRPNKLEEILLGYYIKLRLGSQESCVYLEIERLRRGKQINRNF
Ga0182208_106731513300017411Miscanthus PhyllosphereMTASDVKICSRKRGKANRPSKLEEILLGYYIKLKLGSQESCVYLEIERLWHGKQINRNFGIKSLLSQNWGACVYTKIWEKNAGI
Ga0182208_111646513300017411Miscanthus PhyllosphereLAMATSAVEICSRKKGRANKLSESEKILLGHYIRLGPESQESRVYLRAKQLRRGKQINRNFGIKSLLSQNWRACVYTKILRENAGTR
Ga0182222_106012613300017413Miscanthus PhyllosphereMAASAVKICSRKKRKENGPSELEKILLGYYIRLGPRSQESHVYLGIKWLRRGKQINKNFGIKSFLSQNWGACVYTKI
Ga0182202_108786913300017415Miscanthus PhyllosphereMTASTVKICSRKKEKANRLSGLEEILLGYYIRLGPGSQESRVYLGIKWLRRGKQINMNFRIKSFLSQNWGACVYTKIWEEERGDLKLPKMCRSR
Ga0182230_108544513300017417Miscanthus PhyllosphereMAASVVKICSRKKGKANGPSELEMILLGYYIKLGPRNQESRVNLKIKWLQGGKNMNRNFGIKSVLSQNWGGGA
Ga0182219_108096423300017424Miscanthus PhyllosphereLAIAASAVEICARKKGKANRPSESERILLGHYIRLGLGSQESRVYLGAKRLRHGKQISRNFGIKSLLSQNWGGACVCTKIWREKRG
Ga0182219_113108313300017424Miscanthus PhyllosphereMAASAVEICSRKKGKANRPSESEKILLGHYKRLGSRSQESHVYLEAKRLRHGKQINKNFGIKSLLSQNWGACVYTKIWRE
Ga0182219_113898313300017424Miscanthus PhyllosphereMAASAVKIYSRKKGKANGPSELEKILVGYYIRLRPRNQESRVYLGIKRLRRGKQVNRNFGIKSFLSQNCGACVYTKIWEEERGN
Ga0182224_101973233300017425Miscanthus PhyllosphereMAASAVEICSRKKGKANRPSESEKILLGYYIRLGPESQESRVYLEAKRLWRGKQINRNFGIKSLLSQNWG
Ga0182224_107996213300017425Miscanthus PhyllosphereMTVSAVKVGLRRKEKANRPSGSEKILLGHYVRFGPRSQDSRVYLGAKRLRHGKRINRYFRIKSLLSQNWG
Ga0182224_115108313300017425Miscanthus PhyllosphereMAASSVKICSRKKGKANGLTKLKKILLGYYIRLEPGNQESRVYLRIKRLRRGKQVNKNFEIKSFLSQNWGACVYTKI
Ga0182224_115715413300017425Miscanthus PhyllosphereICLRKKGNANRPSESEKTLLGHYIRLGPRSQESRIYLGAKRLRRGKQINMNFGIKSLLSQNWGACVYTKIWREKRGNSKLPKLC
Ga0182192_110355423300017430Miscanthus PhyllosphereMMASDVRICLRKKGKANRPSELEKILLGYYIKFRPGSQESCIYLGIEWLRRGKQINRNFVIKTLLSQNWRTCVYTKIWRE
Ga0182192_116166613300017430Miscanthus PhyllosphereMKASNIKICSMRRGKANRPSELEEVLLGYYIKLRPGSQESCVYLRIERLRCGKRINRNF
Ga0182206_107382523300017433Miscanthus PhyllosphereVKICSRKKRKANRPSELEKILLVYYIKLGPRNQESRIYLGIKWLRHGKQVNRNFEIKSFVSQN
Ga0182206_111186013300017433Miscanthus PhyllosphereMAVLVVKICSRKKGKTNGPSELEKILLGYYIRLGPRNQESRVYLGIKRLRRGKQVNRNFGIKSFLSQNWGACVYTKI
Ga0182209_111099813300017436Miscanthus PhyllosphereLAMAASAVEICSRKKGKANRPSESEKILLGHYIRLSLGSQDTRVYLGAKQLRHGKQINRNFGIKSLLSQNWGACV
Ga0182209_115390323300017436Miscanthus PhyllosphereMTASAVEVGSREKEKAKRPSELEEILLGCYMRLGPGSQELCVYLGIERLRRGKQINRNFGIKSLLSQNWGACVYTKIWRE
Ga0182191_112136113300017438Miscanthus PhyllosphereMAASVVKICSRKKGKANGPSELEKILLGYYIRLGPRNQESRVYLGIKRLRRGKQVNMNFEIKLFLSQN
Ga0182191_113589613300017438Miscanthus PhyllosphereLAMAASTVKICSRKKGKANGPSELEKILLGYYVRLVPESQESHVYLGTKRLRCGKQINRNFGI
Ga0182193_105955113300017443Miscanthus PhyllosphereMAASAVKIYSRKKEKANMSSELERILLRYYIRLGPRNQGSRVYLGIKRLRRGKQVNRNFGIKSFLS
Ga0182193_108884423300017443Miscanthus PhyllosphereMMASDVRICLRKKGKANRPSELEKILLGYYIKFRPGSQESCIYLGIEWLRRGKQINRNFGIK
Ga0182233_109580013300017680Miscanthus PhyllosphereMAALAVRICSRKKGKANRPSKLEEILLGYYIRLRLRSQESCVYLRIEWLWCGKQINMNFGIKSFLSQNQGMCLHQNLVQEERTP
Ga0182229_107363113300017682Miscanthus PhyllosphereMAASTVKICSRKKGKANGPSKLEKILLGYYIRLRPRSEESRVYLGIKRLRRGKQVNRNFGIKSFLSQNWGACVYTKI
Ga0182218_102862513300017683Miscanthus PhyllosphereMAASVVKICSRKKGKANRPSESKKILLGHYIRLSPGSQDSHVYLGAKWLRRGKQINRNFGIKLLLSQNWGACVYTKIWREECGSSKASKIMPIKESIT
Ga0182218_108660823300017683Miscanthus PhyllosphereMTMSDIKIWSRKRGKANGPSELEEVLLGYYIKLRQGSQESCVYLGVERLRCGKRINRNFRIKSLLSQNWG
Ga0182218_114724113300017683Miscanthus PhyllosphereMTASDIKICSRKRGKANRPSELEEVLLGYYIKLRPKSQESCVYLGIERLRCGKRINRNFGIKSRLFQNWGAC
Ga0182225_106582113300017684Miscanthus PhyllosphereKANGSSKLEKILLGYYIRLRPRSQESRVYLGLKQLRHGKQVNRNFGIKLPLSQNWAACVYTKIWEEERGNS
Ga0182227_105449513300017685Miscanthus PhyllosphereMAASAVEICSRKKGKANRPSELKKMLLGHYIRLSPGSQEPHIYLGAKRLRRGKQINRNFGIKSLLSQNWGA
Ga0182227_106362913300017685Miscanthus PhyllosphereMTASDIKICLRKREKAKRPSELEEVLLGYYIKLRPGSQESCVYLGIERLRCGKRINKNFGIKSLLSQNWGVCVTPKFGRRTWEF
Ga0182205_103996613300017686Miscanthus PhyllosphereMAVSAVKICLRKKGKANGPSELEKILLGYYIRLGPKSLELRVYLGIKWLRHGKQVNRNFGIKSFLSQNWGACVYSKIWEEERG
Ga0182205_108189413300017686Miscanthus PhyllosphereMTASAVKVGLRRKERANWPNESEKILLGHYVRFSPGSQDSRVYLRANRLRHGKRINRNFGIKSLLSQNWGAC
Ga0182231_108311113300017689Miscanthus PhyllosphereMAVSAVEICSRKEGKANRPSELEKILLGHYIRLGPGSQESRVYLGAKQLRRGKQINRNFRIKSFHPKIG
Ga0182232_107625223300021060PhyllosphereMTASNVKICSRKRGKANRPSESEKTLLGHYIRLGPGSQDSRVYLGAKRLRRGKQINRNFGIKSILSQNWGAC
Ga0207709_1138495523300025935Miscanthus RhizosphereMAASAVRIYSRKKGKANGPSELEKILLGYYIRLRPGSQESRVCFGIKRLRRGKQINRNFGIKSFLSQNWRACVYTKIWEEERGN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.